data_1R1M # _entry.id 1R1M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1R1M RCSB RCSB020327 WWPDB D_1000020327 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R1M _pdbx_database_status.recvd_initial_deposition_date 2003-09-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Grizot, S.' 1 'Buchanan, S.K.' 2 # _citation.id primary _citation.title 'Structure of the OmpA-like domain of RmpM from Neisseria meningitidis' _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 51 _citation.page_first 1027 _citation.page_last 1037 _citation.year 2004 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14763978 _citation.pdbx_database_id_DOI 10.1111/j.1365-2958.2003.03903.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Grizot, S.' 1 primary 'Buchanan, S.K.' 2 # _cell.entry_id 1R1M _cell.length_a 63.500 _cell.length_b 63.500 _cell.length_c 83.860 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R1M _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Outer membrane protein class 4' 18333.705 1 ? ? 'C-TERMINAL DOMAIN' ? 2 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 3 water nat water 18.015 114 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLV SNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHHQHLEHH HHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;EQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLV SNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHHQHLEHH HHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 GLN n 1 3 ALA n 1 4 PRO n 1 5 GLN n 1 6 TYR n 1 7 VAL n 1 8 ASP n 1 9 GLU n 1 10 THR n 1 11 ILE n 1 12 SER n 1 13 LEU n 1 14 SER n 1 15 ALA n 1 16 LYS n 1 17 THR n 1 18 LEU n 1 19 PHE n 1 20 GLY n 1 21 PHE n 1 22 ASP n 1 23 LYS n 1 24 ASP n 1 25 SER n 1 26 LEU n 1 27 ARG n 1 28 ALA n 1 29 GLU n 1 30 ALA n 1 31 GLN n 1 32 ASP n 1 33 ASN n 1 34 LEU n 1 35 LYS n 1 36 VAL n 1 37 LEU n 1 38 ALA n 1 39 GLN n 1 40 ARG n 1 41 LEU n 1 42 SER n 1 43 ARG n 1 44 THR n 1 45 ASN n 1 46 ILE n 1 47 GLN n 1 48 SER n 1 49 VAL n 1 50 ARG n 1 51 VAL n 1 52 GLU n 1 53 GLY n 1 54 HIS n 1 55 THR n 1 56 ASP n 1 57 PHE n 1 58 MET n 1 59 GLY n 1 60 SER n 1 61 ASP n 1 62 LYS n 1 63 TYR n 1 64 ASN n 1 65 GLN n 1 66 ALA n 1 67 LEU n 1 68 SER n 1 69 GLU n 1 70 ARG n 1 71 ARG n 1 72 ALA n 1 73 TYR n 1 74 VAL n 1 75 VAL n 1 76 ALA n 1 77 ASN n 1 78 ASN n 1 79 LEU n 1 80 VAL n 1 81 SER n 1 82 ASN n 1 83 GLY n 1 84 VAL n 1 85 PRO n 1 86 VAL n 1 87 SER n 1 88 ARG n 1 89 ILE n 1 90 SER n 1 91 ALA n 1 92 VAL n 1 93 GLY n 1 94 LEU n 1 95 GLY n 1 96 GLU n 1 97 SER n 1 98 GLN n 1 99 ALA n 1 100 GLN n 1 101 MET n 1 102 THR n 1 103 GLN n 1 104 VAL n 1 105 CYS n 1 106 GLU n 1 107 ALA n 1 108 GLU n 1 109 VAL n 1 110 ALA n 1 111 LYS n 1 112 LEU n 1 113 GLY n 1 114 ALA n 1 115 LYS n 1 116 VAL n 1 117 SER n 1 118 LYS n 1 119 ALA n 1 120 LYS n 1 121 LYS n 1 122 