data_1R3E # _entry.id 1R3E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1R3E pdb_00001r3e 10.2210/pdb1r3e/pdb NDB PR0105 ? ? RCSB RCSB020387 ? ? WWPDB D_1000020387 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-11-04 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2018-02-07 6 'Structure model' 1 5 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' Advisory 5 5 'Structure model' 'Experimental preparation' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' exptl_crystal_grow 2 5 'Structure model' pdbx_validate_close_contact 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_entry_details 7 6 'Structure model' pdbx_modification_feature 8 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 5 'Structure model' '_exptl_crystal_grow.temp' 3 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 4 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 5 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 6 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 7 6 'Structure model' '_database_2.pdbx_DOI' 8 6 'Structure model' '_database_2.pdbx_database_accession' 9 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R3E _pdbx_database_status.recvd_initial_deposition_date 2003-10-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1R3F _pdbx_database_related.details ;Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit ; _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pan, H.' 1 ? 'Agarwalla, S.' 2 ? 'Moustakas, D.T.' 3 ? 'Finer-Moore, J.' 4 ? 'Stroud, R.M.' 5 ? # _citation.id primary _citation.title ;Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA Recognition Through a Combination of Rigid Docking and Induced Fit ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 100 _citation.page_first 12648 _citation.page_last 12653 _citation.year 2003 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14566049 _citation.pdbx_database_id_DOI 10.1073/pnas.2135585100 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pan, H.' 1 ? primary 'Agarwalla, S.' 2 ? primary 'Moustakas, D.T.' 3 ? primary 'Finer-Moore, J.' 4 ? primary 'Stroud, R.M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*CP*UP*GP*UP*GP*UP*(FHU)P*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3'" 5416.227 1 ? ? ? ? 2 polymer syn "5'-R(*CP*UP*GP*UP*GP*UP*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3'" 5380.221 2 ? ? ? ? 3 polymer man 'tRNA pseudouridine synthase B' 35516.156 1 4.2.1.70 ? ? ? 4 water nat water 18.015 263 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'tRNA pseudouridine 55 synthase, Psi55 synthase, Pseudouridylate synthase, Uracil hydrolyase' # _entity_name_sys.entity_id 3 _entity_name_sys.name 'EC 4.2.1.70' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes 'CUGUGU(FHU)CGAUCCACAG' CUGUGUUCGAUCCACAG C ? 2 polyribonucleotide no no CUGUGUUCGAUCCACAG CUGUGUUCGAUCCACAG D,E ? 3 'polypeptide(L)' no no ;MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETF DITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVS FRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTK MILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKHERNERVLTLRKVFNTR ; ;MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETF DITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVS FRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTK MILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKHERNERVLTLRKVFNTR ; A ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 U n 1 3 G n 1 4 U n 1 5 G n 1 6 U n 1 7 FHU n 1 8 C n 1 9 G n 1 10 A n 1 11 U n 1 12 C n 1 13 C n 1 14 A n 1 15 C n 1 16 A n 1 17 G n 2 1 C n 2 2 U n 2 3 G n 2 4 U n 2 5 G n 2 6 U n 2 7 U n 2 8 C n 2 9 G n 2 10 A n 2 11 U n 2 12 C n 2 13 C n 2 14 A n 2 15 C n 2 16 A n 2 17 G n 3 1 MET n 3 2 LYS n 3 3 HIS n 3 4 GLY n 3 5 ILE n 3 6 LEU n 3 7 VAL n 3 8 ALA n 3 9 TYR n 3 10 LYS n 3 11 PRO n 3 12 LYS n 3 13 GLY n 3 14 PRO n 3 15 THR n 3 16 SER n 3 17 HIS n 3 18 ASP n 3 19 VAL n 3 20 VAL n 3 21 ASP n 3 22 GLU n 3 23 VAL n 3 24 ARG n 3 25 LYS n 3 26 LYS n 3 27 LEU n 3 28 LYS n 3 29 THR n 3 30 ARG n 3 31 LYS n 3 32 VAL n 3 33 GLY n 3 34 HIS n 3 35 GLY n 3 36 GLY n 3 37 THR n 3 38 LEU n 3 39 ASP n 3 40 PRO n 3 41 PHE n 3 42 ALA n 3 43 CYS n 3 44 GLY n 3 45 VAL n 3 46 LEU n 3 47 ILE n 3 48 ILE n 3 49 GLY n 3 50 VAL n 3 51 ASN n 3 52 GLN n 3 53 GLY n 3 54 THR n 3 55 ARG n 3 56 ILE n 3 57 LEU n 3 58 GLU n 3 59 PHE n 3 60 TYR n 3 61 LYS n 3 62 ASP n 3 63 LEU n 3 64 LYS n 3 65 LYS n 3 66 VAL n 3 67 TYR n 3 68 TRP n 3 69 VAL n 3 70 LYS n 3 71 MET n 3 72 ARG n 3 73 LEU n 3 74 GLY n 3 75 LEU n 3 76 ILE n 3 77 THR n 3 78 GLU n 3 79 THR n 3 80 PHE n 3 81 ASP n 3 82 ILE n 3 83 THR n 3 84 GLY n 3 85 GLU n 3 86 VAL n 3 87 VAL n 3 88 GLU n 3 89 GLU n 3 90 ARG n 3 91 GLU n 3 92 CYS n 3 93 ASN n 3 94 VAL n 3 95 THR n 3 96 GLU n 3 97 GLU n 3 98 GLU n 3 99 ILE n 3 100 ARG n 3 101 GLU n 3 102 ALA n 3 103 ILE n 3 104 PHE n 3 105 SER n 3 106 PHE n 3 107 VAL n 3 108 GLY n 3 109 GLU n 3 110 TYR n 3 111 ASP n 3 112 GLN n 3 113 VAL n 3 114 PRO n 3 115 PRO n 3 116 ALA n 3 117 TYR n 3 118 SER n 3 119 ALA n 3 120 LYS n 3 121 LYS n 3 122 TYR n 3 123 LYS n 3 124 GLY n 3 125 GLU n 3 126 ARG n 3 127 LEU n 3 128 TYR n 3 129 LYS n 3 130 LEU n 3 131 ALA n 3 132 ARG n 3 133 GLU n 3 134 GLY n 3 135 LYS n 3 136 ILE n 3 137 ILE n 3 138 ASN n 3 139 LEU n 3 140 PRO n 3 141 PRO n 3 142 LYS n 3 143 ARG n 3 144 VAL n 3 145 LYS n 3 146 ILE n 3 147 PHE n 3 148 LYS n 3 149 ILE n 3 150 TRP n 3 151 ASP n 3 152 VAL n 3 153 ASN n 3 154 ILE n 3 155 GLU n 3 156 GLY n 3 157 ARG n 3 158 ASP n 3 159 VAL n 3 160 SER n 3 161 PHE n 3 162 ARG n 3 163 VAL n 3 164 GLU n 3 165 VAL n 3 166 SER n 3 167 PRO n 3 168 GLY n 3 169 THR n 3 170 TYR n 3 171 ILE n 3 172 ARG n 3 173 SER n 3 174 LEU n 3 175 CYS n 3 176 MET n 3 177 ASP n 3 178 ILE n 3 179 GLY n 3 180 TYR n 3 181 LYS n 3 182 LEU n 3 183 GLY n 3 184 CYS n 3 185 GLY n 3 186 ALA n 3 187 THR n 3 188 ALA n 3 189 VAL n 3 190 GLU n 3 191 LEU n 3 192 VAL n 3 193 ARG n 3 194 GLU n 3 195 SER n 3 196 VAL n 3 197 GLY n 3 198 PRO n 3 199 HIS n 3 200 THR n 3 201 ILE n 3 202 GLU n 3 203 GLU n 3 204 SER n 3 205 LEU n 3 206 ASN n 3 207 VAL n 3 208 PHE n 3 209 GLU n 3 210 ALA n 3 211 ALA n 3 212 PRO n 3 213 GLU n 3 214 GLU n 3 215 ILE n 3 216 GLU n 3 217 ASN n 3 218 ARG n 3 219 ILE n 3 220 ILE n 3 221 PRO n 3 222 LEU n 3 223 GLU n 3 224 LYS n 3 225 CYS n 3 226 LEU n 3 227 GLU n 3 228 TRP n 3 229 LEU n 3 230 PRO n 3 231 ARG n 3 232 VAL n 3 233 VAL n 3 234 VAL n 3 235 HIS n 3 236 GLN n 3 237 GLU n 3 238 SER n 3 239 THR n 3 240 LYS n 3 241 MET n 3 242 ILE n 3 243 LEU n 3 244 ASN n 3 245 GLY n 3 246 SER n 3 247 GLN n 3 248 ILE n 3 249 HIS n 3 250 LEU n 3 251 GLU n 3 252 MET n 3 253 LEU n 3 254 LYS n 3 255 GLU n 3 256 TRP n 3 257 ASP n 3 258 GLY n 3 259 PHE n 3 260 LYS n 3 261 LYS n 3 262 GLY n 3 263 GLU n 3 264 VAL n 3 265 VAL n 3 266 ARG n 3 267 VAL n 3 268 PHE n 3 269 ASN n 3 270 GLU n 3 271 GLU n 3 272 GLY n 3 273 ARG n 3 274 LEU n 3 275 LEU n 3 276 ALA n 3 277 LEU n 3 278 ALA n 3 279 GLU n 3 280 ALA n 3 281 GLU n 3 282 ARG n 3 283 ASN n 3 284 SER n 3 285 SER n 3 286 PHE n 3 287 LEU n 3 288 GLU n 3 289 THR n 3 290 LEU n 3 291 ARG n 3 292 LYS n 3 293 HIS n 3 294 GLU n 3 295 ARG n 3 296 ASN n 3 297 GLU n 3 298 ARG n 3 299 VAL n 3 300 LEU n 3 301 THR n 3 302 LEU n 3 303 ARG n 3 304 LYS n 3 305 VAL n 3 306 PHE n 3 307 ASN n 3 308 THR n 3 309 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene TRUB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FHU 'RNA linking' n "(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 F N2 O10 P' 360.187 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 404 404 C CYT C . n A 1 2 U 2 405 405 U URA C . n A 1 3 G 3 406 406 G GUA C . n A 1 4 U 4 407 407 U URA C . n A 1 5 G 5 408 408 G GUA C . n A 1 6 U 6 409 409 U URA C . n A 1 7 FHU 7 410 410 FHU FHU C . n A 1 8 C 8 411 411 C CYT C . n A 1 9 G 9 412 412 G GUA C . n A 1 10 A 10 413 413 A ADE C . n A 1 11 U 11 414 414 U URA C . n A 1 12 C 12 415 415 C CYT C . n A 1 13 C 13 416 416 C CYT C . n A 1 14 A 14 417 417 A ADE C . n A 1 15 C 15 418 418 C CYT C . n A 1 16 A 16 419 419 A ADE C . n A 1 17 G 17 420 420 G GUA C . n B 2 1 C 1 404 404 C CYT D . n B 2 2 U 2 405 405 U URA D . n B 2 3 G 3 406 406 G GUA D . n B 2 4 U 4 407 407 U URA D . n B 2 5 G 5 408 408 G GUA D . n B 2 6 U 6 409 409 U URA D . n B 2 7 U 7 410 410 U URA D . n B 2 8 C 8 411 411 C CYT D . n B 2 9 G 9 412 412 G GUA D . n B 2 10 A 10 413 413 A ADE D . n B 2 11 U 11 414 414 U URA D . n B 2 12 C 12 415 415 C CYT D . n B 2 13 C 13 416 416 C CYT D . n B 2 14 A 14 417 417 A ADE D . n B 2 15 C 15 418 418 C CYT D . n B 2 16 A 16 419 419 A A D . n B 2 17 G 17 420 420 G GUA D . n C 2 1 C 1 404 404 C CYT E . n C 2 2 U 2 405 405 U URA E . n C 2 3 G 3 406 406 G GUA E . n C 2 4 U 4 407 407 U URA E . n C 2 5 G 5 408 408 G GUA E . n C 2 6 U 6 409 409 U URA E . n C 2 7 U 7 410 410 U URA E . n C 2 8 C 8 411 411 C CYT E . n C 2 9 G 9 412 412 G GUA E . n C 2 10 A 10 413 413 A ADE E . n C 2 11 U 11 414 414 U URA E . n C 2 12 C 12 415 415 C CYT E . n C 2 13 C 13 416 416 C CYT E . n C 2 14 A 14 417 417 A ADE E . n C 2 15 C 15 418 418 C CYT E . n C 2 16 A 16 419 419 A ADE E . n C 2 17 G 17 420 420 G GUA E . n D 3 1 MET 1 10 10 MET MET A . n D 3 2 LYS 2 11 11 LYS LYS A . n D 3 3 HIS 3 12 12 HIS HIS A . n D 3 4 GLY 4 13 13 GLY GLY A . n D 3 5 ILE 5 14 14 ILE ILE A . n D 3 6 LEU 6 15 15 LEU LEU A . n D 3 7 VAL 7 16 16 VAL VAL A . n D 3 8 ALA 8 17 17 ALA ALA A . n D 3 9 TYR 9 18 18 TYR TYR A . n D 3 10 LYS 10 19 19 LYS LYS A . n D 3 11 PRO 11 20 20 PRO PRO A . n D 3 12 LYS 12 21 21 LYS LYS A . n D 3 13 GLY 13 22 22 GLY GLY A . n D 3 14 PRO 14 23 23 PRO PRO A . n D 3 15 THR 15 24 24 THR THR A . n D 3 16 SER 16 25 25 SER SER A . n D 3 17 HIS 17 26 26 HIS HIS A . n D 3 18 ASP 18 27 27 ASP ASP A . n D 3 19 VAL 19 28 28 VAL VAL A . n D 3 20 VAL 20 29 29 VAL VAL A . n D 3 21 ASP 21 30 30 ASP ASP A . n D 3 22 GLU 22 31 31 GLU GLU A . n D 3 23 VAL 23 32 32 VAL VAL A . n D 3 24 ARG 24 33 33 ARG ARG A . n D 3 25 LYS 25 34 34 LYS LYS A . n D 3 26 LYS 26 35 35 LYS LYS A . n D 3 27 LEU 27 36 36 LEU LEU A . n D 3 28 LYS 28 37 37 LYS LYS A . n D 3 29 THR 29 38 38 THR THR A . n D 3 30 ARG 30 39 39 ARG ARG A . n D 3 31 LYS 31 40 40 LYS LYS A . n D 3 32 VAL 32 41 41 VAL VAL A . n D 3 33 GLY 33 42 42 GLY GLY A . n D 3 34 HIS 34 43 43 HIS HIS A . n D 3 35 GLY 35 44 44 GLY GLY A . n D 3 36 GLY 36 45 45 GLY GLY A . n D 3 37 THR 37 46 46 THR THR A . n D 3 38 LEU 38 47 47 LEU LEU A . n D 3 39 ASP 39 48 48 ASP ASP A . n D 3 40 PRO 40 49 49 PRO PRO A . n D 3 41 PHE 41 50 50 PHE PHE A . n D 3 42 ALA 42 51 51 ALA ALA A . n D 3 43 CYS 43 52 52 CYS CYS A . n D 3 44 GLY 44 53 53 GLY GLY A . n D 3 45 VAL 45 54 54 VAL VAL A . n D 3 46 LEU 46 55 55 LEU LEU A . n D 3 47 ILE 47 56 56 ILE ILE A . n D 3 48 ILE 48 57 57 ILE ILE A . n D 3 49 GLY 49 58 58 GLY GLY A . n D 3 50 VAL 50 59 59 VAL VAL A . n D 3 51 ASN 51 60 60 ASN ASN A . n D 3 52 GLN 52 61 61 GLN GLN A . n D 3 53 GLY 53 62 62 GLY GLY A . n D 3 54 THR 54 63 63 THR THR A . n D 3 55 ARG 55 64 64 ARG ARG A . n D 3 56 ILE 56 65 65 ILE ILE A . n D 3 57 LEU 57 66 66 LEU LEU A . n D 3 58 GLU 58 67 67 GLU GLU A . n D 3 59 PHE 59 68 68 PHE PHE A . n D 3 60 TYR 60 69 69 TYR TYR A . n D 3 61 LYS 61 70 70 LYS LYS A . n D 3 62 ASP 62 71 71 ASP ASP A . n D 3 63 LEU 63 72 72 LEU LEU A . n D 3 64 LYS 64 73 73 LYS LYS A . n D 3 65 LYS 65 74 74 LYS LYS A . n D 3 66 VAL 66 75 75 VAL VAL A . n D 3 67 TYR 67 76 76 TYR TYR A . n D 3 68 TRP 68 77 77 TRP TRP A . n D 3 69 VAL 69 78 78 VAL VAL A . n D 3 70 LYS 70 79 79 LYS LYS A . n D 3 71 MET 71 80 80 MET MET A . n D 3 72 ARG 72 81 81 ARG ARG A . n D 3 73 LEU 73 82 82 LEU LEU A . n D 3 74 GLY 74 83 83 GLY GLY A . n D 3 75 LEU 75 84 84 LEU LEU A . n D 3 76 ILE 76 85 85 ILE ILE A . n D 3 77 THR 77 86 86 THR THR A . n D 3 78 GLU 78 87 87 GLU GLU A . n D 3 79 THR 79 88 88 THR THR A . n D 3 80 PHE 80 89 89 PHE PHE A . n D 3 81 ASP 81 90 90 ASP ASP A . n D 3 82 ILE 82 91 91 ILE ILE A . n D 3 83 THR 83 92 92 THR THR A . n D 3 84 GLY 84 93 93 GLY GLY A . n D 3 85 GLU 85 94 94 GLU GLU A . n D 3 86 VAL 86 95 95 VAL VAL A . n D 3 87 VAL 87 96 96 VAL VAL A . n D 3 88 GLU 88 97 97 GLU GLU A . n D 3 89 GLU 89 98 98 GLU GLU A . n D 3 90 ARG 90 99 99 ARG ARG A . n D 3 91 GLU 91 100 100 GLU GLU A . n D 3 92 CYS 92 101 101 CYS CYS A . n D 3 93 ASN 93 102 102 ASN ASN A . n D 3 94 VAL 94 103 103 VAL VAL A . n D 3 95 THR 95 104 104 THR THR A . n D 3 96 GLU 96 105 105 GLU GLU A . n D 3 97 GLU 97 106 106 GLU GLU A . n D 3 98 GLU 98 107 107 GLU GLU A . n D 3 99 ILE 99 108 108 ILE ILE A . n D 3 100 ARG 100 109 109 ARG ARG A . n D 3 101 GLU 101 110 110 GLU GLU A . n D 3 102 ALA 102 111 111 ALA ALA A . n D 3 103 ILE 103 112 112 ILE ILE A . n D 3 104 PHE 104 113 113 PHE PHE A . n D 3 105 SER 105 114 114 SER SER A . n D 3 106 PHE 106 115 115 PHE PHE A . n D 3 107 VAL 107 116 116 VAL VAL A . n D 3 108 GLY 108 117 117 GLY GLY A . n D 3 109 GLU 109 118 118 GLU GLU A . n D 3 110 TYR 110 119 119 TYR TYR A . n D 3 111 ASP 111 120 120 ASP ASP A . n D 3 112 GLN 112 121 121 GLN GLN A . n D 3 113 VAL 113 122 122 VAL VAL A . n D 3 114 PRO 114 123 123 PRO PRO A . n D 3 115 PRO 115 124 124 PRO PRO A . n D 3 116 ALA 116 125 125 ALA ALA A . n D 3 117 TYR 117 126 126 TYR TYR A . n D 3 118 SER 118 127 127 SER SER A . n D 3 119 ALA 119 128 128 ALA ALA A . n D 3 120 LYS 120 129 129 LYS LYS A . n D 3 121 LYS 121 130 130 LYS LYS A . n D 3 122 TYR 122 131 131 TYR TYR A . n D 3 123 LYS 123 132 132 LYS LYS A . n D 3 124 GLY 124 133 133 GLY GLY A . n D 3 125 GLU 125 134 134 GLU GLU A . n D 3 126 ARG 126 135 135 ARG ARG A . n D 3 127 LEU 127 136 136 LEU LEU A . n D 3 128 TYR 128 137 137 TYR TYR A . n D 3 129 LYS 129 138 138 LYS LYS A . n D 3 130 LEU 130 139 139 LEU LEU A . n D 3 131 ALA 131 140 140 ALA ALA A . n D 3 132 ARG 132 141 141 ARG ARG A . n D 3 133 GLU 133 142 142 GLU GLU A . n D 3 134 GLY 134 143 143 GLY GLY A . n D 3 135 LYS 135 144 144 LYS LYS A . n D 3 136 ILE 136 145 145 ILE ILE A . n D 3 137 ILE 137 146 146 ILE ILE A . n D 3 138 ASN 138 147 147 ASN ASN A . n D 3 139 LEU 139 148 148 LEU LEU A . n D 3 140 PRO 140 149 149 PRO PRO A . n D 3 141 PRO 141 150 150 PRO PRO A . n D 3 142 LYS 142 151 151 LYS LYS A . n D 3 143 ARG 143 152 152 ARG ARG A . n D 3 144 VAL 144 153 153 VAL VAL A . n D 3 145 LYS 145 154 154 LYS LYS A . n D 3 146 ILE 146 155 155 ILE ILE A . n D 3 147 PHE 147 156 156 PHE PHE A . n D 3 148 LYS 148 157 157 LYS LYS A . n D 3 149 ILE 149 158 158 ILE ILE A . n D 3 150 TRP 150 159 159 TRP TRP A . n D 3 151 ASP 151 160 160 ASP ASP A . n D 3 152 VAL 152 161 161 VAL VAL A . n D 3 153 ASN 153 162 162 ASN ASN A . n D 3 154 ILE 154 163 163 ILE ILE A . n D 3 155 GLU 155 164 164 GLU GLU A . n D 3 156 GLY 156 165 165 GLY GLY A . n D 3 157 ARG 157 166 166 ARG ARG A . n D 3 158 ASP 158 167 167 ASP ASP A . n D 3 159 VAL 159 168 168 VAL VAL A . n D 3 160 SER 160 169 169 SER SER A . n D 3 161 PHE 161 170 170 PHE PHE A . n D 3 162 ARG 162 171 171 ARG ARG A . n D 3 163 VAL 163 172 172 VAL VAL A . n D 3 164 GLU 164 173 173 GLU GLU A . n D 3 165 VAL 165 174 174 VAL VAL A . n D 3 166 SER 166 175 175 SER SER A . n D 3 167 PRO 167 176 176 PRO PRO A . n D 3 168 GLY 168 177 177 GLY GLY A . n D 3 169 THR 169 178 178 THR THR A . n D 3 170 TYR 170 179 179 TYR TYR A . n D 3 171 ILE 171 180 180 ILE ILE A . n D 3 172 ARG 172 181 181 ARG ARG A . n D 3 173 SER 173 182 182 SER SER A . n D 3 174 LEU 174 183 183 LEU LEU A . n D 3 175 CYS 175 184 184 CYS CYS A . n D 3 176 MET 176 185 185 MET MET A . n D 3 177 ASP 177 186 186 ASP ASP A . n D 3 178 ILE 178 187 187 ILE ILE A . n D 3 179 GLY 179 188 188 GLY GLY A . n D 3 180 TYR 180 189 189 TYR TYR A . n D 3 181 LYS 181 190 190 LYS LYS A . n D 3 182 LEU 182 191 191 LEU LEU A . n D 3 183 GLY 183 192 192 GLY GLY A . n D 3 184 CYS 184 193 193 CYS CYS A . n D 3 185 GLY 185 194 194 GLY GLY A . n D 3 186 ALA 186 195 195 ALA ALA A . n D 3 187 THR 187 196 196 THR THR A . n D 3 188 ALA 188 197 197 ALA ALA A . n D 3 189 VAL 189 198 198 VAL VAL A . n D 3 190 GLU 190 199 199 GLU GLU A . n D 3 191 LEU 191 200 200 LEU LEU A . n D 3 192 VAL 192 201 201 VAL VAL A . n D 3 193 ARG 193 202 202 ARG ARG A . n D 3 194 GLU 194 203 203 GLU GLU A . n D 3 195 SER 195 204 204 SER SER A . n D 3 196 VAL 196 205 205 VAL VAL A . n D 3 197 GLY 197 206 206 GLY GLY A . n D 3 198 PRO 198 207 207 PRO PRO A . n D 3 199 HIS 199 208 208 HIS HIS A . n D 3 200 THR 200 209 209 THR THR A . n D 3 201 ILE 201 210 210 