HEADER TRANSPORT PROTEIN 03-OCT-03 1R48 TITLE SOLUTION STRUCTURE OF THE C-TERMINAL CYTOPLASMIC DOMAIN RESIDUES 468- TITLE 2 497 OF ESCHERICHIA COLI PROTEIN PROP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE/BETAINE TRANSPORTER; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN (RESIDUE 468-497); COMPND 5 SYNONYM: PROLINE PORTER II, PPII; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHETIC PEPTIDE INCLUDING A CGG N-TERMINAL LINKER SOURCE 4 BLOCKED WITH IODOACETAMIDE, N-TERMINALLY ACETYLATED, C-TERMINALLY SOURCE 5 AMIDATED. THIS SEQUENCE IS NATURALLY PRESENT IN ESCHERICHIA COLI. KEYWDS OSMOSENSOR, CYTOPLASMIC, COILED-COIL, ANTIPARALLEL, TWO-STRANDED KEYWDS 2 HOMODIMER, TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 51 MDLTYP MINIMIZED AVERAGE AUTHOR D.L.ZOETEWEY,B.P.TRIPET,T.G.KUTATELADZE,M.J.OVERDUIN,J.M.WOOD, AUTHOR 2 R.S.HODGES REVDAT 3 02-MAR-22 1R48 1 REMARK SEQADV REVDAT 2 24-FEB-09 1R48 1 VERSN REVDAT 1 23-DEC-03 1R48 0 JRNL AUTH D.L.ZOETEWEY,B.P.TRIPET,T.G.KUTATELADZE,M.J.OVERDUIN, JRNL AUTH 2 J.M.WOOD,R.S.HODGES JRNL TITL SOLUTION STRUCTURE OF THE C-TERMINAL ANTIPARALLEL JRNL TITL 2 COILED-COIL DOMAIN FROM ESCHERICHIA COLI OSMOSENSOR PROP. JRNL REF J.MOL.BIOL. V. 334 1063 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 14643666 JRNL DOI 10.1016/J.JMB.2003.10.020 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, DELANO, GROS, GROSSE REMARK 3 -KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, READ, REMARK 3 RICE, SIMONSON, WARREN (CNS), BRUNGER, ADAMS, REMARK 3 CLORE, DELANO, GROS, GROSSE-KUNSTLEVE, JIANG, REMARK 3 KUSZEWSKI, NILGES, PANNU, READ, RICE, SIMONSON, REMARK 3 WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 676 TOTAL REMARK 3 RESTRAINTS, 632 NOE-DERIVED DISTANCE CONSTRAINTS AND 44 HYDROGEN- REMARK 3 BOND DISTANCE RESTRAINTS. REMARK 4 REMARK 4 1R48 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000020416. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 150 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM UNLABLED PEPTIDE PROP 468 REMARK 210 -497, 50 MM POTASSIUM PHOSPHATE, REMARK 210 100 MM KCL, 90% H2O, 10% D2O, 1 REMARK 210 MM NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 63 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 51 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH FAVORABLE NON REMARK 210 -BOND ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 13 ASP A 4 -80.80 -158.86 REMARK 500 13 ASN A 5 -43.32 -144.67 REMARK 500 15 ASP A 4 -83.92 -121.49 REMARK 500 15 ASN A 5 -45.18 -146.62 REMARK 500 16 ASP