data_1R2Y # _entry.id 1R2Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1R2Y pdb_00001r2y 10.2210/pdb1r2y/pdb NDB PD0473 ? ? RCSB RCSB020371 ? ? WWPDB D_1000020371 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1L1T 'Mutm (Fpg) Bound To Abasic-Site Containing DNA' unspecified PDB 1L1Z 'Mutm (Fpg) Covalent-DNA Intermediate' unspecified PDB 1L2B 'Mutm (Fpg) DNA End-Product Structure' unspecified PDB 1L2C 'Mutm (Fpg)-DNA Estranged Thymine Mismatch Recognition Complex' unspecified PDB 1L2D 'Mutm (Fpg)-DNA Estranged Guanine Mismatch Recognition Complex' unspecified PDB 1R2Z 'MutM (Fpg) bound to 5,6-dihydrouracil (DHU) containing DNA' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R2Y _pdbx_database_status.recvd_initial_deposition_date 2003-09-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fromme, J.C.' 1 'Verdine, G.L.' 2 # _citation.id primary _citation.title 'DNA Lesion Recognition by the Bacterial Repair Enzyme MutM.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 51543 _citation.page_last 51548 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14525999 _citation.pdbx_database_id_DOI 10.1074/jbc.M307768200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fromme, J.C.' 1 ? primary 'Verdine, G.L.' 2 ? # _cell.entry_id 1R2Y _cell.length_a 44.290 _cell.length_b 93.634 _cell.length_c 102.221 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R2Y _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'" 3687.417 1 ? ? ? ? 2 polymer syn "5'-D(*TP*GP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'" 3654.379 1 ? ? ? ? 3 polymer man MutM 30738.525 1 ? E3Q ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name FPG # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)' GTAGACCTGGAC B ? 2 polydeoxyribonucleotide no yes '(DG)(DT)(DC)(DC)(DA)(8OG)(DG)(DT)(DC)(DT)(DA)(DC)' GTCCAGGTCTAC C ? 3 'polypeptide(L)' no no ;MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGR YAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVK ALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLY VYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; ;MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGR YAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVK ALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLY VYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DA n 1 4 DG n 1 5 DA n 1 6 DC n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DA n 1 12 DC n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DC n 2 5 DA n 2 6 8OG n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DT n 2 11 DA n 2 12 DC n 3 1 MET n 3 2 PRO n 3 3 GLN n 3 4 LEU n 3 5 PRO n 3 6 GLU n 3 7 VAL n 3 8 GLU n 3 9 THR n 3 10 ILE n 3 11 ARG n 3 12 ARG n 3 13 THR n 3 14 LEU n 3 15 LEU n 3 16 PRO n 3 17 LEU n 3 18 ILE n 3 19 VAL n 3 20 GLY n 3 21 LYS n 3 22 THR n 3 23 ILE n 3 24 GLU n 3 25 ASP n 3 26 VAL n 3 27 ARG n 3 28 ILE n 3 29 PHE n 3 30 TRP n 3 31 PRO n 3 32 ASN n 3 33 ILE n 3 34 ILE n 3 35 ARG n 3 36 HIS n 3 37 PRO n 3 38 ARG n 3 39 ASP n 3 40 SER n 3 41 GLU n 3 42 ALA n 3 43 PHE n 3 44 ALA n 3 45 ALA n 3 46 ARG n 3 47 MET n 3 48 ILE n 3 49 GLY n 3 50 GLN n 3 51 THR n 3 52 VAL n 3 53 ARG n 3 54 GLY n 3 55 LEU n 3 56 GLU n 3 57 ARG n 3 58 ARG n 3 59 GLY n 3 60 LYS n 3 61 PHE n 3 62 LEU n 3 63 LYS n 3 64 PHE n 3 65 LEU n 3 66 LEU n 3 67 ASP n 3 68 ARG n 3 69 ASP n 3 70 ALA n 3 71 LEU n 3 72 ILE n 3 73 SER n 3 74 HIS n 3 75 LEU n 3 76 ARG n 3 77 MET n 3 78 GLU n 3 79 GLY n 3 80 ARG n 3 81 TYR n 3 82 ALA n 3 83 VAL n 3 84 ALA n 3 85 SER n 3 86 ALA n 3 87 LEU n 3 88 GLU n 3 89 PRO n 3 90 LEU n 3 91 GLU n 3 92 PRO n 3 93 HIS n 3 94 THR n 3 95 HIS n 3 96 VAL n 3 97 VAL n 3 98 PHE n 3 99 CYS n 3 100 PHE n 3 101 THR n 3 102 ASP n 3 103 GLY n 3 104 SER n 3 105 GLU n 3 106 LEU n 3 107 ARG n 3 108 TYR n 3 109 ARG n 3 110 ASP n 3 111 VAL n 3 112 ARG n 3 113 LYS n 3 114 PHE n 3 115 GLY n 3 116 THR n 3 117 MET n 3 118 HIS n 3 119 VAL n 3 120 TYR n 3 121 ALA n 3 122 LYS n 3 123 GLU n 3 124 GLU n 3 125 ALA n 3 126 ASP n 3 127 ARG n 3 128 ARG n 3 129 PRO n 3 130 PRO n 3 131 LEU n 3 132 ALA n 3 133 GLU n 3 134 LEU n 3 135 GLY n 3 136 PRO n 3 137 GLU n 3 138 PRO n 3 139 LEU n 3 140 SER n 3 141 PRO n 3 142 ALA n 3 143 PHE n 3 144 SER n 3 145 PRO n 3 146 ALA n 3 147 VAL n 3 148 LEU n 3 149 ALA n 3 150 GLU n 3 151 ARG n 3 152 ALA n 3 153 VAL n 3 154 LYS n 3 155 THR n 3 156 LYS n 3 157 ARG n 3 158 SER n 3 159 VAL n 3 160 LYS n 3 161 ALA n 3 162 LEU n 3 163 LEU n 3 164 LEU n 3 165 ASP n 3 166 GLN n 3 167 THR n 3 168 VAL n 3 169 VAL n 3 170 ALA n 3 171 GLY n 3 172 PHE n 3 173 GLY n 3 174 ASN n 3 175 ILE n 3 176 TYR n 3 177 VAL n 3 178 ASP n 3 179 GLU n 3 180 SER n 3 181 LEU n 3 182 PHE n 3 183 ARG n 3 184 ALA n 3 185 GLY n 3 186 ILE n 3 187 LEU n 3 188 PRO n 3 189 GLY n 3 190 ARG n 3 191 PRO n 3 192 ALA n 3 193 ALA n 3 194 SER n 3 195 LEU n 3 196 SER n 3 197 SER n 3 198 LYS n 3 199 GLU n 3 200 ILE n 3 201 GLU n 3 202 ARG n 3 203 LEU n 3 204 HIS n 3 205 GLU n 3 206 GLU n 3 207 MET n 3 208 VAL n 3 209 ALA n 3 210 THR n 3 211 ILE n 3 212 GLY n 3 213 GLU n 3 214 ALA n 3 215 VAL n 3 216 MET n 3 217 LYS n 3 218 GLY n 3 219 GLY n 3 220 SER n 3 221 THR n 3 222 VAL n 3 223 ARG n 3 224 THR n 3 225 TYR n 3 226 VAL n 3 227 ASN n 3 228 THR n 3 229 GLN n 3 230 GLY n 3 231 GLU n 3 232 ALA n 3 233 GLY n 3 234 THR n 3 235 PHE n 3 236 GLN n 3 237 HIS n 3 238 HIS n 3 239 LEU n 3 240 TYR n 3 241 VAL n 3 242 TYR n 3 243 GLY n 3 244 ARG n 3 245 GLN n 3 246 GLY n 3 247 ASN n 3 248 PRO n 3 249 CYS n 3 250 LYS n 3 251 ARG n 3 252 CYS n 3 253 GLY n 3 254 THR n 3 255 PRO n 3 256 ILE n 3 257 GLU n 3 258 LYS n 3 259 THR n 3 260 VAL n 3 261 VAL n 3 262 ALA n 3 263 GLY n 3 264 ARG n 3 265 GLY n 3 266 THR n 3 267 HIS n 3 268 TYR n 3 269 CYS n 3 270 PRO n 3 271 ARG n 3 272 CYS n 3 273 GLN n 3 274 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Geobacillus _entity_src_gen.pdbx_gene_src_gene mutm _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP P84131_BACST P84131 3 1 ? ? 