data_1QJ7 # _entry.id 1QJ7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.294 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1QJ7 PDBE EBI-2857 WWPDB D_1290002857 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1QJ1 unspecified . PDB 1QJ6 unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QJ7 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 1999-06-22 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jhoti, H.' 1 ? 'Cleasby, A.' 2 ? # _citation.id primary _citation.title 'Crystal Structures of Thrombin Complexed to a Novel Series of Synthetic Inhibitors Containing a 5,5-Trans-Lactone Template' _citation.journal_abbrev Biochemistry _citation.journal_volume 38 _citation.page_first 7969 _citation.page_last ? _citation.year 1999 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10387040 _citation.pdbx_database_id_DOI 10.1021/BI9830359 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jhoti, H.' 1 primary 'Cleasby, A.' 2 primary 'Reid, S.' 3 primary 'Thomas, P.' 4 primary 'Weir, M.' 5 primary 'Wonacott, A.' 6 # _cell.entry_id 1QJ7 _cell.length_a 71.400 _cell.length_b 72.100 _cell.length_c 72.800 _cell.angle_alpha 90.00 _cell.angle_beta 100.70 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QJ7 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat THROMBIN 4096.534 1 3.4.21.5 ? 'ALPHA THROMBIN, RESIDUES 328-363' ? 2 polymer nat THROMBIN 29780.219 1 3.4.21.5 ? 'ALPHA THROMBIN, RESIDUES 364-622' ? 3 polymer syn HIRUGEN 1363.399 1 ? ? 'PEPTIDE FRAGMENT OF HIRUDIN' 'EXOSITE INHIBITOR OF THROMBIN' 4 non-polymer syn '6-CARBAMIMIDOYL-2-[5-(3-DIETHYLCARBAMOYL-PHENYL)-2-HYDROXY-INDAN-1-YL]-HEXANOIC ACID' 465.585 1 ? ? ? ? 5 water nat water 18.015 208 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'FACTOR II' 2 'FACTOR II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR A ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; B ? 3 'polypeptide(L)' no yes 'DFEEIPEE(TYS)L' DFEEIPEEYL I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 ASP n 3 2 PHE n 3 3 GLU n 3 4 GLU n 3 5 ILE n 3 6 PRO n 3 7 GLU n 3 8 GLU n 3 9 TYS n 3 10 LEU n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? HUMAN 'HOMO SAPIENS' 9606 ? ? ? 'BLOOD PLASMA' ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? HUMAN 'HOMO SAPIENS' 9606 ? ? ? 'BLOOD PLASMA' ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HIRUDO MEDICINALIS' _pdbx_entity_src_syn.organism_common_name 'MEDICINAL LEECH' _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN 1 ? ? P00734 ? 2 UNP THRB_HUMAN 2 ? ? P00734 ? 3 UNP ITHA_HIRME 3 ? ? P28501 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1QJ7 A 1 H 36 ? P00734 328 ? 363 ? 1 15 2 2 1QJ7 B 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 1QJ7 I 1 ? 10 ? P28501 55 ? 64 ? 55 64 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GR1 non-polymer . '6-CARBAMIMIDOYL-2-[5-(3-DIETHYLCARBAMOYL-PHENYL)-2-HYDROXY-INDAN-1-YL]-HEXANOIC ACID' GR179849 'C27 H35 N3 O4' 465.585 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1QJ7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_percent_sol 52.92 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'CRYSTALS WERE GROWN BY MACROSEEDING A SOLUTION OF 100MM HEPES PH 7.0, 22% PEG4K, 200MM NACL. PROTEIN CONCENTRATION OF 5MG/ML.' # _diffrn.id 1 _diffrn.ambient_temp 290.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'BRUKER NONIUS' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MONOCHROMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ENRAF _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1QJ7 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.200 _reflns.number_obs 18523 _reflns.number_all ? _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05900 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.300 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1QJ7 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18523 