ARG n 1 123 GLU n 1 124 ALA n 1 125 LEU n 1 126 ILE n 1 127 ALA n 1 128 CYS n 1 129 ILE n 1 130 GLU n 1 131 PRO n 1 132 ASP n 1 133 ARG n 1 134 ARG n 1 135 VAL n 1 136 ASP n 1 137 VAL n 1 138 LYS n 1 139 ILE n 1 140 ARG n 1 141 SER n 1 142 ILE n 1 143 VAL n 1 144 THR n 1 145 ARG n 1 146 GLN n 1 147 VAL n 1 148 VAL n 1 149 PRO n 1 150 ALA n 1 151 HIS n 1 152 ASN n 1 153 HIS n 1 154 HIS n 1 155 GLN n 1 156 HIS n 1 157 LEU n 1 158 GLU n 1 159 HIS n 1 160 HIS n 1 161 HIS n 1 162 HIS n 1 163 HIS n 1 164 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Neisseria _entity_src_gen.pdbx_gene_src_gene RMPM _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Neisseria meningitidis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 487 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Origami(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-20b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OMP4_NEIMA _struct_ref.pdbx_db_accession P38367 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLV SNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHHQH ; _struct_ref.pdbx_align_begin 87 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1R1M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38367 _struct_ref_seq.db_align_beg 87 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 242 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 65 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1R1M LEU A 157 ? UNP P38367 ? ? 'CLONING ARTIFACT' 221 1 1 1R1M GLU A 158 ? UNP P38367 ? ? 'CLONING ARTIFACT' 222 2 1 1R1M HIS A 159 ? UNP P38367 ? ? 'EXPRESSION TAG' 223 3 1 1R1M HIS A 160 ? UNP P38367 ? ? 'EXPRESSION TAG' 224 4 1 1R1M HIS A 161 ? UNP P38367 ? ? 'EXPRESSION TAG' 225 5 1 1R1M HIS A 162 ? UNP P38367 ? ? 'EXPRESSION TAG' 226 6 1 1R1M HIS A 163 ? UNP P38367 ? ? 'EXPRESSION TAG' 227 7 1 1R1M HIS A 164 ? UNP P38367 ? ? 'EXPRESSION TAG' 228 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1R1M _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.64 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details 'PEG 1000, Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2002-11-12 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1R1M _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50 _reflns.number_all 13605 _reflns.number_obs 13591 _reflns.percent_possible_obs 96.2 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rsym_value 0.053 _reflns.pdbx_netI_over_sigmaI 25 _reflns.B_iso_Wilson_estimate 20.2 _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs 0.254 _reflns_shell.pdbx_Rsym_value 0.254 _reflns_shell.meanI_over_sigI_obs 6 _reflns_shell.pdbx_redundancy 4.