data_1QP4 # _entry.id 1QP4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1QP4 NDB PD0058 RCSB RCSB009133 WWPDB D_1000009133 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BDH . unspecified PDB 1QPZ . unspecified PDB 1QP0 . unspecified PDB 1QP7 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QP4 _pdbx_database_status.recvd_initial_deposition_date 1999-06-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Glasfeld, A.' 1 'Koehler, A.N.' 2 'Schumacher, M.A.' 3 'Brennan, R.G.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The role of lysine 55 in determining the specificity of the purine repressor for its operators through minor groove interactions.' J.Mol.Biol. 291 347 361 1999 JMOBAK UK 0022-2836 0070 ? 10438625 10.1006/jmbi.1999.2946 1 'Crystal Structure of LacI Member, PurR, Bound to DNA: Minor Groove Binding by Alpha Helices' Science 266 763 ? 1994 SCIEAS US 0036-8075 0038 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Glasfeld, A.' 1 primary 'Koehler, A.N.' 2 primary 'Schumacher, M.A.' 3 primary 'Brennan, R.G.' 4 1 'Schumacher, M.A.' 5 1 'Choi, K.Y.' 6 1 'Zalkin, H.' 7 1 'Brennan, R.G.' 8 # _cell.entry_id 1QP4 _cell.length_a 176.480 _cell.length_b 95.260 _cell.length_c 81.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QP4 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*TP*CP*GP*AP*TP*TP*GP*CP*GP*T)-3') ; 5202.384 1 ? ? ? ? 2 polymer man 'PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)' 38091.594 1 ? ? ? ? 3 non-polymer syn HYPOXANTHINE 136.111 1 ? ? ? ? 4 water nat water 18.015 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name PURA # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DG)(DC)(DA)(DA)(DT)(DC)(DG)(DA)(DT)(DT)(DG)(DC)(DG)(DT)' TACGCAATCGATTGCGT M ? 2 'polypeptide(L)' no no ;ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR ; ;ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DA n 1 7 DA n 1 8 DT n 1 9 DC n 1 10 DG n 1 11 DA n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DC n 1 16 DG n 1 17 DT n 2 1 ALA n 2 2 THR n 2 3 ILE n 2 4 LYS n 2 5 ASP n 2 6 VAL n 2 7 ALA n 2 8 LYS n 2 9 ARG n 2 10 ALA n 2 11 ASN n 2 12 VAL n 2 13 SER n 2 14 THR n 2 15 THR n 2 16 THR n 2 17 VAL n 2 18 SER n 2 19 HIS n 2 20 VAL n 2 21 ILE n 2 22 ASN n 2 23 LYS n 2 24 THR n 2 25 ARG n 2 26 PHE n 2 27 VAL n 2 28 ALA n 2 29 GLU n 2 30 GLU n 2 31 THR n 2 32 ARG n 2 33 ASN n 2 34 ALA n 2 35 VAL n 2 36 TRP n 2 37 ALA n 2 38 ALA n 2 39 ILE n 2 40 LYS n 2 41 GLU n 2 42 LEU n 2 43 HIS n 2 44 TYR n 2 45 SER n 2 46 PRO n 2 47 SER n 2 48 ALA n 2 49 VAL n 2 50 ALA n 2 51 ARG n 2 52 SER n 2 53 LEU n 2 54 LYS n 2 55 VAL n 2 56 ASN n 2 57 HIS n 2 58 THR n 2 59 LYS n 2 60 SER n 2 61 ILE n 2 62 GLY n 2 63 LEU n 2 64 LEU n 2 65 ALA n 2 66 THR n 2 67 SER n 2 68 SER n 2 69 GLU n 2 70 ALA n 2 71 ALA n 2 72 TYR n 2 73 PHE n 2 74 ALA n 2 75 GLU n 2 76 ILE n 2 77 ILE n 2 78 GLU n 2 79 ALA n 2 80 VAL n 2 81 GLU n 2 82 LYS n 2 83 ASN n 2 84 CYS n 2 85 PHE n 2 86 GLN n 2 87 LYS n 2 88 GLY n 2 89 TYR n 2 90 THR n 2 91 LEU n 2 92 ILE n 2 93 LEU n 2 94 GLY n 2 95 ASN n 2 96 ALA n 2 97 TRP n 2 98 ASN n 2 99 ASN n 2 100 LEU n 2 101 GLU n 2 102 LYS n 2 103 GLN n 2 104 ARG n 2 105 ALA n 2 106 TYR n 2 107 LEU n 2 108 SER n 2 109 MET n 2 110 MET n 2 111 ALA n 2 112 GLN n 2 113 LYS n 2 114 ARG n 2 115 VAL n 2 116 ASP n 2 117 GLY n 2 118 LEU n 2 119 LEU n 2 120 VAL n 2 121 MET n 2 122 CYS n 2 123 SER n 2 124 GLU n 2 125 TYR n 2 126 PRO n 2 127 GLU n 2 128 PRO n 2 129 LEU n 2 130 LEU n 2 131 ALA n 2 132 MET n 2 133 LEU n 2 134 GLU n 2 135 GLU n 2 136 TYR n 2 137 ARG n 2 138 HIS n 2 139 ILE n 2 140 PRO n 2 141 MET n 2 142 VAL n 2 143 VAL n 2 144 MET n 2 145 ASP n 2 146 TRP n 2 147 GLY n 2 148 GLU n 2 149 ALA n 2 150 LYS n 2 151 ALA n 2 152 ASP n 2 153 PHE n 2 154 THR n 2 155 ASP n 2 156 ALA n 2 157 VAL n 2 158 ILE n 2 159 ASP n 2 160 ASN n 2 161 ALA n 2 162 PHE n 2 163 GLU n 2 164 GLY n 2 165 GLY n 2 166 TYR n 2 167 MET n 2 168 ALA n 2 169 GLY n 2 170 ARG n 2 171 TYR n 2 172 LEU n 2 173 ILE n 2 174 GLU n 2 175 ARG n 2 176 GLY n 2 177 HIS n 2 178 ARG n 2 179 GLU n 2 180 ILE n 2 181 GLY n 2 182 VAL n 2 183 ILE n 2 184 PRO n 2 185 GLY n 2 186 PRO n 2 187 LEU n 2 188 GLU n 2 189 ARG n 2 190 ASN n 2 191 THR n 2 192 GLY n 2 193 ALA n 2 194 GLY n 2 195 ARG n 2 196 LEU n 2 197 ALA n 2 198 GLY n 2 199 PHE n 2 200 MET n 2 201 LYS n 2 202 ALA n 2 203 MET n 2 204 