HEADER HYDROLASE 27-AUG-03 1QVJ TITLE STRUCTURE OF NUDT9 COMPLEXED WITH RIBOSE-5-PHOSPHATE CAVEAT 1QVJ RP5 A 554 HAS WRONG CHIRALITY AT ATOM C4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSE PYROPHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADP-RIBOSE DIPHOSPHATASE, ADENOSINE DIPHOSPHORIBOSE COMPND 5 PYROPHOSPHATASE, ADPR-PPASE, ADP-RIBOSE PHOSPHOHYDROLASE, NUCLEOSIDE COMPND 6 DIPHOSPHATE-LINKED MOIETY X MOTIF 9; COMPND 7 EC: 3.6.1.13; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDT9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: IRL+; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24B KEYWDS NUDIX, ADPRASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.W.SHEN,A.-L.PERRAUD,A.S.SCHARENBERG,B.L.STODDARD REVDAT 6 15-NOV-23 1QVJ 1 REMARK REVDAT 5 16-AUG-23 1QVJ 1 HETSYN REVDAT 4 29-JUL-20 1QVJ 1 CAVEAT REMARK SEQADV LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 13-JUL-11 1QVJ 1 VERSN REVDAT 2 24-FEB-09 1QVJ 1 VERSN REVDAT 1 16-SEP-03 1QVJ 0 JRNL AUTH B.W.SHEN,A.-L.PERRAUD,A.S.SCHARENBERG,B.L.STODDARD JRNL TITL THE CRYSTAL STRUCTURE AND MUTATIONAL ANALYSIS OF HUMAN NUDT9 JRNL REF J.MOL.BIOL. V. 332 385 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12948489 JRNL DOI 10.1016/S0022-2836(03)00954-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.L.PERRAUD,B.SHEN,C.A.DUNN,K.RIPPE,M.K.SMITH,M.J.BESSMAN, REMARK 1 AUTH 2 B.L.STODDARD,A.M.SCHARENBERG REMARK 1 TITL NUDT9, A MEMBER OF THE NUDIX HYDROLASE FAMILY, IS AN REMARK 1 TITL 2 EVOLUTIONARILY CONSERVED MITOCHONDRIAL ADP-RIBOSE REMARK 1 TITL 3 PYROPHOSPHOTASE REMARK 1 REF J.BIOL.CHEM. V. 278 1794 2002 REMARK 1 REFN ISSN 0021-9258 REMARK 1 DOI 10.1074/JBC.M205601200 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 57954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.600 REMARK 3 FREE R VALUE TEST SET COUNT : 5564 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 8124 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 876 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2330 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.70000 REMARK 3 B22 (A**2) : 6.19000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.800 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.520 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.350 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.370 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.000 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 47.57 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : TRIS_NEW.PARAM REMARK 3 PARAMETER FILE 5 : RBP.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : TRIS_NEW.TOP REMARK 3 TOPOLOGY FILE 5 : RBP.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-03. REMARK 100 THE DEPOSITION ID IS D_1000020119. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 170 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62416 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 41.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04300 REMARK 200 FOR THE DATA SET : 35.