HEADER OXIDOREDUCTASE 30-SEP-03 1R37 TITLE ALCOHOL DEHYDROGENASE FROM SULFOLOBUS SOLFATARICUS COMPLEXED WITH TITLE 2 NAD(H) AND 2-ETHOXYETHANOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: HOLO-ENZYME FORM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 GENE: ADH OR SSO2536; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: RB791; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTRC99A KEYWDS ARCHAEON, ZINC, NAD(H) DEPENDENT, HOLOFORM, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.ESPOSITO,I.BRUNO,F.SICA,C.A.RAIA,A.GIORDANO,M.ROSSI,L.MAZZARELLA, AUTHOR 2 A.ZAGARI REVDAT 3 25-OCT-23 1R37 1 REMARK LINK REVDAT 2 24-FEB-09 1R37 1 VERSN REVDAT 1 10-FEB-04 1R37 0 JRNL AUTH L.ESPOSITO,I.BRUNO,F.SICA,C.A.RAIA,A.GIORDANO,M.ROSSI, JRNL AUTH 2 L.MAZZARELLA,A.ZAGARI JRNL TITL CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF THE ALCOHOL JRNL TITL 2 DEHYDROGENASE FROM SULFOLOBUS SOLFATARICUS JRNL REF BIOCHEMISTRY V. 42 14397 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 14661950 JRNL DOI 10.1021/BI035271B REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.ESPOSITO,F.SICA,C.A.RAIA,A.GIORDANO,M.ROSSI,L.MAZZARELLA, REMARK 1 AUTH 2 A.ZAGARI REMARK 1 TITL CRYSTAL STRUCTURE OF THE ALCOHOL DEHYDROGENASE FROM THE REMARK 1 TITL 2 HYPERTHERMOPHILIC ARCHAEON SULFOLOBUS SOLFATARICUS AT 1.85 A REMARK 1 TITL 3 RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 318 463 2002 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 12051852 REMARK 1 DOI 10.1016/S0022-2836(02)00088-8 REMARK 1 REFERENCE 2 REMARK 1 AUTH L.ESPOSITO,I.BRUNO,F.SICA,C.A.RAIA,A.GIORDANO,M.ROSSI, REMARK 1 AUTH 2 L.MAZZARELLA,A.ZAGARI REMARK 1 TITL STRUCTURAL STUDY OF A SINGLE-POINT MUTANT OF SULFOLOBUS REMARK 1 TITL 2 SOLFATARICUS ALCOHOL DEHYDROGENASE WITH ENHANCED ACTIVITY REMARK 1 REF FEBS LETT. V. 539 14 2003 REMARK 1 REFN ISSN 0014-5793 REMARK 1 PMID 12650918 REMARK 1 DOI 10.1016/S0014-5793(03)00173-X REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 29131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1521 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1849 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 110 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5276 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.72000 REMARK 3 B22 (A**2) : -5.11000 REMARK 3 B33 (A**2) : 10.