ILE ILE A . n D 3 202 GLU 202 211 211 GLU GLU A . n D 3 203 GLU 203 212 212 GLU GLU A . n D 3 204 SER 204 213 213 SER SER A . n D 3 205 LEU 205 214 214 LEU LEU A . n D 3 206 ASN 206 215 215 ASN ASN A . n D 3 207 VAL 207 216 216 VAL VAL A . n D 3 208 PHE 208 217 217 PHE PHE A . n D 3 209 GLU 209 218 218 GLU GLU A . n D 3 210 ALA 210 219 219 ALA ALA A . n D 3 211 ALA 211 220 220 ALA ALA A . n D 3 212 PRO 212 221 221 PRO PRO A . n D 3 213 GLU 213 222 222 GLU GLU A . n D 3 214 GLU 214 223 223 GLU GLU A . n D 3 215 ILE 215 224 224 ILE ILE A . n D 3 216 GLU 216 225 225 GLU GLU A . n D 3 217 ASN 217 226 226 ASN ASN A . n D 3 218 ARG 218 227 227 ARG ARG A . n D 3 219 ILE 219 228 228 ILE ILE A . n D 3 220 ILE 220 229 229 ILE ILE A . n D 3 221 PRO 221 230 230 PRO PRO A . n D 3 222 LEU 222 231 231 LEU LEU A . n D 3 223 GLU 223 232 232 GLU GLU A . n D 3 224 LYS 224 233 233 LYS LYS A . n D 3 225 CYS 225 234 234 CYS CYS A . n D 3 226 LEU 226 235 235 LEU LEU A . n D 3 227 GLU 227 236 236 GLU GLU A . n D 3 228 TRP 228 237 237 TRP TRP A . n D 3 229 LEU 229 238 238 LEU LEU A . n D 3 230 PRO 230 239 239 PRO PRO A . n D 3 231 ARG 231 240 240 ARG ARG A . n D 3 232 VAL 232 241 241 VAL VAL A . n D 3 233 VAL 233 242 242 VAL VAL A . n D 3 234 VAL 234 243 243 VAL VAL A . n D 3 235 HIS 235 244 244 HIS HIS A . n D 3 236 GLN 236 245 245 GLN GLN A . n D 3 237 GLU 237 246 246 GLU GLU A . n D 3 238 SER 238 247 247 SER SER A . n D 3 239 THR 239 248 248 THR THR A . n D 3 240 LYS 240 249 249 LYS LYS A . n D 3 241 MET 241 250 250 MET MET A . n D 3 242 ILE 242 251 251 ILE ILE A . n D 3 243 LEU 243 252 252 LEU LEU A . n D 3 244 ASN 244 253 253 ASN ASN A . n D 3 245 GLY 245 254 254 GLY GLY A . n D 3 246 SER 246 255 255 SER SER A . n D 3 247 GLN 247 256 256 GLN GLN A . n D 3 248 ILE 248 257 257 ILE ILE A . n D 3 249 HIS 249 258 258 HIS HIS A . n D 3 250 LEU 250 259 259 LEU LEU A . n D 3 251 GLU 251 260 260 GLU GLU A . n D 3 252 MET 252 261 261 MET MET A . n D 3 253 LEU 253 262 262 LEU LEU A . n D 3 254 LYS 254 263 263 LYS LYS A . n D 3 255 GLU 255 264 264 GLU GLU A . n D 3 256 TRP 256 265 265 TRP TRP A . n D 3 257 ASP 257 266 266 ASP ASP A . n D 3 258 GLY 258 267 267 GLY GLY A . n D 3 259 PHE 259 268 268 PHE PHE A . n D 3 260 LYS 260 269 269 LYS LYS A . n D 3 261 LYS 261 270 270 LYS LYS A . n D 3 262 GLY 262 271 271 GLY GLY A . n D 3 263 GLU 263 272 272 GLU GLU A . n D 3 264 VAL 264 273 273 VAL VAL A . n D 3 265 VAL 265 274 274 VAL VAL A . n D 3 266 ARG 266 275 275 ARG ARG A . n D 3 267 VAL 267 276 276 VAL VAL A . n D 3 268 PHE 268 277 277 PHE PHE A . n D 3 269 ASN 269 278 278 ASN ASN A . n D 3 270 GLU 270 279 279 GLU GLU A . n D 3 271 GLU 271 280 280 GLU GLU A . n D 3 272 GLY 272 281 281 GLY GLY A . n D 3 273 ARG 273 282 282 ARG ARG A . n D 3 274 LEU 274 283 283 LEU LEU A . n D 3 275 LEU 275 284 284 LEU LEU A . n D 3 276 ALA 276 285 285 ALA ALA A . n D 3 277 LEU 277 286 286 LEU LEU A . n D 3 278 ALA 278 287 287 ALA ALA A . n D 3 279 GLU 279 288 288 GLU GLU A . n D 3 280 ALA 280 289 289 ALA ALA A . n D 3 281 GLU 281 290 290 GLU GLU A . n D 3 282 ARG 282 291 291 ARG ARG A . n D 3 283 ASN 283 292 292 ASN ASN A . n D 3 284 SER 284 293 293 SER SER A . n D 3 285 SER 285 294 294 SER SER A . n D 3 286 PHE 286 295 295 PHE PHE A . n D 3 287 LEU 287 296 296 LEU LEU A . n D 3 288 GLU 288 297 297 GLU GLU A . n D 3 289 THR 289 298 298 THR THR A . n D 3 290 LEU 290 299 299 LEU LEU A . n D 3 291 ARG 291 300 300 ARG ARG A . n D 3 292 LYS 292 301 301 LYS LYS A . n D 3 293 HIS 293 302 ? ? ? A . n D 3 294 GLU 294 303 ? ? ? A . n D 3 295 ARG 295 304 ? ? ? A . n D 3 296 ASN 296 305 ? ? ? A . n D 3 297 GLU 297 306 306 GLU GLU A . n D 3 298 ARG 298 307 307 ARG ARG A . n D 3 299 VAL 299 308 308 VAL VAL A . n D 3 300 LEU 300 309 309 LEU LEU A . n D 3 301 THR 301 310 310 THR THR A . n D 3 302 LEU 302 311 311 LEU LEU A . n D 3 303 ARG 303 312 312 ARG ARG A . n D 3 304 LYS 304 313 313 LYS LYS A . n D 3 305 VAL 305 314 314 VAL VAL A . n D 3 306 PHE 306 315 315 PHE PHE A . n D 3 307 ASN 307 316 316 ASN ASN A . n D 3 308 THR 308 317 317 THR THR A . n D 3 309 ARG 309 318 318 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 1 1 HOH HOH C . E 4 HOH 2 2 2 HOH HOH C . E 4 HOH 3 5 5 HOH HOH C . E 4 HOH 4 9 9 HOH HOH C . E 4 HOH 5 10 10 HOH HOH C . E 4 HOH 6 12 12 HOH HOH C . E 4 HOH 7 14 14 HOH HOH C . E 4 HOH 8 15 15 HOH HOH C . E 4 HOH 9 20 20 HOH HOH C . E 4 HOH 10 23 23 HOH HOH C . E 4 HOH 11 27 27 HOH HOH C . E 4 HOH 12 29 29 HOH HOH C . E 4 HOH 13 30 30 HOH HOH C . E 4 HOH 14 33 33 HOH HOH C . E 4 HOH 15 39 39 HOH HOH C . E 4 HOH 16 40 40 HOH HOH C . E 4 HOH 17 41 41 HOH HOH C . E 4 HOH 18 44 44 HOH HOH C . E 4 HOH 19 47 47 HOH HOH C . E 4 HOH 20 51 51 HOH HOH C . E 4 HOH 21 71 71 HOH HOH C . E 4 HOH 22 78 78 HOH HOH C . E 4 HOH 23 96 96 HOH HOH C . E 4 HOH 24 124 124 HOH HOH C . E 4 HOH 25 125 125 HOH HOH C . E 4 HOH 26 126 126 HOH HOH C . E 4 HOH 27 131 131 HOH HOH C . E 4 HOH 28 133 133 HOH HOH C . E 4 HOH 29 171 171 HOH HOH C . E 4 HOH 30 188 188 HOH HOH C . E 4 HOH 31 205 205 HOH HOH C . E 4 HOH 32 212 212 HOH HOH C . E 4 HOH 33 217 217 HOH HOH C . E 4 HOH 34 235 235 HOH HOH C . E 4 HOH 35 247 247 HOH HOH C . F 4 HOH 1 50 50 HOH HOH D . F 4 HOH 2 61 61 HOH HOH D . F 4 HOH 3 79 79 HOH HOH D . F 4 HOH 4 85 85 HOH HOH D . F 4 HOH 5 120 120 HOH HOH D . F 4 HOH 6 130 130 HOH HOH D . F 4 HOH 7 139 139 HOH HOH D . F 4 HOH 8 144 144 HOH HOH D . F 4 HOH 9 147 147 HOH HOH D . F 4 HOH 10 158 158 HOH HOH D . F 4 HOH 11 162 162 HOH HOH D . F 4 HOH 12 164 164 HOH HOH D . F 4 HOH 13 168 168 HOH HOH D . F 4 HOH 14 176 176 HOH HOH D . F 4 HOH 15 179 179 HOH HOH D . F 4 HOH 16 181 181 HOH HOH D . F 4 HOH 17 191 191 HOH HOH D . F 4 HOH 18 209 209 HOH HOH D . F 4 HOH 19 220 220 HOH HOH D . F 4 HOH 20 221 221 HOH HOH D . F 4 HOH 21 233 233 HOH HOH D . F 4 HOH 22 237 237 HOH HOH D . F 4 HOH 23 263 263 HOH HOH D . G 4 HOH 1 60 60 HOH HOH E . G 4 HOH 2 66 66 HOH HOH E . G 4 HOH 3 70 70 HOH HOH E . G 4 HOH 4 140 140 HOH HOH E . G 4 HOH 5 145 145 HOH HOH E . G 4 HOH 6 159 159 HOH HOH E . G 4 HOH 7 160 160 HOH HOH E . G 4 HOH 8 165 165 HOH HOH E . G 4 HOH 9 167 167 HOH HOH E . G 4 HOH 10 169 169 HOH HOH E . G 4 HOH 11 170 170 HOH HOH E . G 4 HOH 12 186 186 HOH HOH E . G 4 HOH 13 216 216 HOH HOH E . G 4 HOH 14 229 229 HOH HOH E . G 4 HOH 15 231 231 HOH HOH E . G 4 HOH 16 236 236 HOH HOH E . G 4 HOH 17 242 242 HOH HOH E . G 4 HOH 18 243 243 HOH HOH E . G 4 HOH 19 255 255 HOH HOH E . H 4 HOH 1 319 3 HOH HOH A . H 4 HOH 2 320 4 HOH HOH A . H 4 HOH 3 321 6 HOH HOH A . H 4 HOH 4 322 7 HOH HOH A . H 4 HOH 5 323 8 HOH HOH A . H 4 HOH 6 324 11 HOH HOH A . H 4 HOH 7 325 13 HOH HOH A . H 4 HOH 8 326 16 HOH HOH A . H 4 HOH 9 327 17 HOH HOH A . H 4 HOH 10 328 18 HOH HOH A . H 4 HOH 11 329 19 HOH HOH A . H 4 HOH 12 330 21 HOH HOH A . H 4 HOH 13 331 22 HOH HOH A . H 4 HOH 14 332 24 HOH HOH A . H 4 HOH 15 333 25 HOH HOH A . H 4 HOH 16 334 26 HOH HOH A . H 4 HOH 17 335 28 HOH HOH A . H 4 HOH 18 336 31 HOH HOH A . H 4 HOH 19 337 32 HOH HOH A . H 4 HOH 20 338 34 HOH HOH A . H 4 HOH 21 339 35 HOH HOH A . H 4 HOH 22 340 36 HOH HOH A . H 4 HOH 23 341 37 HOH HOH A . H 4 HOH 24 342 38 HOH HOH A . H 4 HOH 25 343 42 HOH HOH A . H 4 HOH 26 344 43 HOH HOH A . H 4 HOH 27 345 45 HOH HOH A . H 4 HOH 28 346 46 HOH HOH A . H 4 HOH 29 347 48 HOH HOH A . H 4 HOH 30 348 49 HOH HOH A . H 4 HOH 31 349 52 HOH HOH A . H 4 HOH 32 350 53 HOH HOH A . H 4 HOH 33 351 54 HOH HOH A . H 4 HOH 34 352 55 HOH HOH A . H 4 HOH 35 353 56 HOH HOH A . H 4 HOH 36 354 57 HOH HOH A . H 4 HOH 37 355 58 HOH HOH A . H 4 HOH 38 356 59 HOH HOH A . H 4 HOH 39 357 62 HOH HOH A . H 4 HOH 40 358 63 HOH HOH A . H 4 HOH 41 359 64 HOH HOH A . H 4 HOH 42 360 65 HOH HOH A . H 4 HOH 43 361 67 HOH HOH A . H 4 HOH 44 362 68 HOH HOH A . H 4 HOH 45 363 69 HOH HOH A . H 4 HOH 46 364 72 HOH HOH A . H 4 HOH 47 365 73 HOH HOH A . H 4 HOH 48 366 74 HOH HOH A . H 4 HOH 49 367 75 HOH HOH A . H 4 HOH 50 368 76 HOH HOH A . H 4 HOH 51 369 77 HOH HOH A . H 4 HOH 52 370 80 HOH HOH A . H 4 HOH 53 371 81 HOH HOH A . H 4 HOH 54 372 82 HOH HOH A . H 4 HOH 55 373 83 HOH HOH A . H 4 HOH 56 374 84 HOH HOH A . H 4 HOH 57 375 86 HOH HOH A . H 4 HOH 58 376 87 HOH HOH A . H 4 HOH 59 377 88 HOH HOH A . H 4 HOH 60 378 