data_1R2Q # _entry.id 1R2Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1R2Q pdb_00001r2q 10.2210/pdb1r2q/pdb RCSB RCSB020363 ? ? WWPDB D_1000020363 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1N6H . unspecified PDB 1N6I . unspecified PDB 1N6K . unspecified PDB 1N6L . unspecified PDB 1N6N . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R2Q _pdbx_database_status.recvd_initial_deposition_date 2003-09-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Terzyan, S.' 1 'Zhu, G.' 2 'Li, G.' 3 'Zhang, X.C.' 4 # _citation.id primary _citation.title 'Refinement of the structure of human Rab5a GTPase domain at 1.05 A resolution.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 60 _citation.page_first 54 _citation.page_last 60 _citation.year 2004 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14684892 _citation.pdbx_database_id_DOI 10.1107/S0907444903021632 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terzyan, S.' 1 ? primary 'Zhu, G.' 2 ? primary 'Li, G.' 3 ? primary 'Zhang, X.C.' 4 ? # _cell.entry_id 1R2Q _cell.length_a 35.727 _cell.length_b 64.573 _cell.length_c 66.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R2Q _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-5A' 18987.572 1 ? ? 'GTPase domain' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 6 ? ? ? ? 5 water nat water 18.015 213 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQ AAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF MAIAKKLPKN ; _entity_poly.pdbx_seq_one_letter_code_can ;GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQ AAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF MAIAKKLPKN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 LYS n 1 4 ILE n 1 5 CYS n 1 6 GLN n 1 7 PHE n 1 8 LYS n 1 9 LEU n 1 10 VAL n 1 11 LEU n 1 12 LEU n 1 13 GLY n 1 14 GLU n 1 15 SER n 1 16 ALA n 1 17 VAL n 1 18 GLY n 1 19 LYS n 1 20 SER n 1 21 SER n 1 22 LEU n 1 23 VAL n 1 24 LEU n 1 25 ARG n 1 26 PHE n 1 27 VAL n 1 28 LYS n 1 29 GLY n 1 30 GLN n 1 31 PHE n 1 32 HIS n 1 33 GLU n 1 34 PHE n 1 35 GLN n 1 36 GLU n 1 37 SER n 1 38 THR n 1 39 ILE n 1 40 GLY n 1 41 ALA n 1 42 ALA n 1 43 PHE n 1 44 LEU n 1 45 THR n 1 46 GLN n 1 47 THR n 1 48 VAL n 1 49 CYS n 1 50 LEU n 1 51 ASP n 1 52 ASP n 1 53 THR n 1 54 THR n 1 55 VAL n 1 56 LYS n 1 57 PHE n 1 58 GLU n 1 59 ILE n 1 60 TRP n 1 61 ASP n 1 62 THR n 1 63 ALA n 1 64 GLY n 1 65 GLN n 1 66 GLU n 1 67 ARG n 1 68 TYR n 1 69 HIS n 1 70 SER n 1 71 LEU n 1 72 ALA n 1 73 PRO n 1 74 MET n 1 75 TYR n 1 76 TYR n 1 77 ARG n 1 78 GLY n 1 79 ALA n 1 80 GLN n 1 81 ALA n 1 82 ALA n 1 83 ILE n 1 84 VAL n 1 85 VAL n 1 86 TYR n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ASN n 1 91 GLU n 1 92 GLU n 1 93 SER n 1 94 PHE n 1 95 ALA n 1 96 ARG n 1 97 ALA n 1 98 LYS n 1 99 ASN n 1 100 TRP n 1 101 VAL n 1 102 LYS n 1 103 GLU n 1 104 LEU n 1 105 GLN n 1 106 ARG n 1 107 GLN n 1 108 ALA n 1 109 SER n 1 110 PRO n 1 111 ASN n 1 112 ILE n 1 113 VAL n 1 114 ILE n 1 115 ALA n 1 116 LEU n 1 117 SER n 1 118 GLY n 1 119 ASN n 1 120 LYS n 1 121 ALA n 1 122 ASP n 1 123 LEU n 1 124 ALA n 1 125 ASN n 1 126 LYS n 1 127 ARG n 1 128 ALA n 1 129 VAL n 1 130 ASP n 1 131 PHE n 1 132 GLN n 1 133 GLU n 1 134 ALA n 1 135 GLN n 1 136 SER n 1 137 TYR n 1 138 ALA n 1 139 ASP n 1 140 ASP n 1 141 ASN n 1 142 SER n 1 143 LEU n 1 144 LEU n 1 145 PHE n 1 146 MET n 1 147 GLU n 1 148 THR n 1 149 SER n 1 150 ALA n 1 151 LYS n 1 152 THR n 1 153 SER n 1 154 MET n 1 155 ASN n 1 156 VAL n 1 157 ASN n 1 158 GLU n 1 159 ILE n 1 160 PHE n 1 161 MET n 1 162 ALA n 1 163 ILE n 1 164 ALA n 1 165 LYS n 1 166 LYS n 1 167 LEU n 1 168 PRO n 1 169 LYS n 1 170 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RAB5A OR RAB5' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'bl21(de3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB5A_HUMAN _struct_ref.pdbx_db_accession P20339 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQ AAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF MAIAKKLPKN ; _struct_ref.pdbx_align_begin 15 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1R2Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P20339 _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 184 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 15 _struct_ref_seq.pdbx_auth_seq_align_end 184 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1R2Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.73 _exptl_crystal.density_percent_sol 29.1 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'PEG 6000, SODIUM CHLORIDE, MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-07-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.916 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.916 # _reflns.entry_id 1R2Q _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.05 _reflns.d_resolution_low 29.02 _reflns.number_all 68904 _reflns.number_obs 68904 _reflns.percent_possible_obs 95.2 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.B_iso_Wilson_estimate 10.2 _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.05 _reflns_shell.d_res_low 1.07 _reflns_shell.percent_possible_all 79.0 _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3050 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1R2Q _refine.ls_d_res_high 1.05 _refine.ls_d_res_low 29.02 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 68700 _refine.ls_number_restraints 19888 _refine.ls_number_parameters 15339 _refine.ls_number_reflns_obs 68700 _refine.ls_number_reflns_R_free 2063 _refine.ls_percent_reflns_obs 95 _refine.ls_R_factor_all 0.125 _refine.ls_R_factor_obs 0.124 _refine.ls_R_factor_R_work 0.1239 _refine.ls_R_factor_R_free 0.1688 _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model 'PDB ENTRY 1N6N' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_isotropic_thermal_model anisotropic _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details 'Refinement was carried against F2' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL., 91, 201-228 (1973).' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1R2Q _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.number_disordered_residues 55 _refine_analyze.occupancy_sum_non_hydrogen 1593.9 _refine_analyze.occupancy_sum_hydrogen 1293 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1335 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 69 _refine_hist.number_atoms_solvent 213 _refine_hist.number_atoms_total 1617 _refine_hist.d_res_high 1.05 _refine_hist.d_res_low 29.02 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 0.036 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0288 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.098 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.082 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.068 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.065 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.109 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1R2Q _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.number_reflns_obs_no_cutoff 58461 _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 3 _pdbx_refine.R_factor_all_4sig_cutoff 0.118 _pdbx_refine.R_factor_obs_4sig_cutoff 0.117 _pdbx_refine.number_reflns_obs_4sig_cutoff 58461 _pdbx_refine.free_R_factor_4sig_cutoff 0.159 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1740 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 3 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1R2Q _struct.title 'Crystal Structure of Human Rab5a GTPase Domain at 1.05 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R2Q _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'RAB, GTPase, GNP, atomic resolution, Protein transport' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 18 ? GLY A 29 ? GLY A 32 GLY A 43 1 ? 12 HELX_P HELX_P2 2 GLN A 65 ? SER A 70 ? GLN A 79 SER A 84 5 ? 6 HELX_P HELX_P3 3 LEU A 71 ? ARG A 77 ? LEU A 85 ARG A 91 1 ? 7 HELX_P HELX_P4 4 ASN A 90 ? ALA A 108 ? ASN A 104 ALA A 122 1 ? 19 HELX_P HELX_P5 5 LYS A 120 ? ARG A 127 ? LYS A 134 ARG A 141 5 ? 8 HELX_P HELX_P6 6 ASP A 130 ? ASN A 141 ? ASP A 144 ASN A 155 1 ? 12 HELX_P HELX_P7 7 ASN A 155 ? LYS A 166 ? ASN A 169 LYS A 180 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 20 OG ? ? ? 1_555 B MG . MG ? ? A SER 34 A MG 300 1_555 ? ? ? ? ? ? ? 2.066 ? ? metalc2 metalc ? ? A THR 38 OG1 ? ? ? 1_555 B MG . MG ? ? A THR 52 A MG 300 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc3 metalc ? ? C GNP . O2G ? ? ? 1_555 B MG . MG ? ? A GNP 200 A MG 300 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc4 metalc ? ? C GNP . O2B ? ? ? 1_555 B MG . MG ? ? A GNP 200 A MG 300 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 300 A HOH 1400 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 300 A HOH 1401 1_555 ? ? ? ? ? ? ? 2.081 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 41 ? LEU A 50 ? ALA A 55 LEU A 64 A 2 THR A 53 ? THR A 62 ? THR A 67 THR A 76 A 3 LYS A 3 ? LEU A 12 ? LYS A 17 LEU A 26 A 4 ALA A 81 ? ASP A 87 ? ALA A 95 ASP A 101 A 5 VAL A 113 ? ASN A 119 ? VAL A 127 ASN A 133 A 6 LEU A 144 ? GLU A 147 ? LEU A 158 GLU A 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 46 ? N GLN A 60 O PHE A 57 ? O PHE A 71 A 2 3 O LYS A 56 ? O LYS A 70 N CYS A 5 ? N CYS A 19 A 3 4 N LEU A 12 ? N LEU A 26 O VAL A 85 ? O VAL A 99 A 4 5 N VAL A 84 ? N VAL A 98 O ALA A 115 ? O ALA A 129 A 5 6 N LEU A 116 ? N LEU A 130 O LEU A 144 ? O LEU A 158 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 300 ? 5 'BINDING SITE FOR RESIDUE MG A 300' AC2 Software A GNP 200 ? 31 'BINDING SITE FOR RESIDUE GNP A 200' AC3 Software A GOL 400 ? 7 'BINDING SITE FOR RESIDUE GOL A 400' AC4 Software A GOL 401 ? 6 'BINDING SITE FOR RESIDUE GOL A 401' AC5 Software A GOL 402 ? 11 'BINDING SITE FOR RESIDUE GOL A 402' AC6 Software A GOL 403 ? 7 'BINDING SITE FOR RESIDUE GOL A 403' AC7 Software A GOL 404 ? 6 'BINDING SITE FOR RESIDUE GOL A 404' AC8 Software A GOL 405 ? 5 'BINDING SITE FOR RESIDUE GOL A 405' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 20 ? SER A 34 . ? 1_555 ? 