HEADER TRANSFERASE 02-JUN-99 1QQC TITLE CRYSTAL STRUCTURE OF AN ARCHAEBACTERIAL DNA POLYMERASE D.TOK COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE II; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROCOCCUS SP. TOK; SOURCE 3 ORGANISM_TAXID: 108142; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET30 KEYWDS DNA POLYMERASE, THERMOSTABLE, EXONUCLEASE, RBD DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHAO,D.JERUZALMI,L.LEIGHTON,R.LASKEN,J.KURIYAN REVDAT 4 30-OCT-24 1QQC 1 REMARK LINK REVDAT 3 24-FEB-09 1QQC 1 VERSN REVDAT 2 20-APR-04 1QQC 1 COMPND SOURCE JRNL HETATM REVDAT 2 2 1 REMARK REVDAT 1 14-OCT-99 1QQC 0 JRNL AUTH Y.ZHAO,D.JERUZALMI,I.MOAREFI,L.LEIGHTON,R.LASKEN,J.KURIYAN JRNL TITL CRYSTAL STRUCTURE OF AN ARCHAEBACTERIAL DNA POLYMERASE JRNL REF STRUCTURE FOLD.DES. V. 7 1189 1999 JRNL REFN ISSN 0969-2126 JRNL PMID 10545321 JRNL DOI 10.1016/S0969-2126(00)80053-2 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.3 REMARK 3 NUMBER OF REFLECTIONS : 31591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3161 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6029 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.616 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS PACKAGE REMARK 4 REMARK 4 1QQC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUN-99. REMARK 100 THE DEPOSITION ID IS D_1000009142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-97 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.908 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OTHER REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31591 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.15600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, PEG 4000, AMMONIUM SULFATE, REMARK 280 MAGNESIUM SULFATE, TRIS, PH 8.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.95000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.95000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 386 REMARK 465 GLY A 387 REMARK 465 TYR A 388 REMARK 465 VAL A 389 REMARK 465 GLN A 665 REMARK 465 ILE A 666 REMARK 465 THR A 667 REMARK 465 ARG A 668 REMARK 465 ASP A 669 REMARK 465 LEU A 670 REMARK 465 ARG A 671 REMARK 465 SER A 672 REMARK 465 TYR A 673 REMARK 465 ARG A 674 REMARK 465 ALA A 675 REMARK 465 THR A 676 REMARK 465 TYR A 757 REMARK 465 GLN A 758 REMARK 465 LYS A 759 REMARK 465 THR A 760 REMARK 465 LYS A 761 REMARK 465 GLN A 762 REMARK 465 ALA A 763 REMARK 465 GLY A 764 REMARK 465 LEU A 765 REMARK 465 GLY A 766 REMARK 465 ALA A 767 REMARK 465 TRP A 768 REMARK 465 LEU A 769 REMARK 465 LYS A 770 REMARK 465 PRO A 771 