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.31100 REMARK 200 FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1Q33 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, MAGNISUM CHLORIDE, REMARK 280 TRISHCL, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.72750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 60.15400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.72750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.15400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.72750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.15400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.45000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.72750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.15400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 91 79.32 -156.75 REMARK 500 ASP A 128 74.30 -116.18 REMARK 500 THR A 242 108.20 -31.72 REMARK 500 SER A 243 159.03 -45.86 REMARK 500 ALA A 244 -44.20 75.30 REMARK 500 ASP A 296 -73.03 -35.70 REMARK 500 ASN A 297 43.08 -100.06 REMARK 500 ASP A 316 2.55 -65.15 REMARK 500 ALA A 322 -123.70 47.95 REMARK 500 TRP A 339 -56.23 -141.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 560 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 214 O REMARK 620 2 HOH A 443 O 105.0 REMARK 620 3 HOH A 549 O 96.9 95.7 REMARK 620 4 RP5 A 554 O3X 94.2 141.6 114.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 561 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 230 OE2 REMARK 620 2 HOH A 443 O 120.0 REMARK 620 3 HOH A 445 O 55.1 173.9 REMARK 620 4 HOH A 514 O 62.7 115.3 66.7 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q33 RELATED DB: PDB REMARK 900 NUDT9 DBREF 1QVJ A 59 350 UNP Q9BW91 NUDT9_HUMAN 59 350 SEQADV 1QVJ MSE A 188 UNP Q9BW91 MET 188 MODIFIED RESIDUE SEQADV 1QVJ MSE A 216 UNP Q9BW91 MET 216 MODIFIED RESIDUE SEQADV 1QVJ MSE A 280 UNP Q9BW91 MET 280 MODIFIED RESIDUE SEQADV 1QVJ MSE A 295 UNP Q9BW91 MET 295 MODIFIED RESIDUE SEQADV 1QVJ MSE A 299 UNP Q9BW91 MET 299 MODIFIED RESIDUE SEQRES 1 A 292 GLU ASN SER HIS ASN LYS ALA ARG THR SER PRO TYR PRO SEQRES 2 A 292 GLY SER LYS VAL GLU ARG SER GLN VAL PRO ASN GLU LYS SEQRES 3 A 292 VAL GLY TRP LEU VAL GLU TRP GLN ASP TYR LYS PRO VAL SEQRES 4 A 292 GLU TYR THR ALA VAL SER VAL LEU ALA GLY PRO ARG TRP SEQRES 5 A 292 ALA ASP PRO GLN ILE SER GLU SER ASN PHE SER PRO LYS SEQRES 6 A 292 PHE ASN GLU LYS ASP GLY HIS VAL GLU ARG LYS SER LYS SEQRES 7 A 292 ASN GLY LEU TYR GLU ILE GLU ASN GLY ARG PRO ARG ASN SEQRES 8 A 292 PRO ALA GLY ARG THR GLY LEU VAL GLY ARG GLY LEU LEU SEQRES 9 A 292 GLY ARG TRP GLY PRO ASN HIS ALA ALA ASP PRO ILE ILE SEQRES 10 A 292 THR ARG TRP LYS ARG ASP SER SER GLY ASN LYS ILE MSE SEQRES 11 A 292 HIS PRO VAL SER GLY LYS HIS ILE LEU GLN PHE VAL ALA SEQRES 12 A 292 ILE LYS ARG LYS ASP CYS GLY GLU TRP ALA ILE PRO GLY SEQRES 13 A 292 GLY MSE VAL ASP PRO GLY GLU LYS ILE SER ALA THR LEU SEQRES 14 A 292 LYS ARG GLU PHE GLY GLU GLU ALA LEU ASN SER LEU GLN SEQRES 15 A 292 LYS THR SER ALA GLU LYS ARG GLU ILE GLU GLU LYS LEU SEQRES 16 A 292 HIS LYS LEU PHE SER GLN ASP HIS LEU VAL ILE TYR LYS SEQRES 17 A 292 GLY TYR VAL ASP ASP PRO ARG ASN THR ASP ASN ALA TRP SEQRES 18 A 292 MSE GLU THR GLU ALA VAL ASN TYR HIS ASP GLU THR GLY SEQRES 19 A 292 GLU ILE MSE ASP ASN LEU MSE LEU GLU ALA GLY ASP ASP SEQRES 20 A 292 ALA GLY LYS VAL LYS TRP VAL ASP ILE ASN ASP LYS LEU SEQRES 21 A 292 LYS LEU TYR ALA SER HIS SER GLN PHE ILE LYS LEU VAL SEQRES 