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF 10000000.000 _refine.pdbx_data_cutoff_low_absF 0.0010 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 98.0 _refine.ls_R_factor_obs 0.187 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.187 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2474 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 208 _refine_hist.number_atoms_total 2715 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.00 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1QJ7 _struct.title 'Novel Covalent Active Site Thrombin Inhibitors' _struct.pdbx_descriptor 'THROMBIN (E.C.3.4.21.5), HIRUGEN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QJ7 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;HYDROLASE-HYDROLASE INHIBITOR COMPLEX, BLOOD COAGULATION-INHIBITOR COMPLEX, PROTEINASE, BLOOD COAGULATION, TRYPSIN LIKE PROTEINASE, PROTEASE-INHIBITOR COMPLEX, HYDROLASE- HYDROLASE INHIBITOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE A 7 SER A 11 5 ? 5 HELX_P HELX_P2 2 THR A 24 B TYR A 32 J THR A 14 TYR A 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA B 55 CYS B 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO B 60 ASP B 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR B 60 ASN B 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP B 125 LEU B 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU B 164 SER B 171 1 ? 8 HELX_P HELX_P8 8 LYS B 191 ? GLY B 195 C LYS B 185 GLY B 186 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? PHE B 257 ? LEU B 234 PHE B 245 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? A CYS 1 B CYS 122 1_555 ? ? ? ? ? ? ? 2.335 ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? B CYS 42 B CYS 58 1_555 ? ? ? ? ? ? ? 2.344 ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? B CYS 168 B CYS 182 1_555 ? ? ? ? ? ? ? 2.369 ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? B CYS 191 B CYS 220 1_555 ? ? ? ? ? ? ? 2.439 ? covale1 covale ? ? B SER 205 OG ? ? ? 1_555 D GR1 . C15 ? ? B SER 195 B GR1 1248 1_555 ? ? ? ? ? ? ? 1.264 ? covale2 covale ? ? C GLU 8 C ? ? ? 1_555 C TYS 9 N ? ? I GLU 62 I TYS 63 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale ? ? C TYS 9 C ? ? ? 1_555 C LEU 10 N ? ? I TYS 63 I LEU 64 1_555 ? ? ? ? ? ? ? 1.322 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 1 A . H THR 1 A PHE 2 A G PHE 1 A 1 -9.37 2 GLU 6 A . C GLU 1 A ALA 7 A B ALA 1 A 1 -9.00 3 SER 22 B . ? SER 37 B PRO 23 B A PRO 37 B 1 -0.44 4 PHE 257 B . ? PHE 245 B GLY 258 B ? GLY 246 B 1 6.68 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 2 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS B 77 ? MET B 80 ? LYS B 81 MET B 84 A 2 LEU B 59 ? ILE B 63 ? LEU B 64 ILE B 68 A 3 GLN B 15 ? ARG B 20 ? GLN B 30 ARG B 35 A 4 GLU B 25 ? SER B 31 ? GLU B 39 SER B 45 B 1 TRP B 37 ? THR B 40 ? TRP B 51 THR B 54 B 2 ALA B 101 ? LEU B 105 ? ALA B 104 LEU B 108 B 3 LEU B 81 ? ILE B 86 ? LEU B 85 ILE B 90 C 1 LYS B 135 ? GLY B 140 ? LYS B 135 GLY B 140 C 2 GLN B 161 ? PRO B 166 ? GLN B 156 PRO B 161 D 1 MET B 185 ? ALA B 188 ? MET B 180 ALA B 183 D 2 GLY B 238 ? HIS B 242 ? GLY B 226 HIS B 230 D 3 TRP B 219 ? GLY B 228 ? TRP B 207 GLY B 216 D 4 PRO B 208 ? LYS B 212 ? PRO B 198 LYS B 202 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS B 77 ? O LYS B 81 N ILE B 63 ? N ILE B 68 A 2 3 O LEU B 60 ? O LEU B 65 N PHE B 19 ? N PHE B 34 A 3 4 O VAL B 16 ? O VAL B 31 N ALA B 30 ? N ALA B 44 B 1 2 O VAL B 38 ? O VAL B 52 N MET B 103 ? N MET B 106 B 2 3 O LEU B 102 ? O LEU B 105 N TYR B 85 ? N TYR B 89 C 1 2 O GLY B 136 ? O GLY B 136 N LEU B 165 ? N LEU B 160 D 1 2 O PHE B 186 ? O PHE B 181 N TYR B 240 ? N TYR B 228 D 2 3 O PHE B 239 ? O PHE B 227 N TRP B 227 ? N TRP B 215 D 3 4 O TYR B 220 ? O TYR B 208 N MET B 211 ? N MET B 201 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 21 'BINDING SITE FOR RESIDUE GR1 B 1248' AC2 Software ? ? ? ? 