HEADER TYROSINE-PROTEIN KINASE 20-SEP-99 1QLY TITLE NMR STUDY OF THE SH3 DOMAIN FROM BRUTON'S TYROSINE KINASE, 20 TITLE 2 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE BTK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN RESIDUES 216 - 273; COMPND 5 SYNONYM: BRUTONS TYROSINE KINASE, B CELL PROGENITOR KINASE, BPK, COMPND 6 AGAMMAGLOBULINAEMIA TYROSINE KINASE, ATK; COMPND 7 EC: 2.7.1.112; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: BLOOD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS TRANSFERASE, TYROSINE-PROTEIN KINASE, PHOSPHORYLATION, SH3 DOMAIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.R.TZENG,Y.C.LOU,M.T.PAI,C.CHEN,S.H.CHEN,J.Y.CHENG REVDAT 5 15-MAY-24 1QLY 1 REMARK REVDAT 4 24-FEB-09 1QLY 1 VERSN REVDAT 3 03-JUN-00 1QLY 1 JRNL REVDAT 2 11-JAN-00 1QLY 1 SHEET REVDAT 1 14-DEC-99 1QLY 0 JRNL AUTH S.R.TZENG,Y.C.LOU,M.T.PAI,C.P.CHEN,S.H.CHEN,J.W.CHENG JRNL TITL SOLUTION STRUCTURE OF THE HUMAN BTK SH3 DOMAIN COMPLEXED JRNL TITL 2 WITH A PROLINE-RICH PEPTIDE FROM P120CBL JRNL REF J.BIOMOL.NMR V. 16 303 2000 JRNL REFN ISSN 0925-2738 JRNL PMID 10826882 JRNL DOI 10.1023/A:1008376624863 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.HANSSON,P.T.MATTSSON,P.ALLARD,P.HAAPANIEMI,M.VIHINEN, REMARK 1 AUTH 2 C.I.E.SMITH,T.HARD REMARK 1 TITL SOLUTION STRUCTURE OF THE SH3 DOMAIN FROM BRUTON'S TYROSINE REMARK 1 TITL 2 KINASE REMARK 1 REF BIOCHEMISTRY V. 37 2912 1998 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 9485443 REMARK 1 DOI 10.1021/BI972409F REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : A. T. BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QLY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-99. REMARK 100 THE DEPOSITION ID IS D_1290004024. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 MM K2HPO4, 100 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 90% WATER / 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; TOCSY; DQF-COSY; 15N REMARK 210 -NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 6 176.78 -50.51 REMARK 500 1 LEU A 7 -59.74 -146.25 REMARK 500 1 ASN A 14 -59.83 -128.87 REMARK 500 1 ALA A 15 -59.68 -163.55 REMARK 500 1 LYS A 22 96.13 34.37 REMARK 500 1 SER A 32 -169.03 -174.91 REMARK 500 1 TRP A 37 -159.91 -118.66 REMARK 500 1 ASP A 41 179.08 -54.21 REMARK 500 1 TYR A 53 -115.20 -114.56 REMARK 500 1 VAL A 54 -147.28 31.95 REMARK 500 1 GLU A 56 -136.16 60.87 REMARK 500 2 LYS A 2 -174.69 -59.13 REMARK 500 2 ALA A 6 175.43 -48.62 REMARK 500 2 LEU A 7 -44.41 -160.06 REMARK 500 2 ASP A 9 148.87 62.25 REMARK 500 2 TYR A 10 109.92 -160.04 REMARK 500 2 PRO A 12 -78.40 -77.08 REMARK 500 2 ASN A 14 -33.54 -178.06 REMARK 500 2 LEU A 20 163.53 -49.13 REMARK 500 2 ARG A 21 27.93 -142.82 REMARK 500 2 LYS A 22 91.85 35.94 REMARK 500 2 GLU A 30 160.08 179.99 REMARK 500 2 SER A 32 -171.33 -179.97 REMARK 500 2 LEU A 34 163.56 -42.81 REMARK 500 2 TRP A 37 -158.77 -114.16 REMARK 500 2 ARG A 38 79.59 -119.28 REMARK 500 2 TYR A 53 -114.40 -130.35 REMARK 500 2 VAL A 54 -148.09 31.46 REMARK 500 2 GLU A 56 -135.36 58.96 REMARK 500 3 LYS A 2 -162.38 -124.24 REMARK 500 3 ALA A 6 -179.84 -50.64 REMARK 500 3 LEU A 7 -69.45 -146.55 REMARK 500 3 ASP A 9 154.75 77.46 REMARK 500 3 ASN A 14 -73.45 -116.43 REMARK 500 3 ALA A 15 -60.30 -179.92 REMARK 500 3 ASP A 17 126.18 -39.11 REMARK 500 3 GLN A 19 95.86 -61.00 REMARK 500 3 LEU A 20 162.75 -43.98 REMARK 500 3 LYS A 22 96.19 33.67 REMARK 500 3 GLU A 30 -116.82 -158.12 REMARK 500 3 