2 AC1 5 THR A 38 ? THR A 52 . ? 1_555 ? 3 AC1 5 GNP C . ? GNP A 200 . ? 1_555 ? 4 AC1 5 HOH J . ? HOH A 1400 . ? 1_555 ? 5 AC1 5 HOH J . ? HOH A 1401 . ? 1_555 ? 6 AC2 31 SER A 15 ? SER A 29 . ? 1_555 ? 7 AC2 31 ALA A 16 ? ALA A 30 . ? 1_555 ? 8 AC2 31 VAL A 17 ? VAL A 31 . ? 1_555 ? 9 AC2 31 GLY A 18 ? GLY A 32 . ? 1_555 ? 10 AC2 31 LYS A 19 ? LYS A 33 . ? 1_555 ? 11 AC2 31 SER A 20 ? SER A 34 . ? 1_555 ? 12 AC2 31 SER A 21 ? SER A 35 . ? 1_555 ? 13 AC2 31 PHE A 31 ? PHE A 45 . ? 1_555 ? 14 AC2 31 HIS A 32 ? HIS A 46 . ? 1_555 ? 15 AC2 31 GLU A 33 ? GLU A 47 . ? 1_555 ? 16 AC2 31 GLN A 35 ? GLN A 49 . ? 1_555 ? 17 AC2 31 SER A 37 ? SER A 51 . ? 1_555 ? 18 AC2 31 THR A 38 ? THR A 52 . ? 1_555 ? 19 AC2 31 GLY A 64 ? GLY A 78 . ? 1_555 ? 20 AC2 31 ASN A 119 ? ASN A 133 . ? 1_555 ? 21 AC2 31 LYS A 120 ? LYS A 134 . ? 1_555 ? 22 AC2 31 ASP A 122 ? ASP A 136 . ? 1_555 ? 23 AC2 31 LEU A 123 ? LEU A 137 . ? 1_555 ? 24 AC2 31 SER A 149 ? SER A 163 . ? 1_555 ? 25 AC2 31 ALA A 150 ? ALA A 164 . ? 1_555 ? 26 AC2 31 LYS A 151 ? LYS A 165 . ? 1_555 ? 27 AC2 31 LYS A 166 ? LYS A 180 . ? 2_555 ? 28 AC2 31 MG B . ? MG A 300 . ? 1_555 ? 29 AC2 31 GOL D . ? GOL A 400 . ? 1_555 ? 30 AC2 31 HOH J . ? HOH A 1400 . ? 1_555 ? 31 AC2 31 HOH J . ? HOH A 1401 . ? 1_555 ? 32 AC2 31 HOH J . ? HOH A 1419 . ? 1_555 ? 33 AC2 31 HOH J . ? HOH A 1425 . ? 1_555 ? 34 AC2 31 HOH J . ? HOH A 1430 . ? 1_555 ? 35 AC2 31 HOH J . ? HOH A 1446 . ? 1_555 ? 36 AC2 31 HOH J . ? HOH A 1507 . ? 1_555 ? 37 AC3 7 ALA A 16 ? ALA A 30 . ? 1_555 ? 38 AC3 7 GLN A 35 ? GLN A 49 . ? 1_555 ? 39 AC3 7 GNP C . ? GNP A 200 . ? 1_555 ? 40 AC3 7 HOH J . ? HOH A 1425 . ? 1_555 ? 41 AC3 7 HOH J . ? HOH A 1430 . ? 1_555 ? 42 AC3 7 HOH J . ? HOH A 1463 . ? 1_555 ? 43 AC3 7 HOH J . ? HOH A 1592 . ? 1_555 ? 44 AC4 6 THR A 89 ? THR A 103 . ? 1_555 ? 45 AC4 6 LYS A 102 ? LYS A 116 . ? 4_546 ? 46 AC4 6 LYS A 126 ? LYS A 140 . ? 1_555 ? 47 AC4 6 GOL H . ? GOL A 404 . ? 1_555 ? 48 AC4 6 HOH J . ? HOH A 1433 . ? 4_546 ? 49 AC4 6 HOH J . ? HOH A 1467 . ? 1_555 ? 50 AC5 11 GLU A 92 ? GLU A 106 . ? 1_555 ? 51 AC5 11 ALA A 95 ? ALA A 109 . ? 1_555 ? 52 AC5 11 ARG A 96 ? ARG A 110 . ? 1_555 ? 53 AC5 11 ASN A 99 ? ASN A 113 . ? 1_555 ? 54 AC5 11 ARG A 127 ? ARG A 141 . ? 4_446 ? 55 AC5 11 ALA A 128 ? ALA A 142 . ? 4_446 ? 56 AC5 11 VAL A 129 ? VAL A 143 . ? 4_446 ? 57 AC5 11 ASP A 130 ? ASP A 144 . ? 4_446 ? 58 AC5 11 HOH J . ? HOH A 1445 . ? 4_446 ? 59 AC5 11 HOH J . ? HOH A 1451 . ? 1_555 ? 60 AC5 11 HOH J . ? HOH A 1604 . ? 1_555 ? 61 AC6 7 ARG A 106 ? ARG A 120 . ? 1_555 ? 62 AC6 7 GLN A 107 ? GLN A 121 . ? 1_555 ? 63 AC6 7 GLU A 158 ? GLU A 172 . ? 1_455 ? 64 AC6 7 HOH J . ? HOH A 1415 . ? 1_455 ? 65 AC6 7 HOH J . ? HOH A 1512 . ? 1_455 ? 66 AC6 7 HOH J . ? HOH A 1569 . ? 1_455 ? 67 AC6 7 HOH J . ? HOH A 1578 . ? 1_555 ? 68 AC7 6 ASP A 87 ? ASP A 101 . ? 1_555 ? 69 AC7 6 THR A 89 ? THR A 103 . ? 1_555 ? 70 AC7 6 LYS A 120 ? LYS A 134 . ? 1_555 ? 71 AC7 6 LEU A 123 ? LEU A 137 . ? 1_555 ? 72 AC7 6 LYS A 126 ? LYS A 140 . ? 1_555 ? 73 AC7 6 GOL E . ? GOL A 401 . ? 1_555 ? 74 AC8 5 GLN A 105 ? GLN A 119 . ? 1_555 ? 75 AC8 5 ILE A 112 ? ILE A 126 . ? 1_555 ? 76 AC8 5 ILE A 114 ? ILE A 128 . ? 1_555 ? 77 AC8 5 ASN A 141 ? ASN A 155 . ? 1_555 ? 78 AC8 5 HOH J . ? HOH A 1517 . ? 1_555 ? # _database_PDB_matrix.entry_id 1R2Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1R2Q _atom_sites.fract_transf_matrix[1][1] 0.027990 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015486 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015110 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 15 15 GLY GLY A . n A 1 2 ASN 2 16 16 ASN ASN A . n A 1 3 LYS 3 17 17 LYS LYS A . n A 1 4 ILE 4 18 18 ILE ILE A . n A 1 5 CYS 5 19 19 CYS CYS A . n A 1 6 GLN 6 20 20 GLN GLN A . n A 1 7 PHE 7 21 21 PHE PHE A . n A 1 8 LYS 8 22 22 LYS LYS A . n A 1 9 LEU 9 23 23 LEU LEU A . n A 1 10 VAL 10 24 24 VAL VAL A . n A 1 11 LEU 11 25 25 LEU LEU A . n A 1 12 LEU 12 26 26 LEU LEU A . n A 1 13 GLY 13 27 27 GLY GLY A . n A 1 14 GLU 14 28 28 GLU GLU A . n A 1 15 SER 15 29 29 SER SER A . n A 1 16 ALA 16 30 30 ALA ALA A . n A 1 17 VAL 17 31 31 VAL VAL A . n A 1 18 GLY 18 32 32 GLY GLY A . n A 1 19 LYS 19 33 33 LYS LYS A . n A 1 20 SER 20 34 34 SER SER A . n A 1 21 SER 21 35 35 SER SER A . n A 1 22 LEU 22 36 36 LEU LEU A . n A 1 23 VAL 23 37 37 VAL VAL A . n A 1 24 LEU 24 38 38 LEU LEU A . n A 1 25 ARG 25 39 39 ARG ARG A . n A 1 26 PHE 26 40 40 PHE PHE A . n A 1 27 VAL 27 41 41 VAL VAL A . n A 1 28 LYS 28 42 42 LYS LYS A . n A 1 29 GLY 29 43 43 GLY GLY A . n A 1 30 GLN 30 44 44 GLN GLN A . n A 1 31 PHE 31 45 45 PHE PHE A . n A 1 32 HIS 32 46 46 HIS HIS A . n A 1 33 GLU 33 47 47 GLU GLU A . n A 1 34 PHE 34 48 48 PHE PHE A . n A 1 35 GLN 35 49 49 GLN GLN A . n A 1 36 GLU 36 50 50 GLU GLU A . n A 1 37 SER 37 51 51 SER SER A . n A 1 38 THR 38 52 52 THR THR A . n A 1 39 ILE 39 53 53 ILE ILE A . n A 1 40 GLY 40 54 54 GLY GLY A . n A 1 41 ALA 41 55 55 ALA ALA A . n A 1 42 ALA 42 56 56 ALA ALA A . n A 1 43 PHE 43 57 57 PHE PHE A . n A 1 44 