A 4 -83.66 -118.07 REMARK 500 16 ASN A 5 -44.09 -146.63 REMARK 500 18 ASP A 4 -84.26 -127.39 REMARK 500 18 ASN A 5 -44.22 -144.33 REMARK 500 19 ASP B 4 -84.87 -129.47 REMARK 500 19 ASN B 5 -44.26 -140.29 REMARK 500 21 PRO A 32 -167.65 -69.84 REMARK 500 25 ASP A 4 -84.14 -125.88 REMARK 500 25 ASN A 5 -45.61 -144.31 REMARK 500 27 ASP A 4 -84.13 -135.45 REMARK 500 27 ASN A 5 -43.77 -143.25 REMARK 500 27 PRO A 32 -71.74 -57.99 REMARK 500 28 ASP A 4 -84.54 -123.69 REMARK 500 28 ASN A 5 -44.37 -142.94 REMARK 500 30 ASP A 4 -83.58 -138.49 REMARK 500 30 ASN A 5 -44.45 -145.46 REMARK 500 30 ASP B 4 -84.84 -128.83 REMARK 500 30 ASN B 5 -45.01 -141.19 REMARK 500 31 PRO B 32 -168.03 -69.06 REMARK 500 32 ASP A 4 -84.21 -119.47 REMARK 500 32 ASN A 5 -45.05 -144.75 REMARK 500 34 ASP A 4 -83.97 -132.94 REMARK 500 34 ASN A 5 -44.78 -144.13 REMARK 500 34 PRO B 32 -167.74 -77.87 REMARK 500 35 ASP A 4 -83.88 -122.77 REMARK 500 35 ASN A 5 -45.12 -145.68 REMARK 500 36 ASP A 4 -83.71 -141.10 REMARK 500 36 ASN A 5 -43.07 -142.90 REMARK 500 36 ASP B 4 -84.78 -123.07 REMARK 500 36 ASN B 5 -44.80 -141.46 REMARK 500 38 ASP A 4 -79.85 -161.16 REMARK 500 38 ASN A 5 -44.47 -146.95 REMARK 500 38 ASP B 4 -84.43 -130.73 REMARK 500 38 ASN B 5 -44.69 -142.43 REMARK 500 40 ASP B 4 -80.31 -160.31 REMARK 500 40 ASN B 5 -43.48 -144.81 REMARK 500 41 ASP A 4 -80.13 -161.21 REMARK 500 41 ASN A 5 -43.91 -144.09 REMARK 500 42 ASP A 4 -84.15 -126.87 REMARK 500 42 ASN A 5 -43.66 -144.57 REMARK 500 43 ASP B 4 -81.87 -156.71 REMARK 500 43 ASN B 5 -43.37 -139.35 REMARK 500 44 ILE A 6 -48.97 -139.98 REMARK 500 45 ASP A 4 -80.79 -158.54 REMARK 500 45 ASN A 5 -43.69 -145.69 REMARK 500 45 PRO A 32 -168.08 -72.85 REMARK 500 REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1R48 A 4 33 UNP P30848 PROP_ECOLI 468 497 DBREF 1R48 B 4 33 UNP P30848 PROP_ECOLI 468 497 SEQADV 1R48 CYS A 1 UNP P30848 INSERTION SEQADV 1R48 GLY A 2 UNP P30848 INSERTION SEQADV 1R48 GLY A 3 UNP P30848 INSERTION SEQADV 1R48 CYS B 1 UNP P30848 INSERTION SEQADV 1R48 GLY B 2 UNP P30848 INSERTION SEQADV 1R48 GLY B 3 UNP P30848 INSERTION SEQRES 1 A 33 CYS GLY GLY ASP ASN ILE GLU GLN LYS ILE ASP ASP ILE SEQRES 2 A 33 ASP HIS GLU ILE ALA ASP LEU GLN ALA LYS ARG THR ARG SEQRES 3 A 33 LEU VAL GLN GLN HIS PRO ARG SEQRES 1 B 33 CYS GLY GLY ASP ASN ILE GLU GLN LYS ILE ASP ASP ILE SEQRES 2 B 33 ASP HIS GLU ILE ALA ASP LEU GLN ALA LYS ARG THR ARG SEQRES 3 B 33 LEU VAL GLN GLN HIS PRO ARG HELIX 1 1 ASP A 4 HIS A 31 1 28 HELIX 2 2 ASP B 4 HIS B 31 1 28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1