15 'BINDING SITE FOR CHAIN I OF HIRUGEN' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 HIS B 43 ? HIS B 57 . ? 1_555 ? 2 AC1 21 TYR B 47 A TYR B 60 . ? 1_555 ? 3 AC1 21 TRP B 92 ? TRP B 96 . ? 1_555 ? 4 AC1 21 GLU B 94 A GLU B 97 . ? 1_555 ? 5 AC1 21 ASN B 95 ? ASN B 98 . ? 1_555 ? 6 AC1 21 TRP B 148 ? TRP B 148 . ? 1_555 ? 7 AC1 21 ASP B 199 ? ASP B 189 . ? 1_555 ? 8 AC1 21 ALA B 200 ? ALA B 190 . ? 1_555 ? 9 AC1 21 CYS B 201 ? CYS B 191 . ? 1_555 ? 10 AC1 21 GLU B 202 ? GLU B 192 . ? 1_555 ? 11 AC1 21 GLY B 203 ? GLY B 193 . ? 1_555 ? 12 AC1 21 ASP B 204 ? ASP B 194 . ? 1_555 ? 13 AC1 21 SER B 205 ? SER B 195 . ? 1_555 ? 14 AC1 21 VAL B 225 ? VAL B 213 . ? 1_555 ? 15 AC1 21 TRP B 227 ? TRP B 215 . ? 1_555 ? 16 AC1 21 GLY B 228 ? GLY B 216 . ? 1_555 ? 17 AC1 21 GLY B 230 ? GLY B 219 . ? 1_555 ? 18 AC1 21 HOH F . ? HOH B 2144 . ? 1_555 ? 19 AC1 21 HOH F . ? HOH B 2176 . ? 1_555 ? 20 AC1 21 HOH F . ? HOH B 2177 . ? 1_555 ? 21 AC1 21 HOH F . ? HOH B 2178 . ? 1_555 ? 22 AC2 15 PHE B 19 ? PHE B 34 . ? 1_555 ? 23 AC2 15 LEU B 60 ? LEU B 65 . ? 1_555 ? 24 AC2 15 ARG B 68 ? ARG B 73 . ? 1_555 ? 25 AC2 15 THR B 69 ? THR B 74 . ? 1_555 ? 26 AC2 15 ARG B 70 ? ARG B 75 . ? 1_555 ? 27 AC2 15 ARG B 70 ? ARG B 75 . ? 2_657 ? 28 AC2 15 TYR B 71 ? TYR B 76 . ? 1_555 ? 29 AC2 15 ILE B 78 ? ILE B 82 . ? 1_555 ? 30 AC2 15 MET B 80 ? MET B 84 . ? 1_555 ? 31 AC2 15 SER B 158 ? SER B 153 . ? 2_657 ? 32 AC2 15 HOH F . ? HOH B 2050 . ? 1_555 ? 33 AC2 15 HOH F . ? HOH B 2059 . ? 1_555 ? 34 AC2 15 HOH G . ? HOH I 2001 . ? 1_555 ? 35 AC2 15 HOH G . ? HOH I 2003 . ? 1_555 ? 36 AC2 15 HOH G . ? HOH I 2004 . ? 1_555 ? # _database_PDB_matrix.entry_id 1QJ7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1QJ7 _atom_sites.fract_transf_matrix[1][1] 0.014006 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002646 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013870 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013979 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A H n A 1 2 PHE 2 1 1 PHE PHE A G n A 1 3 GLY 3 1 1 GLY GLY A F n A 1 4 SER 4 1 1 SER SER A E n A 1 5 GLY 5 1 1 GLY GLY A D n A 1 6 GLU 6 1 1 GLU GLU A C n A 1 7 ALA 7 1 1 ALA ALA A B n A 1 8 ASP 8 1 1 ASP ASP A A n A 1 9 CYS 9 1 1 CYS CYS A . n A 1 10 GLY 10 2 2 GLY GLY A . n A 1 11 LEU 11 3 3 LEU LEU A . n A 1 12 ARG 12 4 4 ARG ARG A . n A 1 13 PRO 13 5 5 PRO PRO A . n A 1 14 LEU 14 6 6 LEU LEU A . n A 1 15 PHE 15 7 7 PHE PHE A . n A 1 16 GLU 16 8 8 GLU GLU A . n A 1 17 LYS 17 9 9 LYS LYS A . n A 1 18 LYS 18 10 10 LYS LYS A . n A 1 19 SER 19 11 11 SER SER A . n A 1 20 LEU 20 12 12 LEU LEU A . n A 1 21 GLU 21 13 13 GLU GLU A . n A 1 22 ASP 22 14 14 ASP ASP A . n A 1 23 LYS 23 14 14 LYS LYS A A n A 1 24 THR 24 14 14 THR THR A B n A 1 25 GLU 25 14 14 GLU GLU A C n A 1 26 ARG 26 14 14 ARG ARG A D n A 1 27 GLU 27 14 14 GLU GLU A E n A 1 28 LEU 28 14 14 LEU LEU A F n A 1 29 LEU 29 14 14 LEU LEU A G n A 1 30 GLU 30 14 14 GLU GLU A H n A 1 31 SER 31 14 14 SER SER A I n A 1 32 TYR 32 14 14 TYR TYR A J n A 1 33 ILE 33 14 14 ILE ILE A K n A 1 34 ASP 34 14 14 ASP ASP A L n A 1 35 GLY 35 14 14 GLY GLY A M n A 1 36 ARG 36 15 15 ARG ARG A . n B 2 1 ILE 1 16 16 ILE ILE B . n B 2 2 VAL 2 17 17 VAL VAL B . n B 2 3 GLU 3 18 18 GLU GLU B . n B 2 4 GLY 4 19 19 GLY GLY B . n B 2 5 SER 5 20 20 SER SER B . n B 2 6 ASP 6 21 21 ASP ASP B . n B 2 7 ALA 7 22 22 ALA ALA B . n B 2 8 GLU 8 23 23 GLU GLU B . n B 2 9 ILE 9 24 24 ILE ILE B . n B 2 10 GLY 10 25 25 GLY GLY B . n B 2 11 MET 11 26 26 MET MET B . n B 2 12 SER 12 27 27 SER SER B . n B 2 13 PRO 13 28 28 PRO PRO B . n B 2 14 TRP 14 29 29 TRP TRP B . n B 2 15 GLN 15 30 30 GLN GLN B . n B 2 16 VAL 16 31 31 VAL VAL B . n B 2 17 MET 17 32 32 MET MET B . n B 2 18 LEU 18 33 33 LEU LEU B . n B 2 19 PHE 19 34 34 PHE PHE B . n B 2 20 ARG 20 35 35 ARG ARG B . n B 2 21 LYS 21 36 36 LYS LYS B . n B 2 22 SER 22 37 37 SER SER B . n B 2 23 PRO 23 37 37 PRO PRO B A n B 2 24 GLN 24 38 38 GLN GLN B . n B 2 25 GLU 25 39 39 