LEU 44 58 58 LEU LEU A . n A 1 45 THR 45 59 59 THR THR A . n A 1 46 GLN 46 60 60 GLN GLN A . n A 1 47 THR 47 61 61 THR THR A . n A 1 48 VAL 48 62 62 VAL VAL A . n A 1 49 CYS 49 63 63 CYS CYS A . n A 1 50 LEU 50 64 64 LEU LEU A . n A 1 51 ASP 51 65 65 ASP ASP A . n A 1 52 ASP 52 66 66 ASP ASP A . n A 1 53 THR 53 67 67 THR THR A . n A 1 54 THR 54 68 68 THR THR A . n A 1 55 VAL 55 69 69 VAL VAL A . n A 1 56 LYS 56 70 70 LYS LYS A . n A 1 57 PHE 57 71 71 PHE PHE A . n A 1 58 GLU 58 72 72 GLU GLU A . n A 1 59 ILE 59 73 73 ILE ILE A . n A 1 60 TRP 60 74 74 TRP TRP A . n A 1 61 ASP 61 75 75 ASP ASP A . n A 1 62 THR 62 76 76 THR THR A . n A 1 63 ALA 63 77 77 ALA ALA A . n A 1 64 GLY 64 78 78 GLY GLY A . n A 1 65 GLN 65 79 79 GLN GLN A . n A 1 66 GLU 66 80 80 GLU GLU A . n A 1 67 ARG 67 81 81 ARG ARG A . n A 1 68 TYR 68 82 82 TYR TYR A . n A 1 69 HIS 69 83 83 HIS HIS A . n A 1 70 SER 70 84 84 SER SER A . n A 1 71 LEU 71 85 85 LEU LEU A . n A 1 72 ALA 72 86 86 ALA ALA A . n A 1 73 PRO 73 87 87 PRO PRO A . n A 1 74 MET 74 88 88 MET MET A . n A 1 75 TYR 75 89 89 TYR TYR A . n A 1 76 TYR 76 90 90 TYR TYR A . n A 1 77 ARG 77 91 91 ARG ARG A . n A 1 78 GLY 78 92 92 GLY GLY A . n A 1 79 ALA 79 93 93 ALA ALA A . n A 1 80 GLN 80 94 94 GLN GLN A . n A 1 81 ALA 81 95 95 ALA ALA A . n A 1 82 ALA 82 96 96 ALA ALA A . n A 1 83 ILE 83 97 97 ILE ILE A . n A 1 84 VAL 84 98 98 VAL VAL A . n A 1 85 VAL 85 99 99 VAL VAL A . n A 1 86 TYR 86 100 100 TYR TYR A . n A 1 87 ASP 87 101 101 ASP ASP A . n A 1 88 ILE 88 102 102 ILE ILE A . n A 1 89 THR 89 103 103 THR THR A . n A 1 90 ASN 90 104 104 ASN ASN A . n A 1 91 GLU 91 105 105 GLU GLU A . n A 1 92 GLU 92 106 106 GLU GLU A . n A 1 93 SER 93 107 107 SER SER A . n A 1 94 PHE 94 108 108 PHE PHE A . n A 1 95 ALA 95 109 109 ALA ALA A . n A 1 96 ARG 96 110 110 ARG ARG A . n A 1 97 ALA 97 111 111 ALA ALA A . n A 1 98 LYS 98 112 112 LYS LYS A . n A 1 99 ASN 99 113 113 ASN ASN A . n A 1 100 TRP 100 114 114 TRP TRP A . n A 1 101 VAL 101 115 115 VAL VAL A . n A 1 102 LYS 102 116 116 LYS LYS A . n A 1 103 GLU 103 117 117 GLU GLU A . n A 1 104 LEU 104 118 118 LEU LEU A . n A 1 105 GLN 105 119 119 GLN GLN A . n A 1 106 ARG 106 120 120 ARG ARG A . n A 1 107 GLN 107 121 121 GLN GLN A . n A 1 108 ALA 108 122 122 ALA ALA A . n A 1 109 SER 109 123 123 SER SER A . n A 1 110 PRO 110 124 124 PRO PRO A . n A 1 111 ASN 111 125 125 ASN ASN A . n A 1 112 ILE 112 126 126 ILE ILE A . n A 1 113 VAL 113 127 127 VAL VAL A . n A 1 114 ILE 114 128 128 ILE ILE A . n A 1 115 ALA 115 129 129 ALA ALA A . n A 1 116 LEU 116 130 130 LEU LEU A . n A 1 117 SER 117 131 131 SER SER A . n A 1 118 GLY 118 132 132 GLY GLY A . n A 1 119 ASN 119 133 133 ASN ASN A . n A 1 120 LYS 120 134 134 LYS LYS A . n A 1 121 ALA 121 135 135 ALA ALA A . n A 1 122 ASP 122 136 136 ASP ASP A . n A 1 123 LEU 123 137 137 LEU LEU A . n A 1 124 ALA 124 138 138 ALA ALA A . n A 1 125 ASN 125 139 139 ASN ASN A . n A 1 126 LYS 126 140 140 LYS LYS A . n A 1 127 ARG 127 141 141 ARG ARG A . n A 1 128 ALA 128 142 142 ALA ALA A . n A 1 129 VAL 129 143 143 VAL VAL A . n A 1 130 ASP 130 144 144 ASP ASP A . n A 1 131 PHE 131 145 145 PHE PHE A . n A 1 132 GLN 132 146 146 GLN GLN A . n A 1 133 GLU 133 147 147 GLU GLU A . n A 1 134 ALA 134 148 148 ALA ALA A . n A 1 135 GLN 135 149 149 GLN GLN A . n A 1 136 SER 136 150 150 SER SER A . n A 1 137 TYR 137 151 151 TYR TYR A . n A 1 138 ALA 138 152 152 ALA ALA A . n A 1 139 ASP 139 153 153 ASP ASP A . n A 1 140 ASP 140 154 154 ASP ASP A . n A 1 141 ASN 141 155 155 ASN ASN A . n A 1 142 SER 142 156 156 SER SER A . n A 1 143 LEU 143 157 157 LEU LEU A . n A 1 144 LEU 144 158 158 LEU LEU A . n A 1 145 PHE 145 159 159 PHE PHE A . n A 1 146 MET 146 160 160 MET MET A . n A 1 147 GLU 147 161 161 GLU GLU A . n A 1 148 THR 148 162 162 THR THR A . n A 1 149 SER 149 163 163 SER SER A . n A 1 150 ALA 150 164 164 ALA ALA A . n A 1 151 LYS 151 165 165 LYS LYS A . n A 1 152 THR 152 166 166 THR THR A . n A 1 153 SER 153 167 167 SER SER A . n A 1 154 MET 154 168 168 MET MET A . n A 1 155 ASN 155 169 169 ASN ASN A . n A 1 156 VAL 156 170 170 VAL VAL A . n A 1 157 ASN 157 171 171 ASN ASN A . n A 1 158 GLU 158 172 172 GLU GLU A . n A 1 159 ILE 159 173 173 ILE ILE A . n A 1 160 PHE 160 174 174 PHE PHE A . n A 1 161 MET 161 175 175 MET MET A . n A 1 162 ALA 162 176 176 ALA ALA A . n A 1 163 ILE 163 177 177 ILE ILE A . n A 1 164 ALA 164 178 178 ALA ALA A . n A 1 165 LYS 165 179 179 LYS LYS A . n A 1 166 LYS 166 180 180 LYS LYS A . n A 1 167 LEU 167 181 181 LEU LEU A . n A 1 168 PRO 168 182 182 PRO PRO A . n A 1 169 LYS 169 183 183 LYS LYS A . n A 1 170 ASN 170 184 184 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 300 300 MG MG A . C 3 GNP 1 200 200 GNP GNP A . D 4 GOL 1 400 400 GOL GOL A . E 4 GOL 1 401 401 GOL GOL A . F 4 GOL 1 402 402 GOL GOL A . G 4 GOL 1 403 403 GOL GOL A . H 4 GOL 1 404 404 GOL GOL A . I 4 GOL 1 405 405 GOL GOL A . J 5 HOH 1 1400 1400 HOH HOH A . J 5 HOH 2 1401 1401 HOH HOH A . J 5 HOH 3 1402 1402 HOH HOH A . J 5 HOH 4 1403 1403 HOH