GLU n 2 205 GLU n 2 206 ALA n 2 207 MET n 2 208 ILE n 2 209 LYS n 2 210 VAL n 2 211 PRO n 2 212 GLU n 2 213 SER n 2 214 TRP n 2 215 ILE n 2 216 VAL n 2 217 GLN n 2 218 GLY n 2 219 ASP n 2 220 PHE n 2 221 GLU n 2 222 PRO n 2 223 GLU n 2 224 SER n 2 225 GLY n 2 226 TYR n 2 227 ARG n 2 228 ALA n 2 229 MET n 2 230 GLN n 2 231 GLN n 2 232 ILE n 2 233 LEU n 2 234 SER n 2 235 GLN n 2 236 PRO n 2 237 HIS n 2 238 ARG n 2 239 PRO n 2 240 THR n 2 241 ALA n 2 242 VAL n 2 243 PHE n 2 244 CYS n 2 245 GLY n 2 246 GLY n 2 247 ASP n 2 248 ILE n 2 249 MET n 2 250 ALA n 2 251 MET n 2 252 GLY n 2 253 ALA n 2 254 LEU n 2 255 CYS n 2 256 ALA n 2 257 ALA n 2 258 ASP n 2 259 GLU n 2 260 MET n 2 261 GLY n 2 262 LEU n 2 263 ARG n 2 264 VAL n 2 265 PRO n 2 266 GLN n 2 267 ASP n 2 268 VAL n 2 269 SER n 2 270 LEU n 2 271 ILE n 2 272 GLY n 2 273 TYR n 2 274 ASP n 2 275 ASN n 2 276 VAL n 2 277 ARG n 2 278 ASN n 2 279 ALA n 2 280 ARG n 2 281 TYR n 2 282 PHE n 2 283 THR n 2 284 PRO n 2 285 ALA n 2 286 LEU n 2 287 THR n 2 288 THR n 2 289 ILE n 2 290 HIS n 2 291 GLN n 2 292 PRO n 2 293 LYS n 2 294 ASP n 2 295 SER n 2 296 LEU n 2 297 GLY n 2 298 GLU n 2 299 THR n 2 300 ALA n 2 301 PHE n 2 302 ASN n 2 303 MET n 2 304 LEU n 2 305 LEU n 2 306 ASP n 2 307 ARG n 2 308 ILE n 2 309 VAL n 2 310 ASN n 2 311 LYS n 2 312 ARG n 2 313 GLU n 2 314 GLU n 2 315 PRO n 2 316 GLN n 2 317 SER n 2 318 ILE n 2 319 GLU n 2 320 VAL n 2 321 HIS n 2 322 PRO n 2 323 ARG n 2 324 LEU n 2 325 ILE n 2 326 GLU n 2 327 ARG n 2 328 ARG n 2 329 SER n 2 330 VAL n 2 331 ALA n 2 332 ASP n 2 333 GLY n 2 334 PRO n 2 335 PHE n 2 336 ARG n 2 337 ASP n 2 338 TYR n 2 339 ARG n 2 340 ARG n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene PURR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene PURR _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 LAMBDA DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET24A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PDNA100\:K55A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PURR_ECOLI 2 P0ACP7 ? ? ? 2 PDB 1QP4 1 1QP4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1QP4 A 1 ? 340 ? P0ACP7 1 ? 340 ? 2 341 2 2 1QP4 M 1 ? 17 ? 1QP4 699 ? 715 ? 699 715 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HPA non-polymer . HYPOXANTHINE ? 'C5 H4 N4 O' 136.111 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1QP4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.92 _exptl_crystal.density_percent_sol 68.63 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 4000, (NH4)2SO4, [CO(NH3)6]CL3, NA2SO4, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 '[CO(NH3)6]CL3' ? ? ? 1 2 1 '(NH4)2SO4' ? ? ? 1 3 1 NA2SO4 ? ? ? 1 4 1 'PEG 4000' ? ? ? 1 5 2 '(NH4)2SO4' ? ? ? 1 6 2 NA2SO4 ? ? ? 1 7 2 'PEG 4000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'UCSD MARK III' _diffrn_detector.pdbx_collection_date 1996-02-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1QP4 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10.0 _reflns.d_resolution_high 3.0 _reflns.number_obs 13547 _reflns.number_all ? _reflns.percent_possible_obs 99. _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 7.9700000 _reflns.pdbx_netI_over_sigmaI 9.32 _reflns.B_iso_Wilson_estimate 41.0 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_k_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.23 _reflns_shell.percent_possible_all 89.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1QP4 _refine.ls_number_reflns_obs 13547 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 3.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.1570000 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ;DNA BASE GEOMETRIES TAKEN FROM CLOWNEY ET AL. (1996) J. AM. CHEM. SOC., VOL. 118, PP. 509-518. SUGAR PHOSPHATE GEOMETRIES TAKEN FROM GELBIN ET AL. (1996) J. AM. CHEM. SOC., VOL. 118, PP. 519-529. ; _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2652 _refine_hist.pdbx_number_atoms_nucleic_acid 345 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 3009 _refine_hist.d_res_high 3.0 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.015 ? 2.1 ? 'X-RAY DIFFRACTION' ? t_angle_deg 1.8 ? 1.8 ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_it ? ? ? ? 