data_1R0Q # _entry.id 1R0Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1R0Q RCSB RCSB020298 WWPDB D_1000020298 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1QYZ _pdbx_database_related.details 'The same protein before heating at 343K for 1 hour' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R0Q _pdbx_database_status.recvd_initial_deposition_date 2003-09-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fee, J.A.' 1 'Todaro, T.R.' 2 'Luna, E.' 3 'Sanders, D.' 4 'Hunsicker-Wang, L.M.' 5 'Patel, K.M.' 6 'Bren, K.L.' 7 'Gomez-Moran, E.' 8 'Hill, M.G.' 9 'Ai, J.' 10 'Loehr, T.M.' 11 'Oertling, W.A.' 12 'Williams, P.A.' 13 'Stout, C.D.' 14 'McRee, D.' 15 'Pastuszyn, A.' 16 # _citation.id primary _citation.title ;Cytochrome rC552, formed during expression of the truncated, Thermus thermophilus cytochrome c552 gene in the cytoplasm of Escherichia coli, reacts spontaneously to form protein-bound 2-formyl-4-vinyl (Spirographis) heme. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 43 _citation.page_first 12162 _citation.page_last 12176 _citation.year 2004 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15379555 _citation.pdbx_database_id_DOI 10.1021/bi048968l # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fee, J.A.' 1 primary 'Todaro, T.R.' 2 primary 'Luna, E.' 3 primary 'Sanders, D.' 4 primary 'Hunsicker-Wang, L.M.' 5 primary 'Patel, K.M.' 6 primary 'Bren, K.L.' 7 primary 'Gomez-Moran, E.' 8 primary 'Hill, M.G.' 9 primary 'Ai, J.' 10 primary 'Loehr, T.M.' 11 primary 'Oertling, W.A.' 12 primary 'Williams, P.A.' 13 primary 'Stout, C.D.' 14 primary 'McRee, D.' 15 primary 'Pastuszyn, A.' 16 # _cell.entry_id 1R0Q _cell.length_a 86.770 _cell.length_b 86.770 _cell.length_c 31.840 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R0Q _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c-552' 14194.575 1 ? ? ? ? 2 non-polymer syn '2-FORMYL-PROTOPORPHRYN IX' 620.476 1 ? ? ? ? 3 water nat water 18.015 136 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name C552 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QADGAKIYAQCAGCHQQNGQGIPGAFPPLAGHVAEILAKEGGREYLILVLLYGLQGQIEVKGMKYNGVMSSFAQLKDEEI AAVLNHIATAWGDAKKVKGFKPFTAEEVKKLRAKKLTPQQVLAERKKLGLK ; _entity_poly.pdbx_seq_one_letter_code_can ;QADGAKIYAQCAGCHQQNGQGIPGAFPPLAGHVAEILAKEGGREYLILVLLYGLQGQIEVKGMKYNGVMSSFAQLKDEEI AAVLNHIATAWGDAKKVKGFKPFTAEEVKKLRAKKLTPQQVLAERKKLGLK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 ASP n 1 4 GLY n 1 5 ALA n 1 6 LYS n 1 7 ILE n 1 8 TYR n 1 9 ALA n 1 10 GLN n 1 11 CYS n 1 12 ALA n 1 13 GLY n 1 14 CYS n 1 15 HIS n 1 16 GLN n 1 17 GLN n 1 18 ASN n 1 19 GLY n 1 20 GLN n 1 21 GLY n 1 22 ILE n 1 23 PRO n 1 24 GLY n 1 25 ALA n 1 26 PHE n 1 27 PRO n 1 28 PRO n 1 29 LEU n 1 30 ALA n 1 31 GLY n 1 32 HIS n 1 33 VAL n 1 34 ALA n 1 35 GLU n 1 36 ILE n 1 37 LEU n 1 38 ALA n 1 39 LYS n 1 40 GLU n 1 41 GLY n 1 42 GLY n 1 43 ARG n 1 44 GLU n 1 45 TYR n 1 46 LEU n 1 47 ILE n 1 48 LEU n 1 49 VAL n 1 50 LEU n 1 51 LEU n 1 52 TYR n 1 53 GLY n 1 54 LEU n 1 55 GLN n 1 56 GLY n 1 57 GLN n 1 58 ILE n 1 59 GLU n 1 60 VAL n 1 61 LYS n 1 62 GLY n 1 63 MET n 1 64 LYS n 1 65 TYR n 1 66 ASN n 1 67 GLY n 1 68 VAL n 1 69 MET n 1 70 SER n 1 71 SER n 1 72 PHE n 1 73 ALA n 1 74 GLN n 1 75 LEU n 1 76 LYS n 1 77 ASP n 1 78 GLU n 1 79 GLU n 1 80 ILE n 1 81 ALA n 1 82 ALA n 1 83 VAL n 1 84 LEU n 1 85 ASN n 1 86 HIS n 1 87 ILE n 1 88 ALA n 1 89 THR n 1 90 ALA n 1 91 TRP n 1 92 GLY n 1 93 ASP n 1 94 ALA n 1 95 LYS n 1 96 LYS n 1 97 VAL n 1 98 LYS n 1 99 GLY n 1 100 PHE n 1 101 LYS n 1 