GLU GLU B . n B 2 26 LEU 26 40 40 LEU LEU B . n B 2 27 LEU 27 41 41 LEU LEU B . n B 2 28 CYS 28 42 42 CYS CYS B . n B 2 29 GLY 29 43 43 GLY GLY B . n B 2 30 ALA 30 44 44 ALA ALA B . n B 2 31 SER 31 45 45 SER SER B . n B 2 32 LEU 32 46 46 LEU LEU B . n B 2 33 ILE 33 47 47 ILE ILE B . n B 2 34 SER 34 48 48 SER SER B . n B 2 35 ASP 35 49 49 ASP ASP B . n B 2 36 ARG 36 50 50 ARG ARG B . n B 2 37 TRP 37 51 51 TRP TRP B . n B 2 38 VAL 38 52 52 VAL VAL B . n B 2 39 LEU 39 53 53 LEU LEU B . n B 2 40 THR 40 54 54 THR THR B . n B 2 41 ALA 41 55 55 ALA ALA B . n B 2 42 ALA 42 56 56 ALA ALA B . n B 2 43 HIS 43 57 57 HIS HIS B . n B 2 44 CYS 44 58 58 CYS CYS B . n B 2 45 LEU 45 59 59 LEU LEU B . n B 2 46 LEU 46 60 60 LEU LEU B . n B 2 47 TYR 47 60 60 TYR TYR B A n B 2 48 PRO 48 60 60 PRO PRO B B n B 2 49 PRO 49 60 60 PRO PRO B C n B 2 50 TRP 50 60 60 TRP TRP B D n B 2 51 ASP 51 60 60 ASP ASP B E n B 2 52 LYS 52 60 60 LYS LYS B F n B 2 53 ASN 53 60 60 ASN ASN B G n B 2 54 PHE 54 60 60 PHE PHE B H n B 2 55 THR 55 60 60 THR THR B I n B 2 56 GLU 56 61 61 GLU GLU B . n B 2 57 ASN 57 62 62 ASN ASN B . n B 2 58 ASP 58 63 63 ASP ASP B . n B 2 59 LEU 59 64 64 LEU LEU B . n B 2 60 LEU 60 65 65 LEU LEU B . n B 2 61 VAL 61 66 66 VAL VAL B . n B 2 62 ARG 62 67 67 ARG ARG B . n B 2 63 ILE 63 68 68 ILE ILE B . n B 2 64 GLY 64 69 69 GLY GLY B . n B 2 65 LYS 65 70 70 LYS LYS B . n B 2 66 HIS 66 71 71 HIS HIS B . n B 2 67 SER 67 72 72 SER SER B . n B 2 68 ARG 68 73 73 ARG ARG B . n B 2 69 THR 69 74 74 THR THR B . n B 2 70 ARG 70 75 75 ARG ARG B . n B 2 71 TYR 71 76 76 TYR TYR B . n B 2 72 GLU 72 77 77 GLU GLU B . n B 2 73 ARG 73 77 77 ARG ARG B A n B 2 74 ASN 74 78 78 ASN ASN B . n B 2 75 ILE 75 79 79 ILE ILE B . n B 2 76 GLU 76 80 80 GLU GLU B . n B 2 77 LYS 77 81 81 LYS LYS B . n B 2 78 ILE 78 82 82 ILE ILE B . n B 2 79 SER 79 83 83 SER SER B . n B 2 80 MET 80 84 84 MET MET B . n B 2 81 LEU 81 85 85 LEU LEU B . n B 2 82 GLU 82 86 86 GLU GLU B . n B 2 83 LYS 83 87 87 LYS LYS B . n B 2 84 ILE 84 88 88 ILE ILE B . n B 2 85 TYR 85 89 89 TYR TYR B . n B 2 86 ILE 86 90 90 ILE ILE B . n B 2 87 HIS 87 91 91 HIS HIS B . n B 2 88 PRO 88 92 92 PRO PRO B . n B 2 89 ARG 89 93 93 ARG ARG B . n B 2 90 TYR 90 94 94 TYR TYR B . n B 2 91 ASN 91 95 95 ASN ASN B . n B 2 92 TRP 92 96 96 TRP TRP B . n B 2 93 ARG 93 97 97 ARG ARG B . n B 2 94 GLU 94 97 97 GLU GLU B A n B 2 95 ASN 95 98 98 ASN ASN B . n B 2 96 LEU 96 99 99 LEU LEU B . n B 2 97 ASP 97 100 100 ASP ASP B . n B 2 98 ARG 98 101 101 ARG ARG B . n B 2 99 ASP 99 102 102 ASP ASP B . n B 2 100 ILE 100 103 103 ILE ILE B . n B 2 101 ALA 101 104 104 ALA ALA B . n B 2 102 LEU 102 105 105 LEU LEU B . n B 2 103 MET 103 106 106 MET MET B . n B 2 104 LYS 104 107 107 LYS LYS B . n B 2 105 LEU 105 108 108 LEU LEU B . n B 2 106 LYS 106 109 109 LYS LYS B . n B 2 107 LYS 107 110 110 LYS LYS B . n B 2 108 PRO 108 111 111 PRO PRO B . n B 2 109 VAL 109 112 112 VAL VAL B . n B 2 110 ALA 110 113 113 ALA ALA B . n B 2 111 PHE 111 114 114 PHE PHE B . n B 2 112 SER 112 115 115 SER SER B . n B 2 113 ASP 113 116 116 ASP ASP B . n B 2 114 TYR 114 117 117 TYR TYR B . n B 2 115 ILE 115 118 118 ILE ILE B . n B 2 116 HIS 116 119 119 HIS HIS B . n B 2 117 PRO 117 120 120 PRO PRO B . n B 2 118 VAL 118 121 121 VAL VAL B . n B 2 119 CYS 119 122 122 CYS CYS B . n B 2 120 LEU 120 123 123 LEU LEU B . n B 2 121 PRO 121 124 124 PRO PRO B . n B 2 122 ASP 122 125 125 ASP ASP B . n B 2 123 ARG 123 126 126 ARG ARG B . n B 2 124 GLU 124 127 127 GLU GLU B . n B 2 125 THR 125 128 128 THR THR B . n B 2 126 ALA 126 129 129 ALA ALA B . n B 2 127 ALA 127 129 129 ALA ALA B A n B 2 128 SER 128 129 129 SER SER B B n B 2 129 LEU 129 129 129 LEU LEU B C n B 2 130 LEU 130 130 130 LEU LEU B . n B 2 131 GLN 131 131 131 GLN GLN B . n B 2 132 ALA 132 132 132 ALA ALA B . n B 2 133 GLY 133 133 133 GLY GLY B . n B 2 134 TYR 134 134 134 TYR TYR B . n B 2 135 LYS 135 135 135 LYS LYS B . n B 2 136 GLY 136 136 