'X-RAY DIFFRACTION' ? t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1QP4 _struct.title 'PURINE REPRESSOR-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX' _struct.pdbx_descriptor 'PURINE NUCLEOTIDE SYNTHESIS REPRESSOR/DNA COMPLEX, HYPOXANTHINE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QP4 _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'TRANSCRIPTION REGULATION, DNA-BINDING, REPRESSOR, PURINE BIOSYNTHESIS, COMPLEX (DNA-BINDING PROTEIN-DNA), TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE B 3 ? ALA B 10 ? ILE A 4 ALA A 11 1 ? 8 HELX_P HELX_P2 2 THR B 14 ? ASN B 22 ? THR A 15 ASN A 23 1 ? 9 HELX_P HELX_P3 3 GLU B 29 ? LEU B 42 ? GLU A 30 LEU A 43 1 ? 14 HELX_P HELX_P4 4 ALA B 48 ? VAL B 55 ? ALA A 49 VAL A 56 1 ? 8 HELX_P HELX_P5 5 ALA B 71 ? LYS B 87 ? ALA A 72 LYS A 88 1 ? 17 HELX_P HELX_P6 6 LEU B 100 ? GLN B 112 ? LEU A 101 GLN A 113 1 ? 13 HELX_P HELX_P7 7 GLU B 127 ? TYR B 136 ? GLU A 128 TYR A 137 1 ? 10 HELX_P HELX_P8 8 ALA B 161 ? ARG B 175 ? ALA A 162 ARG A 176 1 ? 15 HELX_P HELX_P9 9 ASN B 190 ? ALA B 206 ? ASN A 191 ALA A 207 1 ? 17 HELX_P HELX_P10 10 GLU B 212 ? TRP B 214 ? GLU A 213 TRP A 215 5 ? 3 HELX_P HELX_P11 11 PRO B 222 ? LEU B 233 ? PRO A 223 LEU A 234 1 ? 12 HELX_P HELX_P12 12 ASP B 247 ? GLU B 259 ? ASP A 248 GLU A 260 1 ? 13 HELX_P HELX_P13 13 ALA B 279 ? TYR B 281 ? ALA A 280 TYR A 282 5 ? 3 HELX_P HELX_P14 14 LYS B 293 ? VAL B 309 ? LYS A 294 VAL A 310 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 A DT 17 N3 ? ? M DA 700 M DT 715 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 A DT 17 O4 ? ? M DA 700 M DT 715 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 16 N1 ? ? M DC 701 M DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 16 O6 ? ? M DC 701 M DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 16 N2 ? ? M DC 701 M DG 714 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 15 N3 ? ? M DG 702 M DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 15 O2 ? ? M DG 702 M DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 15 N4 ? ? M DG 702 M DC 713 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 14 N1 ? ? M DC 703 M DG 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 14 O6 ? ? M DC 703 M DG 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 14 N2 ? ? M DC 703 M DG 712 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 13 N3 ? ? M DA 704 M DT 711 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 13 O4 ? ? M DA 704 M DT 711 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 12 N3 ? ? M DA 705 M DT 710 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 12 O4 ? ? M DA 705 M DT 710 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 11 N1 ? ? M DT 706 M DA 709 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 11 N6 ? ? M DT 706 M DA 709 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 A DG 10 N1 ? ? M DC 707 M DG 708 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 A DG 10 O6 ? ? M DC 707 M DG 708 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 A DG 10 N2 ? ? M DC 707 M DG 708 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 9 N3 ? ? M DG 708 M DC 707 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 9 O2 ? ? M DG 708 M DC 707 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 9 N4 ? ? M DG 708 M DC 707 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A DA 11 N1 ? ? ? 1_555 A DT 8 N3 ? ? M DA 709 M DT 706 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A DA 11 N6 ? ? ? 1_555 A DT 8 O4 ? ? M DA 709 M DT 706 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A DT 12 N3 ? ? ? 1_555 A DA 7 N1 ? ? M DT 710 M DA 705 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DA 7 N6 ? ? M DT 710 M DA 705 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? A DT 13 N3 ? ? ? 1_555 A DA 6 N1 ? ? M DT 711 M DA 704 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? A DT 13 O4 ? ? ? 1_555 A DA 6 N6 ? ? M DT 711 M DA 704 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DC 5 N3 ? ? M DG 712 M DC 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DC 5 O2 ? ? M DG 712 M DC 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DC 5 N4 ? ? M DG 712 M DC 703 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? A DC 15 N3 ? ? ? 1_555 A DG 4 N1 ? ? M DC 713 M DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? A DC 15 N4 ? ? ? 1_555 A DG 4 O6 ? ? M DC 713 M DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? A DC 15 O2 ? ? ? 