REMARK 465 LYS A 772 REMARK 465 THR A 773 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 145 CG CD1 CD2 REMARK 470 TYR A 146 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 147 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 148 CG CD OE1 OE2 REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 294 CG CD OE1 OE2 REMARK 470 ILE A 295 CG1 CG2 CD1 REMARK 470 ARG A 297 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 299 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 299 CZ3 CH2 REMARK 470 GLU A 300 CG CD OE1 OE2 REMARK 470 LYS A 390 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 284 N - CA - C ANGL. DEV. = 15.9 DEGREES REMARK 500 PRO A 286 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 GLY A 304 N - CA - C ANGL. DEV. = -20.8 DEGREES REMARK 500 GLN A 736 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 6 -159.30 -154.24 REMARK 500 ASP A 132 27.12 -148.59 REMARK 500 LEU A 138 134.58 -171.76 REMARK 500 HIS A 147 57.84 -110.91 REMARK 500 GLU A 148 -84.97 12.75 REMARK 500 GLU A 151 43.78 -166.18 REMARK 500 PHE A 152 102.92 3.99 REMARK 500 PRO A 156 173.83 -48.83 REMARK 500 ALA A 168 109.60 -178.59 REMARK 500 SER A 185 -86.05 -43.17 REMARK 500 PHE A 214 -68.33 -139.51 REMARK 500 ARG A 222 32.29 -79.60 REMARK 500 PHE A 230 81.13 -69.33 REMARK 500 ARG A 234 -4.44 -57.22 REMARK 500 MET A 244 -93.34 -98.16 REMARK 500 ARG A 247 -160.09 -115.95 REMARK 500 ARG A 255 -165.05 -109.56 REMARK 500 ARG A 266 -29.75 -141.28 REMARK 500 THR A 277 -74.95 -63.77 REMARK 500 PHE A 283 41.95 -158.55 REMARK 500 VAL A 290 98.55 92.73 REMARK 500 GLU A 303 -152.79 -145.60 REMARK 500 SER A 312 -71.18 -57.41 REMARK 500 ARG A 380 5.47 -52.17 REMARK 500 ASN A 424 59.49 31.34 REMARK 500 PRO A 435 -105.03 -17.34 REMARK 500 TRP A 504 35.80 -90.83 REMARK 500 CYS A 506 94.49 -162.90 REMARK 500 ASN A 565 33.97 -76.79 REMARK 500 LYS A 592 33.28 -153.43 REMARK 500 ARG A 612 176.70 -56.15 REMARK 500 HIS A 653 48.80 34.91 REMARK 500 PRO A 657 -12.15 -45.49 REMARK 500 ARG A 689 10.13 -67.02 REMARK 500 ARG A 694 -159.63 -121.24 REMARK 500 PRO A 707 22.44 -62.54 REMARK 500 ARG A 709 152.13 -46.69 REMARK 500 PRO A 722 19.13 -62.36 REMARK 500 ALA A 723 -6.26 -149.69 REMARK 500 ASP A 728 88.15 -59.91 REMARK 500 GLN A 736 -61.63 -98.89 REMARK 500 PRO A 739 5.48 -61.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A3030 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD1 REMARK 620 2 GLU A 143 OE2 84.4 REMARK 620 3 ASP A 315 OD1 101.4 116.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A3031 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD2 REMARK 620 2 ASP A 141 OD1 45.