102 PRO n 1 103 PHE n 1 104 THR n 1 105 ALA n 1 106 GLU n 1 107 GLU n 1 108 VAL n 1 109 LYS n 1 110 LYS n 1 111 LEU n 1 112 ARG n 1 113 ALA n 1 114 LYS n 1 115 LYS n 1 116 LEU n 1 117 THR n 1 118 PRO n 1 119 GLN n 1 120 GLN n 1 121 VAL n 1 122 LEU n 1 123 ALA n 1 124 GLU n 1 125 ARG n 1 126 LYS n 1 127 LYS n 1 128 LEU n 1 129 GLY n 1 130 LEU n 1 131 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene CYCA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C552_THETH _struct_ref.pdbx_db_accession P04164 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QADGAKIYAQCAGCHQQNGQGIPGAFPPLAGHVAEILAKEGGREYLILVLLYGLQGQIEVKGMKYNGVMSSFAQLKDEEI AAVLNHIATAWGDAKKVKGFKPFTAEEVKKLRAKKLTPQQVLAERKKLGLK ; _struct_ref.pdbx_align_begin 18 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1R0Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 131 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04164 _struct_ref_seq.db_align_beg 18 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 148 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 131 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HFM non-polymer . '2-FORMYL-PROTOPORPHRYN IX' ? 'C33 H32 Fe N4 O5' 620.476 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1R0Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.77 _exptl_crystal.density_percent_sol 49.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_details 'MPEG 5K, imidazole-malate buffer, NaCl, pH 6.3, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 1998-11-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Flat mirror (vertical focusing), single crystal Si(311) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 1R0Q _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.61 _reflns.number_obs 16127 _reflns.number_all 17825 _reflns.percent_possible_obs 90.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_sigmaI 15.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.61 _reflns_shell.d_res_low 1.65 _reflns_shell.percent_possible_all 87 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.42 _reflns_shell.meanI_over_sigI_obs 4.0 _reflns_shell.pdbx_redundancy 5.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1084 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R0Q _refine.ls_number_reflns_obs 15332 _refine.ls_number_reflns_all 15338 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.61 _refine.ls_percent_reflns_obs 84.8 _refine.ls_R_factor_obs 0.1893 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.187 _refine.ls_R_factor_R_free 0.2548 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 789 _refine.ls_number_parameters 4713 _refine.ls_number_restraints 4206 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY 1%' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1R0Q _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 2 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 1167.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 992 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 1171 _refine_hist.d_res_high 1.61 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.022 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0252 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.034 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.041 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.069 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1R0Q _pdbx_refine.R_factor_all_no_cutoff 0.187 _pdbx_refine.R_factor_obs_no_cutoff 0.1863 _pdbx_refine.free_R_factor_no_cutoff 0.2548 