1_555 A DG 4 N2 ? ? M DC 713 M DG 702 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 3 N3 ? ? M DG 714 M DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 3 O2 ? ? M DG 714 M DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 3 N4 ? ? M DG 714 M DC 701 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? A DT 17 N3 ? ? ? 1_555 A DA 2 N1 ? ? M DT 715 M DA 700 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? A DT 17 O4 ? ? ? 1_555 A DA 2 N6 ? ? M DT 715 M DA 700 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 264 B . ? VAL 265 A PRO 265 B ? PRO 266 A 1 4.64 2 THR 283 B . ? THR 284 A PRO 284 B ? PRO 285 A 1 1.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 90 ? ASN B 95 ? THR A 91 ASN A 96 A 2 SER B 60 ? ALA B 65 ? SER A 61 ALA A 66 A 3 GLY B 117 ? VAL B 120 ? GLY A 118 VAL A 121 A 4 MET B 141 ? TRP B 146 ? MET A 142 TRP A 147 A 5 ASP B 155 ? ILE B 158 ? ASP A 156 ILE A 159 A 6 SER B 317 ? GLU B 319 ? SER A 318 GLU A 320 B 1 ILE B 180 ? ILE B 183 ? ILE A 181 ILE A 184 B 2 ALA B 241 ? CYS B 244 ? ALA A 242 CYS A 245 B 3 SER B 269 ? ASP B 274 ? SER A 270 ASP A 275 B 4 THR B 288 ? HIS B 290 ? THR A 289 HIS A 291 B 5 ARG B 323 ? ILE B 325 ? ARG A 324 ILE A 326 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY B 94 ? O GLY A 95 N LEU B 63 ? N LEU A 64 A 2 3 N GLY B 62 ? N GLY A 63 O LEU B 119 ? O LEU A 120 A 3 4 N VAL B 120 ? N VAL A 121 O MET B 144 ? O MET A 145 A 4 5 N MET B 141 ? N MET A 142 O ASP B 155 ? O ASP A 156 A 5 6 N ILE B 158 ? N ILE A 159 O ILE B 318 ? O ILE A 319 B 1 2 N GLY B 181 ? N GLY A 182 O PHE B 243 ? O PHE A 244 B 2 3 N CYS B 244 ? N CYS A 245 O ILE B 271 ? O ILE A 272 B 3 4 N ASP B 274 ? N ASP A 275 O ILE B 289 ? O ILE A 290 B 4 5 N HIS B 290 ? N HIS A 291 O ARG B 323 ? O ARG A 324 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE HPA A 599' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TYR B 72 ? TYR A 73 . ? 1_555 ? 2 AC1 7 PHE B 73 ? PHE A 74 . ? 1_555 ? 3 AC1 7 ARG B 189 ? ARG A 190 . ? 1_555 ? 4 AC1 7 THR B 191 ? THR A 192 . ? 1_555 ? 5 AC1 7 ARG B 195 ? ARG A 196 . ? 1_555 ? 6 AC1 7 PHE B 220 ? PHE A 221 . ? 1_555 ? 7 AC1 7 ASP B 274 ? ASP A 275 . ? 1_555 ? # _database_PDB_matrix.entry_id 1QP4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1QP4 _atom_sites.fract_transf_matrix[1][1] 0.005666 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010498 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012318 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 699 699 DT DT M . n A 1 2 DA 2 700 700 DA DA M . n A 1 3 DC 3 701 701 DC DC M . n A 1 4 DG 4 702 702 DG DG M . n A 1 5 DC 5 703 703 DC DC M . n A 1 6 DA 6 704 704 DA DA M . n A 1 7 DA 7 705 705 DA DA M . n A 1 8 DT 8 706 706 DT DT M . n A 1 9 DC 9 707 707 DC DC M . n A 1 10 DG 10 708 708 DG DG M . n A 1 11 DA 11 709 709 DA DA M . n A 1 12 DT 12 710 710 DT DT M . n A 1 13 DT 13 711 711 DT DT M . n A 1 14 DG 14 712 712 DG DG M . n A 1 15 DC 15 713 713 DC DC M . n A 1 16 DG 16 714 714 DG DG M . n A 1 17 DT 17 715 715 DT DT M . n B 2 1 ALA 1 2 ? ? ? A . n B 2 2 THR 2 3 3 THR THR A . n B 2 3 ILE 3 4 4 ILE ILE A . n B 2 4 LYS 4 5 5 LYS LYS A . n B 2 5 ASP 5 6 6 ASP ASP A . n B 2 6 VAL 6 7 7 VAL VAL A . n B 2 7 ALA 7 8 8 ALA ALA A . n B 2 8 LYS 8 9 9 LYS LYS A . n B 2 9 ARG 9 10 10 ARG ARG A . n B 2 10 ALA 10 11 11 ALA ALA A . n B 2 11 ASN 11 12 12 ASN ASN A . n B 2 12 VAL 12 13 13 VAL VAL A . n B 2 13 SER 13 14 14 SER SER A . n B 2 14 THR 14 15 15 THR THR A . n B 2 15 THR 15 16 16 THR THR A . n B 2 16 THR 16 17 17 THR THR A . n B 2 17 VAL 17 18 18 VAL VAL A . n B 2 18 SER 18 19 19 SER SER A . n B 2 19 HIS 19 20 20 HIS HIS A . n B 2 20 VAL 20 21 21 VAL VAL A . n B 2 21 ILE 21 22 22 ILE ILE A . n B 2 22 ASN 22 23 23 ASN ASN A . n B 2 23 LYS 23 24 24 LYS LYS A . n B 2 24 THR 24 25 25 THR THR A . n B 2 25 ARG 25 26 26 ARG ARG A . n B 2 26 PHE 26 27 27 PHE PHE A . n B 2 27 VAL 27 28 28 VAL VAL A . n B 2 28 ALA 28 29 29 ALA ALA A . n B 2 29 GLU 29 30 30 GLU GLU A . n B 2 30 GLU 30 31 31 GLU GLU A . n B 2 31 THR 31 32 32 THR THR A . n B 2 32 ARG 32 33 33 ARG ARG A . n B 2 33 ASN 33 34 34 ASN ASN A . n B 2 34 ALA 34 35 35 ALA ALA A . n B 2 35 VAL 35 36 36 VAL VAL A . n B 2 36 TRP 36 37 37 TRP TRP A . n B 2 37 ALA 37 38 38 ALA ALA A . n B 2 38 ALA 38 39 39 ALA ALA A . n B 2 39 ILE 39 40 40 ILE ILE A . n B 2 40 LYS 40 41 41 LYS LYS A . n B 2 41 GLU 41 42 42 GLU GLU A . n B 2 42 LEU 42 43 43 LEU LEU A . n