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.18000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.820 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.330 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.990 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.120 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.040 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 35.14 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THIS C2 CRYSTAL DISPLAYS NON-MEROHEDRAL REMARK 3 TWINNING. THE TWO RECIPROCAL LATTICES ARE RELATED BY A 180 REMARK 3 DEGREE ROTATION ABOUT THE A AXIS. SPOTS FROM THE DOMINANT REMARK 3 LATTICE (~70%) WERE INDEXED AND REDUCED; THIS DATASET WAS USED REMARK 3 FOR THE STRUCTURE REFINEMENT. REMARK 4 REMARK 4 1R37 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-03. REMARK 100 THE DEPOSITION ID IS D_1000020380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-02 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9393 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29287 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.07100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1JVB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40%(V/V) 2-ETHOXYETHANOL, 100MM NA/K REMARK 280 PHOSPHATE, 200MM NACL, 2MM NAD+(NADH), PH 6.2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.53200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.50700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.53200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.50700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TETRAMER GENERATED FROM THE REMARK 300 DIMER IN THE ASYMMETRIC UNIT BY THE OPERATION: -X+1, Y, -Z+1 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 123.33752 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 68.23796 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 154 -71.41 -146.51 REMARK 500 ASN A 248 -65.16 -129.07 REMARK 500 VAL A 256 -65.95 -127.62 REMARK 500 VAL A 296 -120.86 30.78 REMARK 500 ILE A 346 70.49 -119.81 REMARK 500 CYS B 154 -69.05 -145.30 REMARK 500 ASN B 248 -62.56 -130.76 REMARK 500 VAL B 256 -64.56 -128.82 REMARK 500 VAL B 296 -122.48 29.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 500 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 38 SG REMARK 620 2 HIS A 68 NE2 107.2 REMARK 620 3 CYS A 154 SG 128.2 111.4 REMARK 620 4 ETX A 600 O1 117.9 91.5 94.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 98 OE2 REMARK 620 2 CYS A 101 SG 100.8 REMARK 620 3 CYS A 104 SG 110.6 111.0 REMARK 620 4 CYS A 112 SG 108.6 115.7 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 500 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 38 SG REMARK 620 2 HIS B 68 NE2 110.1 REMARK 620 3 CYS B 154 SG 133.9 107.1 REMARK 620 4 ETX B 600 O1 111.4 90.9 94.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 98 OE2 REMARK 620 2 CYS B 101 SG 99.9 REMARK 620 3 CYS B 104 SG 113.1 112.8 REMARK 620 4 CYS B 112 SG 109.5 112.1 109.