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1361 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R1M _refine.ls_d_res_high 1.9 _refine.ls_d_res_low 20 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 13591 _refine.ls_number_reflns_obs 13591 _refine.ls_number_reflns_R_free 684 _refine.ls_percent_reflns_obs 96.3 _refine.ls_R_factor_all 0.213 _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.233 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean 25.3 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1R1M _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 0.09 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.13 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1076 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 114 _refine_hist.number_atoms_total 1198 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.69 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.9 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 98.8 _refine_ls_shell.R_factor_R_free 0.268 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 120 _refine_ls_shell.number_reflns_obs 2257 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1R1M _struct.title 'Structure of the OmpA-like domain of RmpM from Neisseria meningitidis' _struct.pdbx_descriptor 'Outer membrane protein class 4, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R1M _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 15 ? GLY A 20 ? ALA A 79 GLY A 84 1 ? 6 HELX_P HELX_P2 2 ARG A 27 ? SER A 42 ? ARG A 91 SER A 106 1 ? 16 HELX_P HELX_P3 3 SER A 60 ? ASN A 82 ? SER A 124 ASN A 146 1 ? 23 HELX_P HELX_P4 4 PRO A 85 ? SER A 87 ? PRO A 149 SER A 151 5 ? 3 HELX_P HELX_P5 5 MET A 101 ? LYS A 111 ? MET A 165 LYS A 175 1 ? 11 HELX_P HELX_P6 6 ALA A 119 ? ILE A 129 ? ALA A 183 ILE A 193 1 ? 11 HELX_P HELX_P7 7 GLU A 130 ? ASP A 132 ? GLU A 194 ASP A 196 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 105 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 128 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 169 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 192 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.035 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 6 ? SER A 14 ? TYR A 70 SER A 78 A 2 ARG A 134 ? ILE A 142 ? ARG A 198 ILE A 206 A 3 ILE A 46 ? HIS A 54 ? ILE A 110 HIS A 118 A 4 ILE A 89 ? GLY A 93 ? ILE A 153 GLY A 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 9 ? N GLU A 73 O ILE A 139 ? O ILE A 203 A 2 3 O ASP A 136 ? O ASP A 200 N GLU A 52 ? N GLU A 116 A 3 4 N VAL A 51 ? N VAL A 115 O SER A 90 ? O SER A 154 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE TRS A 229' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TYR A 73 ? TYR A 137 . ? 1_555 ? 2 AC1 4 ASN A 77 ? ASN A 141 . ? 1_555 ? 3 AC1 4 HOH C . ? HOH A 340 . ? 1_555 ? 4 AC1 4 HOH C . ? HOH A 341 . ? 