B 2 43 HIS 43 44 44 HIS HIS A . n B 2 44 TYR 44 45 45 TYR TYR A . n B 2 45 SER 45 46 46 SER SER A . n B 2 46 PRO 46 47 47 PRO PRO A . n B 2 47 SER 47 48 48 SER SER A . n B 2 48 ALA 48 49 49 ALA ALA A . n B 2 49 VAL 49 50 50 VAL VAL A . n B 2 50 ALA 50 51 51 ALA ALA A . n B 2 51 ARG 51 52 52 ARG ARG A . n B 2 52 SER 52 53 53 SER SER A . n B 2 53 LEU 53 54 54 LEU LEU A . n B 2 54 LYS 54 55 55 LYS LYS A . n B 2 55 VAL 55 56 56 VAL VAL A . n B 2 56 ASN 56 57 57 ASN ASN A . n B 2 57 HIS 57 58 58 HIS HIS A . n B 2 58 THR 58 59 59 THR THR A . n B 2 59 LYS 59 60 60 LYS LYS A . n B 2 60 SER 60 61 61 SER SER A . n B 2 61 ILE 61 62 62 ILE ILE A . n B 2 62 GLY 62 63 63 GLY GLY A . n B 2 63 LEU 63 64 64 LEU LEU A . n B 2 64 LEU 64 65 65 LEU LEU A . n B 2 65 ALA 65 66 66 ALA ALA A . n B 2 66 THR 66 67 67 THR THR A . n B 2 67 SER 67 68 68 SER SER A . n B 2 68 SER 68 69 69 SER SER A . n B 2 69 GLU 69 70 70 GLU GLU A . n B 2 70 ALA 70 71 71 ALA ALA A . n B 2 71 ALA 71 72 72 ALA ALA A . n B 2 72 TYR 72 73 73 TYR TYR A . n B 2 73 PHE 73 74 74 PHE PHE A . n B 2 74 ALA 74 75 75 ALA ALA A . n B 2 75 GLU 75 76 76 GLU GLU A . n B 2 76 ILE 76 77 77 ILE ILE A . n B 2 77 ILE 77 78 78 ILE ILE A . n B 2 78 GLU 78 79 79 GLU GLU A . n B 2 79 ALA 79 80 80 ALA ALA A . n B 2 80 VAL 80 81 81 VAL VAL A . n B 2 81 GLU 81 82 82 GLU GLU A . n B 2 82 LYS 82 83 83 LYS LYS A . n B 2 83 ASN 83 84 84 ASN ASN A . n B 2 84 CYS 84 85 85 CYS CYS A . n B 2 85 PHE 85 86 86 PHE PHE A . n B 2 86 GLN 86 87 87 GLN GLN A . n B 2 87 LYS 87 88 88 LYS LYS A . n B 2 88 GLY 88 89 89 GLY GLY A . n B 2 89 TYR 89 90 90 TYR TYR A . n B 2 90 THR 90 91 91 THR THR A . n B 2 91 LEU 91 92 92 LEU LEU A . n B 2 92 ILE 92 93 93 ILE ILE A . n B 2 93 LEU 93 94 94 LEU LEU A . n B 2 94 GLY 94 95 95 GLY GLY A . n B 2 95 ASN 95 96 96 ASN ASN A . n B 2 96 ALA 96 97 97 ALA ALA A . n B 2 97 TRP 97 98 98 TRP TRP A . n B 2 98 ASN 98 99 99 ASN ASN A . n B 2 99 ASN 99 100 100 ASN ASN A . n B 2 100 LEU 100 101 101 LEU LEU A . n B 2 101 GLU 101 102 102 GLU GLU A . n B 2 102 LYS 102 103 103 LYS LYS A . n B 2 103 GLN 103 104 104 GLN GLN A . n B 2 104 ARG 104 105 105 ARG ARG A . n B 2 105 ALA 105 106 106 ALA ALA A . n B 2 106 TYR 106 107 107 TYR TYR A . n B 2 107 LEU 107 108 108 LEU LEU A . n B 2 108 SER 108 109 109 SER SER A . n B 2 109 MET 109 110 110 MET MET A . n B 2 110 MET 110 111 111 MET MET A . n B 2 111 ALA 111 112 112 ALA ALA A . n B 2 112 GLN 112 113 113 GLN GLN A . n B 2 113 LYS 113 114 114 LYS LYS A . n B 2 114 ARG 114 115 115 ARG ARG A . n B 2 115 VAL 115 116 116 VAL VAL A . n B 2 116 ASP 116 117 117 ASP ASP A . n B 2 117 GLY 117 118 118 GLY GLY A . n B 2 118 LEU 118 119 119 LEU LEU A . n B 2 119 LEU 119 120 120 LEU LEU A . n B 2 120 VAL 120 121 121 VAL VAL A . n B 2 121 MET 121 122 122 MET MET A . n B 2 122 CYS 122 123 123 CYS CYS A . n B 2 123 SER 123 124 124 SER SER A . n B 2 124 GLU 124 125 125 GLU GLU A . n B 2 125 TYR 125 126 126 TYR TYR A . n B 2 126 PRO 126 127 127 PRO PRO A . n B 2 127 GLU 127 128 128 GLU GLU A . n B 2 128 PRO 128 129 129 PRO PRO A . n B 2 129 LEU 129 130 130 LEU LEU A . n B 2 130 LEU 130 131 131 LEU LEU A . n B 2 131 ALA 131 132 132 ALA ALA A . n B 2 132 MET 132 133 133 MET MET A . n B 2 133 LEU 133 134 134 LEU LEU A . n B 2 134 GLU 134 135 135 GLU GLU A . n B 2 135 GLU 135 136 136 GLU GLU A . n B 2 136 TYR 136 137 137 TYR TYR A . n B 2 137 ARG 137 138 138 ARG ARG A . n B 2 138 HIS 138 139 139 HIS HIS A . n B 2 139 ILE 139 140 140 ILE ILE A . n B 2 140 PRO 140 141 141 PRO PRO A . n B 2 141 MET 141 142 142 MET MET A . n B 2 142 VAL 142 143 143 VAL VAL A . n B 2 143 VAL 143 144 144 VAL VAL A . n B 2 144 MET 144 145 145 MET MET A . n B 2 145 ASP 145 146 146 ASP ASP A . n B 2 146 TRP 146 147 147 TRP TRP A . n B 2 147 GLY 147 148 148 GLY GLY A . n B 2 148 GLU 148 149 149 GLU GLU A . n B 2 149 ALA 149 150 150 ALA ALA A . n B 2 150 LYS 150 151 151 LYS LYS A . n B 2 151 ALA 151 152 152 ALA ALA A . n B 2 152 ASP 152 153 153 ASP ASP A . n B 2 153 PHE 153 154 154 PHE PHE A . n B 2 154 THR 154 155 155 THR THR A . n B 2 155 ASP 155 156 156 ASP ASP A . n B 2 156 ALA 156 157 157 ALA ALA A . n B 2 157 VAL 157 158 158 VAL VAL A . n B 2 158 ILE 158 159 159 ILE ILE A . n B 2 159 ASP 159 160 160 ASP ASP A . n B 2 160 ASN 160 161 161 ASN ASN A . n B 2 161 ALA 161 162 162 ALA ALA A . n B 2 162 PHE 162 163 163 PHE PHE A . n B 2 163 GLU 163 164 