2 PDB 1R2Y 1R2Y 1 ? ? ? 3 PDB 1R2Y 1R2Y 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1R2Y A 1 ? 274 ? P84131 1 ? 274 ? 1 274 2 2 1R2Y B 1 ? 12 ? 1R2Y 1 ? 12 ? 1 12 3 3 1R2Y C 1 ? 12 ? 1R2Y 13 ? 24 ? 13 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1R2Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.45 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, MAGNESIUM ACETATE, SODIUM CACODYLATE, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 'MAGNESIUM ACETATE' ? ? ? 1 3 1 'SODIUM CACODYLATE' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 8000' ? ? ? 1 6 2 'MAGNESIUM ACETATE' ? ? ? 1 7 2 'SODIUM CACODYLATE' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2003-03-28 _diffrn_detector.details Osmic # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1R2Y _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.34 _reflns.number_obs 18601 _reflns.number_all 18609 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.9 _reflns.B_iso_Wilson_estimate 24.0 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.34 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.395 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1810 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R2Y _refine.ls_number_reflns_obs 17910 _refine.ls_number_reflns_all 18598 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 329052.00 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF 329052.00 _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.34 _refine.ls_percent_reflns_obs 96.3 _refine.ls_R_factor_obs 0.211 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.211 _refine.ls_R_factor_R_free 0.257 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.9 _refine.ls_number_reflns_R_free 1233 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.2 _refine.aniso_B[1][1] 1.53 _refine.aniso_B[2][2] 2.55 _refine.aniso_B[3][3] -4.08 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.351345 _refine.solvent_model_param_bsol 33.732 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1L1T _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1R2Y _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.16 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.22 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2108 _refine_hist.pdbx_number_atoms_nucleic_acid 487 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 2731 _refine_hist.d_res_high 2.34 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.96 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.19 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.82 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.64 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.62 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.34 _refine_ls_shell.d_res_low 2.42 _refine_ls_shell.number_reflns_R_work 1549 _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.percent_reflns_obs 91.3 _refine_ls_shell.R_factor_R_free 0.265 _refine_ls_shell.R_factor_R_free_error 0.027 _refine_ls_shell.percent_reflns_R_free 6.1 _refine_ls_shell.number_reflns_R_free 100 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 WATER_REP.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 OXOG.PARAM OXOG.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1R2Y _struct.title 'MutM (Fpg) bound to 8-oxoguanine (oxoG) containing DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R2Y _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'DNA REPAIR, DNA GLYCOSYLASE, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN C 3 ? VAL C 19 ? GLN A 3 VAL A 19 1 ? 17 HELX_P HELX_P2 2 TRP C 30 ? ASN C 32 ? TRP A 30 ASN A 32 5 ? 3 HELX_P HELX_P3 3 ASP C 39 ? ILE C 48 ? ASP A 39 ILE A 48 1 ? 10 HELX_P HELX_P4 4 LYS C 122 ? ASP C 126 ? LYS A 122 ASP A 126 1 ? 5 HELX_P HELX_P5 5 SER C 144 ? VAL C 153 ? SER A 144 VAL A 153 1 ? 10 HELX_P HELX_P6 6 SER C 158 ? ASP C 165 ? SER A 158 ASP A 165 1 ? 8 HELX_P HELX_P7 7 GLY C 173 ? ALA C 184 ? GLY A 173 ALA A 184 1 ? 12 HELX_P HELX_P8 8 PRO C 191 ? LEU C 195 ? PRO A 191 LEU A 195 5 ? 5 HELX_P HELX_P9 9 SER C 196 ? LYS C 217 ? SER A 196 LYS A 217 1 ? 22 HELX_P HELX_P10 10 THR C 234 ? LEU C 239 ? THR A 234 LEU A 239 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 5 "O3'" ? ? ? 1_555 B 8OG 6 P ? ? C DA 17 C 8OG 18 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale2 covale both ? B 8OG 6 "O3'" ? ? ? 1_555 B DG 7 P ? ? C 8OG 18 C DG 19 1_555 ? ? ? ? ? ? ? 1.582 ? ? metalc1 metalc ? ? C CYS 249 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 249 A ZN 300 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc2 metalc ? ? C CYS 252 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 252 A ZN 300 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc3 metalc ? ? C CYS 269 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 269 A ZN 300 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc4 metalc ? ? C CYS 272 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 272 A ZN 300 1_555 ? ? ? ? ? ? ? 