1_555 ? # _database_PDB_matrix.entry_id 1R1M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1R1M _atom_sites.fract_transf_matrix[1][1] 0.015748 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015748 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011925 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 65 ? ? ? A . n A 1 2 GLN 2 66 ? ? ? A . n A 1 3 ALA 3 67 ? ? ? A . n A 1 4 PRO 4 68 68 PRO PRO A . n A 1 5 GLN 5 69 69 GLN GLN A . n A 1 6 TYR 6 70 70 TYR TYR A . n A 1 7 VAL 7 71 71 VAL VAL A . n A 1 8 ASP 8 72 72 ASP ASP A . n A 1 9 GLU 9 73 73 GLU GLU A . n A 1 10 THR 10 74 74 THR THR A . n A 1 11 ILE 11 75 75 ILE ILE A . n A 1 12 SER 12 76 76 SER SER A . n A 1 13 LEU 13 77 77 LEU LEU A . n A 1 14 SER 14 78 78 SER SER A . n A 1 15 ALA 15 79 79 ALA ALA A . n A 1 16 LYS 16 80 80 LYS LYS A . n A 1 17 THR 17 81 81 THR THR A . n A 1 18 LEU 18 82 82 LEU LEU A . n A 1 19 PHE 19 83 83 PHE PHE A . n A 1 20 GLY 20 84 84 GLY GLY A . n A 1 21 PHE 21 85 85 PHE PHE A . n A 1 22 ASP 22 86 86 ASP ASP A . n A 1 23 LYS 23 87 87 LYS LYS A . n A 1 24 ASP 24 88 88 ASP ASP A . n A 1 25 SER 25 89 89 SER SER A . n A 1 26 LEU 26 90 90 LEU LEU A . n A 1 27 ARG 27 91 91 ARG ARG A . n A 1 28 ALA 28 92 92 ALA ALA A . n A 1 29 GLU 29 93 93 GLU GLU A . n A 1 30 ALA 30 94 94 ALA ALA A . n A 1 31 GLN 31 95 95 GLN GLN A . n A 1 32 ASP 32 96 96 ASP ASP A . n A 1 33 ASN 33 97 97 ASN ASN A . n A 1 34 LEU 34 98 98 LEU LEU A . n A 1 35 LYS 35 99 99 LYS LYS A . n A 1 36 VAL 36 100 100 VAL VAL A . n A 1 37 LEU 37 101 101 LEU LEU A . n A 1 38 ALA 38 102 102 ALA ALA A . n A 1 39 GLN 39 103 103 GLN GLN A . n A 1 40 ARG 40 104 104 ARG ARG A . n A 1 41 LEU 41 105 105 LEU LEU A . n A 1 42 SER 42 106 106 SER SER A . n A 1 43 ARG 43 107 107 ARG ARG A . n A 1 44 THR 44 108 108 THR THR A . n A 1 45 ASN 45 109 109 ASN ASN A . n A 1 46 ILE 46 110 110 ILE ILE A . n A 1 47 GLN 47 111 111 GLN GLN A . n A 1 48 SER 48 112 112 SER SER A . n A 1 49 VAL 49 113 113 VAL VAL A . n A 1 50 ARG 50 114 114 ARG ARG A . n A 1 51 VAL 51 115 115 VAL VAL A . n A 1 52 GLU 52 116 116 GLU GLU A . n A 1 53 GLY 53 117 117 GLY GLY A . n A 1 54 HIS 54 118 118 HIS HIS A . n A 1 55 THR 55 119 119 THR THR A . n A 1 56 ASP 56 120 120 ASP ASP A . n A 1 57 PHE 57 121 121 PHE PHE A . n A 1 58 MET 58 122 122 MET MET A . n A 1 59 GLY 59 123 123 GLY GLY A . n A 1 60 SER 60 124 124 SER SER A . n A 1 61 ASP 61 125 125 ASP ASP A . n A 1 62 LYS 62 126 126 LYS LYS A . n A 1 63 TYR 63 127 127 TYR TYR A . n A 1 64 ASN 64 128 128 ASN ASN A . n A 1 65 GLN 65 129 129 GLN GLN A . n A 1 66 ALA 66 130 130 ALA ALA A . n A 1 67 LEU 67 131 131 LEU LEU A . n A 1 68 SER 68 132 132 SER SER A . n A 1 69 GLU 69 133 133 GLU GLU A . n A 1 70 ARG 70 134 134 ARG ARG A . n A 1 71 ARG 71 135 135 ARG ARG A . n A 1 72 ALA 72 136 136 ALA ALA A . n A 1 73 TYR 73 137 137 TYR TYR A . n A 1 74 VAL 74 138 138 VAL VAL A . n A 1 75 VAL 75 139 139 VAL VAL A . n A 1 76 ALA 76 140 140 ALA ALA A . n A 1 77 ASN 77 141 141 ASN ASN A . n A 1 78 ASN 78 