89 HOH HOH A . H 4 HOH 61 379 90 HOH HOH A . H 4 HOH 62 380 91 HOH HOH A . H 4 HOH 63 381 92 HOH HOH A . H 4 HOH 64 382 93 HOH HOH A . H 4 HOH 65 383 94 HOH HOH A . H 4 HOH 66 384 95 HOH HOH A . H 4 HOH 67 385 97 HOH HOH A . H 4 HOH 68 386 98 HOH HOH A . H 4 HOH 69 387 99 HOH HOH A . H 4 HOH 70 388 100 HOH HOH A . H 4 HOH 71 389 101 HOH HOH A . H 4 HOH 72 390 102 HOH HOH A . H 4 HOH 73 391 103 HOH HOH A . H 4 HOH 74 392 104 HOH HOH A . H 4 HOH 75 393 105 HOH HOH A . H 4 HOH 76 394 106 HOH HOH A . H 4 HOH 77 395 107 HOH HOH A . H 4 HOH 78 396 108 HOH HOH A . H 4 HOH 79 397 109 HOH HOH A . H 4 HOH 80 398 110 HOH HOH A . H 4 HOH 81 399 111 HOH HOH A . H 4 HOH 82 400 112 HOH HOH A . H 4 HOH 83 401 113 HOH HOH A . H 4 HOH 84 402 114 HOH HOH A . H 4 HOH 85 403 115 HOH HOH A . H 4 HOH 86 404 116 HOH HOH A . H 4 HOH 87 405 117 HOH HOH A . H 4 HOH 88 406 118 HOH HOH A . H 4 HOH 89 407 119 HOH HOH A . H 4 HOH 90 408 121 HOH HOH A . H 4 HOH 91 409 122 HOH HOH A . H 4 HOH 92 410 123 HOH HOH A . H 4 HOH 93 411 127 HOH HOH A . H 4 HOH 94 412 128 HOH HOH A . H 4 HOH 95 413 129 HOH HOH A . H 4 HOH 96 414 132 HOH HOH A . H 4 HOH 97 415 134 HOH HOH A . H 4 HOH 98 416 135 HOH HOH A . H 4 HOH 99 417 136 HOH HOH A . H 4 HOH 100 418 137 HOH HOH A . H 4 HOH 101 419 138 HOH HOH A . H 4 HOH 102 420 141 HOH HOH A . H 4 HOH 103 421 142 HOH HOH A . H 4 HOH 104 422 143 HOH HOH A . H 4 HOH 105 423 146 HOH HOH A . H 4 HOH 106 424 148 HOH HOH A . H 4 HOH 107 425 149 HOH HOH A . H 4 HOH 108 426 150 HOH HOH A . H 4 HOH 109 427 151 HOH HOH A . H 4 HOH 110 428 152 HOH HOH A . H 4 HOH 111 429 153 HOH HOH A . H 4 HOH 112 430 154 HOH HOH A . H 4 HOH 113 431 155 HOH HOH A . H 4 HOH 114 432 156 HOH HOH A . H 4 HOH 115 433 157 HOH HOH A . H 4 HOH 116 434 161 HOH HOH A . H 4 HOH 117 435 163 HOH HOH A . H 4 HOH 118 436 166 HOH HOH A . H 4 HOH 119 437 172 HOH HOH A . H 4 HOH 120 438 173 HOH HOH A . H 4 HOH 121 439 174 HOH HOH A . H 4 HOH 122 440 175 HOH HOH A . H 4 HOH 123 441 177 HOH HOH A . H 4 HOH 124 442 178 HOH HOH A . H 4 HOH 125 443 180 HOH HOH A . H 4 HOH 126 444 182 HOH HOH A . H 4 HOH 127 445 183 HOH HOH A . H 4 HOH 128 446 184 HOH HOH A . H 4 HOH 129 447 185 HOH HOH A . H 4 HOH 130 448 187 HOH HOH A . H 4 HOH 131 449 189 HOH HOH A . H 4 HOH 132 450 190 HOH HOH A . H 4 HOH 133 451 192 HOH HOH A . H 4 HOH 134 452 193 HOH HOH A . H 4 HOH 135 453 194 HOH HOH A . H 4 HOH 136 454 195 HOH HOH A . H 4 HOH 137 455 196 HOH HOH A . H 4 HOH 138 456 197 HOH HOH A . H 4 HOH 139 457 198 HOH HOH A . H 4 HOH 140 458 199 HOH HOH A . H 4 HOH 141 459 200 HOH HOH A . H 4 HOH 142 460 201 HOH HOH A . H 4 HOH 143 461 202 HOH HOH A . H 4 HOH 144 462 203 HOH HOH A . H 4 HOH 145 463 204 HOH HOH A . H 4 HOH 146 464 206 HOH HOH A . H 4 HOH 147 465 207 HOH HOH A . H 4 HOH 148 466 208 HOH HOH A . H 4 HOH 149 467 210 HOH HOH A . H 4 HOH 150 468 211 HOH HOH A . H 4 HOH 151 469 213 HOH HOH A . H 4 HOH 152 470 214 HOH HOH A . H 4 HOH 153 471 215 HOH HOH A . H 4 HOH 154 472 218 HOH HOH A . H 4 HOH 155 473 219 HOH HOH A . H 4 HOH 156 474 222 HOH HOH A . H 4 HOH 157 475 223 HOH HOH A . H 4 HOH 158 476 224 HOH HOH A . H 4 HOH 159 477 225 HOH HOH A . H 4 HOH 160 478 226 HOH HOH A . H 4 HOH 161 479 227 HOH HOH A . H 4 HOH 162 480 228 HOH HOH A . H 4 HOH 163 481 230 HOH HOH A . H 4 HOH 164 482 232 HOH HOH A . H 4 HOH 165 483 234 HOH HOH A . H 4 HOH 166 484 238 HOH HOH A . H 4 HOH 167 485 239 HOH HOH A . H 4 HOH 168 486 240 HOH HOH A . H 4 HOH 169 487 241 HOH HOH A . H 4 HOH 170 488 244 HOH HOH A . H 4 HOH 171 489 245 HOH HOH A . H 4 HOH 172 490 246 HOH HOH A . H 4 HOH 173 491 248 HOH HOH A . H 4 HOH 174 492 249 HOH HOH A . H 4 HOH 175 493 250 HOH HOH A . H 4 HOH 176 494 251 HOH HOH A . H 4 HOH 177 495 252 HOH HOH A . H 4 HOH 178 496 253 HOH HOH A . H 4 HOH 179 497 254 HOH HOH A . H 4 HOH 180 498 256 HOH HOH A . H 4 HOH 181 499 257 HOH HOH A . H 4 HOH 182 500 258 HOH HOH A . H 4 HOH 183 501 259 HOH HOH A . H 4 HOH 184 502 260 HOH HOH A . H 4 HOH 185 503 261 HOH HOH A . H 4 HOH 186 504 262 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language DENZO 'data reduction' . ? 1 ? ? ? ? SCALEPACK 'data scaling' . ? 2 ? ? ? ? CNS refinement . ? 3 ? ? ? ? CNS phasing . ? 4 ? ? ? ? # _cell.entry_id 1R3E _cell.length_a 98.862 _cell.length_b 159.337 _cell.length_c 44.545 _cell.angle_alpha 90.00 _cell.angle_beta 97.77 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R3E _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 1R3E _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.36 _exptl_crystal.density_percent_sol 63.41 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, magnesium sulfate, sodium cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'ammonium sulfate' ? ? ? 1 2 1 'magnesium sulfate' ? ? ? 1 3 1 'sodium cacodylate' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'ammonium sulfate' ? ? ? 1 6 2 'magnesium sulfate' ? ? ? 1 7 2 'sodium cacodylate' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-07-05 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Double-crystal _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9730 1.0 2 0.9796 1.0 3 0.9800 1.0 4 1.1271 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9730, 0.9796, 0.9800, 1.1271' # _reflns.entry_id 1R3E _reflns.observed_criterion_sigma_F 1.5 _reflns.observed_criterion_sigma_I 1.5 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 15 _reflns.number_all 39270 _reflns.number_obs 38642 _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R3E _refine.ls_d_res_high 2.1 _refine.ls_d_res_low 15 _refine.pdbx_ls_sigma_F 2.1 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 39270 _refine.ls_number_reflns_obs 38642 _refine.ls_number_reflns_R_free 1159 _refine.ls_percent_reflns_obs 98.4 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.223 _refine.ls_R_factor_R_work 0.223 _refine.ls_R_factor_R_free 0.273 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2459 _refine_hist.pdbx_number_atoms_nucleic_acid 1067 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 263 _refine_hist.number_atoms_total 3789 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 15 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0065 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.36 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1R3E _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1R3E _struct.title ;Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R3E _struct_keywords.pdbx_keywords LYASE/RNA _struct_keywords.text 'RNA modification, pseudouridylation, LYASE-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP TRUB_THEMA Q9WZW0 3 1 ? ? 2 PDB 1R3E 1R3E 1 ? ? ? 3 PDB 1R3E 1R3E 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1R3E A 1 ? 309 ? Q9WZW0 1 ? 309 ? 10 318 2 2 1R3E C 1 ? 17 ? 1R3E 404 ? 420 ? 404 420 3 3 1R3E D 1 ? 17 ? 1R3E 404 ? 420 ? 404 420 4 3 1R3E E 1 ? 17 ? 1R3E 404 ? 420 ? 404 420 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR D 15 ? LEU D 27 ? THR A 24 LEU A 36 1 ? 13 HELX_P HELX_P2 2 GLN D 52 ? LYS D 61 ? GLN A 61 LYS A 70 5 ? 10 HELX_P HELX_P3 3 THR D 95 ? SER D 105 ? THR A 104 SER A 114 1 ? 11 HELX_P HELX_P4 4 LEU D 127 ? GLU D 133 ? LEU A 136 GLU A 142 1 ? 7 HELX_P HELX_P5 5 TYR D 170 ? LEU D 182 ? TYR A 179 LEU A 191 1 ? 13 HELX_P HELX_P6 6 GLU D 202 ? SER D 204 ? GLU A 211 SER A 213 5 ? 3 HELX_P HELX_P7 7 ALA D 211 ? ILE D 219 ? ALA A 220 ILE A 228 1 ? 9 HELX_P HELX_P8 8 GLU D 223 ? CYS D 225 ? GLU A 232 CYS A 234 5 ? 3 HELX_P HELX_P9 9 SER D 238 ? LEU D 243 ? SER A 247 LEU A 252 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? D CYS 92 SG ? ? ? 1_555 D CYS 184 SG ? ? A CYS 101 A CYS 193 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale both ? A U 6 "O3'" ? ? ? 1_555 A FHU 7 P ? ? C U 409 C FHU 410 1_555 ? ? ? ? ? ? ? 1.549 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 17 N1 ? ? C C 404 C G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 17 O6 ? ? C C 404 C G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 17 N2 ? ? C C 404 C G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 N3 ? ? ? 1_555 A A 16 N1 ? ? C U 405 C A 419 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 2 O4 ? ? ? 