136 GLY GLY B . n B 2 137 ARG 137 137 137 ARG ARG B . n B 2 138 VAL 138 138 138 VAL VAL B . n B 2 139 THR 139 139 139 THR THR B . n B 2 140 GLY 140 140 140 GLY GLY B . n B 2 141 TRP 141 141 141 TRP TRP B . n B 2 142 GLY 142 142 142 GLY GLY B . n B 2 143 ASN 143 143 143 ASN ASN B . n B 2 144 LEU 144 144 144 LEU LEU B . n B 2 145 LYS 145 145 145 LYS LYS B . n B 2 146 GLU 146 146 146 GLU GLU B . n B 2 147 THR 147 147 147 THR THR B . n B 2 148 TRP 148 148 148 TRP TRP B . n B 2 149 THR 149 149 149 THR THR B . n B 2 150 ALA 150 149 149 ALA ALA B A n B 2 151 ASN 151 149 149 ASN ASN B B n B 2 152 VAL 152 149 149 VAL VAL B C n B 2 153 GLY 153 149 149 GLY GLY B D n B 2 154 LYS 154 149 149 LYS LYS B E n B 2 155 GLY 155 150 150 GLY GLY B . n B 2 156 GLN 156 151 151 GLN GLN B . n B 2 157 PRO 157 152 152 PRO PRO B . n B 2 158 SER 158 153 153 SER SER B . n B 2 159 VAL 159 154 154 VAL VAL B . n B 2 160 LEU 160 155 155 LEU LEU B . n B 2 161 GLN 161 156 156 GLN GLN B . n B 2 162 VAL 162 157 157 VAL VAL B . n B 2 163 VAL 163 158 158 VAL VAL B . n B 2 164 ASN 164 159 159 ASN ASN B . n B 2 165 LEU 165 160 160 LEU LEU B . n B 2 166 PRO 166 161 161 PRO PRO B . n B 2 167 ILE 167 162 162 ILE ILE B . n B 2 168 VAL 168 163 163 VAL VAL B . n B 2 169 GLU 169 164 164 GLU GLU B . n B 2 170 ARG 170 165 165 ARG ARG B . n B 2 171 PRO 171 166 166 PRO PRO B . n B 2 172 VAL 172 167 167 VAL VAL B . n B 2 173 CYS 173 168 168 CYS CYS B . n B 2 174 LYS 174 169 169 LYS LYS B . n B 2 175 ASP 175 170 170 ASP ASP B . n B 2 176 SER 176 171 171 SER SER B . n B 2 177 THR 177 172 172 THR THR B . n B 2 178 ARG 178 173 173 ARG ARG B . n B 2 179 ILE 179 174 174 ILE ILE B . n B 2 180 ARG 180 175 175 ARG ARG B . n B 2 181 ILE 181 176 176 ILE ILE B . n B 2 182 THR 182 177 177 THR THR B . n B 2 183 ASP 183 178 178 ASP ASP B . n B 2 184 ASN 184 179 179 ASN ASN B . n B 2 185 MET 185 180 180 MET MET B . n B 2 186 PHE 186 181 181 PHE PHE B . n B 2 187 CYS 187 182 182 CYS CYS B . n B 2 188 ALA 188 183 183 ALA ALA B . n B 2 189 GLY 189 184 184 GLY GLY B A n B 2 190 TYR 190 184 184 TYR TYR B . n B 2 191 LYS 191 185 185 LYS LYS B . n B 2 192 PRO 192 186 186 PRO PRO B . n B 2 193 ASP 193 186 186 ASP ASP B A n B 2 194 GLU 194 186 186 GLU GLU B B n B 2 195 GLY 195 186 186 GLY GLY B C n B 2 196 LYS 196 186 186 LYS LYS B D n B 2 197 ARG 197 187 187 ARG ARG B . n B 2 198 GLY 198 188 188 GLY GLY B . n B 2 199 ASP 199 189 189 ASP ASP B . n B 2 200 ALA 200 190 190 ALA ALA B . n B 2 201 CYS 201 191 191 CYS CYS B . n B 2 202 GLU 202 192 192 GLU GLU B . n B 2 203 GLY 203 193 193 GLY GLY B . n B 2 204 ASP 204 194 194 ASP ASP B . n B 2 205 SER 205 195 195 SER SER B . n B 2 206 GLY 206 196 196 GLY GLY B . n B 2 207 GLY 207 197 197 GLY GLY B . n B 2 208 PRO 208 198 198 PRO PRO B . n B 2 209 PHE 209 199 199 PHE PHE B . n B 2 210 VAL 210 200 200 VAL VAL B . n B 2 211 MET 211 201 201 MET MET B . n B 2 212 LYS 212 202 202 LYS LYS B . n B 2 213 SER 213 203 203 SER SER B . n B 2 214 PRO 214 204 204 PRO PRO B . n B 2 215 PHE 215 204 204 PHE PHE B A n B 2 216 ASN 216 204 204 ASN ASN B B n B 2 217 ASN 217 205 205 ASN ASN B . n B 2 218 ARG 218 206 206 ARG ARG B . n B 2 219 TRP 219 207 207 TRP TRP B . n B 2 220 TYR 220 208 208 TYR TYR B . n B 2 221 GLN 221 209 209 GLN GLN B . n B 2 222 MET 222 210 210 MET MET B . n B 2 223 GLY 223 211 211 GLY GLY B . n B 2 224 ILE 224 212 212 ILE ILE B . n B 2 225 VAL 225 213 213 VAL VAL B . n B 2 226 SER 226 214 214 SER SER B . n B 2 227 TRP 227 215 215 TRP TRP B . n B 2 228 GLY 228 216 216 GLY GLY B . n B 2 229 GLU 229 217 217 GLU GLU B . n B 2 230 GLY 230 219 219 GLY GLY B . n B 2 231 CYS 231 220 220 CYS CYS B . n B 2 232 ASP 232 221 221 ASP ASP B A n B 2 233 ARG 233 221 221 ARG ARG B . n B 2 234 ASP 234 222 222 ASP ASP B . n B 2 235 GLY 235 223 223 GLY GLY B . n B 2 236 LYS 236 224 224 LYS LYS B . n B 2 237 TYR 237 225 225 TYR TYR B . n B 2 238 GLY 238 226 226 GLY GLY B . n B 2 239 PHE 239 227 227 PHE