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ZNS REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES THAT BIND A STRUCTURAL ZINC ION (ZN A REMARK 800 400) IN THE CATALYTIC DOMAIN REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNC REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES THAT BIND THE CATALYTIC ZINC ION (ZN A REMARK 800 500) REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNT REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES THAT BIND A STRUCTURAL ZINC ION (ZN B REMARK 800 400) IN THE CATALYTIC DOMAIN REMARK 800 REMARK 800 SITE_IDENTIFIER: ZND REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES THAT BIND THE CATALYTIC ZINC ION (ZN B REMARK 800 500) REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ETX A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ETX B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JVB RELATED DB: PDB REMARK 900 SSADH APOFORM REMARK 900 RELATED ID: 1NTO RELATED DB: PDB REMARK 900 SSADH N249Y MUTANT- MONOCLINIC FORM REMARK 900 RELATED ID: 1NVG RELATED DB: PDB REMARK 900 SSADH N249Y MUTANT- TETRAGONAL FORM DBREF 1R37 A 1 347 UNP P39462 ADH_SULSO 1 347 DBREF 1R37 B 1 347 UNP P39462 ADH_SULSO 1 347 SEQRES 1 A 347 MET ARG ALA VAL ARG LEU VAL GLU ILE GLY LYS PRO LEU SEQRES 2 A 347 SER LEU GLN GLU ILE GLY VAL PRO LYS PRO LYS GLY PRO SEQRES 3 A 347 GLN VAL LEU ILE LYS VAL GLU ALA ALA GLY VAL CYS HIS SEQRES 4 A 347 SER ASP VAL HIS MET ARG GLN GLY ARG PHE GLY ASN LEU SEQRES 5 A 347 ARG ILE VAL GLU ASP LEU GLY VAL LYS LEU PRO VAL THR SEQRES 6 A 347 LEU GLY HIS GLU ILE ALA GLY LYS ILE GLU GLU VAL GLY SEQRES 7 A 347 ASP GLU VAL VAL GLY TYR SER LYS GLY ASP LEU VAL ALA SEQRES 8 A 347 VAL ASN PRO TRP GLN GLY GLU GLY ASN CYS TYR TYR CYS SEQRES 9 A 347 ARG ILE GLY GLU GLU HIS LEU CYS ASP SER PRO ARG TRP SEQRES 10 A 347 LEU GLY ILE ASN PHE ASP GLY ALA TYR ALA GLU TYR VAL SEQRES 11 A 347 ILE VAL PRO HIS TYR LYS TYR MET TYR LYS LEU ARG ARG SEQRES 12 A 347 LEU ASN ALA VAL GLU ALA ALA PRO LEU THR CYS SER GLY SEQRES 13 A 347 ILE THR THR TYR ARG ALA VAL ARG LYS ALA SER LEU ASP SEQRES 14 A 347 PRO THR LYS THR LEU LEU VAL VAL GLY ALA GLY GLY GLY SEQRES 15 A 347 LEU GLY THR MET ALA VAL GLN ILE ALA LYS ALA VAL SER SEQRES 16 A 347 GLY ALA THR ILE ILE GLY VAL ASP VAL ARG GLU GLU ALA SEQRES 17 A 347 VAL GLU ALA ALA LYS ARG ALA GLY ALA ASP TYR VAL ILE SEQRES 18 A 347 ASN ALA SER MET GLN ASP PRO LEU ALA GLU ILE ARG ARG SEQRES 19 A 347 ILE THR GLU SER LYS GLY VAL ASP ALA VAL ILE ASP LEU SEQRES 20 A 347 ASN ASN SER GLU LYS THR LEU SER VAL TYR PRO LYS ALA SEQRES 21 A 347 LEU ALA LYS GLN GLY LYS TYR VAL MET VAL GLY LEU PHE SEQRES 22 A 347 GLY ALA ASP LEU HIS TYR HIS ALA PRO LEU ILE THR LEU SEQRES 23 A 347 SER GLU ILE GLN PHE VAL GLY SER LEU VAL GLY ASN GLN SEQRES 24 A 347 SER ASP PHE LEU GLY ILE MET ARG LEU ALA GLU ALA GLY SEQRES 25 A 347 LYS VAL LYS PRO MET ILE THR LYS THR MET LYS LEU GLU SEQRES 26 A 347 GLU ALA ASN GLU ALA