2.336 ? ? hydrog1 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 1 C DC 24 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 11 N1 ? ? B DT 2 C DA 23 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog3 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 3 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 3 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 4 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 4 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 4 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 5 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 5 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 6 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 6 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 6 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? B DT 8 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? B DT 8 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 9 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 9 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 9 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 10 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? B DG 10 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? B DG 10 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 2 N3 ? ? B DA 11 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 2 O4 ? ? B DA 11 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 1 N1 ? ? B DC 12 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 1 O6 ? ? B DC 12 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 12 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 36 C . ? HIS 36 A PRO 37 C ? PRO 37 A 1 -0.59 2 PRO 129 C . ? PRO 129 A PRO 130 C ? PRO 130 A 1 0.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE C 23 ? ILE C 28 ? ILE A 23 ILE A 28 A 2 THR C 94 ? PHE C 100 ? THR A 94 PHE A 100 A 3 SER C 104 ? ARG C 109 ? SER A 104 ARG A 109 A 4 ARG C 80 ? SER C 85 ? ARG A 80 SER A 85 B 1 ILE C 34 ? HIS C 36 ? ILE A 34 HIS A 36 B 2 THR C 116 ? ALA C 121 ? THR A 116 ALA A 121 B 3 ASP C 69 ? HIS C 74 ? ASP A 69 HIS A 74 B 4 PHE C 61 ? LEU C 65 ? PHE A 61 LEU A 65 B 5 GLY C 54 ? ARG C 58 ? GLY A 54 ARG A 58 C 1 GLU C 257 ? VAL C 261 ? GLU A 257 VAL A 261 C 2 ARG C 264 ? TYR C 268 ? ARG A 264 TYR A 268 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP C 25 ? N ASP A 25 O CYS C 99 ? O CYS A 99 A 2 3 N PHE C 98 ? N PHE A 98 O LEU C 106 ? O LEU A 106 A 3 4 O ARG C 107 ? O ARG A 107 N ALA C 82 ? N ALA A 82 B 1 2 N HIS C 36 ? N HIS A 36 O VAL C 119 ? O VAL A 119 B 2 3 O HIS C 118 ? O HIS A 118 N ILE C 72 ? N ILE A 72 B 3 4 O SER C 73 ? O SER A 73 N LEU C 62 ? N LEU A 62 B 4 5 O LYS C 63 ? O LYS A 63 N GLU C 56 ? N GLU A 56 C 1 2 N GLU C 257 ? N GLU A 257 O TYR C 268 ? O TYR A 268 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS C 249 ? CYS A 249 . ? 1_555 ? 2 AC1 4 CYS C 252 ? CYS A 252 . ? 1_555 ? 3 AC1 4 CYS C 269 ? CYS A 269 . ? 1_555 ? 4 AC1 4 CYS C 272 ? CYS A 272 . ? 1_555 ? # _database_PDB_matrix.entry_id 1R2Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1R2Y _atom_sites.fract_transf_matrix[1][1] 0.022578 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010680 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009783 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG GUA B . n A 1 2 DT 2 2 2 DT THY B . n A 1 3 DA 3 3 3 DA ADE B . n A 1 4 DG 4 4 4 DG GUA B . n A 1 5 DA 5 5 5 DA ADE B . n A 1 6 DC 6 6 6 DC CYT B . n A 1 7 DC 7 7 7 DC CYT B . n A 1 8 DT 8 8 8 DT THY B . n A 1 9 DG 9 9 9 DG GUA B . n A 1 10 DG 10 10 10 DG GUA B . n A 1 11 DA 11 11 11 DA ADE B . n A 1 12 DC 12 12 12 DC CYT B . n B 2 1 DG 1 13 13 DG GUA C . n B 2 2 DT 2 14 14 DT THY C . n B 2 3 DC 3 15 15 DC CYT C . n B 2 4 DC 4 16 16 DC CYT C . n B 2 5 DA 5 17 17 DA ADE C . n B 2 6 8OG 6 18 18 8OG 8OG C . n B 2 7 DG 7 19 19 DG GUA C . n B 2 8 DT 8 20 20 DT THY C . n B 2 9 DC 9 21 21 DC CYT C . n B 2 10 DT 10 22 22 DT THY C . n B 2 11 DA 11 23 23 DA ADE C . n B 2 12 DC 12 24 24 DC CYT C . n C 3 1 MET 1 1 ? ? ? A . n C 3 2 PRO 2 2 2 PRO PRO A . n C 3 3 GLN 3 3 3 GLN GLN A . n C 3 4 LEU 4 4 4 LEU LEU A . n C 3 5 PRO 5 5 5 PRO PRO A . n C 3 6 GLU 6 6 6 GLU GLU A . n C 3 7 VAL 7 7 7 VAL VAL A . n C 3 8 GLU 8 8 8 GLU GLU A . n C 3 9 THR 9 9 9 THR THR A . n C 3 10 ILE 10 10 10 ILE ILE A . n C 3 11 ARG 11 11 11 ARG ARG A . n C 3 12 ARG 12 12 12 ARG ARG A . n C 3 13 THR 13 13 13 THR THR A . n C 3 14 LEU 14 14 14 LEU LEU A . n C 3 15 LEU 15 15 15 LEU LEU A . n C 3 16 PRO 16 16 16 PRO PRO A . n C 3 17 LEU 17 17 17 LEU LEU A . n C 3 18 ILE 18 18 18 ILE ILE A . n C 3 19 VAL 19 19 19 VAL VAL A . n C 3 20 GLY 20 20 20 GLY GLY A . n C 3 21 LYS 21 21 21 LYS LYS A . n C 3 22 THR 22 22 22 THR THR A . n C 3 23 ILE 23 23 23 ILE ILE A . n C 3 24 GLU 24 24 24 GLU GLU A . n C 3 25 ASP 25 25 25 ASP ASP A . n C 3 26 VAL 26 26 26 VAL VAL A . n C 3 27 ARG 27 27 27 ARG ARG A . n C 3 28 ILE 28 28 28 ILE ILE A . n C 3 29 PHE 29 29 29 PHE PHE A . n C 3 30 TRP 30 30 30 TRP TRP A . n C 3 31 PRO 31 31 31 PRO PRO A . n C 3 32 ASN 32 32 32 ASN ASN A . n C 3 33 ILE 33 33 33 ILE ILE A . n C 3 34 ILE 34 34 34 ILE ILE A . n C 3 35 ARG 35 35 35 ARG ARG A . n C 3 36 HIS 36 36 36 HIS HIS A . n C 3 37 PRO 37 37 37 PRO PRO A . n C 3 38 ARG 38 38 38 ARG ARG A . n C 3 39 ASP 39 39 39 ASP ASP A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 GLU 41 41 41 GLU GLU A . n C 3 42 ALA 42 42 42 ALA ALA A . n C 3 43 PHE 43 43 43 PHE PHE A . n C 3 44 ALA 44 44 44 ALA ALA A . n C 3 45 ALA 45 45 45 ALA ALA A . n C 3 46 ARG 46 46 46 ARG ARG A . n C 3 47 MET 47 47 47 MET MET A . n C 3 48 ILE 48 48 48 ILE ILE