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.1 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 789 _pdbx_refine.R_factor_all_4sig_cutoff 0.1706 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1699 _pdbx_refine.free_R_factor_4sig_cutoff 0.2303 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.1 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 680 _pdbx_refine.number_reflns_obs_4sig_cutoff 13314 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1R0Q _struct.title 'Characterization of the conversion of the malformed, recombinant cytochrome rc552 to a 2-formyl-4-vinyl (Spirographis) heme' _struct.pdbx_descriptor 'Cytochrome c-552, 2-FORMYL-PROTOPORPHRYN IX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R0Q _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'malformed cytochrome c, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 3 ? GLN A 10 ? ASP A 3 GLN A 10 1 ? 8 HELX_P HELX_P2 2 HIS A 32 ? ALA A 38 ? HIS A 32 ALA A 38 1 ? 7 HELX_P HELX_P3 3 GLY A 41 ? GLY A 53 ? GLY A 41 GLY A 53 1 ? 13 HELX_P HELX_P4 4 LYS A 76 ? ALA A 90 ? LYS A 76 ALA A 90 1 ? 15 HELX_P HELX_P5 5 GLY A 92 ? LYS A 96 ? GLY A 92 LYS A 96 5 ? 5 HELX_P HELX_P6 6 THR A 104 ? ALA A 113 ? THR A 104 ALA A 113 1 ? 10 HELX_P HELX_P7 7 THR A 117 ? LEU A 128 ? THR A 117 LEU A 128 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 15 NE2 ? ? ? 1_555 B HFM . FE ? ? A HIS 15 A HFM 200 1_555 ? ? ? ? ? ? ? 2.039 ? metalc2 metalc ? ? A MET 69 SD ? ? ? 1_555 B HFM . FE ? ? A MET 69 A HFM 200 1_555 ? ? ? ? ? ? ? 2.307 ? covale1 covale ? ? A CYS 14 SG ? ? ? 1_555 B HFM . CAC ? ? A CYS 14 A HFM 200 1_555 ? ? ? ? ? ? ? 1.904 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 54 ? VAL A 60 ? LEU A 54 VAL A 60 A 2 MET A 63 ? MET A 69 ? MET A 63 MET A 69 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 54 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 54 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id MET _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 69 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id MET _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 69 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE HFM A 200' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 TYR A 8 ? TYR A 8 . ? 1_555 ? 2 AC1 17 CYS A 14 ? CYS A 14 . ? 1_555 ? 3 AC1 17 HIS A 15 ? HIS A 15 . ? 1_555 ? 4 AC1 17 ALA A 25 ? ALA A 25 . ? 1_555 ? 5 AC1 17 PRO A 27 ? PRO A 27 . ? 1_555 ? 6 AC1 17 HIS A 32 ? HIS A 32 . ? 1_555 ? 7 AC1 17 TYR A 45 ? TYR A 45 . ? 1_555 ? 8 AC1 17 LEU A 46 ? LEU A 46 . ? 1_555 ? 9 AC1 17 GLN A 55 ? GLN A 55 . ? 1_555 ? 10 AC1 17 GLY A 56 ? GLY A 56 . ? 1_555 ? 11 AC1 17 VAL A 60 ? VAL A 60 . ? 1_555 ? 12 AC1 17 GLY A 67 ? GLY A 67 . ? 1_555 ? 13 AC1 17 VAL A 68 ? VAL A 68 . ? 1_555 ? 14 AC1 17 MET A 69 ? MET A 69 . ? 1_555 ? 15 AC1 17 VAL A 83 ? VAL A 83 . ? 1_555 ? 16 AC1 17 GLU A 106 ? GLU A 106 . ? 1_556 ? 17 AC1 17 ARG A 125 ? ARG A 125 . ? 1_555 ? # _database_PDB_matrix.entry_id 1R0Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 1R0Q _atom_sites.fract_transf_matrix[1][1] 0.011525 _atom_sites.fract_transf_matrix[1][2] 0.006654 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013308 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031407 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 MET 63 63 63 MET MET A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 TRP 91 91 91 TRP TRP A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 LYS 131 131 131 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HFM 1 200 200 HFM