PHE B . n B 2 240 TYR 240 228 228 TYR TYR B . n B 2 241 THR 241 229 229 THR THR B . n B 2 242 HIS 242 230 230 HIS HIS B . n B 2 243 VAL 243 231 231 VAL VAL B . n B 2 244 PHE 244 232 232 PHE PHE B . n B 2 245 ARG 245 233 233 ARG ARG B . n B 2 246 LEU 246 234 234 LEU LEU B . n B 2 247 LYS 247 235 235 LYS LYS B . n B 2 248 LYS 248 236 236 LYS LYS B . n B 2 249 TRP 249 237 237 TRP TRP B . n B 2 250 ILE 250 238 238 ILE ILE B . n B 2 251 GLN 251 239 239 GLN GLN B . n B 2 252 LYS 252 240 240 LYS LYS B . n B 2 253 VAL 253 241 241 VAL VAL B . n B 2 254 ILE 254 242 242 ILE ILE B . n B 2 255 ASP 255 243 243 ASP ASP B . n B 2 256 GLN 256 244 244 GLN GLN B . n B 2 257 PHE 257 245 245 PHE PHE B . n B 2 258 GLY 258 246 246 GLY GLY B . n B 2 259 GLU 259 247 247 GLU GLU B . n C 3 1 ASP 1 55 55 ASP ASP I . n C 3 2 PHE 2 56 56 PHE PHE I . n C 3 3 GLU 3 57 57 GLU GLU I . n C 3 4 GLU 4 58 58 GLU GLU I . n C 3 5 ILE 5 59 59 ILE ILE I . n C 3 6 PRO 6 60 60 PRO PRO I . n C 3 7 GLU 7 61 61 GLU GLU I . n C 3 8 GLU 8 62 62 GLU GLU I . n C 3 9 TYS 9 63 63 TYS TYS I . n C 3 10 LEU 10 64 64 LEU LEU I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GR1 1 1248 1248 GR1 GR1 B . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . F 5 HOH 1 2001 2001 HOH HOH B . F 5 HOH 2 2002 2002 HOH HOH B . F 5 HOH 3 2003 2003 HOH HOH B . F 5 HOH 4 2004 2004 HOH HOH B . F 5 HOH 5 2005 2005 HOH HOH B . F 5 HOH 6 2006 2006 HOH HOH B . F 5 HOH 7 2007 2007 HOH HOH B . F 5 HOH 8 2008 2008 HOH HOH B . F 5 HOH 9 2009 2009 HOH HOH B . F 5 HOH 10 2010 2010 HOH HOH B . F 5 HOH 11 2011 2011 HOH HOH B . F 5 HOH 12 2012 2012 HOH HOH B . F 5 HOH 13 2013 2013 HOH HOH B . F 5 HOH 14 2014 2014 HOH HOH B . F 5 HOH 15 2015 2015 HOH HOH B . F 5 HOH 16 2016 2016 HOH HOH B . F 5 HOH 17 2017 2017 HOH HOH B . F 5 HOH 18 2018 2018 HOH HOH B . F 5 HOH 19 2019 2019 HOH HOH B . F 5 HOH 20 2020 2020 HOH HOH B . F 5 HOH 21 2021 2021 HOH HOH B . F 5 HOH 22 2022 2022 HOH HOH B . F 5 HOH 23 2023 2023 HOH HOH B . F 5 HOH 24 2024 2024 HOH HOH B . F 5 HOH 25 2025 2025 HOH HOH B . F 5 HOH 26 2026 2026 HOH HOH B . F 5 HOH 27 2027 2027 HOH HOH B . F 5 HOH 28 2028 2028 HOH HOH B . F 5 HOH 29 2029 2029 HOH HOH B . F 5 HOH 30 2030 2030 HOH HOH B . F 5 HOH 31 2031 2031 HOH HOH B . F 5 HOH 32 2032 2032 HOH HOH B . F 5 HOH 33 2033 2033 HOH HOH B . F 5 HOH 34 2034 2034 HOH HOH B . F 5 HOH 35 2035 2035 HOH HOH B . F 5 HOH 36 2036 2036 HOH HOH B . F 5 HOH 37 2037 2037 HOH HOH B . F 5 HOH 38 2038 2038 HOH HOH B . F 5 HOH 39 2039 2039 HOH HOH B . F 5 HOH 40 2040 2040 HOH HOH B . F 5 HOH 41 2041 2041 HOH HOH B . F 5 HOH 42 2042 2042 HOH HOH B . F 5 HOH 43 2043 2043 HOH HOH B . F 5 HOH 44 2044 2044 HOH HOH B . F 5 HOH 45 2045 2045 HOH HOH B . F 5 HOH 46 2046 2046 HOH HOH B . F 5 HOH 47 2047 2047 HOH HOH B . F 5 HOH 48 2048 2048 HOH HOH B . F 5 HOH 49 2049 2049 HOH HOH B . F 5 HOH 50 2050 2050 HOH HOH B . F 5 HOH 51 2051 2051 HOH HOH B . F 5 HOH 52 2052 2052 HOH HOH B . F 5 HOH 53 2053 2053 HOH HOH B . F 5 HOH 54 2054 2054 HOH HOH B . F 5 HOH 55 2055 2055 HOH HOH B . F 5 HOH 56 2056 2056 HOH HOH B . F 5 HOH 57 2057 2057 HOH HOH B . F 5 HOH 58 2058 2058 HOH HOH B . F 5 HOH 59 2059 2059 HOH HOH B . F 5 HOH 60 2060 2060 HOH HOH B . F 5 HOH 61 2061 2061 HOH HOH B . F 5 HOH 62 2062 2062 HOH HOH B . F 5 HOH 63 2063 2063 HOH HOH B . F 5 HOH 64 2064 2064 HOH HOH B . F 5 HOH 65 2065 2065 HOH HOH B . F 5 HOH 66 2066 2066 HOH HOH B . F 5 HOH 67 2067 2067 HOH HOH B . F 5 HOH 68 2068 2068 HOH HOH B . F 5 HOH 69 2069 2069 HOH HOH B . F 5 HOH 70 2070 2070 HOH HOH B . F 5 HOH 71 2071 2071 HOH HOH B . F 5 HOH 72 2072 2072 HOH HOH B . F 5 HOH 73 2073 2073 HOH HOH B . F 5 HOH 74 2074 2074 HOH HOH B . F 5 HOH 75 2075 2075 HOH HOH B . F 5 HOH 76 2076 2076 HOH HOH B . F 5 HOH 77 2077 2077 HOH HOH B . F 5 HOH 78 2078 2078 HOH HOH B . F 5 HOH 79 2079 2079 HOH HOH B . F 5 HOH 80 2080 2080 HOH HOH B . F 5 HOH 81 2081 2081 HOH HOH B . F 5 HOH 82 2082 2082 HOH HOH B . F 5 