ILE ASP ASN LEU GLU ASN PHE LYS SEQRES 27 A 347 ALA ILE GLY ARG GLN VAL LEU ILE PRO SEQRES 1 B 347 MET ARG ALA VAL ARG LEU VAL GLU ILE GLY LYS PRO LEU SEQRES 2 B 347 SER LEU GLN GLU ILE GLY VAL PRO LYS PRO LYS GLY PRO SEQRES 3 B 347 GLN VAL LEU ILE LYS VAL GLU ALA ALA GLY VAL CYS HIS SEQRES 4 B 347 SER ASP VAL HIS MET ARG GLN GLY ARG PHE GLY ASN LEU SEQRES 5 B 347 ARG ILE VAL GLU ASP LEU GLY VAL LYS LEU PRO VAL THR SEQRES 6 B 347 LEU GLY HIS GLU ILE ALA GLY LYS ILE GLU GLU VAL GLY SEQRES 7 B 347 ASP GLU VAL VAL GLY TYR SER LYS GLY ASP LEU VAL ALA SEQRES 8 B 347 VAL ASN PRO TRP GLN GLY GLU GLY ASN CYS TYR TYR CYS SEQRES 9 B 347 ARG ILE GLY GLU GLU HIS LEU CYS ASP SER PRO ARG TRP SEQRES 10 B 347 LEU GLY ILE ASN PHE ASP GLY ALA TYR ALA GLU TYR VAL SEQRES 11 B 347 ILE VAL PRO HIS TYR LYS TYR MET TYR LYS LEU ARG ARG SEQRES 12 B 347 LEU ASN ALA VAL GLU ALA ALA PRO LEU THR CYS SER GLY SEQRES 13 B 347 ILE THR THR TYR ARG ALA VAL ARG LYS ALA SER LEU ASP SEQRES 14 B 347 PRO THR LYS THR LEU LEU VAL VAL GLY ALA GLY GLY GLY SEQRES 15 B 347 LEU GLY THR MET ALA VAL GLN ILE ALA LYS ALA VAL SER SEQRES 16 B 347 GLY ALA THR ILE ILE GLY VAL ASP VAL ARG GLU GLU ALA SEQRES 17 B 347 VAL GLU ALA ALA LYS ARG ALA GLY ALA ASP TYR VAL ILE SEQRES 18 B 347 ASN ALA SER MET GLN ASP PRO LEU ALA GLU ILE ARG ARG SEQRES 19 B 347 ILE THR GLU SER LYS GLY VAL ASP ALA VAL ILE ASP LEU SEQRES 20 B 347 ASN ASN SER GLU LYS THR LEU SER VAL TYR PRO LYS ALA SEQRES 21 B 347 LEU ALA LYS GLN GLY LYS TYR VAL MET VAL GLY LEU PHE SEQRES 22 B 347 GLY ALA ASP LEU HIS TYR HIS ALA PRO LEU ILE THR LEU SEQRES 23 B 347 SER GLU ILE GLN PHE VAL GLY SER LEU VAL GLY ASN GLN SEQRES 24 B 347 SER ASP PHE LEU GLY ILE MET ARG LEU ALA GLU ALA GLY SEQRES 25 B 347 LYS VAL LYS PRO MET ILE THR LYS THR MET LYS LEU GLU SEQRES 26 B 347 GLU ALA ASN GLU ALA ILE ASP ASN LEU GLU ASN PHE LYS SEQRES 27 B 347 ALA ILE GLY ARG GLN VAL LEU ILE PRO HET ZN A 500 1 HET ZN A 400 1 HET NAD A 403 44 HET ETX A 600 6 HET ZN B 500 1 HET ZN B 400 1 HET NAD B 403 44 HET ETX B 600 6 HETNAM ZN ZINC ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM ETX 2-ETHOXYETHANOL FORMUL 3 ZN 4(ZN 2+) FORMUL 5 NAD 2(C21 H27 N7 O14 P2) FORMUL 6 ETX 2(C4 H10 O2) FORMUL 11 HOH *204(H2 O) HELIX 1 1 HIS A 39 GLY A 47 1 9 HELIX 2 2 CYS A 101 ILE A 106 1 6 HELIX 3 3 GLU A 108 CYS A 112 5 5 HELIX 4 4 HIS A 134 LYS A 136 5 3 HELIX 5 5 ASN A 145 ALA A 150 1 6 HELIX 6 6 PRO A 151 THR A 153 5 3 HELIX 7 7 CYS A 154 ALA A 166 1 13 HELIX 8 8 GLY A 181 SER A 195 1 15 HELIX 9 9 ARG A 205 GLY A 216 1 12 HELIX 10 10 ASP A 227 THR A 236 1 10 HELIX 11 11 SER A 250 SER A 255 1 6 HELIX 12 12 VAL A 256 LYS A 259 5 4 HELIX 13 13 ALA A 281 GLU A 288 1 8 HELIX 14 14 ASN A 298 ALA A 311 1 14 HELIX 15 15 LYS A 323 GLU A 325 5 3 HELIX 16 