A . n C 3 49 GLY 49 49 49 GLY GLY A . n C 3 50 GLN 50 50 50 GLN GLN A . n C 3 51 THR 51 51 51 THR THR A . n C 3 52 VAL 52 52 52 VAL VAL A . n C 3 53 ARG 53 53 53 ARG ARG A . n C 3 54 GLY 54 54 54 GLY GLY A . n C 3 55 LEU 55 55 55 LEU LEU A . n C 3 56 GLU 56 56 56 GLU GLU A . n C 3 57 ARG 57 57 57 ARG ARG A . n C 3 58 ARG 58 58 58 ARG ARG A . n C 3 59 GLY 59 59 59 GLY GLY A . n C 3 60 LYS 60 60 60 LYS LYS A . n C 3 61 PHE 61 61 61 PHE PHE A . n C 3 62 LEU 62 62 62 LEU LEU A . n C 3 63 LYS 63 63 63 LYS LYS A . n C 3 64 PHE 64 64 64 PHE PHE A . n C 3 65 LEU 65 65 65 LEU LEU A . n C 3 66 LEU 66 66 66 LEU LEU A . n C 3 67 ASP 67 67 67 ASP ASP A . n C 3 68 ARG 68 68 68 ARG ARG A . n C 3 69 ASP 69 69 69 ASP ASP A . n C 3 70 ALA 70 70 70 ALA ALA A . n C 3 71 LEU 71 71 71 LEU LEU A . n C 3 72 ILE 72 72 72 ILE ILE A . n C 3 73 SER 73 73 73 SER SER A . n C 3 74 HIS 74 74 74 HIS HIS A . n C 3 75 LEU 75 75 75 LEU LEU A . n C 3 76 ARG 76 76 76 ARG ARG A . n C 3 77 MET 77 77 77 MET MET A . n C 3 78 GLU 78 78 78 GLU GLU A . n C 3 79 GLY 79 79 79 GLY GLY A . n C 3 80 ARG 80 80 80 ARG ARG A . n C 3 81 TYR 81 81 81 TYR TYR A . n C 3 82 ALA 82 82 82 ALA ALA A . n C 3 83 VAL 83 83 83 VAL VAL A . n C 3 84 ALA 84 84 84 ALA ALA A . n C 3 85 SER 85 85 85 SER SER A . n C 3 86 ALA 86 86 86 ALA ALA A . n C 3 87 LEU 87 87 87 LEU LEU A . n C 3 88 GLU 88 88 88 GLU GLU A . n C 3 89 PRO 89 89 89 PRO PRO A . n C 3 90 LEU 90 90 90 LEU LEU A . n C 3 91 GLU 91 91 91 GLU GLU A . n C 3 92 PRO 92 92 92 PRO PRO A . n C 3 93 HIS 93 93 93 HIS HIS A . n C 3 94 THR 94 94 94 THR THR A . n C 3 95 HIS 95 95 95 HIS HIS A . n C 3 96 VAL 96 96 96 VAL VAL A . n C 3 97 VAL 97 97 97 VAL VAL A . n C 3 98 PHE 98 98 98 PHE PHE A . n C 3 99 CYS 99 99 99 CYS CYS A . n C 3 100 PHE 100 100 100 PHE PHE A . n C 3 101 THR 101 101 101 THR THR A . n C 3 102 ASP 102 102 102 ASP ASP A . n C 3 103 GLY 103 103 103 GLY GLY A . n C 3 104 SER 104 104 104 SER SER A . n C 3 105 GLU 105 105 105 GLU GLU A . n C 3 106 LEU 106 106 106 LEU LEU A . n C 3 107 ARG 107 107 107 ARG ARG A . n C 3 108 TYR 108 108 108 TYR TYR A . n C 3 109 ARG 109 109 109 ARG ARG A . n C 3 110 ASP 110 110 110 ASP ASP A . n C 3 111 VAL 111 111 111 VAL VAL A . n C 3 112 ARG 112 112 112 ARG ARG A . n C 3 113 LYS 113 113 113 LYS LYS A . n C 3 114 PHE 114 114 114 PHE PHE A . n C 3 115 GLY 115 115 115 GLY GLY A . n C 3 116 THR 116 116 116 THR THR A . n C 3 117 MET 117 117 117 MET MET A . n C 3 118 HIS 118 118 118 HIS HIS A . n C 3 119 VAL 119 119 119 VAL VAL A . n C 3 120 TYR 120 120 120 TYR TYR A . n C 3 121 ALA 121 121 121 ALA ALA A . n C 3 122 LYS 122 122 122 LYS LYS A . n C 3 123 GLU 123 123 123 GLU GLU A . n C 3 124 GLU 124 124 124 GLU GLU A . n C 3 125 ALA 125 125 125 ALA ALA A . n C 3 126 ASP 126 126 126 ASP ASP A . n C 3 127 ARG 127 127 127 ARG ARG A . n C 3 128 ARG 128 128 128 ARG ARG A . n C 3 129 PRO 129 129 129 PRO PRO A . n C 3 130 PRO 130 130 130 PRO PRO A . n C 3 131 LEU 131 131 131 LEU LEU A . n C 3 132 ALA 132 132 132 ALA ALA A . n C 3 133 GLU 133 133 133 GLU GLU A . n C 3 134 LEU 134 134 134 LEU LEU A . n C 3 135 GLY 135 135 135 GLY GLY A . n C 3 136 PRO 136 136 136 PRO PRO A . n C 3 137 GLU 137 137 137 GLU GLU A . n C 3 138 PRO 138 138 138 PRO PRO A . n C 3 139 LEU 139 139 139 LEU LEU A . n C 3 140 SER 140 140 140 SER SER A . n C 3 141 PRO 141 141 141 PRO PRO A . n C 3 142 ALA 142 142 142 ALA ALA A . n C 3 143 PHE 143 143 143 PHE PHE A . n C 3 144 SER 144 144 144 SER SER A . n C 3 145 PRO 145 145 145 PRO PRO A . n C 3 146 ALA 146 146 146 ALA ALA A . n C 3 147 VAL 147 147 147 VAL VAL A . n C 3 148 LEU 148 148 148 LEU LEU A . n C 3 149 ALA 149 149 149 ALA ALA A . n C 3 150 GLU 150 150 150 GLU GLU A . n C 3 151 ARG 151 151 151 ARG ARG A . n C 3 152 ALA 152 152 152 ALA ALA A . n C 3 153 VAL 153 153 153 VAL VAL A . n C 3 154 LYS 154 154 154 LYS LYS A . n C 3 155 THR 155 155 155 THR THR A . n C 3 156 LYS 156 156 156 LYS LYS A . n C 3 157 ARG 157 157 157 ARG ARG A . n C 3 158 SER 158 158 158 SER SER A . n C 3 159 VAL 159 159 159 VAL VAL A . n C 3 160 LYS 160 160 160 LYS LYS A . n C 3 161 ALA 161 161 161 ALA ALA A . n C 3 162 LEU 162 162 162 LEU LEU A . n C 3 163 LEU 163 163 163 LEU LEU A . n C 3 164 LEU 164 164 164 LEU LEU A . n C 3 165 ASP 165 165 165 ASP ASP A . n C 3 166 GLN 166 166 166 GLN GLN A . n C 3 167 THR 167 167 167 THR THR A . n C 3 168 VAL 168 168 168 VAL VAL A . n C 3 169 VAL 169 169 169 VAL VAL A . n C 3 170 ALA 170 170 170 ALA ALA A . n C 3 171 GLY 171 171 171 GLY GLY A . n C 3 172 PHE 172 172 172 PHE PHE A . n C 3 173 GLY 173 173 173 GLY GLY A . n C 3 174 ASN 174 174 174 ASN ASN A . n C 3 175 ILE 175 175 175 ILE ILE A . n C 3 176 TYR 176 176 176 TYR TYR A . n C 3 177 VAL 177 177 177 VAL VAL A . n C 3 178 ASP 178 178 178 ASP ASP A . n C 3 179 GLU 179 179 179 GLU GLU A . n C 3 180 SER 180 180 180 SER SER A . n C 3 181 LEU 181 181 181 LEU LEU A . n C 3 182 PHE 182 182 182 PHE PHE A . n C 3 183 ARG 183 183 183 ARG ARG A . n C 3 184 ALA 184 184 184 ALA ALA A . n C 3 185 GLY 185 185 185 GLY GLY A . n C 3 186 ILE 186 186 186 ILE ILE A . n C 3 187 LEU 187 187 187 LEU LEU A . n C 3 188 PRO 188 188 188 PRO PRO A . n C 3 189 GLY 189 189 189 GLY GLY A . n C 3 190 ARG 190 190 190 ARG ARG A . n C 3 191 PRO 191 191 191 PRO PRO A . n C 3 192 ALA 192 192 192 ALA ALA A . n C 3 193 ALA 193 193 193 ALA ALA A . n C 3 194 SER 194 194 194 SER SER A . n C 3 195 LEU 195 195 195 LEU LEU A . n C 3 196 SER 196 196 196 SER SER A . n C 3 197 SER 197 197 197 SER SER A . n C 3 198 LYS 198 198 198 LYS LYS A . n C 