HEADER UNKNOWN FUNCTION 16-SEP-03 1QZ8 TITLE CRYSTAL STRUCTURE OF SARS CORONAVIRUS NSP9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYPROTEIN 1AB; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SARS CORONAVIRUS NSP9, RESIDUES 4118-4230; COMPND 5 SYNONYM: NSP9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 227859; SOURCE 4 STRAIN: FRANKFURT 1; SOURCE 5 GENE: NSP9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS SARS, REPLICATION, NSP9, CORONAVIRUS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.P.EGLOFF,F.FERRON,V.CAMPANACCI,S.LONGHI,C.RANCUREL,H.DUTARTRE, AUTHOR 2 E.J.SNIJDER,A.E.GORBALENYA,C.CAMBILLAU,B.CANARD REVDAT 5 14-FEB-24 1QZ8 1 REMARK REVDAT 4 13-JUL-11 1QZ8 1 VERSN REVDAT 3 24-FEB-09 1QZ8 1 VERSN REVDAT 2 23-MAR-04 1QZ8 1 JRNL REVDAT 1 24-FEB-04 1QZ8 0 JRNL AUTH M.P.EGLOFF,F.FERRON,V.CAMPANACCI,S.LONGHI,C.RANCUREL, JRNL AUTH 2 H.DUTARTRE,E.J.SNIJDER,A.E.GORBALENYA,C.CAMBILLAU,B.CANARD JRNL TITL THE SEVERE ACUTE RESPIRATORY SYNDROME-CORONAVIRUS JRNL TITL 2 REPLICATIVE PROTEIN NSP9 IS A SINGLE-STRANDED RNA-BINDING JRNL TITL 3 SUBUNIT UNIQUE IN THE RNA VIRUS WORLD. JRNL REF PROC.NATL.ACAD.SCI.USA V. 101 3792 2004 JRNL REFN ISSN 0027-8424 JRNL PMID 15007178 JRNL DOI 10.1073/PNAS.0307877101 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH V.CAMPANACCI,M.P.EGLOFF,S.LONGHI,F.FERRON,C.RANCUREL, REMARK 1 AUTH 2 A.SALOMONI,C.DUROUSSEAU,F.TOCQUE,N.BREMOND,J.C.DOBBE, REMARK 1 AUTH 3 E.J.SNIJDER,B.CANARD,C.CAMBILLAU REMARK 1 TITL STRUCTURAL GENOMICS OF THE SARS CORONAVIRUS: CLONING, REMARK 1 TITL 2 EXPRESSION, CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 3 STUDY OF THE NSP9 PROTEIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 59 1628 2003 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444903016779 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 8724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 443 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 623 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 25 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1699 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.23000 REMARK 3 B22 (A**2) : -2.23000 REMARK 3 B33 (A**2) : 3.34000 REMARK 3 B12 (A**2) : -1.11000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.688 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.346 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.254 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.262 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1749 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1578 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2374 ; 1.880 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3675 ; 1.010 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 219 ; 9.190 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 267 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1921 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 349 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 329 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1878 ; 0.243 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1207 ; 0.099 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 36 ; 0.225 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.277 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 63 ; 0.366 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.196 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1097 ; 0.868 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1760 ; 1.663 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 652 ; 2.143 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 614 ; 3.451 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 8 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 11 A 33 4 REMARK 3 1 B 11 B 33 4 REMARK 3 2 A 34 A 41 6 REMARK 3 2 B 34 B 41 6 REMARK 3 3 A 42 A 54 3 REMARK 3 3 B 42 B 54 3 REMARK 3 4 A 55 A 64 4 REMARK 3 4 B 55 B 64 4 REMARK 3 5 A 65 A 75 3 REMARK 3 5 B 65 B 75 3 REMARK 3 6 A 75 A 86 6 REMARK 3 6 B 75 B 86 6 REMARK 3 7 A 87 A 95 3 REMARK 3 7 B 87 B 95 3 REMARK 3 8 A 96 A 113 4 REMARK 3 8 B 96 B 113 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 195 ; 0.07 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 671 ; 0.87 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 644 ; 0.93 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 195 ; 0.12 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 671 ; 0.50 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 644 ; 3.25 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7215 67.3787 91.9774 REMARK 3 T TENSOR REMARK 3 T11: 0.2243 T22: 0.1027 REMARK 3 T33: 0.0907 T12: -0.0022 REMARK 3 T13: -0.0381 T23: -0.0504 REMARK 3 L TENSOR REMARK 3 L11: 2.0251 L22: 4.4250 REMARK 3 L33: 3.3110 L12: 1.2777 REMARK 3 L13: 1.6283 L23: 2.3802 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: 0.0115 S13: 0.1175 REMARK 3 S21: 0.1055 S22: 0.1350 S23: -0.1861 REMARK 3 S31: -0.0895 S32: 0.1656 S33: -0.0612 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 113 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9432 62.1063 77.8700 REMARK 3 T TENSOR REMARK 3 T11: 0.1530 T22: 0.0852 REMARK 3 T33: 0.0792 T12: 0.0101 REMARK 3 T13: 0.0302 T23: 0.0806 REMARK 3 L TENSOR REMARK 3 L11: 5.3777 L22: 3.7367 REMARK 3 L33: 1.5992 L12: 0.6518 REMARK 3 L13: 0.0759 L23: 0.1153 REMARK 3 S TENSOR REMARK 3 S11: 0.0304 S12: 0.0306 S13: 0.2612 REMARK 3 S21: -0.2097 S22: -0.0164 S23: 0.0002 REMARK 3 S31: 0.2424 S32: -0.2612 S33: -0.0140 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1QZ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-SEP-03. REMARK 100 THE DEPOSITION ID IS D_1000020249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9345 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 14.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, NA CITRATE, PH 4.2, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.55833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.11667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 68.33750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 113.89583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.77917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.55833 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 91.11667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 113.89583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 68.33750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 22.77917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -167.