HEM A . C 3 HOH 1 1001 1001 HOH HOH A . C 3 HOH 2 1002 1002 HOH HOH A . C 3 HOH 3 1003 1003 HOH HOH A . C 3 HOH 4 1004 1004 HOH HOH A . C 3 HOH 5 1005 1005 HOH HOH A . C 3 HOH 6 1006 1006 HOH HOH A . C 3 HOH 7 1007 1007 HOH HOH A . C 3 HOH 8 1008 1008 HOH HOH A . C 3 HOH 9 1009 1009 HOH HOH A . C 3 HOH 10 1010 1010 HOH HOH A . C 3 HOH 11 1011 1011 HOH HOH A . C 3 HOH 12 1012 1012 HOH HOH A . C 3 HOH 13 1013 1013 HOH HOH A . C 3 HOH 14 1014 1014 HOH HOH A . C 3 HOH 15 1015 1015 HOH HOH A . C 3 HOH 16 1016 1016 HOH HOH A . C 3 HOH 17 1017 1017 HOH HOH A . C 3 HOH 18 1018 1018 HOH HOH A . C 3 HOH 19 1019 1019 HOH HOH A . C 3 HOH 20 1020 1020 HOH HOH A . C 3 HOH 21 1021 1021 HOH HOH A . C 3 HOH 22 1022 1022 HOH HOH A . C 3 HOH 23 1023 1023 HOH HOH A . C 3 HOH 24 1024 1024 HOH HOH A . C 3 HOH 25 1025 1025 HOH HOH A . C 3 HOH 26 1026 1026 HOH HOH A . C 3 HOH 27 1027 1027 HOH HOH A . C 3 HOH 28 1028 1028 HOH HOH A . C 3 HOH 29 1029 1029 HOH HOH A . C 3 HOH 30 1030 1030 HOH HOH A . C 3 HOH 31 1031 1031 HOH HOH A . C 3 HOH 32 1032 1032 HOH HOH A . C 3 HOH 33 1033 1033 HOH HOH A . C 3 HOH 34 1034 1034 HOH HOH A . C 3 HOH 35 1035 1035 HOH HOH A . C 3 HOH 36 1036 1036 HOH HOH A . C 3 HOH 37 1037 1037 HOH HOH A . C 3 HOH 38 1038 1038 HOH HOH A . C 3 HOH 39 1039 1039 HOH HOH A . C 3 HOH 40 1040 1040 HOH HOH A . C 3 HOH 41 1041 1041 HOH HOH A . C 3 HOH 42 1042 1042 HOH HOH A . C 3 HOH 43 1043 1043 HOH HOH A . C 3 HOH 44 1044 1044 HOH HOH A . C 3 HOH 45 1045 1045 HOH HOH A . C 3 HOH 46 1046 1046 HOH HOH A . C 3 HOH 47 1047 1047 HOH HOH A . C 3 HOH 48 1048 1048 HOH HOH A . C 3 HOH 49 1049 1049 HOH HOH A . C 3 HOH 50 1050 1050 HOH HOH A . C 3 HOH 51 1051 1051 HOH HOH A . C 3 HOH 52 1052 1052 HOH HOH A . C 3 HOH 53 1053 1053 HOH HOH A . C 3 HOH 54 1054 1054 HOH HOH A . C 3 HOH 55 1055 1055 HOH HOH A . C 3 HOH 56 1056 1056 HOH HOH A . C 3 HOH 57 1057 1057 HOH HOH A . C 3 HOH 58 1058 1058 HOH HOH A . C 3 HOH 59 1059 1059 HOH HOH A . C 3 HOH 60 1060 1060 HOH HOH A . C 3 HOH 61 1061 1061 HOH HOH A . C 3 HOH 62 1062 1062 HOH HOH A . C 3 HOH 63 1063 1063 HOH HOH A . C 3 HOH 64 1064 1064 HOH HOH A . C 3 HOH 65 1066 1066 HOH HOH A . C 3 HOH 66 1067 1067 HOH HOH A . C 3 HOH 67 1068 1068 HOH HOH A . C 3 HOH 68 1069 1069 HOH HOH A . C 3 HOH 69 1070 1070 HOH HOH A . C 3 HOH 70 1071 1071 HOH HOH A . C 3 HOH 71 1072 1072 HOH HOH A . C 3 HOH 72 1073 1073 HOH HOH A . C 3 HOH 73 1074 1074 HOH HOH A . C 3 HOH 74 1075 1075 HOH HOH A . C 3 HOH 75 1076 1076 HOH HOH A . C 3 HOH 76 1077 1077 HOH HOH A . C 3 HOH 77 1078 1078 HOH HOH A . C 3 HOH 78 1079 1079 HOH HOH A . C 3 HOH 79 1080 1080 HOH HOH A . C 3 HOH 80 1081 1081 HOH HOH A . C 3 HOH 81 1082 1082 HOH HOH A . C 3 HOH 82 1083 1083 HOH HOH A . C 3 HOH 83 1084 1084 HOH HOH A . C 3 HOH 84 1085 1085 HOH HOH A . C 3 HOH 85 1086 1086 HOH HOH A . C 3 HOH 86 1087 1087 HOH HOH A . C 3 HOH 87 1088 1088 HOH HOH A . C 3 HOH 88 1089 1089 HOH HOH A . C 3 HOH 89 1090 1090 HOH HOH A . C 3 HOH 90 1091 1091 HOH HOH A . C 3 HOH 91 1092 1092 HOH HOH A . C 3 HOH 92 1093 1093 HOH HOH A . C 3 HOH 93 1094 1094 HOH HOH A . C 3 HOH 94 1095 1095 HOH HOH A . C 3 HOH 95 1096 1096 HOH HOH A . C 3 HOH 96 1097 1097 HOH HOH A . C 3 HOH 97 1098 1098 HOH HOH A . C 3 HOH 98 1099 1099 HOH HOH A . C 3 HOH 99 1100 1100 HOH HOH A . C 3 HOH 100 1101 1101 HOH HOH A . C 3 HOH 101 1102 1102 HOH HOH A . C 3 HOH 102 1103 1103 HOH HOH A . C 3 HOH 103 1104 1104 HOH HOH A . C 3 HOH 104 1105 1105 HOH HOH A . C 3 HOH 105 1106 1106 HOH HOH A . C 3 HOH 106 1107 1107 HOH HOH A . C 3 HOH 107 1108 1108 