3 199 GLU 199 199 199 GLU GLU A . n C 3 200 ILE 200 200 200 ILE ILE A . n C 3 201 GLU 201 201 201 GLU GLU A . n C 3 202 ARG 202 202 202 ARG ARG A . n C 3 203 LEU 203 203 203 LEU LEU A . n C 3 204 HIS 204 204 204 HIS HIS A . n C 3 205 GLU 205 205 205 GLU GLU A . n C 3 206 GLU 206 206 206 GLU GLU A . n C 3 207 MET 207 207 207 MET MET A . n C 3 208 VAL 208 208 208 VAL VAL A . n C 3 209 ALA 209 209 209 ALA ALA A . n C 3 210 THR 210 210 210 THR THR A . n C 3 211 ILE 211 211 211 ILE ILE A . n C 3 212 GLY 212 212 212 GLY GLY A . n C 3 213 GLU 213 213 213 GLU GLU A . n C 3 214 ALA 214 214 214 ALA ALA A . n C 3 215 VAL 215 215 215 VAL VAL A . n C 3 216 MET 216 216 216 MET MET A . n C 3 217 LYS 217 217 217 LYS LYS A . n C 3 218 GLY 218 218 218 GLY GLY A . n C 3 219 GLY 219 219 219 GLY GLY A . n C 3 220 SER 220 220 220 SER SER A . n C 3 221 THR 221 221 221 THR THR A . n C 3 222 VAL 222 222 222 VAL VAL A . n C 3 223 ARG 223 223 223 ARG ARG A . n C 3 224 THR 224 224 224 THR THR A . n C 3 225 TYR 225 225 225 TYR TYR A . n C 3 226 VAL 226 226 226 VAL VAL A . n C 3 227 ASN 227 227 227 ASN ASN A . n C 3 228 THR 228 228 228 THR THR A . n C 3 229 GLN 229 229 229 GLN GLN A . n C 3 230 GLY 230 230 230 GLY GLY A . n C 3 231 GLU 231 231 231 GLU GLU A . n C 3 232 ALA 232 232 232 ALA ALA A . n C 3 233 GLY 233 233 233 GLY GLY A . n C 3 234 THR 234 234 234 THR THR A . n C 3 235 PHE 235 235 235 PHE PHE A . n C 3 236 GLN 236 236 236 GLN GLN A . n C 3 237 HIS 237 237 237 HIS HIS A . n C 3 238 HIS 238 238 238 HIS HIS A . n C 3 239 LEU 239 239 239 LEU LEU A . n C 3 240 TYR 240 240 240 TYR TYR A . n C 3 241 VAL 241 241 241 VAL VAL A . n C 3 242 TYR 242 242 242 TYR TYR A . n C 3 243 GLY 243 243 243 GLY GLY A . n C 3 244 ARG 244 244 244 ARG ARG A . n C 3 245 GLN 245 245 245 GLN GLN A . n C 3 246 GLY 246 246 246 GLY GLY A . n C 3 247 ASN 247 247 247 ASN ASN A . n C 3 248 PRO 248 248 248 PRO PRO A . n C 3 249 CYS 249 249 249 CYS CYS A . n C 3 250 LYS 250 250 250 LYS LYS A . n C 3 251 ARG 251 251 251 ARG ARG A . n C 3 252 CYS 252 252 252 CYS CYS A . n C 3 253 GLY 253 253 253 GLY GLY A . n C 3 254 THR 254 254 254 THR THR A . n C 3 255 PRO 255 255 255 PRO PRO A . n C 3 256 ILE 256 256 256 ILE ILE A . n C 3 257 GLU 257 257 257 GLU GLU A . n C 3 258 LYS 258 258 258 LYS LYS A . n C 3 259 THR 259 259 259 THR THR A . n C 3 260 VAL 260 260 260 VAL VAL A . n C 3 261 VAL 261 261 261 VAL VAL A . n C 3 262 ALA 262 262 262 ALA ALA A . n C 3 263 GLY 263 263 263 GLY GLY A . n C 3 264 ARG 264 264 264 ARG ARG A . n C 3 265 GLY 265 265 265 GLY GLY A . n C 3 266 THR 266 266 266 THR THR A . n C 3 267 HIS 267 267 267 HIS HIS A . n C 3 268 TYR 268 268 268 TYR TYR A . n C 3 269 CYS 269 269 269 CYS CYS A . n C 3 270 PRO 270 270 270 PRO PRO A . n C 3 271 ARG 271 271 271 ARG ARG A . n C 3 272 CYS 272 272 272 CYS CYS A . n C 3 273 GLN 273 273 273 GLN GLN A . n C 3 274 ARG 274 274 274 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 300 300 ZN ZN A . E 5 HOH 1 63 63 HOH HOH B . E 5 HOH 2 68 68 HOH HOH B . E 5 HOH 3 76 76 HOH HOH B . E 5 HOH 4 122 122 HOH HOH B . E 5 HOH 5 134 134 HOH HOH B . F 5 HOH 1 25 15 HOH HOH C . F 5 HOH 2 26 38 HOH HOH C . F 5 HOH 3 27 45 HOH HOH C . F 5 HOH 4 28 48 HOH HOH C . F 5 HOH 5 29 103 HOH HOH C . F 5 HOH 6 30 104 HOH HOH C . F 5 HOH 7 31 106 HOH HOH C . F 5 HOH 8 32 107 HOH HOH C . F 5 HOH 9 33 121 HOH HOH C . G 5 HOH 1 301 1 HOH HOH A . G 5 HOH 2 302 2 HOH HOH A . G 5 HOH 3 303 3 HOH HOH A . G 5 HOH 4 304 4 HOH HOH A . G 5 HOH 5 305 5 HOH HOH A . G 5 HOH 6 306 6 HOH HOH A . G 5 HOH 7 307 7 HOH HOH A . G 5 HOH 8 308 8 HOH HOH A . G 5 HOH 9 309 9 HOH HOH A . G 5 HOH 10 310 10 HOH HOH A . G 5 HOH 11 311 11 HOH HOH A . G 5 HOH 12 312 12 HOH HOH A . G 5 HOH 13 313 13 HOH HOH A . G 5 HOH 14 314 14 HOH HOH A . G 5 HOH 15 315 16 HOH HOH A . G 5 HOH 16 316 17 HOH HOH A . G 5 HOH 17 317 18 HOH HOH A . G 5 HOH 18 318 19 HOH HOH A . G 5 HOH 19 319 20 HOH HOH A . G 5 HOH 20 320 21 HOH HOH A . G 5 HOH 21 321 22 HOH HOH A . G 5 HOH 22 322 23 HOH HOH A . G 5 HOH 23 323 24 HOH HOH A . G 5 HOH 24 324 25 HOH HOH A . G 5 HOH 25 325 26 HOH HOH A . G 5 HOH 26 326 27 HOH HOH A . G 5 HOH 27 327 28 HOH HOH A . G 5 HOH 28 328 29 HOH HOH A . G 5 HOH 29 329 30 HOH HOH A . G 5 HOH 30 330 31 HOH HOH A . G 5 HOH 31 331 32 HOH HOH A . G 5 HOH 32 332 33 HOH HOH A . G 5 HOH 33 333 34 HOH HOH A . G 5 HOH 34 334 35 HOH HOH A . G 5 HOH 35 335 36 HOH HOH A . G 5 HOH 36 336 37 HOH HOH A . G 5 HOH 37 337 39 HOH HOH A . G 5 HOH 38 338 40 HOH HOH A . G 5 HOH 39 339 41 HOH HOH A . G 5 HOH 40 340 42 HOH HOH A . G 5 HOH 41 341 43 HOH HOH A . G 5 HOH 42 342 44 HOH HOH A . G 5 HOH 43 343 46 HOH HOH A . G 5 HOH 44 344 47 HOH HOH A . G 5 HOH 45 345 49 HOH HOH A . G 5 HOH 46 346 50 HOH HOH A . G 5 HOH 47 347 51 HOH HOH A . G 5 HOH 48 348 52 HOH HOH A . G 5 HOH 49 349 53 HOH HOH A . G 5 HOH 50 350 54 HOH HOH A . G 5 HOH 51 351 55 HOH HOH A . G 5 HOH 52 352 56 HOH HOH A . G 5 HOH 53 353 57 HOH HOH A . G 5 HOH 54 354 58 HOH HOH A . G 5 HOH 55 355 59 HOH HOH A . G 5 HOH 56 356 60 HOH HOH A . G 5 HOH 57 357 61 HOH HOH A . G 5 HOH 58 358 62 HOH HOH A . G 5 HOH 59 359 64 HOH HOH A . G 5 HOH 60 360 65 HOH HOH A . G 5 HOH 61 361 66 HOH HOH A . G 5 HOH 62 362 67 HOH HOH A . G 5 HOH 63 363 69 HOH HOH A . G 5 HOH 64 364 70 HOH HOH A . G 5 HOH 65 365 71 HOH HOH A . G 5 HOH 66 366 72 HOH HOH A . G 5 HOH 67 367 73 HOH HOH A . G 5 HOH 68 368 74 HOH HOH A . G 5 HOH 69 369 75 HOH HOH A . G 5 HOH 70 370 77 HOH HOH A . G 5 HOH 71 371 78 HOH HOH A . G 5 HOH 72 372 79 HOH HOH A . G 5 HOH 73 373 80 