HEADER RNA BINDING PROTEIN 07-OCT-03 1R4K TITLE SOLUTION STRUCTURE OF THE DROSOPHILA ARGONAUTE 1 PAZ DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGONAUTE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAZ DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: AGO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET19B KEYWDS BETA BARREL, RNA BINDING PROTEIN EXPDTA SOLUTION NMR AUTHOR K.S.YAN,S.YAN,A.FAROOQ,A.HAN,L.ZENG,M.-M.ZHOU REVDAT 4 22-MAY-24 1R4K 1 REMARK REVDAT 3 02-MAR-22 1R4K 1 REMARK SEQADV REVDAT 2 24-FEB-09 1R4K 1 VERSN REVDAT 1 09-DEC-03 1R4K 0 JRNL AUTH K.S.YAN,S.YAN,A.FAROOQ,A.HAN,L.ZENG,M.-M.ZHOU JRNL TITL STRUCTURE AND CONSERVED RNA BINDING OF THE PAZ DOMAIN JRNL REF NATURE V. 426 468 2003 JRNL REFN ISSN 0028-0836 JRNL PMID 14615802 JRNL DOI 10.1038/NATURE02129 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1R4K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-03. REMARK 100 THE DEPOSITION ID IS D_1000020428. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100MM SODIUM PHOSPHATE, 150MM REMARK 210 NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5MM AGO1 PAZ DOMAIN, 100MM REMARK 210 SODIUM PHOSPHATE, 150MM NACL, REMARK 210 5MM DTT-D10 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.1, NMRPIPE 3.1, REMARK 210 NMRVIEW 5.0, X-PLOR 3.1, ARIA 1.2 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 GLY A 296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 302 -84.20 -171.81 REMARK 500 GLN A 303 87.57 48.37 REMARK 500 ASP A 314 93.72 50.79 REMARK 500 ILE A 337 -133.06 -69.11 REMARK 500 LYS A 338 94.02 62.99 REMARK 500 HIS A 346 -40.17 -150.44 REMARK 500 GLN A 349 -43.91 -146.93 REMARK 500 MET A 350 -61.32 -102.29 REMARK 500 ARG A 351 148.80 60.41 REMARK 500 CYS A 357 -38.72 -144.61 REMARK 500 ASN A 358 -172.75 -174.62 REMARK 500 LYS A 385 -44.16 -156.98 REMARK 500 LEU A 395 -65.97 62.41 REMARK 500 TYR A 397 45.74 -144.77 REMARK 500 HIS A 409 35.61 -148.98 REMARK 500 HIS A 411 57.70 -151.75 REMARK 500 GLU A 417 -165.38 -59.43 REMARK 500 VAL A 418 -69.41 66.04 REMARK 500 ALA A 423 35.79 -177.61 REMARK 500 GLN A 425 72.87 -102.21 REMARK 500 ILE A 428 -166.74 -113.99 REMARK 500 THR A 432 -160.35 -167.95 REMARK 500 LYS A 441 -172.00 52.14 REMARK 500 SER A 446 -177.09 52.73 REMARK 500 ARG A 452 99.45 -59.61 REMARK 500 GLU A 453 70.96 -68.09 REMARK 500 ASN A 456 176.61 53.22 REMARK 500 LEU A 457 177.42 52.98 REMARK 500 VAL A 458 34.07 -161.21 REMARK 500 LYS A 459 171.68 55.20 REMARK 500 ASP A 462 174.72 53.95 REMARK 500 PHE A 463 -60.29 -104.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 1R4K A 297 464 UNP Q9V6V6 Q9V6V6_DROME 331 498 SEQADV 1R4K GLY A 296 UNP Q9V6V6 CLONING ARTIFACT SEQRES 1 A 169 GLY THR ALA PHE TYR LYS ALA GLN PRO VAL ILE ASP PHE SEQRES 2 A 169 MET CYS GLU VAL LEU ASP ILE ARG ASP ILE ASN GLU GLN SEQRES 3 A 169 ARG LYS PRO LEU THR ASP SER GLN ARG VAL LYS PHE THR SEQRES 4 A 169 LYS GLU ILE LYS GLY LEU LYS ILE GLU ILE THR HIS CYS SEQRES 5 A 169 GLY GLN MET ARG ARG LYS TYR ARG VAL CYS ASN VAL THR SEQRES 6 A 169 ARG ARG PRO ALA GLN MET GLN SER PHE PRO LEU GLN LEU SEQRES 7 A 169 GLU ASN GLY GLN THR VAL GLU CYS THR VAL ALA LYS TYR SEQRES 8 A 169 PHE LEU ASP LYS TYR ARG MET LYS LEU ARG TYR PRO HIS SEQRES 9 A 169 LEU PRO CYS LEU GLN VAL GLY GLN GLU HIS LYS HIS THR SEQRES 10 A 169 TYR LEU PRO LEU GLU VAL CYS ASN ILE VAL ALA GLY GLN SEQRES 11 A 169 ARG CYS ILE LYS LYS LEU THR ASP MET GLN THR SER THR SEQRES 12 A 169 MET ILE LYS ALA THR ALA ARG SER ALA PRO ASP ARG GLU SEQRES 13 A 169 ARG GLU ILE ASN ASN LEU VAL LYS ARG ALA ASP PHE ASN HELIX 1 1 PRO A 304 LEU A 313 1 10 HELIX 2 2 THR A 326 ILE A 337 1 12 HELIX 3 3 PRO A 363 MET A 366 5 4 HELIX 4 4 LYS A 385 LYS A 390 1 6 SHEET 1 A 3 ARG A 352 ARG A 355 0 SHEET 2 A 3 LYS A 341 THR A 345 -1 N ILE A 342 O TYR A 354 SHEET 3 A 3 VAL A 418 VAL A 422 -1 O ASN A 420 N GLU A 343 SHEET 1 B 3 ASN A 358 THR A 360 0 SHEET 2 B 3 CYS A 402 VAL A 405 -1 O GLN A 404 N ASN A 358 SHEET 3 B 3 THR A 412 LEU A 414 -1 O LEU A 414 N LEU A 403 SHEET 1 C 2 GLN A 367 LEU A 373 0 SHEET 2 C 2 GLN A 377 VAL A 383 -1 O VAL A 379 N LEU A 371 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000