16 GLU A 326 ASN A 336 1 11 HELIX 17 17 HIS B 39 GLY B 47 1 9 HELIX 18 18 CYS B 101 ILE B 106 1 6 HELIX 19 19 GLU B 108 CYS B 112 5 5 HELIX 20 20 HIS B 134 LYS B 136 5 3 HELIX 21 21 ASN B 145 ALA B 150 1 6 HELIX 22 22 PRO B 151 THR B 153 5 3 HELIX 23 23 CYS B 154 ALA B 166 1 13 HELIX 24 24 GLY B 181 SER B 195 1 15 HELIX 25 25 ARG B 205 ALA B 215 1 11 HELIX 26 26 ASP B 227 THR B 236 1 10 HELIX 27 27 SER B 250 SER B 255 1 6 HELIX 28 28 VAL B 256 LYS B 259 5 4 HELIX 29 29 ALA B 281 GLU B 288 1 8 HELIX 30 30 ASN B 298 ALA B 311 1 14 HELIX 31 31 LYS B 323 GLU B 325 5 3 HELIX 32 32 GLU B 326 ASN B 336 1 11 SHEET 1 A 3 SER A 14 GLU A 17 0 SHEET 2 A 3 ARG A 2 LEU A 6 -1 N ARG A 5 O SER A 14 SHEET 3 A 3 VAL A 64 THR A 65 -1 O VAL A 64 N LEU A 6 SHEET 1 B 5 TYR A 129 VAL A 132 0 SHEET 2 B 5 VAL A 28 VAL A 37 -1 N VAL A 28 O VAL A 132 SHEET 3 B 5 GLU A 69 VAL A 77 -1 O GLU A 76 N LEU A 29 SHEET 4 B 5 LEU A 89 VAL A 92 -1 O VAL A 90 N GLY A 72 SHEET 5 B 5 MET A 138 LYS A 140 -1 O TYR A 139 N ALA A 91 SHEET 1 C 4 TYR A 129 VAL A 132 0 SHEET 2 C 4 VAL A 28 VAL A 37 -1 N VAL A 28 O VAL A 132 SHEET 3 C 4 ARG A 342 LEU A 345 -1 O LEU A 345 N ALA A 35 SHEET 4 C 4 ILE A 318 MET A 322 1 N LYS A 320 O VAL A 344 SHEET 1 D 2 ARG A 48 PHE A 49 0 SHEET 2 D 2 LEU A 52 ARG A 53 -1 O LEU A 52 N PHE A 49 SHEET 1 E 2 TRP A 95 GLN A 96 0 SHEET 2 E 2 ARG A 116 TRP A 117 -1 O ARG A 116 N GLN A 96 SHEET 1 F12 TYR A 219 ASN A 222 0 SHEET 2 F12 THR A 198 ASP A 203 1 N GLY A 201 O TYR A 219 SHEET 3 F12 THR A 173 VAL A 177 1 N VAL A 176 O ILE A 200 SHEET 4 F12 VAL A 241 ASP A 246 1 O ILE A 245 N LEU A 175 SHEET 5 F12 LEU A 261 MET A 269 1 O VAL A 268 N VAL A 244 SHEET 6 F12 GLN A 290 GLY A 293 1 O GLN A 290 N TYR A 267 SHEET 7 F12 GLN B 290 GLY B 293 -1 O PHE B 291 N PHE A 291 SHEET 8 F12 LEU B 261 MET B 269 1 N TYR B 267 O GLN B 290 SHEET 9 F12 VAL B 241 ASP B 246 1 N VAL B 244 O VAL B 268 SHEET 10 F12 THR B 173 VAL B 177 1 N LEU B 175 O ILE B 245 SHEET 11 F12 THR B 198 ASP B 203 1 O ILE B 200 N VAL B 176 SHEET 12 F12 TYR B 219 ASN B 222 1 O TYR B 219 N GLY B 201 SHEET 1 G 2 ASP A 276 HIS A 280 0 SHEET 2 G 2 ASP B 276 HIS B 280 -1 O TYR B 279 N LEU A 277 SHEET 1 H 3 SER B 14 GLU B 17 0 SHEET 2 H 3 ARG B 2 LEU B 6 -1 N ALA B 3 O GLN B 16 SHEET 3 H 3 VAL B 64 THR B 65 -1 O VAL B 64 N LEU B 6 SHEET 1 I 5 TYR B 129 VAL B 132 0 SHEET 2 I 5 VAL B 28 VAL B 37 -1 N VAL B 28 O VAL B 132 SHEET 3 I 5 GLU B 69 VAL B 77 -1 O GLU B 76 N LEU B 29 SHEET 4 I 5 LEU B 89 VAL B 92 -1 O VAL B 90 N GLY B 72 SHEET 5 I 5 MET B 138 LYS B 140 -1 O TYR B 139 N ALA B 91 SHEET 1 J 4 TYR B 129 VAL B 132 0 SHEET 2 J 4 VAL B 28 VAL B 37 -1 N VAL B 28 O VAL B 132 SHEET 3 J 4 ARG B 342 LEU B 345 -1 O LEU B 345 N ALA B 35 SHEET 4 J 4 ILE B 318 MET B 322 1 N LYS B 320 O