HOH HOH A . G 5 HOH 74 374 81 HOH HOH A . G 5 HOH 75 375 82 HOH HOH A . G 5 HOH 76 376 83 HOH HOH A . G 5 HOH 77 377 84 HOH HOH A . G 5 HOH 78 378 85 HOH HOH A . G 5 HOH 79 379 86 HOH HOH A . G 5 HOH 80 380 87 HOH HOH A . G 5 HOH 81 381 88 HOH HOH A . G 5 HOH 82 382 89 HOH HOH A . G 5 HOH 83 383 90 HOH HOH A . G 5 HOH 84 384 91 HOH HOH A . G 5 HOH 85 385 92 HOH HOH A . G 5 HOH 86 386 93 HOH HOH A . G 5 HOH 87 387 94 HOH HOH A . G 5 HOH 88 388 95 HOH HOH A . G 5 HOH 89 389 96 HOH HOH A . G 5 HOH 90 390 97 HOH HOH A . G 5 HOH 91 391 98 HOH HOH A . G 5 HOH 92 392 99 HOH HOH A . G 5 HOH 93 393 100 HOH HOH A . G 5 HOH 94 394 101 HOH HOH A . G 5 HOH 95 395 102 HOH HOH A . G 5 HOH 96 396 105 HOH HOH A . G 5 HOH 97 397 108 HOH HOH A . G 5 HOH 98 398 109 HOH HOH A . G 5 HOH 99 399 110 HOH HOH A . G 5 HOH 100 400 111 HOH HOH A . G 5 HOH 101 401 112 HOH HOH A . G 5 HOH 102 402 113 HOH HOH A . G 5 HOH 103 403 114 HOH HOH A . G 5 HOH 104 404 115 HOH HOH A . G 5 HOH 105 405 116 HOH HOH A . G 5 HOH 106 406 117 HOH HOH A . G 5 HOH 107 407 118 HOH HOH A . G 5 HOH 108 408 119 HOH HOH A . G 5 HOH 109 409 120 HOH HOH A . G 5 HOH 110 410 123 HOH HOH A . G 5 HOH 111 411 124 HOH HOH A . G 5 HOH 112 412 125 HOH HOH A . G 5 HOH 113 413 126 HOH HOH A . G 5 HOH 114 414 127 HOH HOH A . G 5 HOH 115 415 128 HOH HOH A . G 5 HOH 116 416 129 HOH HOH A . G 5 HOH 117 417 130 HOH HOH A . G 5 HOH 118 418 131 HOH HOH A . G 5 HOH 119 419 132 HOH HOH A . G 5 HOH 120 420 133 HOH HOH A . G 5 HOH 121 421 135 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 18 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 249 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 252 ? A CYS 252 ? 1_555 107.3 ? 2 SG ? C CYS 249 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 269 ? A CYS 269 ? 1_555 112.0 ? 3 SG ? C CYS 252 ? A CYS 252 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 269 ? A CYS 269 ? 1_555 97.4 ? 4 SG ? C CYS 249 ? A CYS 249 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 272 ? A CYS 272 ? 1_555 108.9 ? 5 SG ? C CYS 252 ? A CYS 252 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 272 ? A CYS 272 ? 1_555 113.3 ? 6 SG ? C CYS 269 ? A CYS 269 ? 1_555 ZN ? D ZN . ? A ZN 300 ? 1_555 SG ? C CYS 272 ? A CYS 272 ? 1_555 117.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-10-14 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.value' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE The sequence of this protein is not available in any reference sequence database. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 66 ? ? -101.11 -137.07 2 1 ASP A 67 ? ? -90.38 -73.23 3 1 ARG A 76 ? ? 55.93 -130.88 4 1 ASP A 110 ? ? -160.12 90.23 5 1 VAL A 153 ? ? -76.46 41.27 6 1 LYS A 154 ? ? -148.32 -1.27 7 1 ARG A 223 ? ? -132.11 -68.24 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DA _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 17 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.061 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 91 ? CG ? C GLU 91 CG 2 1 Y 1 A GLU 91 ? CD ? C GLU 91 CD 3 1 Y 1 A GLU 91 ? OE1 ? C GLU 91 OE1 4 1 Y 1 A GLU 91 ? OE2 ? C GLU 91 OE2 5 1 Y 1 A GLU 133 ? CD ? C GLU 133 CD 6 1 Y 1 A GLU 133 ? OE1 ? C GLU 133 OE1 7 1 Y 1 A GLU 133 ? OE2 ? C GLU 133 OE2 8 1 Y 1 A GLU 150 ? CG ? C GLU 150 CG 9 1 Y 1 A GLU 150 ? CD ? C GLU 150 CD 10 1 Y 1 A GLU 150 ? OE1 ? C GLU 150 OE1 11 1 Y 1 A GLU 150 ? OE2 ? C GLU 150 OE2 12 1 Y 1 A LYS 154 ? CD ? C LYS 154 CD 13 1 Y 1 A LYS 154 ? CE ? C LYS 154 CE 14 1 Y 1 A LYS 154 ? NZ ? C LYS 154 NZ 15 1 Y 1 A LYS 156 ? CD ? C LYS 156 CD 16 1 Y 1 A LYS 156 ? CE ? C LYS 156 CE 17 1 Y 1 A LYS 156 ? NZ ? C LYS 156 NZ 18 1 Y 1 A SER 197 ? OG ? C SER 197 OG 19 1 Y 1 A LYS 198 ? CD ? C LYS 198 CD 20 1 Y 1 A LYS 198 ? CE ? C LYS 198 CE 21 1 Y 1 A LYS 198 ? NZ ? C LYS 198 NZ 22 1 Y 1 A GLU 201 ? CG ? C GLU 201 CG 23 1 Y 1 A GLU 201 ? CD ? C GLU 201 CD 24 1 Y 1 A GLU 201 ? OE1 ? C GLU 201 OE1 25 1 Y 1 A GLU 201 ? OE2 ? C GLU 201 OE2 26 1 Y 1 A GLU 205 ? CD ? C GLU 205 CD 27 1 Y 1 A GLU 205 ? OE1 ? C GLU 205 OE1 28 1 Y 1 A GLU 205 ? OE2 ? C GLU 205 OE2 29 1 Y 1 A LYS 217 ? CD ? C LYS 217 CD 30 1 Y 1 A LYS 217 ? CE ? C LYS 217 CE 31 1 Y 1 A LYS 217 ? NZ ? C LYS 217 NZ 32 1 Y 1 A ARG 251 ? CD ? C ARG 251 CD 33 1 Y 1 A ARG 251 ? NE ? C ARG 251 NE 34 1 Y 1 A ARG 251 ? CZ ? C ARG 251 CZ 35 1 Y 1 A ARG 251 ? NH1 ? C ARG 251 NH1 36 1 Y 1 A ARG 251 ? NH2 ? C ARG 251 NH2 37 1 Y 1 A ARG 274 ? CG ? C ARG 274 CG 38 1 Y 1 A ARG 274 ? CD ? C ARG 274 CD 39 1 Y 1 A ARG 274 ? NE ? C ARG 274 NE 40 1 Y 1 A ARG 274 ? CZ ? C ARG 274 CZ 41 1 Y 1 A ARG 274 ? NH1 ? C ARG 274 NH1 42 1 Y 1 A ARG 274 ? NH2 ? C ARG 274 NH2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 DA OP3 O N N 126 DA P P N N 127 DA OP1 O N N 128 DA OP2 O N N 129 DA "O5'" O N N 130 DA "C5'" C N N 131 DA "C4'" C N R 132 DA "O4'" O N N 133 DA "C3'" C N S 134 DA "O3'" O N N 135 DA "C2'" C N N 136 DA "C1'" C N R 137 DA N9 N Y N 138 DA C8 C Y N 139 DA N7 N Y N 140 DA C5 C Y N 141 DA C6 C Y N 142 DA N6 N N N 143 DA N1 N Y N 144 DA C2 C Y N 145 DA N3 N Y N 146 DA C4 C Y N 147 DA HOP3 H N N 148 DA HOP2 H N N 149 DA "H5'" H N N 150 DA "H5''" H N N 151 DA "H4'" H N N 152 DA "H3'" H N N 153 DA "HO3'" H N N 154 DA "H2'" H N N 155 DA "H2''" H N N 156 DA "H1'" H N N 157 DA H8 H N N 158 DA H61 H N N 159 DA H62 H N N 160 DA H2 H N N 161 DC OP3 O N N 162 DC P P N N 163 DC OP1 O N N 164 DC OP2 O N N 165 DC "O5'" O N N 166 DC "C5'" C N N 167 DC "C4'" C N R 168 DC "O4'" O N N 169 DC "C3'" C N S 170 DC "O3'" O N N 171 DC "C2'" C N N 172 DC "C1'" C N R 173 DC N1 N N N 174 DC C2 C N N 175 DC O2 O N N 176 DC N3 N N N 177 DC C4 C N N 178 DC N4 N N N 179 DC C5 C N N 180 DC C6 C N N 181 DC HOP3 H N N 182 DC HOP2 H N N 183 DC "H5'" H N N 184 DC "H5''" H N N 185 DC "H4'" H N N 186 DC "H3'" H N N 187 DC "HO3'" H N N 188 DC "H2'" H N N 189 DC "H2''" H N N 190 DC "H1'" H N N 191 DC H41 H N N 192 DC H42 H N N 193 DC H5 H N N 194 DC H6 H N N 195 DG OP3 O N N 196 DG P P N N 197 DG OP1 O N N 198 DG OP2 O N N 199 DG "O5'" O N N 200 DG "C5'" C N N 201 DG "C4'" C N R 202 DG "O4'" O N N 203 DG "C3'" C N S 204 DG "O3'" O N N 205 DG "C2'" C N N 206 DG "C1'" C N R 207 DG N9 N Y N 208 DG C8 C Y N 209 DG N7 N Y N 210 DG C5 C Y N 211 DG C6 C N N 212 DG O6 O N N 213 DG N1 N N N 214 DG C2 C N N 215 DG N2 N N N 216 DG N3 N N N 217 DG C4 C Y N 218 DG HOP3 H N N 219 DG HOP2 H N N 220 DG "H5'" H N N 221 DG "H5''" H N N 222 DG "H4'" H N N 223 DG "H3'" H N N 224 DG "HO3'" H N N 225 DG "H2'" H N N 226 DG "H2''" H N N 227 DG "H1'" H N N 228 DG H8 H N N 229 DG H1 H N N 230 DG H21 H N N 231 DG H22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 HIS N N N N 318 HIS CA C N S 319 HIS C C N N 320 HIS O O N N 321 HIS CB C N N 322 HIS CG C Y N 323 HIS ND1 N Y N 324 HIS CD2 C Y N 325 HIS CE1 C Y N 326 HIS NE2 N Y N 327 HIS OXT O N N 328 HIS H H N N 329 HIS H2 H N N 330 HIS HA H N N 331 HIS HB2 H N N 332 HIS HB3 H N N 333 HIS HD1 H N N 334 HIS HD2 H N N 335 HIS HE1 H N N 336 HIS HE2 H N N 337 HIS HXT H N N 338 HOH O O N N 339 HOH H1 H N N 340 HOH H2 H N N 341 ILE N N N N 342 ILE CA C N S 343 ILE C C N N 344 ILE O O N N 345 ILE CB C N S 346 ILE CG1 C N N 347 ILE CG2 C N N 348 ILE CD1 C N N 349 ILE OXT O N N 350 ILE H H N N 351 ILE H2 H N N 352 ILE HA H N N 353 ILE HB H N N 354 ILE HG12 H N N 355 ILE HG13 H N N 356 ILE HG21 H N N 357 ILE HG22 H N N 358 ILE HG23 H N N 359 ILE HD11 H N N 360 ILE HD12 H N N 361 ILE HD13 H N N 362 ILE HXT H N N 363 LEU N N N N 364 LEU CA C N S 365 LEU C C N N 366 LEU O O N N 367 LEU CB C N N 368 LEU CG C N N 369 LEU CD1 C N N 370 LEU CD2 C N N 371 LEU OXT O N N 372 LEU H H N N 373 LEU H2 H N N 374 LEU HA H N N 375 LEU HB2 H N N 376 LEU HB3 H N N 377 LEU HG H N N 378 LEU HD11 H N N 379 LEU HD12 H N N 380 LEU HD13 H N N 381 LEU HD21 H N N 382 LEU HD22 H N N 383 LEU HD23 H N N 384 LEU HXT H N N 385 LYS N N N N 386 LYS CA C N S 387 LYS C C N N 388 LYS O O N N 389 LYS CB C N N 390 LYS CG C N N 391 LYS CD C N N 392 LYS CE C N N 393 LYS NZ N N N 394 LYS OXT O N N 395 LYS H H N N 396 LYS H2 H N N 397 LYS HA H N N 398 LYS HB2 H N N 399 LYS HB3 H N N 400 LYS HG2 H N N 401 LYS HG3 H N N 402 LYS HD2 H N N 403 LYS HD3 H N N 404 LYS HE2 H N N 405 LYS HE3 H N N 406 LYS HZ1 H N N 407 LYS HZ2 H N N 408 LYS HZ3 H N N 409 LYS HXT H N N 410 MET N N N N 411 MET CA C N S 412 MET C C N N 413 MET O O N N 414 MET CB C N N 415 MET CG C N N 416 MET SD S N N 417 MET CE C N N 418 MET OXT O N N 419 MET H H N N 420 MET H2 H N N 421 MET HA H N N 422 MET HB2 H N N 423 MET HB3 H N N 424 MET HG2 H N N 425 MET HG3 H N N 426 MET HE1 H N N 427 MET HE2 H N N 428 MET HE3 H N N 429 MET HXT H N N 430 PHE N N N N 431 PHE CA C N S 432 PHE C C N N 433 PHE O O N N 434 PHE CB C N N 435 PHE CG C Y N 436 PHE CD1 C Y N 437 PHE CD2 C Y N 438 PHE CE1 C Y N 439 PHE CE2 C Y N 440 PHE CZ C Y N 441 PHE OXT O N N 442 PHE H H N N 443 PHE H2 H N N 444 PHE HA H N N 445 PHE HB2 H N N 446 PHE HB3 H N N 447 PHE HD1 H N N 448 PHE HD2 H N N 449 PHE HE1 H N N 450 PHE HE2 H N N 451 PHE HZ H N N 452 PHE HXT H N N 453 PRO N N N N 454 PRO CA C N S 455 PRO C C N N 456 PRO O O N N 457 PRO CB C N N 458 PRO CG C N N 459 PRO CD C N N 460 PRO OXT O N N 461 PRO H H N N 462 PRO HA H N N 463 PRO HB2 H N N 464 PRO HB3 H N N 465 PRO HG2 H N N 466 PRO HG3 H N N 467 PRO HD2 H N N 468 PRO HD3 H N N 469 PRO HXT H N N 470 SER N N N N 471 SER CA C N S 472 SER C C N N 473 SER O O N N 474 SER CB C N N 475 SER OG O N N 476 SER OXT O N N 477 SER H H N N 478 SER H2 H N N 479 SER HA H N N 480 SER HB2 H N N 481 SER HB3 H N N 482 SER HG H N N 483 SER HXT H N N 484 THR N N N N 485 THR CA C N S 486 THR C C N N 487 THR O O N N 488 THR CB C N R 489 THR OG1 O N N 490 THR CG2 C N N 491 THR OXT O N N 492 THR H H N N 493 THR H2 H N N 494 THR HA H N N 495 THR HB H N N 496 THR HG1 H N N 497 THR HG21 H N N 498 THR HG22 H N N 499 THR HG23 H N N 500 THR HXT H N N 501 TRP N N N N 502 TRP CA C N S 503 TRP C C N N 504 TRP O O N N 505 TRP CB C N N 506 TRP CG C Y N 507 TRP CD1 C Y N 508 TRP CD2 C Y N 509 TRP NE1 N Y N 510 TRP CE2 C Y N 511 TRP CE3 C Y N 512 TRP CZ2 C Y N 513 TRP CZ3 C Y N 514 TRP CH2 C Y N 515 TRP OXT O N N 516 TRP H H N N 517 TRP H2 H N N 518 TRP HA H N N 519 TRP HB2 H N N 520 TRP HB3 H N N 521 TRP HD1 H N N 522 TRP HE1 H N N 523 TRP HE3 H N N 524 TRP HZ2 H N N 525 TRP HZ3 H N N 526 TRP HH2 H N N 527 TRP HXT H N N 528 TYR N N N N 529 TYR CA C N S 530 TYR C C N N 531 TYR O O N N 532 TYR CB C N N 533 TYR CG C Y N 534 TYR CD1 C Y N 535 TYR CD2 C Y N 536 TYR CE1 C Y N 537 TYR CE2 C Y N 538 TYR CZ C Y N 539 TYR OH O N N 540 TYR OXT O N N 541 TYR H H N N 542 TYR H2 H N N 543 TYR HA H N N 544 TYR HB2 H N N 545 TYR HB3 H N N 546 TYR HD1 H N N 547 TYR HD2 H N N 548 TYR HE1 H N N 549 TYR HE2 H N N 550 TYR HH H N N 551 TYR HXT H N N 552 VAL N N N N 553 VAL CA C N S 554 VAL C C N N 555 VAL O O N N 556 VAL CB C N N 557 VAL CG1 C N N 558 VAL CG2 C N N 559 VAL OXT O N N 560 VAL H H N N 561 VAL H2 H N N 562 VAL HA H N N 563 VAL HB H N N 564 VAL HG11 H N N 565 VAL HG12 H N N 566 VAL HG13 H N N 567 VAL HG21 H N N 568 VAL HG22 H N N 569 VAL HG23 