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1091 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1487 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3030 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 3031 DBREF 1QQC A 1 773 UNP Q7SIG7 Q7SIG7_9CREN 1 773 SEQRES 1 A 773 MET ILE LEU ASP ALA ASP TYR ILE THR GLU ASP GLY LYS SEQRES 2 A 773 PRO VAL ILE ARG VAL PHE LYS LYS GLU LYS GLY GLU PHE SEQRES 3 A 773 LYS ILE ASP TYR ASP ARG ASP PHE GLU PRO TYR ILE TYR SEQRES 4 A 773 ALA LEU LEU LYS ASP ASP SER ALA ILE GLU ASP ILE LYS SEQRES 5 A 773 LYS ILE THR ALA GLU ARG HIS GLY THR THR VAL ARG VAL SEQRES 6 A 773 THR ARG ALA GLU ARG VAL LYS LYS LYS PHE LEU GLY ARG SEQRES 7 A 773 PRO VAL GLU VAL TRP LYS LEU TYR PHE THR HIS PRO GLN SEQRES 8 A 773 ASP VAL PRO ALA ILE ARG ASP LYS ILE ARG GLU HIS PRO SEQRES 9 A 773 ALA VAL VAL ASP ILE TYR GLU TYR ASP ILE PRO PHE ALA SEQRES 10 A 773 LYS ARG TYR LEU ILE ASP ARG GLY LEU ILE PRO MET GLU SEQRES 11 A 773 GLY ASP GLU GLU LEU ARG MET LEU ALA PHE ASP ILE GLU SEQRES 12 A 773 THR LEU TYR HIS GLU GLY GLU GLU PHE GLY GLU GLY PRO SEQRES 13 A 773 ILE LEU MET ILE SER TYR ALA ASP GLU GLU GLY ALA ARG SEQRES 14 A 773 VAL ILE THR TRP LYS ASN ILE ASP LEU PRO TYR VAL GLU SEQRES 15 A 773 SER VAL SER THR GLU LYS GLU MET ILE LYS ARG PHE LEU SEQRES 16 A 773 LYS VAL ILE GLN GLU LYS ASP PRO ASP VAL LEU ILE THR SEQRES 17 A 773 TYR ASN GLY ASP ASN PHE ASP PHE ALA TYR LEU LYS LYS SEQRES 18 A 773 ARG SER GLU MET LEU GLY VAL LYS PHE ILE LEU GLY ARG SEQRES 19 A 773 ASP GLY SER GLU PRO LYS ILE GLN ARG MET GLY ASP ARG SEQRES 20 A 773 PHE ALA VAL GLU VAL LYS GLY ARG ILE HIS PHE ASP LEU SEQRES 21 A 773 TYR PRO VAL ILE ARG ARG THR ILE ASN LEU PRO THR TYR SEQRES 22 A 773 THR LEU GLU THR VAL TYR GLU PRO VAL PHE GLY GLN PRO SEQRES 23 A 773 LYS GLU LYS VAL TYR ALA GLU GLU ILE ALA ARG ALA TRP SEQRES 24 A 773 GLU SER GLY GLU GLY LEU GLU ARG VAL ALA ARG TYR SER SEQRES 25 A 773 MET GLU ASP ALA LYS ALA THR TYR GLU LEU GLY LYS GLU SEQRES 26 A 773 PHE PHE PRO MET GLU ALA GLN LEU SER ARG LEU VAL GLY SEQRES 27 A 773 GLN SER LEU TRP ASP VAL SER ARG SER SER THR GLY ASN SEQRES 28 A 773 LEU VAL GLU TRP PHE LEU LEU ARG LYS ALA TYR GLU ARG SEQRES 29 A 773 ASN ASP VAL ALA PRO ASN LYS PRO ASP GLU ARG GLU LEU SEQRES 30 A 773 ALA ARG ARG THR GLU SER TYR ALA GLY GLY TYR VAL LYS SEQRES 31 A 773 GLU PRO GLU LYS GLY LEU TRP GLU ASN ILE VAL TYR LEU SEQRES 32 A 773 ASP TYR LYS SER LEU TYR PRO SER ILE ILE ILE THR HIS SEQRES 33 A 773 ASN VAL SER PRO ASP THR LEU ASN ARG GLU GLY CYS ARG SEQRES 34 A 773 GLU