VAL B 344 SHEET 1 K 2 ARG B 48 PHE B 49 0 SHEET 2 K 2 LEU B 52 ARG B 53 -1 O LEU B 52 N PHE B 49 SHEET 1 L 2 TRP B 95 GLN B 96 0 SHEET 2 L 2 ARG B 116 TRP B 117 -1 O ARG B 116 N GLN B 96 LINK SG CYS A 38 ZN ZN A 500 1555 1555 2.29 LINK NE2 HIS A 68 ZN ZN A 500 1555 1555 2.09 LINK OE2 GLU A 98 ZN ZN A 400 1555 1555 2.13 LINK SG CYS A 101 ZN ZN A 400 1555 1555 2.29 LINK SG CYS A 104 ZN ZN A 400 1555 1555 2.31 LINK SG CYS A 112 ZN ZN A 400 1555 1555 2.29 LINK SG CYS A 154 ZN ZN A 500 1555 1555 2.30 LINK ZN ZN A 500 O1 ETX A 600 1555 1555 2.25 LINK SG CYS B 38 ZN ZN B 500 1555 1555 2.29 LINK NE2 HIS B 68 ZN ZN B 500 1555 1555 2.08 LINK OE2 GLU B 98 ZN ZN B 400 1555 1555 2.09 LINK SG CYS B 101 ZN ZN B 400 1555 1555 2.29 LINK SG CYS B 104 ZN ZN B 400 1555 1555 2.30 LINK SG CYS B 112 ZN ZN B 400 1555 1555 2.29 LINK SG CYS B 154 ZN ZN B 500 1555 1555 2.32 LINK ZN ZN B 500 O1 ETX B 600 1555 1555 2.31 CISPEP 1 LEU A 62 PRO A 63 0 0.02 CISPEP 2 LEU B 62 PRO B 63 0 0.28 SITE 1 ZNS 4 CYS A 112 GLU A 98 CYS A 101 CYS A 104 SITE 1 ZNC 4 CYS A 38 CYS A 154 HIS A 68 ETX A 600 SITE 1 ZNT 4 CYS B 112 GLU B 98 CYS B 101 CYS B 104 SITE 1 ZND 4 CYS B 38 CYS B 154 HIS B 68 ETX B 600 SITE 1 AC1 5 CYS A 38 HIS A 68 CYS A 154 NAD A 403 SITE 2 AC1 5 ETX A 600 SITE 1 AC2 4 GLU A 98 CYS A 101 CYS A 104 CYS A 112 SITE 1 AC3 5 CYS B 38 HIS B 68 CYS B 154 NAD B 403 SITE 2 AC3 5 ETX B 600 SITE 1 AC4 4 GLU B 98 CYS B 101 CYS B 104 CYS B 112 SITE 1 AC5 33 CYS A 38 HIS A 39 SER A 40 HIS A 43 SITE 2 AC5 33 CYS A 154 THR A 158 GLY A 178 GLY A 180 SITE 3 AC5 33 GLY A 181 GLY A 182 LEU A 183 ASP A 203 SITE 4 AC5 33 VAL A 204 ARG A 205 LEU A 247 ASN A 248 SITE 5 AC5 33 VAL A 270 GLY A 271 LEU A 272 PHE A 273 SITE 6 AC5 33 SER A 294 LEU A 295 VAL A 296 LEU A 334 SITE 7 AC5 33 ARG A 342 ZN A 500 ETX A 600 HOH A 605 SITE 8 AC5 33 HOH A 613 HOH A 650 HOH A 664 HOH A 704 SITE 9 AC5 33 THR B 285 SITE 1 AC6 8 SER A 40 PHE A 49 HIS A 68 TRP A 95 SITE 2 AC6 8 TRP A 117 CYS A 154 NAD A 403 ZN A 500 SITE 1 AC7 33 THR A 285 CYS B 38 HIS B 39 SER B 40 SITE 2 AC7 33 HIS B 43 CYS B 154 THR B 158 GLY B 178 SITE 3 AC7 33 GLY B 180 GLY B 181 GLY B 182 LEU B 183 SITE 4 AC7 33 ASP B 203 VAL B 204 ARG B 205 LEU B 247 SITE 5 AC7 33 ASN B 248 VAL B 270 GLY B 271 LEU B 272 SITE 6 AC7 33 PHE B 273 SER B 294 LEU B 295 VAL B 296 SITE 7 AC7 33 LEU B 334 ARG B 342 ZN B 500 ETX B 600 SITE 8 AC7 33 HOH B 606 HOH B 612 HOH B 617 HOH B 646 SITE 9 AC7 33 HOH B 654 SITE 1 AC8 8 SER B 40 PHE B 49 HIS B 68 TRP B 95 SITE 2 AC8 8 TRP B 117 CYS B 154 NAD B 403 ZN B 500 CRYST1 131.064 83.014 68.674 90.00 96.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007630 0.000000 0.000864 0.00000 SCALE2 0.000000 0.012046 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014655 0.00000