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 205.01250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 1 REMARK 465 ASN A 2 REMARK 465 ASN B 1 REMARK 465 ASN B 2 REMARK 465 GLU B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 SO4 A 691 O HOH A 709 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 4 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 ASP A 50 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 CYS A 73 CB - CA - C ANGL. DEV. = -13.1 DEGREES REMARK 500 ASP A 78 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 26 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 6 -148.47 -52.13 REMARK 500 VAL A 7 77.59 91.60 REMARK 500 ASP A 26 75.88 60.51 REMARK 500 SER A 35 121.44 -26.56 REMARK 500 LYS A 36 -96.66 90.46 REMARK 500 ASP A 60 -61.59 -23.87 REMARK 500 THR B 24 -126.11 -91.33 REMARK 500 SER B 35 124.72 -175.21 REMARK 500 LYS B 36 18.40 52.89 REMARK 500 LYS B 81 39.42 -88.54 REMARK 500 ARG B 111 93.41 -67.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 6 VAL A 7 145.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 691 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 692 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 693 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 695 DBREF 1QZ8 A 1 113 UNP P59641 R1AB_CVHSA 4118 4230 DBREF 1QZ8 B 1 113 UNP P59641 R1AB_CVHSA 4118 4230 SEQRES 1 A 113 ASN ASN GLU LEU SER PRO VAL ALA LEU ARG GLN MET SER SEQRES 2 A 113 CYS ALA ALA GLY THR THR GLN THR ALA CYS THR ASP ASP SEQRES 3 A 113 ASN ALA LEU ALA TYR TYR ASN ASN SER LYS GLY GLY ARG SEQRES 4 A 113 PHE VAL LEU ALA LEU LEU SER ASP HIS GLN ASP LEU LYS SEQRES 5 A 113 TRP ALA ARG PHE PRO LYS SER ASP GLY THR GLY THR ILE SEQRES 6 A 113 TYR THR GLU LEU GLU PRO PRO CYS ARG PHE VAL THR ASP SEQRES 7 A 113 THR PRO LYS GLY PRO LYS VAL LYS TYR LEU TYR PHE ILE SEQRES 8 A 113 LYS GLY LEU ASN ASN LEU ASN ARG GLY MET VAL LEU GLY SEQRES 9 A 113 SER LEU ALA ALA THR VAL ARG LEU GLN SEQRES 1 B 113 ASN ASN GLU LEU SER PRO VAL ALA LEU ARG GLN MET SER SEQRES 2 B 113 CYS ALA ALA GLY THR THR GLN THR ALA CYS THR ASP ASP SEQRES 3 B 113 ASN ALA LEU ALA TYR TYR ASN ASN SER LYS GLY GLY ARG SEQRES 4 B 113 PHE VAL LEU ALA LEU LEU SER ASP HIS GLN ASP LEU LYS SEQRES 5 B 113 TRP ALA ARG PHE PRO LYS SER ASP GLY THR GLY THR ILE SEQRES 6 B 113 TYR THR GLU LEU GLU PRO PRO CYS ARG PHE VAL THR ASP SEQRES 7 B 113 THR PRO LYS GLY PRO LYS VAL LYS TYR LEU TYR PHE ILE SEQRES 8 B 113 LYS GLY LEU ASN ASN LEU ASN ARG GLY MET VAL LEU GLY SEQRES 9 B 113 SER LEU ALA ALA THR VAL ARG LEU GLN HET SO4 A 691 5 HET SO4 A 692 5 HET SO4 A 693 5 HET SO4 B 695 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *31(H2 O) HELIX 1 1 ASN A 95 VAL A 110 1 16 HELIX 2 2 ASN B 95 VAL B 110 1 16 SHEET 1 A 7 THR A 64 GLU A 68 0 SHEET 2 A 7 TRP A 53 PRO A 57 -1 N PHE A 56 O ILE A 65 SHEET 3 A 7 ARG A 10 GLY A 17 -1 N ALA A 15 O ARG A 55 SHEET 4 A 7 THR A 24 ASN A 33 -1 O TYR A 32 N ARG A 10 SHEET 5 A 7 PHE A 40 SER A 46 -1 O PHE A 40 N ASN A 33 SHEET 6 A 7 LYS A 84 PHE A 90 -1 O TYR A 89 N LEU A 44 SHEET 7 A 7 CYS A 73 THR A 77 -1 N THR A 77 O LYS A 84 SHEET 1 B 7 THR B 64 GLU B 68 0 SHEET 2 B 7 TRP B 53 PRO B 57 -1 N PHE B 56 O ILE B 65 SHEET 3 B 7 ARG B 10 GLY B 17 -1 N GLY B 17 O TRP B 53 SHEET 4 B 7 ALA B 28 SER B 35 -1 O ALA B 30 N MET B 12 SHEET 5 B 7 GLY B 38 SER B 46 -1 O LEU B 45 N LEU B 29 SHEET 6 B 7 GLY B 82 PHE B 90 -1 O TYR B 89 N LEU B 44 SHEET 7 B 7 CYS B 73 THR B 79 -1 N THR B 77 O LYS B 84 SITE 1 AC1 7 GLU A 68 ASN A 95 ASN A 96 LEU A 97 SITE 2 AC1 7 SO4 A 692 HOH A 709 ASN B 96 SITE 1 AC2 7 LYS A 52 ASN A 96 SO4 A 691 HOH A 709 SITE 2 AC2 7 ASN B 95 ASN B 96 LEU B 97 SITE 1 AC3 2 HIS A 48 GLN A 49 SITE 1 AC4 2 ARG B 10 ASN B 34 CRYST1 89.115 89.115 136.675 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011221 0.006479 0.000000 0.00000 SCALE2 0.000000 0.012957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007317 0.00000