142 142 ASN ASN A . n A 1 79 LEU 79 143 143 LEU LEU A . n A 1 80 VAL 80 144 144 VAL VAL A . n A 1 81 SER 81 145 145 SER SER A . n A 1 82 ASN 82 146 146 ASN ASN A . n A 1 83 GLY 83 147 147 GLY GLY A . n A 1 84 VAL 84 148 148 VAL VAL A . n A 1 85 PRO 85 149 149 PRO PRO A . n A 1 86 VAL 86 150 150 VAL VAL A . n A 1 87 SER 87 151 151 SER SER A . n A 1 88 ARG 88 152 152 ARG ARG A . n A 1 89 ILE 89 153 153 ILE ILE A . n A 1 90 SER 90 154 154 SER SER A . n A 1 91 ALA 91 155 155 ALA ALA A . n A 1 92 VAL 92 156 156 VAL VAL A . n A 1 93 GLY 93 157 157 GLY GLY A . n A 1 94 LEU 94 158 158 LEU LEU A . n A 1 95 GLY 95 159 159 GLY GLY A . n A 1 96 GLU 96 160 160 GLU GLU A . n A 1 97 SER 97 161 161 SER SER A . n A 1 98 GLN 98 162 162 GLN GLN A . n A 1 99 ALA 99 163 163 ALA ALA A . n A 1 100 GLN 100 164 164 GLN GLN A . n A 1 101 MET 101 165 165 MET MET A . n A 1 102 THR 102 166 166 THR THR A . n A 1 103 GLN 103 167 167 GLN GLN A . n A 1 104 VAL 104 168 168 VAL VAL A . n A 1 105 CYS 105 169 169 CYS CYS A . n A 1 106 GLU 106 170 170 GLU GLU A . n A 1 107 ALA 107 171 171 ALA ALA A . n A 1 108 GLU 108 172 172 GLU GLU A . n A 1 109 VAL 109 173 173 VAL VAL A . n A 1 110 ALA 110 174 174 ALA ALA A . n A 1 111 LYS 111 175 175 LYS LYS A . n A 1 112 LEU 112 176 176 LEU LEU A . n A 1 113 GLY 113 177 177 GLY GLY A . n A 1 114 ALA 114 178 178 ALA ALA A . n A 1 115 LYS 115 179 179 LYS LYS A . n A 1 116 VAL 116 180 180 VAL VAL A . n A 1 117 SER 117 181 181 SER SER A . n A 1 118 LYS 118 182 182 LYS LYS A . n A 1 119 ALA 119 183 183 ALA ALA A . n A 1 120 LYS 120 184 184 LYS LYS A . n A 1 121 LYS 121 185 185 LYS LYS A . n A 1 122 ARG 122 186 186 ARG ARG A . n A 1 123 GLU 123 187 187 GLU GLU A . n A 1 124 ALA 124 188 188 ALA ALA A . n A 1 125 LEU 125 189 189 LEU LEU A . n A 1 126 ILE 126 190 190 ILE ILE A . n A 1 127 ALA 127 191 191 ALA ALA A . n A 1 128 CYS 128 192 192 CYS CYS A . n A 1 129 ILE 129 193 193 ILE ILE A . n A 1 130 GLU 130 194 194 GLU GLU A . n A 1 131 PRO 131 195 195 PRO PRO A . n A 1 132 ASP 132 196 196 ASP ASP A . n A 1 133 ARG 133 197 197 ARG ARG A . n A 1 134 ARG 134 198 198 ARG ARG A . n A 1 135 VAL 135 199 199 VAL VAL A . n A 1 136 ASP 136 200 200 ASP ASP A . n A 1 137 VAL 137 201 201 VAL VAL A . n A 1 138 LYS 138 202 202 LYS LYS A . n A 1 139 ILE 139 203 203 ILE ILE A . n A 1 140 ARG 140 204 204 ARG ARG A . n A 1 141 SER 141 205 205 SER SER A . n A 1 142 ILE 142 206 206 ILE ILE A . n A 1 143 VAL 143 207 207 VAL VAL A . n A 1 144 THR 144 208 ? ? ? A . n A 1 145 ARG 145 209 ? ? ? A . n A 1 146 GLN 146 210 ? ? ? A . n A 1 147 VAL 147 211 ? ? ? A . n A 1 148 VAL 148 212 ? ? ? A . n A 1 149 PRO 149 213 ? ? ? A . n A 1 150 ALA 150 214 ? ? ? A . n A 1 151 HIS 151 215 ? ? ? A . n A 1 152 ASN 152 216 ? ? ? A . n A 1 153 HIS 153 217 ? ? ? A . n A 1 154 HIS 154 218 ? ? ? A . n A 1 155 GLN 155 219 ? ? ? A . n A 1 156 HIS 156 220 ? ? ? A . n A 1 157 LEU 157 221 ? ? ? A . n A 1 158 GLU 158 222 ? ? ? A . n A 1 159 HIS 159 223 ? ? ? A . n A 1 160 HIS 160 224 ? ? ? A . n A 1 161 HIS 161 225 ? ? ? A . n A 1 162 HIS 162 226 ? ? ? A . n A 1 163 HIS 163 227 ? ? ? A . n A 1 164 HIS 164 228 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 307 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-11 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 CNS refinement 1.1 ? 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O3 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 TRS _pdbx_validate_symm_contact.auth_seq_id_1 229 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O3 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 TRS _pdbx_validate_symm_contact.auth_seq_id_2 229 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_665 _pdbx_validate_symm_contact.dist 2.07 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 88 ? ? -146.02 19.45 2 1 MET A 122 ? ? -71.28 48.97 3 1 LEU A 176 ? ? -155.97 82.33 4 1 LYS A 179 ? ? 52.27 19.86 5 1 VAL A 180 ? ? -61.99 69.48 6 1 SER A 181 ? ? 53.29 -18.92 7 1 LYS A 182 ? ? 54.15 -25.29 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 107 ? CD ? A ARG 43 CD 2 1 Y 0 A ARG 107 ? NE ? A ARG 43 NE 3 1 Y 0 A ARG 107 ? CZ ? A ARG 43 CZ 4 1 Y 0 A ARG 107 ? NH1 ? A ARG 43 NH1 5 1 Y 0 A ARG 107 ? NH2 ? A ARG 43 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 65 ? A GLU 1 2 1 Y 1 A GLN 66 ? A GLN 2 3 1 Y 1 A ALA 67 ? A ALA 3 4 1 Y 1 A THR 208 ? A THR 144 5 1 Y 1 A ARG 209 ? A ARG 145 6 1 Y 1 A GLN 210 ? A GLN 146 7 1 Y 1 A VAL 211 ? A VAL 147 8 1 Y 1 A VAL 212 ? A VAL 148 9 1 Y 1 A PRO 213 ? A PRO 149 10 1 Y 1 A ALA 214 ? A ALA 150 11 1 Y 1 A HIS 215 ? A HIS 151 12 1 Y 1 A ASN 216 ? A ASN 152 13 1 Y 1 A HIS 217 ? A HIS 153 14 1 Y 1 A HIS 218 ? A HIS 154 15 1 Y 1 A GLN 219 ? A GLN 155 16 1 Y 1 A HIS 220 ? A HIS 156 17 1 Y 1 A LEU 221 ? A LEU 157 18 1 Y 1 A GLU 222 ? A GLU 158 19 1 Y 1 A HIS 223 ? A HIS 159 20 1 Y 1 A HIS 224 ? A HIS 160 21 1 Y 1 A HIS 225 ? A HIS 161 22 1 Y 1 A HIS 226 ? A HIS 162 23 1 Y 1 A HIS 227 ? A HIS 163 24 1 Y 1 A HIS 228 ? A HIS 164 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS 1 229 201 TRS TRS A . C 3 HOH 1 230 1 HOH WAT A . C 3 HOH 2 231 2 HOH WAT A . C 3 HOH 3 232 3 HOH WAT A . C 3 HOH 4 233 4 HOH WAT A . C 3 HOH 5 234 5 HOH WAT A . C 3 HOH 6 235 6 HOH WAT A . C 3 HOH 7 236 7 HOH WAT A . C 3 HOH 8 237 8 HOH WAT A . C 3 HOH 9 238 9 HOH WAT A . C 3 HOH 10 239 10 HOH WAT A . C 3 HOH 11 240 11 HOH WAT A . C 3 HOH 12 241 12 HOH WAT A . C 3 HOH 13 242 13 HOH WAT A . C 3 HOH 14 243 14 HOH WAT A . C 3 HOH 15 244 15 HOH WAT A . C 3 HOH 16 245 16 HOH WAT A . C 3 HOH 17 246 17 HOH WAT A . C 3 HOH 18 247 18 HOH WAT A . C 3 HOH 19 248 19 HOH WAT A . C 3 HOH 20 249 20 HOH WAT A . C 3 HOH 21 250 21 HOH WAT