164 GLU GLU A . n B 2 164 GLY 164 165 165 GLY GLY A . n B 2 165 GLY 165 166 166 GLY GLY A . n B 2 166 TYR 166 167 167 TYR TYR A . n B 2 167 MET 167 168 168 MET MET A . n B 2 168 ALA 168 169 169 ALA ALA A . n B 2 169 GLY 169 170 170 GLY GLY A . n B 2 170 ARG 170 171 171 ARG ARG A . n B 2 171 TYR 171 172 172 TYR TYR A . n B 2 172 LEU 172 173 173 LEU LEU A . n B 2 173 ILE 173 174 174 ILE ILE A . n B 2 174 GLU 174 175 175 GLU GLU A . n B 2 175 ARG 175 176 176 ARG ARG A . n B 2 176 GLY 176 177 177 GLY GLY A . n B 2 177 HIS 177 178 178 HIS HIS A . n B 2 178 ARG 178 179 179 ARG ARG A . n B 2 179 GLU 179 180 180 GLU GLU A . n B 2 180 ILE 180 181 181 ILE ILE A . n B 2 181 GLY 181 182 182 GLY GLY A . n B 2 182 VAL 182 183 183 VAL VAL A . n B 2 183 ILE 183 184 184 ILE ILE A . n B 2 184 PRO 184 185 185 PRO PRO A . n B 2 185 GLY 185 186 186 GLY GLY A . n B 2 186 PRO 186 187 187 PRO PRO A . n B 2 187 LEU 187 188 188 LEU LEU A . n B 2 188 GLU 188 189 189 GLU GLU A . n B 2 189 ARG 189 190 190 ARG ARG A . n B 2 190 ASN 190 191 191 ASN ASN A . n B 2 191 THR 191 192 192 THR THR A . n B 2 192 GLY 192 193 193 GLY GLY A . n B 2 193 ALA 193 194 194 ALA ALA A . n B 2 194 GLY 194 195 195 GLY GLY A . n B 2 195 ARG 195 196 196 ARG ARG A . n B 2 196 LEU 196 197 197 LEU LEU A . n B 2 197 ALA 197 198 198 ALA ALA A . n B 2 198 GLY 198 199 199 GLY GLY A . n B 2 199 PHE 199 200 200 PHE PHE A . n B 2 200 MET 200 201 201 MET MET A . n B 2 201 LYS 201 202 202 LYS LYS A . n B 2 202 ALA 202 203 203 ALA ALA A . n B 2 203 MET 203 204 204 MET MET A . n B 2 204 GLU 204 205 205 GLU GLU A . n B 2 205 GLU 205 206 206 GLU GLU A . n B 2 206 ALA 206 207 207 ALA ALA A . n B 2 207 MET 207 208 208 MET MET A . n B 2 208 ILE 208 209 209 ILE ILE A . n B 2 209 LYS 209 210 210 LYS LYS A . n B 2 210 VAL 210 211 211 VAL VAL A . n B 2 211 PRO 211 212 212 PRO PRO A . n B 2 212 GLU 212 213 213 GLU GLU A . n B 2 213 SER 213 214 214 SER SER A . n B 2 214 TRP 214 215 215 TRP TRP A . n B 2 215 ILE 215 216 216 ILE ILE A . n B 2 216 VAL 216 217 217 VAL VAL A . n B 2 217 GLN 217 218 218 GLN GLN A . n B 2 218 GLY 218 219 219 GLY GLY A . n B 2 219 ASP 219 220 220 ASP ASP A . n B 2 220 PHE 220 221 221 PHE PHE A . n B 2 221 GLU 221 222 222 GLU GLU A . n B 2 222 PRO 222 223 223 PRO PRO A . n B 2 223 GLU 223 224 224 GLU GLU A . n B 2 224 SER 224 225 225 SER SER A . n B 2 225 GLY 225 226 226 GLY GLY A . n B 2 226 TYR 226 227 227 TYR TYR A . n B 2 227 ARG 227 228 228 ARG ARG A . n B 2 228 ALA 228 229 229 ALA ALA A . n B 2 229 MET 229 230 230 MET MET A . n B 2 230 GLN 230 231 231 GLN GLN A . n B 2 231 GLN 231 232 232 GLN GLN A . n B 2 232 ILE 232 233 233 ILE ILE A . n B 2 233 LEU 233 234 234 LEU LEU A . n B 2 234 SER 234 235 235 SER SER A . n B 2 235 GLN 235 236 236 GLN GLN A . n B 2 236 PRO 236 237 237 PRO PRO A . n B 2 237 HIS 237 238 238 HIS HIS A . n B 2 238 ARG 238 239 239 ARG ARG A . n B 2 239 PRO 239 240 240 PRO PRO A . n B 2 240 THR 240 241 241 THR THR A . n B 2 241 ALA 241 242 242 ALA ALA A . n B 2 242 VAL 242 243 243 VAL VAL A . n B 2 243 PHE 243 244 244 PHE PHE A . n B 2 244 CYS 244 245 245 CYS CYS A . n B 2 245 GLY 245 246 246 GLY GLY A . n B 2 246 GLY 246 247 247 GLY GLY A . n B 2 247 ASP 247 248 248 ASP ASP A . n B 2 248 ILE 248 249 249 ILE ILE A . n B 2 249 MET 249 250 250 MET MET A . n B 2 250 ALA 250 251 251 ALA ALA A . n B 2 251 MET 251 252 252 MET MET A . n B 2 252 GLY 252 253 253 GLY GLY A . n B 2 253 ALA 253 254 254 ALA ALA A . n B 2 254 LEU 254 255 255 LEU LEU A . n B 2 255 CYS 255 256 256 CYS CYS A . n B 2 256 ALA 256 257 257 ALA ALA A . n B 2 257 ALA 257 258 258 ALA ALA A . n B 2 258 ASP 258 259 259 ASP ASP A . n B 2 259 GLU 259 260 260 GLU GLU A . n B 2 260 MET 260 261 261 MET MET A . n B 2 261 GLY 261 262 262 GLY GLY A . n B 2 262 LEU 262 263 263 LEU LEU A . n B 2 263 ARG 263 264 264 ARG ARG A . n B 2 264 VAL 264 265 265 VAL VAL A . n B 2 265 PRO 265 266 266 PRO PRO A . n B 2 266 GLN 266 267 267 GLN GLN A . n B 2 267 ASP 267 268 268 ASP ASP A . n B 2 268 VAL 268 269 269 VAL VAL A . n B 2 269 SER 269 270 270 SER SER A . n B 2 270 LEU 270 271 271 LEU LEU A . n B 2 271 ILE 271 272 272 ILE ILE A . n B 2 272 GLY 272 273 273 GLY GLY A . n B 2 273 TYR 273 274 274 TYR TYR A . n B 2 274 ASP 274 275 275 ASP ASP A . n B 2 275 ASN 275 276 276 ASN ASN A . n B 2 276 VAL 276 277 277 VAL VAL A . n B 2 277 ARG 277 278 278 ARG ARG A . n B 