22 A 292 ALA GLU LYS ARG ASP ALA HIS TRP SER GLU ASP SER GLU SEQRES 23 A 292 ALA ASP CYS HIS ALA LEU MODRES 1QVJ MSE A 188 MET SELENOMETHIONINE MODRES 1QVJ MSE A 216 MET SELENOMETHIONINE MODRES 1QVJ MSE A 280 MET SELENOMETHIONINE MODRES 1QVJ MSE A 295 MET SELENOMETHIONINE MODRES 1QVJ MSE A 299 MET SELENOMETHIONINE HET MSE A 188 8 HET MSE A 216 8 HET MSE A 280 8 HET MSE A 295 8 HET MSE A 299 16 HET SO4 A 555 5 HET SO4 A 556 5 HET SO4 A 557 5 HET SO4 A 558 5 HET SO4 A 559 5 HET MG A 560 1 HET MG A 561 1 HET TRS A 553 8 HET RP5 A 554 14 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM RP5 5-O-PHOSPHONO-BETA-D-RIBOFURANOSE HETSYN TRS TRIS BUFFER HETSYN RP5 [(2R,3S,4S,5R)-3,4,5-TRIHYDROXYTETRAHYDROFURAN-2- HETSYN 2 RP5 YL]METHYL DIHYDROGEN PHOSPHATE; 5-O-PHOSPHONO-BETA-D- HETSYN 3 RP5 RIBOSE; 5-O-PHOSPHONO-D-RIBOSE; 5-O-PHOSPHONO-RIBOSE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 MG 2(MG 2+) FORMUL 9 TRS C4 H12 N O3 1+ FORMUL 10 RP5 C5 H11 O8 P FORMUL 11 HOH *202(H2 O) HELIX 1 1 ASN A 63 THR A 67 5 5 HELIX 2 2 PRO A 81 VAL A 85 5 5 HELIX 3 3 ALA A 101 ALA A 106 1 6 HELIX 4 4 LYS A 222 LEU A 236 1 15 HELIX 5 5 ASN A 237 LYS A 241 5 5 HELIX 6 6 ALA A 244 GLN A 259 1 16 HELIX 7 7 GLY A 292 ASN A 297 1 6 HELIX 8 8 SER A 323 ASP A 336 1 14 HELIX 9 9 GLU A 344 HIS A 348 5 5 SHEET 1 A 2 VAL A 97 THR A 100 0 SHEET 2 A 2 LEU A 156 GLY A 160 1 O VAL A 157 N VAL A 97 SHEET 1 B 2 LYS A 127 ASP A 128 0 SHEET 2 B 2 VAL A 131 GLU A 132 -1 O VAL A 131 N ASP A 128 SHEET 1 C 2 ILE A 142 GLU A 143 0 SHEET 2 C 2 ARG A 146 PRO A 147 -1 O ARG A 146 N GLU A 143 SHEET 1 D 5 TRP A 210 ALA A 211 0 SHEET 2 D 5 LEU A 197 ARG A 204 -1 N ILE A 202 O ALA A 211 SHEET 3 D 5 GLY A 166 TRP A 178 -1 N ARG A 177 O GLN A 198 SHEET 4 D 5 ALA A 278 ASP A 289 1 O VAL A 285 N ILE A 174 SHEET 5 D 5 LEU A 262 TYR A 268 -1 N LEU A 262 O ASN A 286 SHEET 1 E 4 GLY A 215 MSE A 216 0 SHEET 2 E 4 GLY A 166 TRP A 178 -1 N ALA A 171 O GLY A 215 SHEET 3 E 4 LEU A 197 ARG A 204 -1 O GLN A 198 N ARG A 177 SHEET 4 E 4 ALA A 306 ASP A 313 -1 O GLY A 307 N LYS A 203 SSBOND 1 CYS A 207 CYS A 347 1555 2665 2.75 LINK C ILE A 187 N MSE A 188 1555 1555 1.32 LINK C MSE A 188 N HIS A 189 1555 1555 1.33 LINK C GLY A 215 N MSE A 216 1555 1555 1.33 LINK C MSE A 216 N VAL A 217 1555 1555 1.33 LINK C TRP A 279 N MSE A 280 1555 1555 1.32 LINK C MSE A 280 N GLU A 281 1555 1555 1.33 LINK C ILE A 294 N MSE A 295 1555 1555 1.33 LINK C MSE A 295 N ASP A 296 1555 1555 1.33 LINK C LEU A 298 N AMSE A 299 1555 1555 1.33 LINK C LEU A 298 N BMSE A 299 1555 1555 1.33 LINK C BMSE A 299 N LEU A 300 1555 1555 1.33 LINK C AMSE A 299 N LEU A 300 1555 1555 1.33 LINK O GLY A 214 MG MG A 560 1555 1555 2.90 LINK OE2 GLU A 230 MG MG A 561 1555 1555 2.97 LINK O HOH A 443 MG MG A 560 1555 1555 2.71 LINK O HOH A 443 MG MG A 561 1555 1555 2.88 LINK O HOH A 445 MG MG A 561 1555 1555 2.88 LINK O HOH A 514 MG MG A 561 1555 1555 2.80 LINK O HOH A 549 MG MG A 560 1555 1555 2.92 LINK O3X RP5 A 554 MG MG A 560 1555 1555 2.75 CISPEP 1 SER A 68 PRO A 69 0 -0.48 CRYST1 78.900 87.455 120.308 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012674 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011434 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008312 0.00000