1_555 A A 16 N6 ? ? C U 405 C A 419 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 15 N3 ? ? C G 406 C C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 15 O2 ? ? C G 406 C C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 15 N4 ? ? C G 406 C C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 14 N1 ? ? C U 407 C A 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 14 N6 ? ? C U 407 C A 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 13 N3 ? ? C G 408 C C 416 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 13 O2 ? ? C G 408 C C 416 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 13 N4 ? ? C G 408 C C 416 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 10 N7 ? ? C U 409 C A 413 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog15 hydrog ? ? A U 6 O2 ? ? ? 1_555 A A 10 N6 ? ? C U 409 C A 413 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog16 hydrog ? ? B C 1 N3 ? ? ? 1_555 C G 17 N1 ? ? D C 404 E G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 1 N4 ? ? ? 1_555 C G 17 O6 ? ? D C 404 E G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C 1 O2 ? ? ? 1_555 C G 17 N2 ? ? D C 404 E G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B U 2 N3 ? ? ? 1_555 C A 16 N1 ? ? D U 405 E A 419 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B U 2 O4 ? ? ? 1_555 C A 16 N6 ? ? D U 405 E A 419 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 3 N1 ? ? ? 1_555 C C 15 N3 ? ? D G 406 E C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 3 N2 ? ? ? 1_555 C C 15 O2 ? ? D G 406 E C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 3 O6 ? ? ? 1_555 C C 15 N4 ? ? D G 406 E C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B U 4 N3 ? ? ? 1_555 C A 14 N1 ? ? D U 407 E A 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B U 4 O4 ? ? ? 1_555 C A 14 N6 ? ? D U 407 E A 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 5 N1 ? ? ? 1_555 C C 13 N3 ? ? D G 408 E C 416 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 5 N2 ? ? ? 1_555 C C 13 O2 ? ? D G 408 E C 416 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 5 O6 ? ? ? 1_555 C C 13 N4 ? ? D G 408 E C 416 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 9 N1 ? ? ? 1_555 C C 12 N3 ? ? D G 412 E C 415 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B G 9 N2 ? ? ? 1_555 C C 12 O2 ? ? D G 412 E C 415 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 9 O6 ? ? ? 1_555 C C 12 N4 ? ? D G 412 E C 415 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B A 10 N1 ? ? ? 1_555 C U 11 N3 ? ? D A 413 E U 414 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B A 10 N6 ? ? ? 1_555 C U 11 O4 ? ? D A 413 E U 414 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B U 11 N3 ? ? ? 1_555 C A 10 N1 ? ? D U 414 E A 413 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B U 11 O4 ? ? ? 1_555 C A 10 N6 ? ? D U 414 E A 413 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B C 12 N3 ? ? ? 1_555 C G 9 N1 ? ? D C 415 E G 412 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B C 12 N4 ? ? ? 1_555 C G 9 O6 ? ? D C 415 E G 412 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B C 12 O2 ? ? ? 1_555 C G 9 N2 ? ? D C 415 E G 412 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B C 13 N3 ? ? ? 1_555 C G 5 N1 ? ? D C 416 E G 408 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B C 13 N4 ? ? ? 1_555 C G 5 O6 ? ? D C 416 E G 408 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B C 13 O2 ? ? ? 1_555 C G 5 N2 ? ? D C 416 E G 408 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B A 14 N1 ? ? ? 1_555 C U 4 N3 ? ? D A 417 E U 407 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B A 14 N6 ? ? ? 1_555 C U 4 O4 ? ? D A 417 E U 407 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B C 15 N3 ? ? ? 1_555 C G 3 N1 ? ? D C 418 E G 406 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B C 15 N4 ? ? ? 1_555 C G 3 O6 ? ? D C 418 E G 406 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B C 15 O2 ? ? ? 1_555 C G 3 N2 ? ? D C 418 E G 406 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B A 16 N1 ? ? ? 1_555 C U 2 N3 ? ? D A 419 E U 405 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B A 16 N6 ? ? ? 1_555 C U 2 O4 ? ? D A 419 E U 405 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B G 17 N1 ? ? ? 1_555 C C 1 N3 ? ? D G 420 E C 404 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B G 17 N2 ? ? ? 1_555 C C 1 O2 ? ? D G 420 E C 404 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B G 17 O6 ? ? ? 1_555 C C 1 N4 ? ? D G 420 E C 404 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? hydrog ? ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id D _pdbx_modification_feature.label_seq_id 92 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id D _pdbx_modification_feature.modified_residue_label_seq_id 184 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 101 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 193 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 2 ? D ? 2 ? E ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? parallel E 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL D 32 ? HIS D 34 ? VAL A 41 HIS A 43 A 2 CYS D 43 ? VAL D 50 ? CYS A 52 VAL A 59 A 3 ALA D 186 ? VAL D 196 ? ALA A 195 VAL A 205 A 4 HIS D 199 ? THR D 200 ? HIS A 208 THR A 209 B 1 GLY D 108 ? GLN D 112 ? GLY A 117 GLN A 121 B 2 LYS D 142 ? GLU D 155 ? LYS A 151 GLU A 164 B 3 ASP D 158 ? VAL D 165 ? ASP A 167 VAL A 174 B 4 LYS D 65 ? LEU D 73 ? LYS A 74 LEU A 82 B 5 ALA D 186 ? VAL D 196 ? ALA A 195 VAL A 205 B 6 CYS D 43 ? VAL D 50 ? CYS A 52 VAL A 59 B 7 GLY D 4 ? LYS D 10 ? GLY A 13 LYS A 19 B 8 ILE D 220 ? PRO D 221 ? ILE A 229 PRO A 230 C 1 LEU D 75 ? THR D 77 ? LEU A 84 THR A 86 C 2 VAL D 86 ? GLU D 89 ? VAL A 95 GLU A 98 D 1 LYS D 121 ? TYR D 122 ? LYS A 130 TYR A 131 D 2 GLU D 125 ? ARG D 126 ? GLU A 134 ARG A 135 E 1 ILE D 248 ? HIS D 249 ? ILE A 257 HIS A 258 E 2 ARG D 298 ? VAL D 305 ? ARG A 307 VAL A 314 E 3 LEU D 274 ? ALA D 280 ? LEU A 283 ALA A 289 E 4 VAL D 264 ? PHE D 268 ? VAL A 273 PHE A 277 E 5 ARG D 231 ? VAL D 233 ? ARG A 240 VAL A 242 E 6 GLU D 255 ? TRP D 256 ? GLU A 264 TRP A 265 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY D 33 ? N GLY A 42 O GLY D 49 ? O GLY A 58 A 2 3 N CYS D 43 ? N CYS A 52 O ARG D 193 ? O ARG A 202 A 3 4 N VAL D 196 ? N VAL A 205 O HIS D 199 ? O HIS A 208 B 1 2 N TYR D 110 ? N TYR A 119 O VAL D 144 ? O VAL A 153 B 2 3 N TRP D 150 ? N TRP A 159 O ARG D 162 ? O ARG A 171 B 3 4 O VAL D 159 ? O VAL A 168 N MET D 71 ? N MET A 80 B 4 5 N LYS D 70 ? N LYS A 79 O VAL D 189 ? O VAL A 198 B 5 6 O ARG D 193 ? O ARG A 202 N CYS D 43 ? N CYS A 52 B 6 7 O ILE D 48 ? O ILE A 57 N LEU D 6 ? N LEU A 15 B 7 8 N ILE D 5 ? N ILE A 14 O ILE D 220 ? O ILE A 229 C 1 2 N ILE D 76 ? N ILE A 85 O VAL D 87 ? O VAL A 96 D 1 2 N TYR D 122 ? N TYR A 131 O GLU D 125 ? O GLU A 134 E 1 2 N ILE D 248 ? N ILE A 257 O VAL D 299 ? O VAL A 308 E 2 3 O THR D 301 ? O THR A 310 N GLU D 279 ? N GLU A 288 E 3 4 O ALA D 278 ? O ALA A 287 N VAL D 265 ? N VAL A 274 E 4 5 O PHE D 268 ? O PHE A 277 N VAL D 232 ? N VAL A 241 E 5 6 N VAL D 233 ? N VAL A 242 O GLU D 255 ? O GLU A 264 # _pdbx_entry_details.entry_id 1R3E _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C HOH 29 ? ? O A HOH 373 ? ? 1.68 2 1 O A LEU 299 ? ? NE A ARG 300 ? ? 1.75 3 1 OE1 A GLU 290 ? ? OG1 A THR 310 ? ? 1.95 4 1 O A ALA 51 ? ? O A HOH 408 ? ? 2.04 5 1 O C HOH 29 ? ? O C HOH 125 ? ? 2.04 6 1 O C HOH 133 ? ? O A HOH 337 ? ? 2.11 7 1 O A ASP 48 ? ? O A HOH 408 ? ? 2.13 8 1 O C HOH 125 ? ? O A HOH 373 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 388 ? ? 1_555 O A HOH 480 ? ? 2_656 0.17 2 1 O C HOH 205 ? ? 1_555 O C HOH 212 ? ? 2_656 0.51 3 1 O C HOH 133 ? ? 1_555 O C HOH 247 ? ? 2_656 0.65 4 1 O C HOH 41 ? ? 1_555 O C HOH 41 ? ? 2_655 1.99 5 1 N3 C U 414 ? ? 1_555 N3 C U 414 ? ? 2_656 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C2'" D A 419 ? ? "O2'" D A 419 ? ? 1.278 1.412 -0.134 0.013 N 2 1 N7 D A 419 ? ? C8 D A 419 ? ? 1.357 1.311 0.046 0.007 N 3 1 NE1 A TRP 77 ? ? CE2 A TRP 77 ? ? 1.485 1.371 0.114 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" C U 409 ? ? P C FHU 410 ? ? "O5'" C FHU 410 ? ? 126.25 104.00 22.25 1.90 Y 2 1 "O3'" C U 409 ? ? P C FHU 410 ? ? OP1 C FHU 410 ? ? 