2 278 ASN 278 279 279 ASN ASN A . n B 2 279 ALA 279 280 280 ALA ALA A . n B 2 280 ARG 280 281 281 ARG ARG A . n B 2 281 TYR 281 282 282 TYR TYR A . n B 2 282 PHE 282 283 283 PHE PHE A . n B 2 283 THR 283 284 284 THR THR A . n B 2 284 PRO 284 285 285 PRO PRO A . n B 2 285 ALA 285 286 286 ALA ALA A . n B 2 286 LEU 286 287 287 LEU LEU A . n B 2 287 THR 287 288 288 THR THR A . n B 2 288 THR 288 289 289 THR THR A . n B 2 289 ILE 289 290 290 ILE ILE A . n B 2 290 HIS 290 291 291 HIS HIS A . n B 2 291 GLN 291 292 292 GLN GLN A . n B 2 292 PRO 292 293 293 PRO PRO A . n B 2 293 LYS 293 294 294 LYS LYS A . n B 2 294 ASP 294 295 295 ASP ASP A . n B 2 295 SER 295 296 296 SER SER A . n B 2 296 LEU 296 297 297 LEU LEU A . n B 2 297 GLY 297 298 298 GLY GLY A . n B 2 298 GLU 298 299 299 GLU GLU A . n B 2 299 THR 299 300 300 THR THR A . n B 2 300 ALA 300 301 301 ALA ALA A . n B 2 301 PHE 301 302 302 PHE PHE A . n B 2 302 ASN 302 303 303 ASN ASN A . n B 2 303 MET 303 304 304 MET MET A . n B 2 304 LEU 304 305 305 LEU LEU A . n B 2 305 LEU 305 306 306 LEU LEU A . n B 2 306 ASP 306 307 307 ASP ASP A . n B 2 307 ARG 307 308 308 ARG ARG A . n B 2 308 ILE 308 309 309 ILE ILE A . n B 2 309 VAL 309 310 310 VAL VAL A . n B 2 310 ASN 310 311 311 ASN ASN A . n B 2 311 LYS 311 312 312 LYS LYS A . n B 2 312 ARG 312 313 313 ARG ARG A . n B 2 313 GLU 313 314 314 GLU GLU A . n B 2 314 GLU 314 315 315 GLU GLU A . n B 2 315 PRO 315 316 316 PRO PRO A . n B 2 316 GLN 316 317 317 GLN GLN A . n B 2 317 SER 317 318 318 SER SER A . n B 2 318 ILE 318 319 319 ILE ILE A . n B 2 319 GLU 319 320 320 GLU GLU A . n B 2 320 VAL 320 321 321 VAL VAL A . n B 2 321 HIS 321 322 322 HIS HIS A . n B 2 322 PRO 322 323 323 PRO PRO A . n B 2 323 ARG 323 324 324 ARG ARG A . n B 2 324 LEU 324 325 325 LEU LEU A . n B 2 325 ILE 325 326 326 ILE ILE A . n B 2 326 GLU 326 327 327 GLU GLU A . n B 2 327 ARG 327 328 328 ARG ARG A . n B 2 328 ARG 328 329 329 ARG ARG A . n B 2 329 SER 329 330 330 SER SER A . n B 2 330 VAL 330 331 331 VAL VAL A . n B 2 331 ALA 331 332 332 ALA ALA A . n B 2 332 ASP 332 333 333 ASP ASP A . n B 2 333 GLY 333 334 334 GLY GLY A . n B 2 334 PRO 334 335 335 PRO PRO A . n B 2 335 PHE 335 336 336 PHE PHE A . n B 2 336 ARG 336 337 337 ARG ARG A . n B 2 337 ASP 337 338 338 ASP ASP A . n B 2 338 TYR 338 339 339 TYR TYR A . n B 2 339 ARG 339 340 340 ARG ARG A . n B 2 340 ARG 340 341 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HPA 1 599 599 HPA HPA A . D 4 HOH 1 717 717 HOH HOH A . D 4 HOH 2 718 718 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-06-07 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal TNT refinement . ? 1 UCSD-system 'data reduction' . ? 2 UCSD-system 'data scaling' . ? 3 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" M DA 709 ? ? P M DA 709 ? ? OP1 M DA 709 ? ? 100.28 105.70 -5.42 0.90 N 2 1 "O4'" M DA 709 ? ? "C1'" M DA 709 ? ? N9 M DA 709 ? ? 110.57 108.30 2.27 0.30 N 3 1 C A GLU 222 ? ? N A PRO 223 ? ? CD A PRO 223 ? ? 111.78 128.40 -16.62 2.10 Y 4 1 CB A LEU 287 ? ? CG A LEU 287 ? ? CD1 A LEU 287 ? ? 99.39 111.00 -11.61 1.70 N 5 1 C A GLU 315 ? ? N A PRO 316 ? ? CD A PRO 316 ? ? 114.07 128.40 -14.33 2.10 Y 6 1 CB A ILE 326 ? ? CA A ILE 326 ? ? C A ILE 326 ? ? 99.46 111.60 -12.14 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 19 ? ? -55.76 -75.24 2 1 LYS A 24 ? ? 35.07 53.52 3 1 HIS A 58 ? ? -170.65 140.86 4 1 SER A 124 ? ? 66.82 -75.91 5 1 ARG A 179 ? ? -145.32 -16.79 6 1 MET A 208 ? ? 71.26 30.24 7 1 TYR A 227 ? ? -52.01 -72.21 8 1 TYR A 274 ? ? -161.90 118.12 9 1 ASP A 275 ? ? 137.39 -35.01 10 1 ASN A 311 ? ? -67.66 14.18 11 1 LYS A 312 ? ? 39.44 37.17 12 1 SER A 318 ? ? -168.82 118.20 13 1 ARG A 328 ? ? -118.70 -133.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 2 ? B ALA 1 2 1 Y 1 A ARG 341 ? B ARG 340 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1QP4 'double helix' 1QP4 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 A DT 17 4_555 0.458 0.039 -0.083 -17.433 1.952 -4.969 1 M_DA700:DT715_M M 700 ? M 715 ? 20 1 1 A DC 3 1_555 A DG 16 4_555 0.212 -0.210 0.048 -4.153 6.620 -2.662 2 M_DC701:DG714_M M 701 ? M 714 ? 19 1 1 A DG 4 1_555 A DC 15 4_555 0.199 -0.276 0.292 2.622 -0.884 -4.664 3 M_DG702:DC713_M M 702 ? M 713 ? 19 1 1 A DC 5 1_555 A DG 14 4_555 -0.059 -0.225 0.158 4.275 -13.141 -1.782 4 M_DC703:DG712_M M 703 ? M 712 ? 