HOH A . J 5 HOH 5 1404 1404 HOH HOH A . J 5 HOH 6 1405 1405 HOH HOH A . J 5 HOH 7 1406 1406 HOH HOH A . J 5 HOH 8 1407 1407 HOH HOH A . J 5 HOH 9 1408 1408 HOH HOH A . J 5 HOH 10 1409 1409 HOH HOH A . J 5 HOH 11 1410 1410 HOH HOH A . J 5 HOH 12 1411 1411 HOH HOH A . J 5 HOH 13 1412 1412 HOH HOH A . J 5 HOH 14 1413 1413 HOH HOH A . J 5 HOH 15 1414 1414 HOH HOH A . J 5 HOH 16 1415 1415 HOH HOH A . J 5 HOH 17 1416 1416 HOH HOH A . J 5 HOH 18 1417 1417 HOH HOH A . J 5 HOH 19 1418 1418 HOH HOH A . J 5 HOH 20 1419 1419 HOH HOH A . J 5 HOH 21 1420 1420 HOH HOH A . J 5 HOH 22 1421 1421 HOH HOH A . J 5 HOH 23 1422 1422 HOH HOH A . J 5 HOH 24 1423 1423 HOH HOH A . J 5 HOH 25 1424 1424 HOH HOH A . J 5 HOH 26 1425 1425 HOH HOH A . J 5 HOH 27 1426 1426 HOH HOH A . J 5 HOH 28 1427 1427 HOH HOH A . J 5 HOH 29 1428 1428 HOH HOH A . J 5 HOH 30 1429 1429 HOH HOH A . J 5 HOH 31 1430 1430 HOH HOH A . J 5 HOH 32 1431 1431 HOH HOH A . J 5 HOH 33 1432 1432 HOH HOH A . J 5 HOH 34 1433 1433 HOH HOH A . J 5 HOH 35 1434 1434 HOH HOH A . J 5 HOH 36 1435 1435 HOH HOH A . J 5 HOH 37 1436 1436 HOH HOH A . J 5 HOH 38 1437 1437 HOH HOH A . J 5 HOH 39 1438 1438 HOH HOH A . J 5 HOH 40 1439 1439 HOH HOH A . J 5 HOH 41 1440 1440 HOH HOH A . J 5 HOH 42 1441 1441 HOH HOH A . J 5 HOH 43 1442 1442 HOH HOH A . J 5 HOH 44 1443 1443 HOH HOH A . J 5 HOH 45 1444 1444 HOH HOH A . J 5 HOH 46 1445 1445 HOH HOH A . J 5 HOH 47 1446 1446 HOH HOH A . J 5 HOH 48 1447 1447 HOH HOH A . J 5 HOH 49 1448 1448 HOH HOH A . J 5 HOH 50 1449 1449 HOH HOH A . J 5 HOH 51 1450 1450 HOH HOH A . J 5 HOH 52 1451 1451 HOH HOH A . J 5 HOH 53 1452 1452 HOH HOH A . J 5 HOH 54 1453 1453 HOH HOH A . J 5 HOH 55 1454 1454 HOH HOH A . J 5 HOH 56 1455 1455 HOH HOH A . J 5 HOH 57 1456 1456 HOH HOH A . J 5 HOH 58 1457 1457 HOH HOH A . J 5 HOH 59 1458 1458 HOH HOH A . J 5 HOH 60 1459 1459 HOH HOH A . J 5 HOH 61 1460 1460 HOH HOH A . J 5 HOH 62 1461 1461 HOH HOH A . J 5 HOH 63 1462 1462 HOH HOH A . J 5 HOH 64 1463 1463 HOH HOH A . J 5 HOH 65 1464 1464 HOH HOH A . J 5 HOH 66 1465 1465 HOH HOH A . J 5 HOH 67 1466 1466 HOH HOH A . J 5 HOH 68 1467 1467 HOH HOH A . J 5 HOH 69 1468 1468 HOH HOH A . J 5 HOH 70 1469 1469 HOH HOH A . J 5 HOH 71 1470 1470 HOH HOH A . J 5 HOH 72 1471 1471 HOH HOH A . J 5 HOH 73 1472 1472 HOH HOH A . J 5 HOH 74 1473 1473 HOH HOH A . J 5 HOH 75 1474 1474 HOH HOH A . J 5 HOH 76 1475 1475 HOH HOH A . J 5 HOH 77 1476 1476 HOH HOH A . J 5 HOH 78 1477 1477 HOH HOH A . J 5 HOH 79 1478 1478 HOH HOH A . J 5 HOH 80 1479 1479 HOH HOH A . J 5 HOH 81 1480 1480 HOH HOH A . J 5 HOH 82 1481 1481 HOH HOH A . J 5 HOH 83 1482 1482 HOH HOH A . J 5 HOH 84 1483 1483 HOH HOH A . J 5 HOH 85 1484 1484 HOH HOH A . J 5 HOH 86 1485 1485 HOH HOH A . J 5 HOH 87 1486 1486 HOH HOH A . J 5 HOH 88 1487 1487 HOH HOH A . J 5 HOH 89 1488 1488 HOH HOH A . J 5 HOH 90 1489 1489 HOH HOH A . J 5 HOH 91 1490 1490 HOH HOH A . J 5 HOH 92 1491 1491 HOH HOH A . J 5 HOH 93 1492 1492 HOH HOH A . J 5 HOH 94 1493 1493 HOH HOH A . J 5 HOH 95 1494 1494 HOH HOH A . J 5 HOH 96 1495 1495 HOH HOH A . J 5 HOH 97 1496 1496 HOH HOH A . J 5 HOH 98 1497 1497 HOH HOH A . J 5 HOH 99 1498 1498 HOH HOH A . J 5 HOH 100 1499 1499 HOH HOH A . J 5 HOH 101 1500 1500 HOH HOH A . J 5 HOH 102 1501 1501 HOH HOH A . J 5 HOH 103 1502 1502 HOH HOH A . J 5 HOH 104 1503 1503 HOH HOH A . J 5 HOH 105 1504 1504 HOH HOH A . J 5 HOH 106 1505 1505 HOH HOH A . J 5 HOH 107 1506 1506 HOH HOH A . J 5 HOH 108 1507 1507 HOH HOH A . J 5 HOH 109 1508 1508 HOH HOH A . J 5 HOH 110 1509 1509 HOH HOH A . J 5 HOH 111 1510 1510 HOH HOH A . J 5 HOH 112 1511 1511 HOH HOH A . J 5 HOH 113 1512 1512 HOH HOH A . J 5 HOH 114 1513 1513 HOH HOH A . J 5 HOH 115 1514 1514 HOH HOH A . J 5 HOH 116 1515 1515 HOH HOH A . J 5 HOH 117 1516 1516 HOH HOH A . J 5 HOH 118 1517 1517 HOH HOH A . J 5 HOH 119 1518 1518 HOH HOH A . J 5 HOH 120 1519 1519 HOH HOH A . J 5 HOH 121 1520 1520 HOH HOH A . J 5 HOH 122 1521 1521 HOH HOH A . J 5 HOH 123 1522 1522 HOH HOH A . J 5 HOH 124 1523 1523 HOH HOH A . J 5 HOH 125 1524 1524 HOH HOH A . J 5 HOH 126 1525 1525 HOH HOH A . J 5 HOH 127 1526 1526 HOH HOH A . J 5 HOH 128 1527 1527 HOH HOH A . J 5 HOH 129 1528 1528 HOH HOH A . J 5 HOH 130 1529 1529 HOH HOH A . J 5 HOH 131 1530 1530 HOH HOH A . J 5 HOH 132 1531 1531 HOH HOH A . J 5 HOH 133 1532 1532 HOH HOH A . J 5 HOH 134 1533 1533 HOH HOH A . J 5 HOH 135 1534 1534 HOH HOH A . J 5 HOH 136 1535 1535 HOH HOH A . J 5 HOH 137 1536 1536 HOH HOH A . J 5 HOH 138 1537 1537 HOH HOH A . J 5 HOH 139 1538 1538 HOH HOH A . J 5 HOH 140 1539 1539 HOH HOH A . J 5 HOH 141 1540 1540 HOH HOH A . J 5 HOH 142 1541 1541 HOH HOH A . J 5 HOH 143 1542 1542 HOH HOH A . J 5 HOH 144 1543 1543 HOH HOH A . J 5 HOH 145 1544 1544 HOH HOH A . J 5 HOH 146 1545 1545 HOH HOH A . J 5 HOH 147 1546 1546 HOH HOH A . J 5 HOH 148 1547 1547 HOH HOH A . J 5 HOH 149 1548 1548 HOH HOH A . J 5 HOH 150 1549 1549 HOH HOH A . J 5 HOH 151 1550 1550 HOH HOH A . J 5 HOH 152 1551 1551 HOH HOH A . J 5 HOH 153 1552 1552 HOH HOH A . J 5 HOH 154 1553 1553 HOH HOH A . J 5 