83.52 105.20 -21.68 2.20 Y 3 1 "C1'" D A 419 ? ? "C2'" D A 419 ? ? "O2'" D A 419 ? ? 136.11 110.60 25.51 3.00 N 4 1 "C3'" D A 419 ? ? "C2'" D A 419 ? ? "O2'" D A 419 ? ? 80.04 113.30 -33.26 2.90 N 5 1 N1 D A 419 ? ? C2 D A 419 ? ? N3 D A 419 ? ? 125.00 129.30 -4.30 0.50 N 6 1 C2 D A 419 ? ? N3 D A 419 ? ? C4 D A 419 ? ? 116.87 110.60 6.27 0.50 N 7 1 N3 D A 419 ? ? C4 D A 419 ? ? C5 D A 419 ? ? 121.52 126.80 -5.28 0.70 N 8 1 C5 D A 419 ? ? C6 D A 419 ? ? N1 D A 419 ? ? 122.64 117.70 4.94 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 60 ? ? 50.04 -128.05 2 1 GLU A 105 ? ? -29.55 -32.24 3 1 LYS A 157 ? ? -170.38 147.34 4 1 GLU A 164 ? ? 177.44 100.31 5 1 CYS A 193 ? ? -164.54 -2.01 6 1 GLN A 245 ? ? -46.34 -3.24 7 1 LEU A 252 ? ? -59.14 -8.97 8 1 LEU A 262 ? ? -165.14 -149.39 9 1 LYS A 263 ? ? 164.26 -88.12 10 1 PHE A 268 ? ? -163.99 114.55 11 1 LYS A 270 ? ? -38.95 136.12 12 1 GLU A 279 ? ? 57.23 -7.57 13 1 SER A 294 ? ? -168.12 -18.15 14 1 LEU A 299 ? ? -48.41 -1.32 15 1 ARG A 300 ? ? -149.22 -116.05 16 1 ARG A 307 ? ? -14.16 115.83 17 1 VAL A 308 ? ? -137.76 -58.57 18 1 THR A 317 ? ? 31.70 97.50 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G C 408 ? ? 0.053 'SIDE CHAIN' 2 1 G D 408 ? ? 0.074 'SIDE CHAIN' # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 "O3'" _pdbx_validate_polymer_linkage.auth_asym_id_1 C _pdbx_validate_polymer_linkage.auth_comp_id_1 FHU _pdbx_validate_polymer_linkage.auth_seq_id_1 410 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 P _pdbx_validate_polymer_linkage.auth_asym_id_2 C _pdbx_validate_polymer_linkage.auth_comp_id_2 C _pdbx_validate_polymer_linkage.auth_seq_id_2 411 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.98 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id FHU _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id FHU _pdbx_struct_mod_residue.auth_seq_id 410 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id U _pdbx_struct_mod_residue.details ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 386 ? H HOH . 2 1 A HOH 494 ? H HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 302 ? D HIS 293 2 1 Y 1 A GLU 303 ? D GLU 294 3 1 Y 1 A ARG 304 ? D ARG 295 4 1 Y 1 A ASN 305 ? D ASN 296 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 FHU N1 N N N 160 FHU C2 C N N 161 FHU N3 N N N 162 FHU C4 C N N 163 FHU C5 C N S 164 FHU C6 C N R 165 FHU O2 O N N 166 FHU O4 O N N 167 FHU "C1'" C N R 168 FHU "C2'" C N R 169 FHU "O2'" O N N 170 FHU "C3'" C N S 171 FHU "C4'" C N R 172 FHU "O3'" O N N 173 FHU "O4'" O N N 174 FHU "C5'" C N N 175 FHU "O5'" O N N 176 FHU P P N N 177 FHU OP1 O N N 178 FHU OP2 O N N 179 FHU OP3 O N N 180 FHU F5 F N N 181 FHU O6 O N N 182 FHU HN1 H N N 183 FHU HN3 H N N 184 FHU H6 H N N 185 FHU "H1'" H N N 186 FHU "H2'" H N N 187 FHU "HO2'" H N N 188 FHU "H3'" H N N 189 FHU "H4'" H N N 190 FHU "HO3'" H N N 191 FHU "H5'" H N N 192 FHU "H5''" H N N 193 FHU HOP2 H N N 194 FHU HOP3 H N N 195 FHU HO6 H N N 196 G OP3 O N N 197 G P P N N 198 G OP1 O N N 199 G OP2 O N N 200 G "O5'" O N N 201 G "C5'" C N N 202 G "C4'" C N R 203 G "O4'" O N N 204 G "C3'" C N S 205 G "O3'" O N N 206 G "C2'" C N R 207 G "O2'" O N N 208 G "C1'" C N R 209 G N9 N Y N 210 G C8 C Y N 211 G N7 N Y N 212 G C5 C Y N 213 G C6 C N N 214 G O6 O N N 215 G N1 N N N 216 G C2 C N N 217 G N2 N N N 218 G N3 N N N 219 G C4 C Y N 220 G HOP3 H N N 221 G HOP2 H N N 222 G "H5'" H N N 223 G "H5''" H N N 224 G "H4'" H N N 225 G "H3'" H N N 226 G "HO3'" H N N 227 G "H2'" H N N 228 G "HO2'" H N N 229 G "H1'" H N N 230 G H8 H N N 231 G H1 H N N 232 G H21 H N N 233 G H22 H N N 234 GLN N N N N 235 GLN CA C N S 236 GLN C C N N 237 GLN O O N N 238 GLN CB C N N 239 GLN CG C N N 240 GLN CD C N N 241 GLN OE1 O N N 242 GLN NE2 N N N 243 GLN OXT O N N 244 GLN H H N N 245 GLN H2 H N N 246 GLN HA H N N 247 GLN HB2 H N N 248 GLN HB3 H N N 249 GLN HG2 H N N 250 GLN HG3 H N N 251 GLN HE21 H N N 252 GLN HE22 H N N 253 GLN HXT H N N 254 GLU N N N N 255 GLU CA C N S 256 GLU C C N N 257 GLU O O N N 258 GLU CB C N N 259 GLU CG C N N 260 GLU CD C N N 261 GLU OE1 O N N 262 GLU OE2 O N N 263 GLU OXT O N N 264 GLU H H N N 265 GLU H2 H N N 266 GLU HA H N N 267 GLU HB2 H N N 268 GLU HB3 H N N 269 GLU HG2 H N N 270 GLU HG3 H N N 271 GLU HE2 H N N 272 GLU HXT H N N 273 GLY N N N N 274 GLY CA C N N 275 GLY C C N N 276 GLY O O N N 277 GLY OXT O N N 278 GLY H H N N 279 GLY H2 H N N 280 GLY HA2 H N N 281 GLY HA3 H N N 282 GLY HXT H N N 283 HIS N N N N 284 HIS CA C N S 285 HIS C C N N 286 HIS O O N N 287 HIS CB C N N 288 HIS CG C Y N 289 HIS ND1 N Y N 290 HIS CD2 C Y N 291 HIS CE1 C Y N 292 HIS NE2 N Y N 293 HIS OXT O N N 294 HIS H H N N 295 HIS H2 H N N 296 HIS HA H N N 297 HIS HB2 H N N 298 HIS HB3 H N N 299 HIS HD1 H N N 300 HIS HD2 H N N 301 HIS HE1 H N N 302 HIS HE2 H N N 303 HIS HXT H N N 304 HOH O O N N 305 HOH H1 H N N 306 HOH H2 H N N 307 ILE N N N N 308 ILE CA C N S 309 ILE C C N N 310 ILE O O N N 311 ILE CB C N S 312 ILE CG1 C N N 313 ILE CG2 C N N 314 ILE CD1 C N N 315 ILE OXT O N N 316 ILE H H N N 317 ILE H2 H N N 318 ILE HA H N N 319 ILE HB H N N 320 ILE HG12 H N N 321 ILE HG13 H N N 322 ILE HG21 H N N 323 ILE HG22 H N N 324 ILE HG23 H N N 325 ILE HD11 H N N 326 ILE HD12 H N N 327 ILE HD13 H N N 328 ILE HXT H N N 329 LEU N N N N 330 LEU CA C N S 331 LEU C C N N 332 LEU O O N N 333 LEU CB C N N 334 LEU CG C N N 335 LEU CD1 C N N 336 LEU CD2 C N N 337 LEU OXT O N N 338 LEU H H N N 339 LEU H2 H N N 340 LEU HA H N N 341 LEU HB2 H N N 342 LEU HB3 H N N 343 LEU HG H N N 344 LEU HD11 H N N 345 LEU HD12 H N N 346 LEU HD13 H N N 347 LEU HD21 H N N 348 LEU HD22 H N N 349 LEU HD23 H N N 350 LEU HXT H N N 351 LYS N N N N 352 LYS CA C N S 353 LYS C C N N 354 LYS O O N N 355 LYS CB C N N 356 LYS CG C N N 357 LYS CD C N N 358 LYS CE C N N 359 LYS NZ N N N 360 LYS OXT O N N 361 LYS H H N N 362 LYS H2 H N N 363 LYS HA H N N 364 LYS HB2 H N N 365 LYS HB3 H N N 366 LYS HG2 H N N 367 LYS HG3 H N N 368 LYS HD2 H N N 369 LYS HD3 H N N 370 LYS HE2 H N N 371 LYS HE3 H N N 372 LYS HZ1 H N N 373 LYS HZ2 H N N 374 LYS HZ3 H N N 375 LYS HXT H N N 376 MET N N N N 377 MET CA C N S 378 MET C C N N 379 MET O O N N 380 MET CB C N N 381 MET CG C N N 382 MET SD S N N 383 MET CE C N N 384 MET OXT O N N 385 MET H H N N 386 MET H2 H N N 387 MET HA H N N 388 MET HB2 H N N 389 MET HB3 H N N 390 MET HG2 H N N 391 MET HG3 H N N 392 MET HE1 H N N 393 MET HE2 H N N 394 MET HE3 H N N 395 MET HXT H N N 396 PHE N N N N 397 PHE CA C N S 398 PHE C C N N 399 PHE O O N N 400 PHE CB C N N 401 PHE CG C Y N 402 PHE CD1 C Y N 403 PHE CD2 C Y N 404 PHE CE1 C Y N 405 PHE CE2 C Y N 406 PHE CZ C Y N 407 PHE OXT O N N 408 PHE H H N N 409 PHE H2 H N N 410 PHE HA H N N 411 PHE HB2 H N N 412 PHE HB3 H N N 413 PHE HD1 H N N 414 PHE HD2 H N N 415 PHE HE1 H N N 416 PHE HE2 H N N 417 PHE HZ H N N 418 PHE HXT H N N 419 PRO N N N N 420 PRO CA C N S 421 PRO C C N N 422 PRO O O N N 423 PRO CB C N N 424 PRO CG C N N 425 PRO CD C N N 426 PRO OXT O N N 427 PRO H H N N 428 PRO HA H N N 429 PRO HB2 H N N 430 PRO HB3 H N N 431 PRO HG2 H N N 432 PRO HG3 H N N 433 PRO HD2 H N N 434 PRO HD3 H N N 435 PRO HXT H N N 436 SER N N N N 437 SER CA C N S 438 SER C C N N 439 SER O O N N 440 SER CB C N N 441 SER OG O N N 442 SER OXT O N N 443 SER H H N N 444 SER H2 H N N 445 SER HA H N N 446 SER HB2 H N N 447 SER HB3 H N N 448 SER HG H N N 449 SER HXT H N N 450 THR N N N N 451 THR CA C N S 452 THR C C N N 453 THR O O N N 454 THR CB C N R 455 THR OG1 O N N 456 THR CG2 C N N 457 THR OXT O N N 458 THR H H N N 459 THR H2 H N N 460 THR HA H N N 461 THR HB H N N 462 THR HG1 H N N 463 THR HG21 H N N 464 THR HG22 H N N 465 THR HG23 H N N 466 THR HXT H N N 467 TRP N N N N 468 TRP CA C N S 469 TRP C C N N 470 TRP O O N N 471 TRP CB C N N 472 TRP CG C Y N 473 TRP CD1 C Y N 474 TRP CD2 C Y N 475 TRP NE1 N Y N 476 TRP CE2 C Y N 477 TRP CE3 C Y N 478 TRP CZ2 C Y N 479 TRP CZ3 C Y N 480 TRP CH2 C Y N 481 TRP OXT O N N 482 TRP H H N N 483 TRP H2 H N N 484 TRP HA H N N 485 TRP HB2 H N N 486 TRP HB3 H N N 487 TRP HD1 H N N 488 TRP HE1 H N N 489 TRP HE3 H N N 490 TRP HZ2 H N N 491 TRP HZ3 H N N 492 TRP HH2 H N N 493 TRP HXT H N N 494 TYR N N N N 495 TYR CA C N S 496 TYR C C N N 497 TYR O O N