H N N 570 VAL HXT H N N 571 ZN ZN ZN N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 SER N CA sing N N 466 SER N H sing N N 467 SER N H2 sing N N 468 SER CA C sing N N 469 SER CA CB sing N N 470 SER CA HA sing N N 471 SER C O doub N N 472 SER C OXT sing N N 473 SER CB OG sing N N 474 SER CB HB2 sing N N 475 SER CB HB3 sing N N 476 SER OG HG sing N N 477 SER OXT HXT sing N N 478 THR N CA sing N N 479 THR N H sing N N 480 THR N H2 sing N N 481 THR CA C sing N N 482 THR CA CB sing N N 483 THR CA HA sing N N 484 THR C O doub N N 485 THR C OXT sing N N 486 THR CB OG1 sing N N 487 THR CB CG2 sing N N 488 THR CB HB sing N N 489 THR OG1 HG1 sing N N 490 THR CG2 HG21 sing N N 491 THR CG2 HG22 sing N N 492 THR CG2 HG23 sing N N 493 THR OXT HXT sing N N 494 TRP N CA sing N N 495 TRP N H sing N N 496 TRP N H2 sing N N 497 TRP CA C sing N N 498 TRP CA CB sing N N 499 TRP CA HA sing N N 500 TRP C O doub N N 501 TRP C OXT sing N N 502 TRP CB CG sing N N 503 TRP CB HB2 sing N N 504 TRP CB HB3 sing N N 505 TRP CG CD1 doub Y N 506 TRP CG CD2 sing Y N 507 TRP CD1 NE1 sing Y N 508 TRP CD1 HD1 sing N N 509 TRP CD2 CE2 doub Y N 510 TRP CD2 CE3 sing Y N 511 TRP NE1 CE2 sing Y N 512 TRP NE1 HE1 sing N N 513 TRP CE2 CZ2 sing Y N 514 TRP CE3 CZ3 doub Y N 515 TRP CE3 HE3 sing N N 516 TRP CZ2 CH2 doub Y N 517 TRP CZ2 HZ2 sing N N 518 TRP CZ3 CH2 sing Y N 519 TRP CZ3 HZ3 sing N N 520 TRP CH2 HH2 sing N N 521 TRP OXT HXT sing N N 522 TYR N CA sing N N 523 TYR N H sing N N 524 TYR N H2 sing N N 525 TYR CA C sing N N 526 TYR CA CB sing N N 527 TYR CA HA sing N N 528 TYR C O doub N N 529 TYR C OXT sing N N 530 TYR CB CG sing N N 531 TYR CB HB2 sing N N 532 TYR CB HB3 sing N N 533 TYR CG CD1 doub Y N 534 TYR CG CD2 sing Y N 535 TYR CD1 CE1 sing Y N 536 TYR CD1 HD1 sing N N 537 TYR CD2 CE2 doub Y N 538 TYR CD2 HD2 sing N N 539 TYR CE1 CZ doub Y N 540 TYR CE1 HE1 sing N N 541 TYR CE2 CZ sing Y N 542 TYR CE2 HE2 sing N N 543 TYR CZ OH sing N N 544 TYR OH HH sing N N 545 TYR OXT HXT sing N N 546 VAL N CA sing N N 547 VAL N H sing N N 548 VAL N H2 sing N N 549 VAL CA C sing N N 550 VAL CA CB sing N N 551 VAL CA HA sing N N 552 VAL C O doub N N 553 VAL C OXT sing N N 554 VAL CB CG1 sing N N 555 VAL CB CG2 sing N N 556 VAL CB HB sing N N 557 VAL CG1 HG11 sing N N 558 VAL CG1 HG12 sing N N 559 VAL CG1 HG13 sing N N 560 VAL CG2 HG21 sing N N 561 VAL CG2 HG22 sing N N 562 VAL CG2 HG23 sing N N 563 VAL OXT HXT sing N N 564 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1R2Y 'b-form double helix' 1R2Y 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 12 1_555 -0.303 0.681 0.251 1.506 1.631 4.611 1 B_DG1:DC24_C B 1 ? C 24 ? ? ? 1 A DT 2 1_555 B DA 11 1_555 0.013 0.352 0.020 11.477 -10.598 16.240 2 B_DT2:DA23_C B 2 ? C 23 ? ? 1 1 A DA 3 1_555 B DT 10 1_555 -1.056 -0.190 0.114 7.428 -11.223 5.903 3 B_DA3:DT22_C B 3 ? C 22 ? 20 1 1 A DG 4 1_555 B DC 9 1_555 0.055 -0.259 -0.465 -3.796 -14.819 6.707 4 B_DG4:DC21_C B 4 ? C 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 0.158 -0.284 -0.215 -5.643 -2.505 -0.719 5 B_DA5:DT20_C B 5 ? C 20 ? 20 1 1 A DC 6 1_555 B DG 7 1_555 -0.073 0.053 -0.518 15.067 8.672 -5.203 6 B_DC6:DG19_C B 6 ? C 19 ? 19 1 1 A DT 8 1_555 B DA 5 1_555 -0.226 -0.113 0.006 -14.700 -3.011 -3.694 7 B_DT8:DA17_C B 8 ? C 17 ? 20 1 1 A DG 9 1_555 B DC 4 1_555 0.173 -0.203 -0.254 0.535 -2.332 -5.724 8 B_DG9:DC16_C B 9 ? C 16 ? 19 1 1 A DG 10 1_555 B DC 3 1_555 0.154 -0.168 -0.169 -0.028 -9.957 -0.308 9 B_DG10:DC15_C B 10 ? C 15 ? 19 1 1 A DA 11 1_555 B DT 2 1_555 0.455 -0.100 -0.227 1.741 -12.256 -4.948 10 B_DA11:DT14_C B 11 ? C 14 ? 20 1 1 A DC 12 1_555 B DG 1 1_555 1.039 -0.466 -0.377 9.470 -6.340 1.516 11 B_DC12:DG13_C B 12 ? C 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 12 1_555 A DT 2 1_555 B DA 11 1_555 0.960 0.196 3.003 4.316 7.279 37.431 -0.558 -0.954 3.074 11.168 -6.622 38.342 1 BB_DG1DT2:DA23DC24_CC B 1 ? C 24 ? B 2 ? C 23 ? 1 A DT 2 1_555 B DA 11 1_555 A DA 3 1_555 B DT 10 1_555 -0.501 1.536 3.384 -1.341 -2.873 39.567 2.604 0.578 3.283 -4.236 1.977 39.689 2 BB_DT2DA3:DT22DA23_CC B 2 ? C 23 ? B 3 ? C 22 ? 1 A DA 3 1_555 B DT 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.123 -0.081 3.716 3.063 6.142 41.023 -0.852 0.541 3.649 8.691 -4.333 41.569 3 BB_DA3DG4:DC21DT22_CC B 3 ? C 22 ? B 4 ? C 21 ? 1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 -0.043 -0.838 3.289 -1.041 3.820 34.145 -2.011 -0.088 3.179 6.478 1.766 34.367 4 BB_DG4DA5:DT20DC21_CC B 4 ? C 21 ? B 5 ? C 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DC 6 1_555 B DG 7 1_555 0.272 -0.076 2.909 3.628 4.642 20.714 -1.872 0.577 2.829 12.586 -9.836 21.527 5 BB_DA5DC6:DG19DT20_CC B 5 ? C 20 ? B 6 ? C 19 ? 1 A DT 8 1_555 B DA 5 1_555 A DG 9 1_555 B DC 4 1_555 -0.120 0.396 3.161 0.469 5.071 31.831 -0.168 0.297 3.183 9.173 -0.848 32.226 6 BB_DT8DG9:DC16DA17_CC B 8 ? C 17 ? B 9 ? C 16 ? 1 A DG 9 1_555 B DC 4 1_555 A DG 10 1_555 B DC 3 1_555 -0.174 -0.423 3.305 -2.006 6.911 34.002 -1.765 -0.015 3.166 11.656 3.383 34.733 7 BB_DG9DG10:DC15DC16_CC B 9 ? C 16 ? B 10 ? C 15 ? 1 A DG 10 1_555 B DC 3 1_555 A DA 11 1_555 B DT 2 1_555 -0.642 -0.016 3.218 -2.029 3.450 37.884 -0.457 0.730 3.233 5.295 3.115 38.087 8 BB_DG10DA11:DT14DC15_CC B 10 ? C 15 ? B 11 ? C 14 ? 1 A DA 11 1_555 B DT 2 1_555 A DC 12 1_555 B DG 1 1_555 0.268 -0.026 3.229 1.456 5.738 40.010 -0.674 -0.226 3.203 8.331 -2.114 40.428 9 BB_DA11DC12:DG13DT14_CC B 11 ? C 14 ? B 12 ? C 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1L1T _pdbx_initial_refinement_model.details ? #