HOH 155 1554 1554 HOH HOH A . J 5 HOH 156 1555 1555 HOH HOH A . J 5 HOH 157 1556 1556 HOH HOH A . J 5 HOH 158 1557 1557 HOH HOH A . J 5 HOH 159 1558 1558 HOH HOH A . J 5 HOH 160 1559 1559 HOH HOH A . J 5 HOH 161 1560 1560 HOH HOH A . J 5 HOH 162 1561 1561 HOH HOH A . J 5 HOH 163 1562 1562 HOH HOH A . J 5 HOH 164 1563 1563 HOH HOH A . J 5 HOH 165 1564 1564 HOH HOH A . J 5 HOH 166 1565 1565 HOH HOH A . J 5 HOH 167 1566 1566 HOH HOH A . J 5 HOH 168 1567 1567 HOH HOH A . J 5 HOH 169 1568 1568 HOH HOH A . J 5 HOH 170 1569 1569 HOH HOH A . J 5 HOH 171 1570 1570 HOH HOH A . J 5 HOH 172 1571 1571 HOH HOH A . J 5 HOH 173 1572 1572 HOH HOH A . J 5 HOH 174 1573 1573 HOH HOH A . J 5 HOH 175 1574 1574 HOH HOH A . J 5 HOH 176 1575 1575 HOH HOH A . J 5 HOH 177 1576 1576 HOH HOH A . J 5 HOH 178 1577 1577 HOH HOH A . J 5 HOH 179 1578 1578 HOH HOH A . J 5 HOH 180 1579 1579 HOH HOH A . J 5 HOH 181 1580 1580 HOH HOH A . J 5 HOH 182 1581 1581 HOH HOH A . J 5 HOH 183 1582 1582 HOH HOH A . J 5 HOH 184 1583 1583 HOH HOH A . J 5 HOH 185 1584 1584 HOH HOH A . J 5 HOH 186 1585 1585 HOH HOH A . J 5 HOH 187 1586 1586 HOH HOH A . J 5 HOH 188 1587 1587 HOH HOH A . J 5 HOH 189 1588 1588 HOH HOH A . J 5 HOH 190 1589 1589 HOH HOH A . J 5 HOH 191 1590 1590 HOH HOH A . J 5 HOH 192 1591 1591 HOH HOH A . J 5 HOH 193 1592 1592 HOH HOH A . J 5 HOH 194 1593 1593 HOH HOH A . J 5 HOH 195 1594 1594 HOH HOH A . J 5 HOH 196 1595 1595 HOH HOH A . J 5 HOH 197 1596 1596 HOH HOH A . J 5 HOH 198 1597 1597 HOH HOH A . J 5 HOH 199 1598 1598 HOH HOH A . J 5 HOH 200 1599 1599 HOH HOH A . J 5 HOH 201 1600 1600 HOH HOH A . J 5 HOH 202 1601 1601 HOH HOH A . J 5 HOH 203 1602 1602 HOH HOH A . J 5 HOH 204 1603 1603 HOH HOH A . J 5 HOH 205 1604 1604 HOH HOH A . J 5 HOH 206 1605 1605 HOH HOH A . J 5 HOH 207 1606 1606 HOH HOH A . J 5 HOH 208 1607 1607 HOH HOH A . J 5 HOH 209 1608 1608 HOH HOH A . J 5 HOH 210 1609 1609 HOH HOH A . J 5 HOH 211 1610 1610 HOH HOH A . J 5 HOH 212 1611 1611 HOH HOH A . J 5 HOH 213 1612 1612 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 20 ? A SER 34 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 OG1 ? A THR 38 ? A THR 52 ? 1_555 86.0 ? 2 OG ? A SER 20 ? A SER 34 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O2G ? C GNP . ? A GNP 200 ? 1_555 173.6 ? 3 OG1 ? A THR 38 ? A THR 52 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O2G ? C GNP . ? A GNP 200 ? 1_555 87.5 ? 4 OG ? A SER 20 ? A SER 34 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O2B ? C GNP . ? A GNP 200 ? 1_555 91.4 ? 5 OG1 ? A THR 38 ? A THR 52 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O2B ? C GNP . ? A GNP 200 ? 1_555 177.1 ? 6 O2G ? C GNP . ? A GNP 200 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O2B ? C GNP . ? A GNP 200 ? 1_555 95.0 ? 7 OG ? A SER 20 ? A SER 34 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1400 ? 1_555 87.7 ? 8 OG1 ? A THR 38 ? A THR 52 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1400 ? 1_555 90.1 ? 9 O2G ? C GNP . ? A GNP 200 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1400 ? 1_555 92.3 ? 10 O2B ? C GNP . ? A GNP 200 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1400 ? 1_555 88.2 ? 11 OG ? A SER 20 ? A SER 34 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1401 ? 1_555 86.1 ? 12 OG1 ? A THR 38 ? A THR 52 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1401 ? 1_555 91.2 ? 13 O2G ? C GNP . ? A GNP 200 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1401 ? 1_555 94.1 ? 14 O2B ? C GNP . ? A GNP 200 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1401 ? 1_555 90.1 ? 15 O ? J HOH . ? A HOH 1400 ? 1_555 MG ? B MG . ? A MG 300 ? 1_555 O ? J HOH . ? A HOH 1401 ? 1_555 173.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-12-23 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 SHELXL-97 refinement . ? 4 CNS phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 61 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1600 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 36 ? B CB A LEU 36 ? B CG A LEU 36 ? B 131.98 115.30 16.68 2.30 N 2 1 NH1 A ARG 39 ? ? CZ A ARG 39 ? ? NH2 A ARG 39 ? ? 126.65 119.40 7.25 1.10 N 3 1 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH2 A ARG 39 ? ? 114.18 120.30 -6.12 0.50 N 4 1 CA A THR 59 ? ? CB A THR 59 ? ? CG2 A THR 59 ? C 103.15 112.40 -9.25 1.40 N 5 1 CA A GLU 106 ? ? CB A GLU 106 ? ? CG A GLU 106 ? B 138.60 113.40 25.20 2.20 N 6 1 CA A ARG 120 ? ? CB A ARG 120 ? ? CG A ARG 120 ? C 127.37 113.40 13.97 2.20 N 7 1 CD A ARG 120 ? C NE A ARG 120 ? C CZ A ARG 120 ? C 146.01 123.60 22.41 1.40 N 8 1 NE A ARG 120 ? A CZ A ARG 120 ? A NH1 A ARG 120 ? A 125.83 120.30 5.53 0.50 N 9 1 NE A ARG 120 ? B CZ A ARG 120 ? B NH1 A ARG 120 ? B 127.76 120.30 7.46 0.50 N 10 1 NE A ARG 120 ? B CZ A ARG 120 ? B NH2 A ARG 120 ? B 113.12 120.30 -7.18 0.50 N 11 1 CB A PHE 174 ? ? CG A PHE 174 ? ? CD2 A PHE 174 ? ? 115.53 120.80 -5.27 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 30 ? ? 82.05 7.74 2 1 ASP A 65 ? ? 