N 498 TYR CB C N N 499 TYR CG C Y N 500 TYR CD1 C Y N 501 TYR CD2 C Y N 502 TYR CE1 C Y N 503 TYR CE2 C Y N 504 TYR CZ C Y N 505 TYR OH O N N 506 TYR OXT O N N 507 TYR H H N N 508 TYR H2 H N N 509 TYR HA H N N 510 TYR HB2 H N N 511 TYR HB3 H N N 512 TYR HD1 H N N 513 TYR HD2 H N N 514 TYR HE1 H N N 515 TYR HE2 H N N 516 TYR HH H N N 517 TYR HXT H N N 518 U OP3 O N N 519 U P P N N 520 U OP1 O N N 521 U OP2 O N N 522 U "O5'" O N N 523 U "C5'" C N N 524 U "C4'" C N R 525 U "O4'" O N N 526 U "C3'" C N S 527 U "O3'" O N N 528 U "C2'" C N R 529 U "O2'" O N N 530 U "C1'" C N R 531 U N1 N N N 532 U C2 C N N 533 U O2 O N N 534 U N3 N N N 535 U C4 C N N 536 U O4 O N N 537 U C5 C N N 538 U C6 C N N 539 U HOP3 H N N 540 U HOP2 H N N 541 U "H5'" H N N 542 U "H5''" H N N 543 U "H4'" H N N 544 U "H3'" H N N 545 U "HO3'" H N N 546 U "H2'" H N N 547 U "HO2'" H N N 548 U "H1'" H N N 549 U H3 H N N 550 U H5 H N N 551 U H6 H N N 552 VAL N N N N 553 VAL CA C N S 554 VAL C C N N 555 VAL O O N N 556 VAL CB C N N 557 VAL CG1 C N N 558 VAL CG2 C N N 559 VAL OXT O N N 560 VAL H H N N 561 VAL H2 H N N 562 VAL HA H N N 563 VAL HB H N N 564 VAL HG11 H N N 565 VAL HG12 H N N 566 VAL HG13 H N N 567 VAL HG21 H N N 568 VAL HG22 H N N 569 VAL HG23 H N N 570 VAL HXT H N N 571 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 FHU N1 C2 sing N N 158 FHU N1 C6 sing N N 159 FHU N1 HN1 sing N N 160 FHU C2 N3 sing N N 161 FHU C2 O2 doub N N 162 FHU N3 C4 sing N N 163 FHU N3 HN3 sing N N 164 FHU C4 C5 sing N N 165 FHU C4 O4 doub N N 166 FHU C5 C6 sing N N 167 FHU C5 "C1'" sing N N 168 FHU C5 F5 sing N N 169 FHU C6 O6 sing N N 170 FHU C6 H6 sing N N 171 FHU "C1'" "C2'" sing N N 172 FHU "C1'" "O4'" sing N N 173 FHU "C1'" "H1'" sing N N 174 FHU "C2'" "O2'" sing N N 175 FHU "C2'" "C3'" sing N N 176 FHU "C2'" "H2'" sing N N 177 FHU "O2'" "HO2'" sing N N 178 FHU "C3'" "C4'" sing N N 179 FHU "C3'" "O3'" sing N N 180 FHU "C3'" "H3'" sing N N 181 FHU "C4'" "O4'" sing N N 182 FHU "C4'" "C5'" sing N N 183 FHU "C4'" "H4'" sing N N 184 FHU "O3'" "HO3'" sing N N 185 FHU "C5'" "O5'" sing N N 186 FHU "C5'" "H5'" sing N N 187 FHU "C5'" "H5''" sing N N 188 FHU "O5'" P sing N N 189 FHU P OP1 doub N N 190 FHU P OP2 sing N N 191 FHU P OP3 sing N N 192 FHU OP2 HOP2 sing N N 193 FHU OP3 HOP3 sing N N 194 FHU O6 HO6 sing N N 195 G OP3 P sing N N 196 G OP3 HOP3 sing N N 197 G P OP1 doub N N 198 G P OP2 sing N N 199 G P "O5'" sing N N 200 G OP2 HOP2 sing N N 201 G "O5'" "C5'" sing N N 202 G "C5'" "C4'" sing N N 203 G "C5'" "H5'" sing N N 204 G "C5'" "H5''" sing N N 205 G "C4'" "O4'" sing N N 206 G "C4'" "C3'" sing N N 207 G "C4'" "H4'" sing N N 208 G "O4'" "C1'" sing N N 209 G "C3'" "O3'" sing N N 210 G "C3'" "C2'" sing N N 211 G "C3'" "H3'" sing N N 212 G "O3'" "HO3'" sing N N 213 G "C2'" "O2'" sing N N 214 G "C2'" "C1'" sing N N 215 G "C2'" "H2'" sing N N 216 G "O2'" "HO2'" sing N N 217 G "C1'" N9 sing N N 218 G "C1'" "H1'" sing N N 219 G N9 C8 sing Y N 220 G N9 C4 sing Y N 221 G C8 N7 doub Y N 222 G C8 H8 sing N N 223 G N7 C5 sing Y N 224 G C5 C6 sing N N 225 G C5 C4 doub Y N 226 G C6 O6 doub N N 227 G C6 N1 sing N N 228 G N1 C2 sing N N 229 G N1 H1 sing N N 230 G C2 N2 sing N N 231 G C2 N3 doub N N 232 G N2 H21 sing N N 233 G N2 H22 sing N N 234 G N3 C4 sing N N 235 GLN N CA sing N N 236 GLN N H sing N N 237 GLN N H2 sing N N 238 GLN CA C sing N N 239 GLN CA CB sing N N 240 GLN CA HA sing N N 241 GLN C O doub N N 242 GLN C OXT sing N N 243 GLN CB CG sing N N 244 GLN CB HB2 sing N N 245 GLN CB HB3 sing N N 246 GLN CG CD sing N N 247 GLN CG HG2 sing N N 248 GLN CG HG3 sing N N 249 GLN CD OE1 doub N N 250 GLN CD NE2 sing N N 251 GLN NE2 HE21 sing N N 252 GLN NE2 HE22 sing N N 253 GLN OXT HXT sing N N 254 GLU N CA sing N N 255 GLU N H sing N N 256 GLU N H2 sing N N 257 GLU CA C sing N N 258 GLU CA CB sing N N 259 GLU CA HA sing N N 260 GLU C O doub N N 261 GLU C OXT sing N N 262 GLU CB CG sing N N 263 GLU CB HB2 sing N N 264 GLU CB HB3 sing N N 265 GLU CG CD sing N N 266 GLU CG HG2 sing N N 267 GLU CG HG3 sing N N 268 GLU CD OE1 doub N N 269 GLU CD OE2 sing N N 270 GLU OE2 HE2 sing N N 271 GLU OXT HXT sing N N 272 GLY N CA sing N N 273 GLY N H sing N N 274 GLY N H2 sing N N 275 GLY CA C sing N N 276 GLY CA HA2 sing N N 277 GLY CA HA3 sing N N 278 GLY C O doub N N 279 GLY C OXT sing N N 280 GLY OXT HXT sing N N 281 HIS N CA sing N N 282 HIS N H sing N N 283 HIS N H2 sing N N 284 HIS CA C sing N N 285 HIS CA CB sing N N 286 HIS CA HA sing N N 287 HIS C O doub N N 288 HIS C OXT sing N N 289 HIS CB CG sing N N 290 HIS CB HB2 sing N N 291 HIS CB HB3 sing N N 292 HIS CG ND1 sing Y N 293 HIS CG CD2 doub Y N 294 HIS ND1 CE1 doub Y N 295 HIS ND1 HD1 sing N N 296 HIS CD2 NE2 sing Y N 297 HIS CD2 HD2 sing N N 298 HIS CE1 NE2 sing Y N 299 HIS CE1 HE1 sing N N 300 HIS NE2 HE2 sing N N 301 HIS OXT HXT sing N N 302 HOH O H1 sing N N 303 HOH O H2 sing N N 304 ILE N CA sing N N 305 ILE N H sing N N 306 ILE N H2 sing N N 307 ILE CA C sing N N 308 ILE CA CB sing N N 309 ILE CA HA sing N N 310 ILE C O doub N N 311 ILE C OXT sing N N 312 ILE CB CG1 sing N N 313 ILE CB CG2 sing N N 314 ILE CB HB sing N N 315 ILE CG1 CD1 sing N N 316 ILE CG1 HG12 sing N N 317 ILE CG1 HG13 sing N N 318 ILE CG2 HG21 sing N N 319 ILE CG2 HG22 sing N N 320 ILE CG2 HG23 sing N N 321 ILE CD1 HD11 sing N N 322 ILE CD1 HD12 sing N N 323 ILE CD1 HD13 sing N N 324 ILE OXT HXT sing N N 325 LEU N CA sing N N 326 LEU N H sing N N 327 LEU N H2 sing N N 328 LEU CA C sing N N 329 LEU CA CB sing N N 330 LEU CA HA sing N N 331 LEU C O doub N N 332 LEU C OXT sing N N 333 LEU CB CG sing N N 334 LEU CB HB2 sing N N 335 LEU CB HB3 sing N N 336 LEU CG CD1 sing N N 337 LEU CG CD2 sing N N 338 LEU CG HG sing N N 339 LEU CD1 HD11 sing N N 340 LEU CD1 HD12 sing N N 341 LEU CD1 HD13 sing N N 342 LEU CD2 HD21 sing N N 343 LEU CD2 HD22 sing N N 344 LEU CD2 HD23 sing N N 345 LEU OXT HXT sing N N 346 LYS N CA sing N N 347 LYS N H sing N N 348 LYS N H2 sing N N 349 LYS CA C sing N N 350 LYS CA CB sing N N 351 LYS CA HA sing N N 352 LYS C O doub N N 353 LYS C OXT sing N N 354 LYS CB CG sing N N 355 LYS CB HB2 sing N N 356 LYS CB HB3 sing N N 357 LYS CG CD sing N N 358 LYS CG HG2 sing N N 359 LYS CG HG3 sing N N 360 LYS CD CE sing N N 361 LYS CD HD2 sing N N 362 LYS CD HD3 sing N N 363 LYS CE NZ sing N N 364 LYS CE HE2 sing N N 365 LYS CE HE3 sing N N 366 LYS NZ HZ1 sing N N 367 LYS NZ HZ2 sing N N 368 LYS NZ HZ3 sing N N 369 LYS OXT HXT sing N N 370 MET N CA sing N N 371 MET N H sing N N 372 MET N H2 sing N N 373 MET CA C sing N N 374 MET CA CB sing N N 375 MET CA HA sing N N 376 MET C O doub N N 377 MET C OXT sing N N 378 MET CB CG sing N N 379 MET CB HB2 sing N N 380 MET CB HB3 sing N N 381 MET CG SD sing N N 382 MET CG HG2 sing N N 383 MET CG HG3 sing N N 384 MET SD CE sing N N 385 MET CE HE1 sing N N 386 MET CE HE2 sing N N 387 MET CE HE3 sing N N 388 MET OXT HXT sing N N 389 PHE N CA sing N N 390 PHE N H sing N N 391 PHE N H2 sing N N 392 PHE CA C sing N N 393 PHE CA CB sing N N 394 PHE CA HA sing N N 395 PHE C O doub N N 396 PHE C OXT sing N N 397 PHE CB CG sing N N 398 PHE CB HB2 sing N N 399 PHE CB HB3 sing N N 400 PHE CG CD1 doub Y N 401 PHE CG CD2 sing Y N 402 PHE CD1 CE1 sing Y N 403 PHE CD1 HD1 sing N N 404 PHE CD2 CE2 doub Y N 405 PHE CD2 HD2 sing N N 406 PHE CE1 CZ doub Y N 407 PHE CE1 HE1 sing N N 408 PHE CE2 CZ sing Y N 409 PHE CE2 HE2 sing N N 410 PHE CZ HZ sing N N 411 PHE OXT HXT sing N N 412 PRO N CA sing N N 413 PRO N CD sing N N 414 PRO N H sing N N 415 PRO CA C sing N N 416 PRO CA CB sing N N 417 PRO CA HA sing N N 418 PRO C O doub N N 419 PRO C OXT sing N N 420 PRO CB CG sing N N 421 PRO CB HB2 sing N N 422 PRO CB HB3 sing N N 423 PRO CG CD sing N N 424 PRO CG HG2 sing N N 425 PRO CG HG3 sing N N 426 PRO CD HD2 sing N N 427 PRO CD HD3 sing N N 428 PRO OXT HXT sing N N 429 SER N CA sing N N 430 SER N H sing N N 431 SER N H2 sing N N 432 SER CA C sing N N 433 SER CA CB sing N N 434 SER CA HA sing N N 435 SER C O doub N N 436 SER C OXT sing N N 437 SER CB OG sing N N 438 SER CB HB2 sing N N 439 SER CB HB3 sing N N 440 SER OG HG sing N N 441 SER OXT HXT sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TRP N CA sing N N 459 TRP N H sing N N 460 