HOH 83 2083 2083 HOH HOH B . F 5 HOH 84 2084 2084 HOH HOH B . F 5 HOH 85 2085 2085 HOH HOH B . F 5 HOH 86 2086 2086 HOH HOH B . F 5 HOH 87 2087 2087 HOH HOH B . F 5 HOH 88 2088 2088 HOH HOH B . F 5 HOH 89 2089 2089 HOH HOH B . F 5 HOH 90 2090 2090 HOH HOH B . F 5 HOH 91 2091 2091 HOH HOH B . F 5 HOH 92 2092 2092 HOH HOH B . F 5 HOH 93 2093 2093 HOH HOH B . F 5 HOH 94 2094 2094 HOH HOH B . F 5 HOH 95 2095 2095 HOH HOH B . F 5 HOH 96 2096 2096 HOH HOH B . F 5 HOH 97 2097 2097 HOH HOH B . F 5 HOH 98 2098 2098 HOH HOH B . F 5 HOH 99 2099 2099 HOH HOH B . F 5 HOH 100 2100 2100 HOH HOH B . F 5 HOH 101 2101 2101 HOH HOH B . F 5 HOH 102 2102 2102 HOH HOH B . F 5 HOH 103 2103 2103 HOH HOH B . F 5 HOH 104 2104 2104 HOH HOH B . F 5 HOH 105 2105 2105 HOH HOH B . F 5 HOH 106 2106 2106 HOH HOH B . F 5 HOH 107 2107 2107 HOH HOH B . F 5 HOH 108 2108 2108 HOH HOH B . F 5 HOH 109 2109 2109 HOH HOH B . F 5 HOH 110 2110 2110 HOH HOH B . F 5 HOH 111 2111 2111 HOH HOH B . F 5 HOH 112 2112 2112 HOH HOH B . F 5 HOH 113 2113 2113 HOH HOH B . F 5 HOH 114 2114 2114 HOH HOH B . F 5 HOH 115 2115 2115 HOH HOH B . F 5 HOH 116 2116 2116 HOH HOH B . F 5 HOH 117 2117 2117 HOH HOH B . F 5 HOH 118 2118 2118 HOH HOH B . F 5 HOH 119 2119 2119 HOH HOH B . F 5 HOH 120 2120 2120 HOH HOH B . F 5 HOH 121 2121 2121 HOH HOH B . F 5 HOH 122 2122 2122 HOH HOH B . F 5 HOH 123 2123 2123 HOH HOH B . F 5 HOH 124 2124 2124 HOH HOH B . F 5 HOH 125 2125 2125 HOH HOH B . F 5 HOH 126 2126 2126 HOH HOH B . F 5 HOH 127 2127 2127 HOH HOH B . F 5 HOH 128 2128 2128 HOH HOH B . F 5 HOH 129 2129 2129 HOH HOH B . F 5 HOH 130 2130 2130 HOH HOH B . F 5 HOH 131 2131 2131 HOH HOH B . F 5 HOH 132 2132 2132 HOH HOH B . F 5 HOH 133 2133 2133 HOH HOH B . F 5 HOH 134 2134 2134 HOH HOH B . F 5 HOH 135 2135 2135 HOH HOH B . F 5 HOH 136 2136 2136 HOH HOH B . F 5 HOH 137 2137 2137 HOH HOH B . F 5 HOH 138 2138 2138 HOH HOH B . F 5 HOH 139 2139 2139 HOH HOH B . F 5 HOH 140 2140 2140 HOH HOH B . F 5 HOH 141 2141 2141 HOH HOH B . F 5 HOH 142 2142 2142 HOH HOH B . F 5 HOH 143 2143 2143 HOH HOH B . F 5 HOH 144 2144 2144 HOH HOH B . F 5 HOH 145 2145 2145 HOH HOH B . F 5 HOH 146 2146 2146 HOH HOH B . F 5 HOH 147 2147 2147 HOH HOH B . F 5 HOH 148 2148 2148 HOH HOH B . F 5 HOH 149 2149 2149 HOH HOH B . F 5 HOH 150 2150 2150 HOH HOH B . F 5 HOH 151 2151 2151 HOH HOH B . F 5 HOH 152 2152 2152 HOH HOH B . F 5 HOH 153 2153 2153 HOH HOH B . F 5 HOH 154 2154 2154 HOH HOH B . F 5 HOH 155 2155 2155 HOH HOH B . F 5 HOH 156 2156 2156 HOH HOH B . F 5 HOH 157 2157 2157 HOH HOH B . F 5 HOH 158 2158 2158 HOH HOH B . F 5 HOH 159 2159 2159 HOH HOH B . F 5 HOH 160 2160 2160 HOH HOH B . F 5 HOH 161 2161 2161 HOH HOH B . F 5 HOH 162 2162 2162 HOH HOH B . F 5 HOH 163 2163 2163 HOH HOH B . F 5 HOH 164 2164 2164 HOH HOH B . F 5 HOH 165 2165 2165 HOH HOH B . F 5 HOH 166 2166 2166 HOH HOH B . F 5 HOH 167 2167 2167 HOH HOH B . F 5 HOH 168 2168 2168 HOH HOH B . F 5 HOH 169 2169 2169 HOH HOH B . F 5 HOH 170 2170 2170 HOH HOH B . F 5 HOH 171 2171 2171 HOH HOH B . F 5 HOH 172 2172 2172 HOH HOH B . F 5 HOH 173 2173 2173 HOH HOH B . F 5 HOH 174 2174 2174 HOH HOH B . F 5 HOH 175 2175 2175 HOH HOH B . F 5 HOH 176 2176 2176 HOH HOH B . F 5 HOH 177 2177 2177 HOH HOH B . F 5 HOH 178 2178 2178 HOH HOH B . G 5 HOH 1 2001 2001 HOH HOH I . G 5 HOH 2 2002 2002 HOH HOH I . G 5 HOH 3 2003 2003 HOH HOH I . G 5 HOH 4 2004 2004 HOH HOH I . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 9 _pdbx_struct_mod_residue.auth_asym_id I _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 63 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4450 ? 1 MORE -26.0 ? 1 'SSA (A^2)' 16410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-06-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-11-30 4 'Structure model' 1 3 2013-03-13 5 'Structure model' 1 4 2017-07-12 6 'Structure model' 1 5 2018-05-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' Other 8 4 'Structure model' Other 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' struct # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.name' 2 6 'Structure model' '_struct.title' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language X-PLOR refinement 3.1 ? 