65.42 -124.97 3 1 LEU A 137 ? ? -98.80 32.36 4 1 SER A 167 ? ? 86.32 -3.96 5 1 LYS A 183 ? ? -147.80 36.17 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 140 ? NZ ? A LYS 126 NZ 2 1 Y 0 A LYS 179 ? CE ? A LYS 165 CE 3 1 Y 0 A LYS 179 ? NZ ? A LYS 165 NZ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GNP PG P N N 137 GNP O1G O N N 138 GNP O2G O N N 139 GNP O3G O N N 140 GNP N3B N N N 141 GNP PB P N R 142 GNP O1B O N N 143 GNP O2B O N N 144 GNP O3A O N N 145 GNP PA P N S 146 GNP O1A O N N 147 GNP O2A O N N 148 GNP "O5'" O N N 149 GNP "C5'" C N N 150 GNP "C4'" C N R 151 GNP "O4'" O N N 152 GNP "C3'" C N S 153 GNP "O3'" O N N 154 GNP "C2'" C N R 155 GNP "O2'" O N N 156 GNP "C1'" C N R 157 GNP N9 N Y N 158 GNP C8 C Y N 159 GNP N7 N Y N 160 GNP C5 C Y N 161 GNP C6 C Y N 162 GNP O6 O N N 163 GNP N1 N Y N 164 GNP C2 C Y N 165 GNP N2 N N N 166 GNP N3 N Y N 167 GNP C4 C Y N 168 GNP HOG2 H N N 169 GNP HOG3 H N N 170 GNP HNB3 H N N 171 GNP HOB2 H N N 172 GNP HOA2 H N N 173 GNP "H5'2" H N N 174 GNP "H5'1" H N N 175 GNP "H4'" H N N 176 GNP "H3'" H N N 177 GNP "HO3'" H N N 178 GNP "H2'" H N N 179 GNP "HO2'" H N N 180 GNP "H1'" H N N 181 GNP H8 H N N 182 GNP HN1 H N N 183 GNP HN21 H N N 184 GNP HN22 H N N 185 GOL C1 C N N 186 GOL O1 O N N 187 GOL C2 C N N 188 GOL O2 O N N 189 GOL C3 C N N 190 GOL O3 O N N 191 GOL H11 H N N 192 GOL H12 H N N 193 GOL HO1 H N N 194 GOL H2 H N N 195 GOL HO2 H N N 196 GOL H31 H N N 197 GOL H32 H N N 198 GOL HO3 H N N 199 HIS N N N N 200 HIS CA C N S 201 HIS C C N N 202 HIS O O N N 203 HIS CB C N N 204 HIS CG C Y N 205 HIS ND1 N Y N 206 HIS CD2 C Y N 207 HIS CE1 C Y N 208 HIS NE2 N Y N 209 HIS OXT O N N 210 HIS H H N N 211 HIS H2 H N N 212 HIS HA H N N 213 HIS HB2 H N N 214 HIS HB3 H N N 215 HIS HD1 H N N 216 HIS HD2 H N N 217 HIS HE1 H N N 218 HIS HE2 H N N 219 HIS HXT H N N 220 HOH O O N N 221 HOH H1 H N N 222 HOH H2 H N N 223 ILE N N N N 224 ILE CA C N S 225 ILE C C N N 226 ILE O O N N 227 ILE CB C N S 228 ILE CG1 C N N 229 ILE CG2 C N N 230 ILE CD1 C N N 231 ILE OXT O N N 232 ILE H H N N 233 ILE H2 H N N 234 ILE HA H N N 235 ILE HB H N N 236 ILE HG12 H N N 237 ILE HG13 H N N 238 ILE HG21 H N N 239 ILE HG22 H N N 240 ILE HG23 H N N 241 ILE HD11 H N N 242 ILE HD12 H N N 243 ILE HD13 H N N 244 ILE HXT H N N 245 LEU N N N N 246 LEU CA C N S 247 LEU C C N N 248 LEU O O N N 249 LEU CB C N N 250 LEU CG C N N 251 LEU CD1 C N N 252 LEU CD2 C N N 253 LEU OXT O N N 254 LEU H H N N 255 LEU H2 H N N 256 LEU HA H N N 257 LEU HB2 H N N 258 LEU HB3 H N N 259 LEU HG H N N 260 LEU HD11 H N N 261 LEU HD12 H N N 262 LEU HD13 H N N 263 LEU HD21 H N N 264 LEU HD22 H N N 265 LEU HD23 H N N 266 LEU HXT H N N 267 LYS N N N N 268 LYS CA C N S 269 LYS C C N N 270 LYS O O N N 271 LYS CB C N N 272 LYS CG C N N 273 LYS CD C N N 274 LYS CE C N N 275 LYS NZ N N N 276 LYS OXT O N N 277 LYS H H N N 278 LYS H2 H N N 279 LYS HA H N N 280 LYS HB2 H N N 281 LYS HB3 H N N 282 LYS HG2 H N N 283 LYS HG3 H N N 284 LYS HD2 H N N 285 LYS HD3 H N N 286 LYS HE2 H N N 287 LYS HE3 H N N 288 LYS HZ1 H N N 289 LYS HZ2 H N N 290 LYS HZ3 H N N 291 LYS HXT H N N 292 MET N N N N 293 MET CA C N S 294 MET C C N N 295 MET O O N N 296 MET CB C N N 297 MET CG C N N 298 MET SD S N N 299 MET CE C N N 300 MET OXT O N N 301 MET H H N N 302 MET H2 H N N 303 MET HA H N N 304 MET HB2 H N N 305 MET HB3 H N N 306 MET HG2 H N N 307 MET HG3 H N N 308 MET HE1 H N N 309 MET HE2 H N N 310 MET HE3 H N N 311 MET HXT H N N 312 MG MG MG N N 313 PHE N N N N 314 PHE CA C N S 315 PHE C C N N 316 PHE O O N N 317 PHE CB C N N 318 PHE CG C Y N 319 PHE CD1 C Y N 320 PHE CD2 C Y N 321 PHE CE1 C Y N 322 PHE CE2 C Y N 323 PHE CZ C Y N 324 PHE OXT O N N 325 PHE H H N N 326 PHE H2 H N N 327 PHE HA H N N 328 PHE HB2 H N N 329 PHE HB3 H N N 330 PHE HD1 H N N 331 PHE HD2 H N N 332 PHE HE1 H N N 333 PHE HE2 H N N 334 PHE HZ H N N 335 PHE HXT H N N 336 PRO N N N N 337 PRO CA C N S 338 PRO C C N N 339 PRO O O N N 340 PRO CB C N N 341 PRO CG C N N 342 PRO CD C N N 343 PRO OXT O N N 344 PRO H H N N 345 PRO HA H N N 346 PRO HB2 H N N 347 PRO HB3 H N N 348 PRO HG2 H N N 349 PRO HG3 H N N 350 PRO HD2 H N N 351 PRO HD3 H N N 352 PRO HXT H N N 353 SER N N N N 354 SER CA C N S 355 SER C C N N 356 SER O O N N 357 SER CB C N N 358 SER OG O N N 359 SER OXT O N N 360 SER H H N N 361 SER H2 H N N 362 SER HA H N N 363 SER HB2 H N N 364 SER HB3 H N N 365 SER HG H N N 366 SER HXT H N N 367 THR N N N N 368 THR CA C N S 369 THR C C N N 370 THR O O N N 371 THR CB C N R 372 THR OG1 O N N 373 THR CG2 C N N 374 THR OXT O N N 375 THR H H N N 376 THR H2 H N N 377 THR HA H N N 378 THR HB H N N 379 THR HG1 H N N 380 THR HG21 H N N 381 THR HG22 H N N 382 THR HG23 H N N 383 THR HXT H N N 384 TRP N N N N 385 TRP CA C N S 386 TRP C C N N 387 TRP O O N N 388 TRP CB C N N 389 TRP CG C Y N 390 TRP CD1 C Y N 391 TRP CD2 C Y N 392 TRP NE1 N Y N 393 TRP CE2 C Y N 394 TRP CE3 C Y N 395 TRP CZ2 C Y N 396 TRP CZ3 C Y N 397 TRP CH2 C Y N 398 TRP OXT O N N 399 TRP H H N N 400 TRP H2 H N N 401 TRP HA H N N 402 TRP HB2 H N N 403 TRP HB3 H N N 404 TRP HD1 