TYR ASP VAL ALA PRO GLN VAL GLY HIS ARG PHE CYS SEQRES 35 A 773 LYS ASP PHE PRO GLY PHE ILE PRO SER LEU LEU GLY ASP SEQRES 36 A 773 LEU LEU GLU GLU ARG GLN LYS VAL LYS LYS LYS MET LYS SEQRES 37 A 773 ALA THR VAL ASP PRO ILE GLU ARG LYS LEU LEU ASP TYR SEQRES 38 A 773 ARG GLN ARG ALA ILE LYS ILE LEU ALA ASN SER TYR TYR SEQRES 39 A 773 GLY TYR TYR ALA TYR ALA ASN ALA ARG TRP TYR CYS ARG SEQRES 40 A 773 GLU CYS ALA GLU SER VAL THR ALA TRP GLY ARG GLN TYR SEQRES 41 A 773 ILE GLU THR THR MET ARG GLU ILE GLU GLU LYS PHE GLY SEQRES 42 A 773 PHE LYS VAL LEU TYR ALA ASP THR ASP GLY PHE PHE ALA SEQRES 43 A 773 THR ILE PRO GLY ALA ASP ALA GLU THR VAL LYS ASN LYS SEQRES 44 A 773 ALA LYS GLU PHE LEU ASN TYR ILE ASN PRO ARG LEU PRO SEQRES 45 A 773 GLY LEU LEU GLU LEU GLU TYR GLU GLY PHE TYR ARG ARG SEQRES 46 A 773 GLY PHE PHE VAL THR LYS LYS LYS TYR ALA VAL ILE ASP SEQRES 47 A 773 GLU GLU ASP LYS ILE THR THR ARG GLY LEU GLU ILE VAL SEQRES 48 A 773 ARG ARG ASP TRP SER GLU ILE ALA LYS GLU THR GLN ALA SEQRES 49 A 773 ARG VAL LEU GLU ALA ILE LEU LYS HIS GLY ASP VAL GLU SEQRES 50 A 773 GLU ALA VAL ARG ILE VAL LYS GLU VAL THR GLU LYS LEU SEQRES 51 A 773 SER ARG HIS GLU VAL PRO PRO GLU LYS LEU VAL ILE TYR SEQRES 52 A 773 GLU GLN ILE THR ARG ASP LEU ARG SER TYR ARG ALA THR SEQRES 53 A 773 GLY PRO HIS VAL ALA VAL ALA LYS ARG LEU ALA ALA ARG SEQRES 54 A 773 GLY ILE LYS ILE ARG PRO GLY THR VAL ILE SER TYR ILE SEQRES 55 A 773 VAL LEU LYS GLY PRO GLY ARG VAL GLY ASP ARG ALA ILE SEQRES 56 A 773 PRO PHE ASP GLU PHE ASP PRO ALA LYS HIS ARG TYR ASP SEQRES 57 A 773 ALA GLU TYR TYR ILE GLU ASN GLN VAL LEU PRO ALA VAL SEQRES 58 A 773 GLU ARG ILE LEU ARG ALA PHE GLY TYR ARG LYS GLU ASP SEQRES 59 A 773 LEU ARG TYR GLN LYS THR LYS GLN ALA GLY LEU GLY ALA SEQRES 60 A 773 TRP LEU LYS PRO LYS THR HET SO4 A1091 5 HET SO4 A1130 5 HET SO4 A1487 5 HET SO4 A1606 5 HET MG A3030 1 HET MG A3031 1 HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 MG 2(MG 2+) FORMUL 8 HOH *116(H2 O) HELIX 1 1 ASP A 44 SER A 46 5 3 HELIX 2 2 ALA A 47 LYS A 52 1 6 HELIX 3 3 GLN A 91 GLU A 102 1 12 HELIX 4 4 PRO A 115 ARG A 124 1 10 HELIX 5 5 THR A 186 ASP A 202 1 17 HELIX 6 6 ASP A 215 LYS A 220 1 6 HELIX 7 7 LYS A 220 MET A 225 1 6 HELIX 8 8 LEU A 260 ILE A 268 1 9 HELIX 9 9 THR A 274 GLY A 284 1 11 HELIX 10 10 ALA A 292 GLU A 300 1 9 HELIX 11 11 GLY A 304 GLY A 338 1 35 HELIX 12 12 SER A 340 SER A 345 1 6 HELIX 13 13 SER A 348 ARG A 364 1 17 HELIX 14 14 ASP A 373 ARG A 380 1 8 HELIX 15 15 SER A 407 ASN A 417 1 11 HELIX 16 16 GLY A 447 THR A 470 1 24 HELIX 17 17 ASP A 472 ASN A 491 1 20 HELIX 18 18 SER