TRP N H2 sing N N 461 TRP CA C sing N N 462 TRP CA CB sing N N 463 TRP CA HA sing N N 464 TRP C O doub N N 465 TRP C OXT sing N N 466 TRP CB CG sing N N 467 TRP CB HB2 sing N N 468 TRP CB HB3 sing N N 469 TRP CG CD1 doub Y N 470 TRP CG CD2 sing Y N 471 TRP CD1 NE1 sing Y N 472 TRP CD1 HD1 sing N N 473 TRP CD2 CE2 doub Y N 474 TRP CD2 CE3 sing Y N 475 TRP NE1 CE2 sing Y N 476 TRP NE1 HE1 sing N N 477 TRP CE2 CZ2 sing Y N 478 TRP CE3 CZ3 doub Y N 479 TRP CE3 HE3 sing N N 480 TRP CZ2 CH2 doub Y N 481 TRP CZ2 HZ2 sing N N 482 TRP CZ3 CH2 sing Y N 483 TRP CZ3 HZ3 sing N N 484 TRP CH2 HH2 sing N N 485 TRP OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 U OP3 P sing N N 511 U OP3 HOP3 sing N N 512 U P OP1 doub N N 513 U P OP2 sing N N 514 U P "O5'" sing N N 515 U OP2 HOP2 sing N N 516 U "O5'" "C5'" sing N N 517 U "C5'" "C4'" sing N N 518 U "C5'" "H5'" sing N N 519 U "C5'" "H5''" sing N N 520 U "C4'" "O4'" sing N N 521 U "C4'" "C3'" sing N N 522 U "C4'" "H4'" sing N N 523 U "O4'" "C1'" sing N N 524 U "C3'" "O3'" sing N N 525 U "C3'" "C2'" sing N N 526 U "C3'" "H3'" sing N N 527 U "O3'" "HO3'" sing N N 528 U "C2'" "O2'" sing N N 529 U "C2'" "C1'" sing N N 530 U "C2'" "H2'" sing N N 531 U "O2'" "HO2'" sing N N 532 U "C1'" N1 sing N N 533 U "C1'" "H1'" sing N N 534 U N1 C2 sing N N 535 U N1 C6 sing N N 536 U C2 O2 doub N N 537 U C2 N3 sing N N 538 U N3 C4 sing N N 539 U N3 H3 sing N N 540 U C4 O4 doub N N 541 U C4 C5 sing N N 542 U C5 C6 doub N N 543 U C5 H5 sing N N 544 U C6 H6 sing N N 545 VAL N CA sing N N 546 VAL N H sing N N 547 VAL N H2 sing N N 548 VAL CA C sing N N 549 VAL CA CB sing N N 550 VAL CA HA sing N N 551 VAL C O doub N N 552 VAL C OXT sing N N 553 VAL CB CG1 sing N N 554 VAL CB CG2 sing N N 555 VAL CB HB sing N N 556 VAL CG1 HG11 sing N N 557 VAL CG1 HG12 sing N N 558 VAL CG1 HG13 sing N N 559 VAL CG2 HG21 sing N N 560 VAL CG2 HG22 sing N N 561 VAL CG2 HG23 sing N N 562 VAL OXT HXT sing N N 563 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1R3E 'double helix' 1R3E 'a-form double helix' 1R3E 'hairpin loop' 1R3E 'bulge loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 10 1_555 A U 6 1_555 -4.169 -1.984 0.010 -14.839 -5.465 -100.089 1 C_A413:U409_C C 413 ? C 409 ? 24 4 1 A C 13 1_555 A G 5 1_555 0.198 -0.055 0.273 5.929 -10.737 -2.147 2 C_C416:G408_C C 416 ? C 408 ? 19 1 1 A A 14 1_555 A U 4 1_555 0.005 -0.132 0.464 9.622 -13.453 0.404 3 C_A417:U407_C C 417 ? C 407 ? 20 1 1 A C 15 1_555 A G 3 1_555 0.152 -0.281 0.128 9.002 -17.693 -1.579 4 C_C418:G406_C C 418 ? C 406 ? 19 1 1 A A 16 1_555 A U 2 1_555 -0.132 -0.174 0.363 1.064 -14.626 -1.159 5 C_A419:U405_C C 419 ? C 405 ? 20 1 1 A G 17 1_555 A C 1 1_555 -0.279 -0.434 0.099 -1.853 -17.174 2.155 6 C_G420:C404_C C 420 ? C 404 ? 19 1 1 C C 1 1_555 B G 17 1_555 -0.013 0.015 0.186 -1.007 -18.449 3.933 7 E_C404:G420_D E 404 ? D 420 ? 19 1 1 C U 2 1_555 B A 16 1_555 -0.238 -0.304 0.347 -2.942 -17.875 2.382 8 E_U405:A419_D E 405 ? D 419 ? 20 1 1 C G 3 1_555 B C 15 1_555 -0.390 -0.281 -0.011 -4.472 -15.576 0.277 9 E_G406:C418_D E 406 ? D 418 ? 19 1 1 C U 4 1_555 B A 14 1_555 -0.181 -0.319 0.325 -10.394 -12.440 -0.445 10 E_U407:A417_D E 407 ? D 417 ? 20 1 1 C G 5 1_555 B C 13 1_555 0.283 -0.382 0.005 0.123 -6.732 -3.280 11 E_G408:C416_D E 408 ? D 416 ? 19 1 1 C G 9 1_555 B C 12 1_555 0.155 -0.162 -0.169 -4.684 -5.184 -7.104 12 E_G412:C415_D E 412 ? D 415 ? 19 1 1 C A 10 1_555 B U 11 1_555 -0.101 -0.135 0.104 -6.287 -4.026 7.121 13 E_A413:U414_D E 413 ? D 414 ? 20 1 1 C U 11 1_555 B A 10 1_555 0.263 -0.454 0.333 -0.017 -4.456 3.366 14 E_U414:A413_D E 414 ? D 413 ? 20 1 1 C C 12 1_555 B G 9 1_555 0.311 -0.449 0.122 2.938 -8.726 -2.182 15 E_C415:G412_D E 415 ? D 412 ? 19 1 1 C C 13 1_555 B G 5 1_555 -0.579 -0.490 0.358 4.129 -10.267 -0.117 16 E_C416:G408_D E 416 ? D 408 ? 19 1 1 C A 14 1_555 B U 4 1_555 -0.548 -0.527 0.295 5.997 -11.187 3.265 17 E_A417:U407_D E 417 ? D 407 ? 20 1 1 C C 15 1_555 B G 3 1_555 0.750 -0.717 0.338 0.729 -13.658 0.310 18 E_C418:G406_D E 418 ? D 406 ? 19 1 1 C A 16 1_555 B U 2 1_555 0.080 -0.289 0.169 -0.065 -17.958 0.088 19 E_A419:U405_D E 419 ? D 405 ? 20 1 1 C G 17 1_555 B C 1 1_555 -0.219 -0.188 0.255 -9.207 -18.503 0.253 20 E_G420:C404_D E 420 ? D 404 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 10 1_555 A U 6 1_555 A C 13 1_555 A G 5 1_555 3.089 -0.941 2.973 -0.984 -0.364 73.369 -0.777 -2.613 2.942 -0.305 0.823 73.375 1 CC_A413C416:G408U409_CC C 413 ? C 409 ? C 416 ? C 408 ? 1 A C 13 1_555 A G 5 1_555 A A 14 1_555 A U 4 1_555 -0.134 -1.704 3.117 -2.148 3.704 31.780 -3.701 -0.115 2.908 6.726 3.900 32.060 2 CC_C416A417:U407G408_CC C 416 ? C 408 ? C 417 ? C 407 ? 1 A A 14 1_555 A U 4 1_555 A C 15 1_555 A G 3 1_555 -0.138 -1.085 3.274 0.560 2.936 33.762 -2.328 0.325 3.168 5.044 -0.962 33.891 3 CC_A417C418:G406U407_CC C 417 ? C 407 ? C 418 ? C 406 ? 1 A C 15 1_555 A G 3 1_555 A A 16 1_555 A U 2 1_555 -0.290 -1.624 3.243 -1.926 14.220 31.460 -4.709 0.222 2.328 24.682 3.344 34.502 4 CC_C418A419:U405G406_CC C 418 ? C 406 ? C 419 ? C 405 ? 1 A A 16 1_555 A U 2 1_555 A G 17 1_555 A C 1 1_555 0.337 -1.092 3.314 2.721 8.061 33.674 -3.041 -0.156 2.998 13.646 -4.606 34.702 5 CC_A419G420:C404U405_CC C 419 ? C 405 ? C 420 ? C 404 ? 1 A G 17 1_555 A C 1 1_555 C C 1 1_555 B G 17 1_555 0.816 -1.394 3.088 1.194 6.747 38.373 -2.836 -1.091 2.836 10.165 -1.798 38.957 6 CE_G420C404:G420C404_DC C 420 ? C 404 ? E 404 ? D 420 ? 1 C C 1 1_555 B G 17 1_555 C U 2 1_555 B A 16 1_555 -0.067 -1.234 3.084 -2.727 13.757 34.563 -3.538 -0.213 2.433 22.063 4.374 37.220 7 EE_C404U405:A419G420_DD E 404 ? D 420 ? E 405 ? D 419 ? 1 C U 2 1_555 B A 16 1_555 C G 3 1_555 B C 15 1_555 0.394 -1.786 3.235 2.170 8.775 26.856 -5.501 -0.349 2.558 18.248 -4.513 28.309 8 EE_U405G406:C418A419_DD E 405 ? D 419 ? E 406 ? D 418 ? 1 C G 3 1_555 B C 15 1_555 C U 4 1_555 B A 14 1_555 0.258 -1.380 3.302 -1.218 3.799 33.906 -2.944 -0.630 3.123 6.486 2.079 34.133 9 EE_G406U407:A417C418_DD E 406 ? D 418 ? E 407 ? D 417 ? 1 C U 4 1_555 B A 14 1_555 C G 5 1_555 B C 13 1_555 -0.143 -1.635 2.912 5.122 12.834 34.306 -3.976 0.783 2.143 20.745 -8.279 36.906 10 EE_U407G408:C416A417_DD E 407 ? D 417 ? E 408 ? D 416 ? 1 C G 5 1_555 B C 13 1_555 C G 9 1_555 B C 12 1_555 -0.732 -1.651 3.331 -0.886 4.803 33.774 -3.566 1.109 3.091 8.214 1.516 34.115 11 EE_G408G412:C415C416_DD E 408 ? D 416 ? E 412 ? D 415 ? 1 C G 9 1_555 B C 12 1_555 C A 10 1_555 B U 11 1_555 0.818 -2.054 3.124 -0.352 4.276 34.786 -4.000 -1.407 2.851 7.118 0.587 35.041 12 EE_G412A413:U414C415_DD E 412 ? D 415 ? E 413 ? D 414 ? 1 C A 10 1_555 B U 11 1_555 C U 11 1_555 B A 10 1_555 -0.464 -2.024 3.267 0.245 -4.698 28.120 -2.987 1.001 3.547 -9.584 -0.500 28.503 13 EE_A413U414:A413U414_DD E 413 ? D 414 ? E 414 ? D 413 ? 1 C U 11 1_555 B A 10 1_555 C C 12 1_555 B G 9 1_555 0.543 -2.354 3.022 3.049 1.613 31.614 -4.566 -0.482 2.940 2.949 -5.575 31.797 14 EE_U414C415:G412A413_DD E 414 ? D 413 ? E 415 ? D 412 ? 1 C C 12 1_555 B G 9 1_555 C C 13 1_555 B G 5 1_555 0.073 -2.055 3.043 -5.334 6.790 30.711 -4.809 -0.971 2.495 12.513 9.829 31.873 15 EE_C415C416:G408G412_DD E 415 ? D 412 ? E 416 ? D 408 ? 1 C C 13 1_555 B G 5 1_555 C A 14 1_555 B U 4 1_555 -0.652 -1.872 3.017 -3.746 8.105 28.576 -5.069 0.598 2.468 15.936 7.364 29.911 16 EE_C416A417:U407G408_DD E 416 ? D 408 ? E 417 ? D 407 ? 1 C A 14 1_555 B U 4 1_555 C C 15 1_555 B G 3 1_555 -0.081 -1.444 3.414 -0.782 4.680 36.848 -2.901 0.020 3.214 7.366 1.230 37.142 17 EE_A417C418:G406U407_DD E 417 ? D 407 ? E 418 ? D 406 ? 1 C C 15 1_555 B G 3 1_555 C A 16 1_555 B U 2 1_555 0.172 -1.867 2.998 3.519 11.142 25.505 -5.979 0.315 2.025 23.715 -7.490 28.014 18 EE_C418A419:U405G406_DD E 418 ? D 406 ? E 419 ? D 405 ? 1 C A 16 1_555 B U 2 1_555 C G 17 1_555 B C 1 1_555 -0.105 -1.754 3.242 -0.817 9.808 37.912 -3.711 0.066 2.724 14.793 1.232 39.123 19 EE_A419G420:C404U405_DD E 419 ? D 405 ? E 420 ? D 404 ? # _atom_sites.entry_id 1R3E _atom_sites.fract_transf_matrix[1][1] 0.01012 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00138 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.00628 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02266 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O P S # loop_