A . C 3 HOH 22 251 22 HOH WAT A . C 3 HOH 23 252 23 HOH WAT A . C 3 HOH 24 253 24 HOH WAT A . C 3 HOH 25 254 25 HOH WAT A . C 3 HOH 26 255 26 HOH WAT A . C 3 HOH 27 256 27 HOH WAT A . C 3 HOH 28 257 28 HOH WAT A . C 3 HOH 29 258 29 HOH WAT A . C 3 HOH 30 259 30 HOH WAT A . C 3 HOH 31 260 31 HOH WAT A . C 3 HOH 32 261 32 HOH WAT A . C 3 HOH 33 262 33 HOH WAT A . C 3 HOH 34 263 34 HOH WAT A . C 3 HOH 35 264 35 HOH WAT A . C 3 HOH 36 265 36 HOH WAT A . C 3 HOH 37 266 37 HOH WAT A . C 3 HOH 38 267 38 HOH WAT A . C 3 HOH 39 268 39 HOH WAT A . C 3 HOH 40 269 40 HOH WAT A . C 3 HOH 41 270 41 HOH WAT A . C 3 HOH 42 271 42 HOH WAT A . C 3 HOH 43 272 43 HOH WAT A . C 3 HOH 44 273 44 HOH WAT A . C 3 HOH 45 274 45 HOH WAT A . C 3 HOH 46 275 46 HOH WAT A . C 3 HOH 47 276 47 HOH WAT A . C 3 HOH 48 277 48 HOH WAT A . C 3 HOH 49 278 49 HOH WAT A . C 3 HOH 50 279 50 HOH WAT A . C 3 HOH 51 280 51 HOH WAT A . C 3 HOH 52 281 52 HOH WAT A . C 3 HOH 53 282 53 HOH WAT A . C 3 HOH 54 283 54 HOH WAT A . C 3 HOH 55 284 55 HOH WAT A . C 3 HOH 56 285 56 HOH WAT A . C 3 HOH 57 286 57 HOH WAT A . C 3 HOH 58 287 58 HOH WAT A . C 3 HOH 59 288 59 HOH WAT A . C 3 HOH 60 289 60 HOH WAT A . C 3 HOH 61 290 61 HOH WAT A . C 3 HOH 62 291 62 HOH WAT A . C 3 HOH 63 292 63 HOH WAT A . C 3 HOH 64 293 64 HOH WAT A . C 3 HOH 65 294 65 HOH WAT A . C 3 HOH 66 295 66 HOH WAT A . C 3 HOH 67 296 67 HOH WAT A . C 3 HOH 68 297 68 HOH WAT A . C 3 HOH 69 298 69 HOH WAT A . C 3 HOH 70 299 70 HOH WAT A . C 3 HOH 71 300 71 HOH WAT A . C 3 HOH 72 301 72 HOH WAT A . C 3 HOH 73 302 73 HOH WAT A . C 3 HOH 74 303 74 HOH WAT A . C 3 HOH 75 304 75 HOH WAT A . C 3 HOH 76 305 76 HOH WAT A . C 3 HOH 77 306 77 HOH WAT A . C 3 HOH 78 307 78 HOH WAT A . C 3 HOH 79 308 79 HOH WAT A . C 3 HOH 80 309 80 HOH WAT A . C 3 HOH 81 310 81 HOH WAT A . C 3 HOH 82 311 82 HOH WAT A . C 3 HOH 83 312 83 HOH WAT A . C 3 HOH 84 313 84 HOH WAT A . C 3 HOH 85 314 85 HOH WAT A . C 3 HOH 86 315 86 HOH WAT A . C 3 HOH 87 316 87 HOH WAT A . C 3 HOH 88 317 88 HOH WAT A . C 3 HOH 89 318 89 HOH WAT A . C 3 HOH 90 319 90 HOH WAT A . C 3 HOH 91 320 91 HOH WAT A . C 3 HOH 92 321 92 HOH WAT A . C 3 HOH 93 322 93 HOH WAT A . C 3 HOH 94 323 94 HOH WAT A . C 3 HOH 95 324 95 HOH WAT A . C 3 HOH 96 325 96 HOH WAT A . C 3 HOH 97 326 97 HOH WAT A . C 3 HOH 98 327 98 HOH WAT A . C 3 HOH 99 328 99 HOH WAT A . C 3 HOH 100 329 100 HOH WAT A . C 3 HOH 101 330 101 HOH WAT A . C 3 HOH 102 331 102 HOH WAT A . C 3 HOH 103 332 103 HOH WAT A . C 3 HOH 104 333 104 HOH WAT A . C 3 HOH 105 334 105 HOH WAT A . C 3 HOH 106 335 106 HOH WAT A . C 3 HOH 107 336 107 HOH WAT A . C 3 HOH 108 337 108 HOH WAT A . C 3 HOH 109 338 109 HOH WAT A . C 3 HOH 110 339 110 HOH WAT A . C 3 HOH 111 340 111 HOH WAT A . C 3 HOH 112 341 112 HOH WAT A . C 3 HOH 113 342 113 HOH WAT A . C 3 HOH 114 343 114 HOH WAT A . #