HOH HOH A . C 3 HOH 108 1109 1109 HOH HOH A . C 3 HOH 109 1110 1110 HOH HOH A . C 3 HOH 110 1111 1111 HOH HOH A . C 3 HOH 111 1112 1112 HOH HOH A . C 3 HOH 112 1113 1113 HOH HOH A . C 3 HOH 113 1114 1114 HOH HOH A . C 3 HOH 114 1115 1115 HOH HOH A . C 3 HOH 115 1116 1116 HOH HOH A . C 3 HOH 116 1118 1118 HOH HOH A . C 3 HOH 117 1119 1119 HOH HOH A . C 3 HOH 118 1120 1120 HOH HOH A . C 3 HOH 119 1121 1121 HOH HOH A . C 3 HOH 120 1122 1122 HOH HOH A . C 3 HOH 121 1123 1123 HOH HOH A . C 3 HOH 122 1124 1124 HOH HOH A . C 3 HOH 123 1126 1126 HOH HOH A . C 3 HOH 124 1128 1128 HOH HOH A . C 3 HOH 125 1135 1135 HOH HOH A . C 3 HOH 126 1141 1141 HOH HOH A . C 3 HOH 127 1143 1143 HOH HOH A . C 3 HOH 128 1144 1144 HOH HOH A . C 3 HOH 129 1145 1145 HOH HOH A . C 3 HOH 130 1146 1146 HOH HOH A . C 3 HOH 131 1147 1147 HOH HOH A . C 3 HOH 132 1153 1153 HOH HOH A . C 3 HOH 133 1214 1214 HOH HOH A . C 3 HOH 134 1215 1215 HOH HOH A . C 3 HOH 135 1218 1218 HOH HOH A . C 3 HOH 136 1225 1225 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 NA ? B HFM . ? A HFM 200 ? 1_555 90.0 ? 2 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 NB ? B HFM . ? A HFM 200 ? 1_555 86.4 ? 3 NA ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 NB ? B HFM . ? A HFM 200 ? 1_555 90.5 ? 4 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 NC ? B HFM . ? A HFM 200 ? 1_555 89.8 ? 5 NA ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 NC ? B HFM . ? A HFM 200 ? 1_555 178.1 ? 6 NB ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 NC ? B HFM . ? A HFM 200 ? 1_555 91.3 ? 7 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 ND ? B HFM . ? A HFM 200 ? 1_555 93.7 ? 8 NA ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 ND ? B HFM . ? A HFM 200 ? 1_555 89.1 ? 9 NB ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 ND ? B HFM . ? A HFM 200 ? 1_555 179.6 ? 10 NC ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 ND ? B HFM . ? A HFM 200 ? 1_555 89.0 ? 11 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 SD ? A MET 69 ? A MET 69 ? 1_555 173.2 ? 12 NA ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 SD ? A MET 69 ? A MET 69 ? 1_555 83.2 ? 13 NB ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 SD ? A MET 69 ? A MET 69 ? 1_555 93.4 ? 14 NC ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 SD ? A MET 69 ? A MET 69 ? 1_555 97.1 ? 15 ND ? B HFM . ? A HFM 200 ? 1_555 FE ? B HFM . ? A HFM 200 ? 1_555 SD ? A MET 69 ? A MET 69 ? 1_555 86.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-28 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 SHELX phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 10 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 10 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.584 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation 0.355 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A GLN 10 ? ? C A GLN 10 ? ? O A GLN 10 ? ? 94.75 120.10 -25.35 2.10 N 2 1 O A GLN 10 ? ? C A GLN 10 ? ? N A CYS 11 ? ? 146.58 122.70 23.88 1.60 Y 3 1 NE A ARG 43 ? ? CZ A ARG 43 ? ? NH2 A ARG 43 ? ? 116.84 120.30 -3.46 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 16 ? ? 82.70 156.82 2 1 LYS A 96 ? ? -89.60 -71.44 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A CYS 11 ? CB ? A CYS 11 CB 2 1 Y 1 A CYS 11 ? SG ? A CYS 11 SG # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLN _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLN _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-FORMYL-PROTOPORPHRYN IX' HFM 3 water HOH #