H N N 405 TRP HE1 H N N 406 TRP HE3 H N N 407 TRP HZ2 H N N 408 TRP HZ3 H N N 409 TRP HH2 H N N 410 TRP HXT H N N 411 TYR N N N N 412 TYR CA C N S 413 TYR C C N N 414 TYR O O N N 415 TYR CB C N N 416 TYR CG C Y N 417 TYR CD1 C Y N 418 TYR CD2 C Y N 419 TYR CE1 C Y N 420 TYR CE2 C Y N 421 TYR CZ C Y N 422 TYR OH O N N 423 TYR OXT O N N 424 TYR H H N N 425 TYR H2 H N N 426 TYR HA H N N 427 TYR HB2 H N N 428 TYR HB3 H N N 429 TYR HD1 H N N 430 TYR HD2 H N N 431 TYR HE1 H N N 432 TYR HE2 H N N 433 TYR HH H N N 434 TYR HXT H N N 435 VAL N N N N 436 VAL CA C N S 437 VAL C C N N 438 VAL O O N N 439 VAL CB C N N 440 VAL CG1 C N N 441 VAL CG2 C N N 442 VAL OXT O N N 443 VAL H H N N 444 VAL H2 H N N 445 VAL HA H N N 446 VAL HB H N N 447 VAL HG11 H N N 448 VAL HG12 H N N 449 VAL HG13 H N N 450 VAL HG21 H N N 451 VAL HG22 H N N 452 VAL HG23 H N N 453 VAL HXT H N N 454 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GNP PG O1G doub N N 129 GNP PG O2G sing N N 130 GNP PG O3G sing N N 131 GNP PG N3B sing N N 132 GNP O2G HOG2 sing N N 133 GNP O3G HOG3 sing N N 134 GNP N3B PB sing N N 135 GNP N3B HNB3 sing N N 136 GNP PB O1B doub N N 137 GNP PB O2B sing N N 138 GNP PB O3A sing N N 139 GNP O2B HOB2 sing N N 140 GNP O3A PA sing N N 141 GNP PA O1A doub N N 142 GNP PA O2A sing N N 143 GNP PA "O5'" sing N N 144 GNP O2A HOA2 sing N N 145 GNP "O5'" "C5'" sing N N 146 GNP "C5'" "C4'" sing N N 147 GNP "C5'" "H5'2" sing N N 148 GNP "C5'" "H5'1" sing N N 149 GNP "C4'" "O4'" sing N N 150 GNP "C4'" "C3'" sing N N 151 GNP "C4'" "H4'" sing N N 152 GNP "O4'" "C1'" sing N N 153 GNP "C3'" "O3'" sing N N 154 GNP "C3'" "C2'" sing N N 155 GNP "C3'" "H3'" sing N N 156 GNP "O3'" "HO3'" sing N N 157 GNP "C2'" "O2'" sing N N 158 GNP "C2'" "C1'" sing N N 159 GNP "C2'" "H2'" sing N N 160 GNP "O2'" "HO2'" sing N N 161 GNP "C1'" N9 sing N N 162 GNP "C1'" "H1'" sing N N 163 GNP N9 C8 sing Y N 164 GNP N9 C4 sing Y N 165 GNP C8 N7 doub Y N 166 GNP C8 H8 sing N N 167 GNP N7 C5 sing Y N 168 GNP C5 C6 sing Y N 169 GNP C5 C4 doub Y N 170 GNP C6 O6 doub N N 171 GNP C6 N1 sing Y N 172 GNP N1 C2 sing Y N 173 GNP N1 HN1 sing N N 174 GNP C2 N2 sing N N 175 GNP C2 N3 doub Y N 176 GNP N2 HN21 sing N N 177 GNP N2 HN22 sing N N 178 GNP N3 C4 sing Y N 179 GOL C1 O1 sing N N 180 GOL C1 C2 sing N N 181 GOL C1 H11 sing N N 182 GOL C1 H12 sing N N 183 GOL O1 HO1 sing N N 184 GOL C2 O2 sing N N 185 GOL C2 C3 sing N N 186 GOL C2 H2 sing N N 187 GOL O2 HO2 sing N N 188 GOL C3 O3 sing N N 189 GOL C3 H31 sing N N 190 GOL C3 H32 sing N N 191 GOL O3 HO3 sing N N 192 HIS N CA sing N N 193 HIS N H sing N N 194 HIS N H2 sing N N 195 HIS CA C sing N N 196 HIS CA CB sing N N 197 HIS CA HA sing N N 198 HIS C O doub N N 199 HIS C OXT sing N N 200 HIS CB CG sing N N 201 HIS CB HB2 sing N N 202 HIS CB HB3 sing N N 203 HIS CG ND1 sing Y N 204 HIS CG CD2 doub Y N 205 HIS ND1 CE1 doub Y N 206 HIS ND1 HD1 sing N N 207 HIS CD2 NE2 sing Y N 208 HIS CD2 HD2 sing N N 209 HIS CE1 NE2 sing Y N 210 HIS CE1 HE1 sing N N 211 HIS NE2 HE2 sing N N 212 HIS OXT HXT sing N N 213 HOH O H1 sing N N 214 HOH O H2 sing N N 215 ILE N CA sing N N 216 ILE N H sing N N 217 ILE N H2 sing N N 218 ILE CA C sing N N 219 ILE CA CB sing N N 220 ILE CA HA sing N N 221 ILE C O doub N N 222 ILE C OXT sing N N 223 ILE CB CG1 sing N N 224 ILE CB CG2 sing N N 225 ILE CB HB sing N N 226 ILE CG1 CD1 sing N N 227 ILE CG1 HG12 sing N N 228 ILE CG1 HG13 sing N N 229 ILE CG2 HG21 sing N N 230 ILE CG2 HG22 sing N N 231 ILE CG2 HG23 sing N N 232 ILE CD1 HD11 sing N N 233 ILE CD1 HD12 sing N N 234 ILE CD1 HD13 sing N N 235 ILE OXT HXT sing N N 236 LEU N CA sing N N 237 LEU N H sing N N 238 LEU N H2 sing N N 239 LEU CA C sing N N 240 LEU CA CB sing N N 241 LEU CA HA sing N N 242 LEU C O doub N N 243 LEU C OXT sing N N 244 LEU CB CG sing N N 245 LEU CB HB2 sing N N 246 LEU CB HB3 sing N N 247 LEU CG CD1 sing N N 248 LEU CG CD2 sing N N 249 LEU CG HG sing N N 250 LEU CD1 HD11 sing N N 251 LEU CD1 HD12 sing N N 252 LEU CD1 HD13 sing N N 253 LEU CD2 HD21 sing N N 254 LEU CD2 HD22 sing N N 255 LEU CD2 HD23 sing N N 256 LEU OXT HXT sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 MET N CA sing N N 282 MET N H sing N N 283 MET N H2 sing N N 284 MET CA C sing N N 285 MET CA CB sing N N 286 MET CA HA sing N N 287 MET C O doub N N 288 MET C OXT sing N N 289 MET CB CG sing N N 290 MET CB HB2 sing N N 291 MET CB HB3 sing N N 292 MET CG SD sing N N 293 MET CG HG2 sing N N 294 MET CG HG3 sing N N 295 MET SD CE sing N N 296 MET CE HE1 sing N N 297 MET CE HE2 sing N N 298 MET CE HE3 sing N N 299 MET OXT HXT sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SER N CA sing N N 341 SER N H sing N N 342 SER N H2 sing N N 343 SER CA C sing N N 344 SER CA CB sing N N 345 SER CA HA sing N N 346 SER C O doub N N 347 SER C OXT sing N N 348 SER CB OG sing N N 349 SER CB HB2 sing N N 350 SER CB HB3 sing N N 351 SER OG HG sing N N 352 SER OXT HXT sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1N6N _pdbx_initial_refinement_model.details 'PDB ENTRY 1N6N' #