1 ? ? ? ? MADNESS 'data reduction' . ? 2 ? ? ? ? CCP4 'data scaling' . ? 3 ? ? ? ? X-PLOR phasing 3.1 ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 1QJ7 _pdbx_entry_details.compound_details ;THE THROMBIN NUMBERING SYSTEM USED IN THE X-RAY STRUCTURE IS THE CONVENTION FOR CHYMOTRYPSIN. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 195 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 GR1 _pdbx_validate_close_contact.auth_seq_id_2 1248 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE2 B TRP 60 D ? CD2 B TRP 60 D ? 1.489 1.409 0.080 0.012 N 2 1 CE2 B TRP 96 ? ? CD2 B TRP 96 ? ? 1.489 1.409 0.080 0.012 N 3 1 CG B HIS 119 ? ? CD2 B HIS 119 ? ? 1.416 1.354 0.062 0.009 N 4 1 CE2 B TRP 141 ? ? CD2 B TRP 141 ? ? 1.484 1.409 0.075 0.012 N 5 1 CE2 B TRP 148 ? ? CD2 B TRP 148 ? ? 1.484 1.409 0.075 0.012 N 6 1 CB B SER 195 ? ? OG B SER 195 ? ? 1.238 1.418 -0.180 0.013 N 7 1 CE2 B TRP 215 ? ? CD2 B TRP 215 ? ? 1.481 1.409 0.072 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 73 ? ? CZ B ARG 73 ? ? NH1 B ARG 73 ? ? 124.01 120.30 3.71 0.50 N 2 1 NE B ARG 73 ? ? CZ B ARG 73 ? ? NH2 B ARG 73 ? ? 115.40 120.30 -4.90 0.50 N 3 1 NE B ARG 75 ? ? CZ B ARG 75 ? ? NH1 B ARG 75 ? ? 124.72 120.30 4.42 0.50 N 4 1 NE B ARG 77 A ? CZ B ARG 77 A ? NH2 B ARG 77 A ? 117.20 120.30 -3.10 0.50 N 5 1 CB B TYR 94 ? ? CG B TYR 94 ? ? CD2 B TYR 94 ? ? 117.01 121.00 -3.99 0.60 N 6 1 NE B ARG 97 ? ? CZ B ARG 97 ? ? NH1 B ARG 97 ? ? 123.40 120.30 3.10 0.50 N 7 1 NE B ARG 97 ? ? CZ B ARG 97 ? ? NH2 B ARG 97 ? ? 116.05 120.30 -4.25 0.50 N 8 1 CB B TYR 117 ? ? CG B TYR 117 ? ? CD2 B TYR 117 ? ? 117.20 121.00 -3.80 0.60 N 9 1 N B VAL 154 ? ? CA B VAL 154 ? ? CB B VAL 154 ? ? 97.47 111.50 -14.03 2.20 N 10 1 CA B VAL 154 ? ? CB B VAL 154 ? ? CG1 B VAL 154 ? ? 120.22 110.90 9.32 1.50 N 11 1 NE B ARG 165 ? ? CZ B ARG 165 ? ? NH2 B ARG 165 ? ? 115.52 120.30 -4.78 0.50 N 12 1 CB B LYS 169 ? ? CA B LYS 169 ? ? C B LYS 169 ? ? 122.43 110.40 12.03 2.00 N 13 1 NE B ARG 187 ? ? CZ B ARG 187 ? ? NH2 B ARG 187 ? ? 117.13 120.30 -3.17 0.50 N 14 1 CG B MET 201 ? ? SD B MET 201 ? ? CE B MET 201 ? ? 89.46 100.20 -10.74 1.60 N 15 1 CB B TYR 225 ? ? CG B TYR 225 ? ? CD1 B TYR 225 ? ? 117.23 121.00 -3.77 0.60 N 16 1 NE B ARG 233 ? ? CZ B ARG 233 ? ? NH1 B ARG 233 ? ? 126.42 120.30 6.12 0.50 N 17 1 NE B ARG 233 ? ? CZ B ARG 233 ? ? NH2 B ARG 233 ? ? 114.50 120.30 -5.80 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 1 B ? 91.62 -48.22 2 1 PHE A 7 ? ? -128.12 -87.73 3 1 ASP A 14 L ? 51.82 -53.50 4 1 GLN B 38 ? ? -57.11 109.11 5 1 ASN B 60 G ? -151.16 79.77 6 1 HIS B 71 ? ? -132.20 -58.06 7 1 THR B 149 ? ? 105.85 88.93 8 1 VAL B 149 C ? -81.14 -129.93 9 1 ASN B 205 ? ? 54.49 18.90 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PHE A 1 G ? GLY A 1 F ? 148.37 2 1 ILE A 14 K ? ASP A 14 L ? -148.96 3 1 TRP B 148 ? ? THR B 149 ? ? -134.88 4 1 GLN B 244 ? ? PHE B 245 ? ? 140.41 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG B 73 ? ? 0.095 'SIDE CHAIN' 2 1 ARG B 233 ? ? 0.076 'SIDE CHAIN' # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? B HOH 2002 ? 6.92 . 2 1 O ? B HOH 2003 ? 6.79 . 3 1 O ? B HOH 2004 ? 5.96 . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id I _pdbx_unobs_or_zero_occ_atoms.auth_comp_id TYS _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 63 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O3 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id C _pdbx_unobs_or_zero_occ_atoms.label_comp_id TYS _pdbx_unobs_or_zero_occ_atoms.label_seq_id 9 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '6-CARBAMIMIDOYL-2-[5-(3-DIETHYLCARBAMOYL-PHENYL)-2-HYDROXY-INDAN-1-YL]-HEXANOIC ACID' GR1 5 water HOH #