GLU A 31 -165.76 162.38 REMARK 500 3 SER A 32 140.83 164.25 REMARK 500 3 LEU A 34 165.99 -42.94 REMARK 500 3 TRP A 37 -159.82 -141.99 REMARK 500 3 ASP A 41 177.29 -47.89 REMARK 500 3 VAL A 54 -146.02 -150.26 REMARK 500 3 GLU A 56 -123.41 60.11 REMARK 500 3 ALA A 57 58.85 -65.14 REMARK 500 4 LYS A 3 60.01 -156.36 REMARK 500 4 ALA A 6 -179.68 -49.58 REMARK 500 REMARK 500 THIS ENTRY HAS 313 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 21 0.13 SIDE CHAIN REMARK 500 1 ARG A 38 0.21 SIDE CHAIN REMARK 500 1 ARG A 40 0.24 SIDE CHAIN REMARK 500 2 ARG A 21 0.24 SIDE CHAIN REMARK 500 2 ARG A 38 0.14 SIDE CHAIN REMARK 500 2 ARG A 40 0.19 SIDE CHAIN REMARK 500 3 ARG A 21 0.29 SIDE CHAIN REMARK 500 3 ARG A 38 0.31 SIDE CHAIN REMARK 500 4 ARG A 21 0.29 SIDE CHAIN REMARK 500 4 ARG A 38 0.31 SIDE CHAIN REMARK 500 4 ARG A 40 0.21 SIDE CHAIN REMARK 500 5 ARG A 21 0.27 SIDE CHAIN REMARK 500 5 ARG A 38 0.15 SIDE CHAIN REMARK 500 5 ARG A 40 0.29 SIDE CHAIN REMARK 500 6 ARG A 21 0.31 SIDE CHAIN REMARK 500 6 ARG A 38 0.25 SIDE CHAIN REMARK 500 6 ARG A 40 0.17 SIDE CHAIN REMARK 500 7 ARG A 21 0.32 SIDE CHAIN REMARK 500 7 ARG A 38 0.30 SIDE CHAIN REMARK 500 8 ARG A 21 0.20 SIDE CHAIN REMARK 500 8 ARG A 38 0.12 SIDE CHAIN REMARK 500 8 ARG A 40 0.17 SIDE CHAIN REMARK 500 9 ARG A 21 0.28 SIDE CHAIN REMARK 500 9 ARG A 38 0.13 SIDE CHAIN REMARK 500 9 ARG A 40 0.30 SIDE CHAIN REMARK 500 10 ARG A 21 0.16 SIDE CHAIN REMARK 500 10 ARG A 38 0.27 SIDE CHAIN REMARK 500 10 ARG A 40 0.31 SIDE CHAIN REMARK 500 11 ARG A 21 0.28 SIDE CHAIN REMARK 500 11 ARG A 38 0.25 SIDE CHAIN REMARK 500 11 ARG A 40 0.20 SIDE CHAIN REMARK 500 12 ARG A 21 0.18 SIDE CHAIN REMARK 500 12 ARG A 38 0.13 SIDE CHAIN REMARK 500 12 ARG A 40 0.28 SIDE CHAIN REMARK 500 13 ARG A 21 0.24 SIDE CHAIN REMARK 500 13 ARG A 38 0.23 SIDE CHAIN REMARK 500 13 ARG A 40 0.25 SIDE CHAIN REMARK 500 14 ARG A 21 0.32 SIDE CHAIN REMARK 500 14 ARG A 38 0.29 SIDE CHAIN REMARK 500 14 ARG A 40 0.30 SIDE CHAIN REMARK 500 15 ARG A 21 0.12 SIDE CHAIN REMARK 500 15 ARG A 38 0.31 SIDE CHAIN REMARK 500 15 ARG A 40 0.10 SIDE CHAIN REMARK 500 16 ARG A 21 0.32 SIDE CHAIN REMARK 500 16 ARG A 38 0.32 SIDE CHAIN REMARK 500 16 ARG A 40 0.32 SIDE CHAIN REMARK 500 17 ARG A 21 0.28 SIDE CHAIN REMARK 500 17 ARG A 38 0.27 SIDE CHAIN REMARK 500 17 ARG A 40 0.19 SIDE CHAIN REMARK 500 18 ARG A 21 0.14 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 58 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AWX RELATED DB: PDB REMARK 900 SH3 DOMAIN FROM BRUTON'S TYROSINE KINASE, NMR, MINIMIZED AVERAGE REMARK 900 STRUCTURE REMARK 900 RELATED ID: 1AWW RELATED DB: PDB REMARK 900 SH3 DOMAIN FROM BRUTON'S TYROSINE KINASE, NMR, 42 STRUCTURES REMARK 900 RELATED ID: 1BTK RELATED DB: PDB REMARK 900 PH DOMAIN AND BTK MOTIF FROM BRUTON'S TYROSINE KINASE MUTANT R28C DBREF 1QLY A 1 58 UNP Q06187 BTK_HUMAN 216 273 SEQRES 1 A 58 LEU LYS LYS VAL VAL ALA LEU TYR ASP TYR MET PRO MET SEQRES 2 A 58 ASN ALA ASN ASP LEU GLN LEU ARG LYS GLY ASP GLU TYR SEQRES 3 A 58 PHE ILE LEU GLU GLU SER ASN LEU PRO TRP TRP ARG ALA SEQRES 4 A 58 ARG ASP LYS ASN GLY GLN GLU GLY TYR ILE PRO SER ASN SEQRES 5 A 58 TYR VAL THR GLU ALA GLU SHEET 1 B1 5 VAL A 54 THR A 55 0 SHEET 2 B1 5 LYS A 3 ALA A 6 -1 N VAL A 4 O THR A 55 SHEET 3 B1 5 GLU A 25 LEU A 29 -1 N TYR A 26 O VAL A 4 SHEET 4 B1 5 TRP A 37 ASP A 41 -1 N ARG A 40 O PHE A 27 SHEET 5 B1 5 GLN A 45 ILE A 49 -1 N GLY A 47 O ALA A 39 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1