A 492 ALA A 498 1 7 HELIX 19 19 CYS A 506 GLY A 533 1 28 HELIX 20 20 ASP A 552 ASN A 568 1 17 HELIX 21 21 SER A 616 LYS A 632 1 17 HELIX 22 22 ASP A 635 LEU A 650 1 16 HELIX 23 23 PRO A 656 VAL A 661 5 6 HELIX 24 24 GLY A 677 ALA A 683 1 7 HELIX 25 25 ASP A 728 ASN A 735 1 8 HELIX 26 26 VAL A 737 ALA A 740 5 4 HELIX 27 27 VAL A 741 ALA A 747 1 7 HELIX 28 28 ARG A 751 LEU A 755 5 5 SHEET 1 A 3 ILE A 2 GLU A 10 0 SHEET 2 A 3 LYS A 13 GLU A 22 -1 O LYS A 13 N GLU A 10 SHEET 3 A 3 GLU A 25 ASP A 31 -1 O GLU A 25 N GLU A 22 SHEET 1 B 4 ALA A 68 LYS A 74 0 SHEET 2 B 4 PRO A 79 TYR A 86 -1 N VAL A 80 O LYS A 73 SHEET 3 B 4 TYR A 37 LEU A 42 -1 N ILE A 38 O LEU A 85 SHEET 4 B 4 VAL A 106 TYR A 110 -1 N VAL A 107 O LEU A 41 SHEET 1 C 2 ALA A 56 ARG A 58 0 SHEET 2 C 2 THR A 61 VAL A 63 -1 O THR A 61 N ARG A 58 SHEET 1 D 6 VAL A 181 SER A 183 0 SHEET 2 D 6 VAL A 170 THR A 172 1 O VAL A 170 N GLU A 182 SHEET 3 D 6 ILE A 157 ALA A 163 -1 O ILE A 160 N ILE A 171 SHEET 4 D 6 MET A 137 THR A 144 -1 N ALA A 139 O ALA A 163 SHEET 5 D 6 VAL A 205 THR A 208 1 O VAL A 205 N LEU A 138 SHEET 6 D 6 ILE A 256 ASP A 259 1 O ILE A 256 N LEU A 206 SHEET 1 E 2 LYS A 240 ARG A 243 0 SHEET 2 E 2 PHE A 248 GLU A 251 -1 O ALA A 249 N GLN A 242 SHEET 1 F 6 LYS A 535 ALA A 539 0 SHEET 2 F 6 PHE A 544 THR A 547 -1 O PHE A 545 N LEU A 537 SHEET 3 F 6 TRP A 397 TYR A 405 -1 N VAL A 401 O ALA A 546 SHEET 4 F 6 LEU A 577 THR A 590 -1 N GLU A 578 O ASP A 404 SHEET 5 F 6 LYS A 593 ILE A 597 -1 O LYS A 593 N VAL A 589 SHEET 6 F 6 ILE A 603 ARG A 606 -1 N THR A 604 O VAL A 596 SHEET 1 G 2 TYR A 431 VAL A 433 0 SHEET 2 G 2 ARG A 440 CYS A 442 -1 N PHE A 441 O ASP A 432 SHEET 1 H 3 ILE A 662 TYR A 663 0 SHEET 2 H 3 SER A 700 VAL A 703 -1 O TYR A 701 N ILE A 662 SHEET 3 H 3 ALA A 714 PRO A 716 -1 N ILE A 715 O ILE A 702 SSBOND 1 CYS A 428 CYS A 442 1555 1555 2.06 SSBOND 2 CYS A 506 CYS A 509 1555 1555 2.08 LINK OD1 ASP A 141 MG MG A3030 1555 1555 3.07 LINK OD2 ASP A 141 MG MG A3031 1555 1555 2.55 LINK OD1 ASP A 141 MG MG A3031 1555 1555 3.01 LINK OE2 GLU A 143 MG MG A3030 1555 1555 2.57 LINK OD1 ASP A 315 MG MG A3030 1555 1555 2.47 SITE 1 AC1 4 TYR A 7 GLN A 91 PRO A 115 PHE A 116 SITE 1 AC2 3 GLU A 130 ARG A 335 ARG A 482 SITE 1 AC3 3 LYS A 406 ARG A 460 LYS A 487 SITE 1 AC4 3 PHE A 545 TYR A 583 TYR A 594 SITE 1 AC5 3 ASP A 141 GLU A 143 ASP A 315 SITE 1 AC6 1 ASP A 141 CRYST1 66.100 107.600 155.900 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015129 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009294 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006414 0.00000