19 1 1 A DA 6 1_555 A DT 13 4_555 0.499 -0.088 0.069 2.116 -1.752 2.720 5 M_DA704:DT711_M M 704 ? M 711 ? 20 1 1 A DA 7 1_555 A DT 12 4_555 0.182 -0.129 0.164 10.030 -7.994 0.500 6 M_DA705:DT710_M M 705 ? M 710 ? 20 1 1 A DT 8 1_555 A DA 11 4_555 -0.059 -0.189 -0.125 20.110 -14.021 -2.415 7 M_DT706:DA709_M M 706 ? M 709 ? 20 1 1 A DC 9 1_555 A DG 10 4_555 -0.200 -0.185 -0.281 11.773 -7.683 -1.842 8 M_DC707:DG708_M M 707 ? M 708 ? 19 1 1 A DG 10 1_555 A DC 9 4_555 0.200 -0.185 -0.281 -11.773 -7.683 -1.842 9 M_DG708:DC707_M M 708 ? M 707 ? 19 1 1 A DA 11 1_555 A DT 8 4_555 0.059 -0.189 -0.125 -20.110 -14.021 -2.415 10 M_DA709:DT706_M M 709 ? M 706 ? 20 1 1 A DT 12 1_555 A DA 7 4_555 -0.182 -0.129 0.164 -10.030 -7.994 0.500 11 M_DT710:DA705_M M 710 ? M 705 ? 20 1 1 A DT 13 1_555 A DA 6 4_555 -0.499 -0.088 0.069 -2.116 -1.752 2.720 12 M_DT711:DA704_M M 711 ? M 704 ? 20 1 1 A DG 14 1_555 A DC 5 4_555 0.059 -0.225 0.158 -4.275 -13.141 -1.782 13 M_DG712:DC703_M M 712 ? M 703 ? 19 1 1 A DC 15 1_555 A DG 4 4_555 -0.199 -0.276 0.292 -2.622 -0.884 -4.664 14 M_DC713:DG702_M M 713 ? M 702 ? 19 1 1 A DG 16 1_555 A DC 3 4_555 -0.212 -0.210 0.048 4.153 6.620 -2.662 15 M_DG714:DC701_M M 714 ? M 701 ? 19 1 1 A DT 17 1_555 A DA 2 4_555 -0.458 0.039 -0.083 17.433 1.952 -4.969 16 M_DT715:DA700_M M 715 ? M 700 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 A DT 17 4_555 A DC 3 1_555 A DG 16 4_555 0.421 -0.771 3.191 -3.982 1.808 25.363 -2.216 -2.015 3.029 4.079 8.983 25.731 1 MM_DA700DC701:DG714DT715_MM M 700 ? M 715 ? M 701 ? M 714 ? 1 A DC 3 1_555 A DG 16 4_555 A DG 4 1_555 A DC 15 4_555 -0.905 -0.875 3.332 -1.438 -2.997 31.819 -1.026 1.372 3.435 -5.448 2.613 31.988 2 MM_DC701DG702:DC713DG714_MM M 701 ? M 714 ? M 702 ? M 713 ? 1 A DG 4 1_555 A DC 15 4_555 A DC 5 1_555 A DG 14 4_555 -0.587 -0.064 3.395 1.349 -2.622 38.206 0.242 1.069 3.370 -3.999 -2.057 38.315 3 MM_DG702DC703:DG712DC713_MM M 702 ? M 713 ? M 703 ? M 712 ? 1 A DC 5 1_555 A DG 14 4_555 A DA 6 1_555 A DT 13 4_555 1.166 1.177 3.559 3.343 5.184 38.924 1.056 -1.284 3.763 7.720 -4.979 39.391 4 MM_DC703DA704:DT711DG712_MM M 703 ? M 712 ? M 704 ? M 711 ? 1 A DA 6 1_555 A DT 13 4_555 A DA 7 1_555 A DT 12 4_555 -0.467 0.330 3.241 -2.096 0.423 32.785 0.512 0.469 3.267 0.749 3.708 32.853 5 MM_DA704DA705:DT710DT711_MM M 704 ? M 711 ? M 705 ? M 710 ? 1 A DA 7 1_555 A DT 12 4_555 A DT 8 1_555 A DA 11 4_555 0.286 -0.952 3.183 -3.555 7.514 31.918 -2.877 -1.072 2.844 13.383 6.332 32.955 6 MM_DA705DT706:DA709DT710_MM M 705 ? M 710 ? M 706 ? M 709 ? 1 A DT 8 1_555 A DA 11 4_555 A DC 9 1_555 A DG 10 4_555 -0.703 0.233 3.729 2.815 -0.392 31.894 0.503 1.850 3.652 -0.711 -5.110 32.017 7 MM_DT706DC707:DG708DA709_MM M 706 ? M 709 ? M 707 ? M 708 ? 1 A DC 9 1_555 A DG 10 4_555 A DG 10 1_555 A DC 9 4_555 0.000 1.288 5.129 0.000 45.025 14.306 -5.593 0.000 2.821 73.277 0.000 47.130 8 MM_DC707DG708:DC707DG708_MM M 707 ? M 708 ? M 708 ? M 707 ? 1 A DG 10 1_555 A DC 9 4_555 A DA 11 1_555 A DT 8 4_555 0.703 0.233 3.729 -2.815 -0.392 31.894 0.503 -1.850 3.652 -0.711 5.110 32.017 9 MM_DG708DA709:DT706DC707_MM M 708 ? M 707 ? M 709 ? M 706 ? 1 A DA 11 1_555 A DT 8 4_555 A DT 12 1_555 A DA 7 4_555 -0.286 -0.952 3.183 3.555 7.514 31.917 -2.877 1.072 2.844 13.383 -6.332 32.955 10 MM_DA709DT710:DA705DT706_MM M 709 ? M 706 ? M 710 ? M 705 ? 1 A DT 12 1_555 A DA 7 4_555 A DT 13 1_555 A DA 6 4_555 0.467 0.330 3.241 2.096 0.423 32.785 0.512 -0.469 3.267 0.749 -3.708 32.853 11 MM_DT710DT711:DA704DA705_MM M 710 ? M 705 ? M 711 ? M 704 ? 1 A DT 13 1_555 A DA 6 4_555 A DG 14 1_555 A DC 5 4_555 -1.166 1.177 3.559 -3.343 5.184 38.924 1.056 1.284 3.763 7.720 4.979 39.391 12 MM_DT711DG712:DC703DA704_MM M 711 ? M 704 ? M 712 ? M 703 ? 1 A DG 14 1_555 A DC 5 4_555 A DC 15 1_555 A DG 4 4_555 0.587 -0.064 3.395 -1.349 -2.622 38.206 0.242 -1.069 3.370 -3.999 2.057 38.315 13 MM_DG712DC713:DG702DC703_MM M 712 ? M 703 ? M 713 ? M 702 ? 1 A DC 15 1_555 A DG 4 4_555 A DG 16 1_555 A DC 3 4_555 0.905 -0.875 3.332 1.438 -2.997 31.819 -1.026 -1.372 3.435 -5.448 -2.613 31.988 14 MM_DC713DG714:DC701DG702_MM M 713 ? M 702 ? M 714 ? M 701 ? 1 A DG 16 1_555 A DC 3 4_555 A DT 17 1_555 A DA 2 4_555 -0.421 -0.771 3.191 3.982 1.808 25.363 -2.216 2.015 3.029 4.079 -8.983 25.731 15 MM_DG714DT715:DA700DC701_MM M 714 ? M 701 ? M 715 ? M 700 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 HYPOXANTHINE HPA 4 water HOH #