data_1R8R # _entry.id 1R8R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1R8R RCSB RCSB020577 WWPDB D_1000020577 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2004-02-10 _pdbx_database_PDB_obs_spr.pdb_id 1S9D _pdbx_database_PDB_obs_spr.replace_pdb_id 1R8R _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1R8M 'the same mutated Sec7 domain of ARNO solved isolated' unspecified PDB 1PBV 'the wild type construct of the Sec7 domain of ARNO solved isolated' unspecified PDB 1R8Q 'Crystal structure of an abortive Arf1/GDP/Mg/Brefeldin A/ARNO-Sec7[F190Y/A191S/S198D/P208M] complex' unspecified PDB 1R8S 'crystal structure of an abortive Arf1[D1-17]/GDP/ARNO-Sec7[F190Y/A191S/S198D/P208M/E156K] complex' unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1R8R _pdbx_database_status.recvd_initial_deposition_date 2003-10-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Renault, L.' 1 'Guibert, B.' 2 'Cherfils, J.' 3 # _citation.id primary _citation.title 'Structural snapshots of the mechanism and inhibition of a guanine nucleotide exchange factor' _citation.journal_abbrev Nature _citation.journal_volume 426 _citation.page_first 525 _citation.page_last 530 _citation.year 2003 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14654833 _citation.pdbx_database_id_DOI 10.1038/nature02197 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Renault, L.' 1 primary 'Guibert, B.' 2 primary 'Cherfils, J.' 3 # _cell.entry_id 1R8R _cell.length_a 111.462 _cell.length_b 111.462 _cell.length_c 74.534 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R8R _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADP-ribosylation factor 1' 17838.326 1 ? ? 'Residues 18-181' ? 2 polymer man Arno 22527.818 1 ? F190Y/A191S/S198D/P208M 'Sec7 domain (residues 50-252)' ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 5 non-polymer syn '1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE' 280.359 1 ? ? ? ? 6 water nat water 18.015 286 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'ARF nucleotide-binding site opener, Cytohesin 2, ARF exchange factor' # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 ILE n 1 4 LEU n 1 5 MET n 1 6 VAL n 1 7 GLY n 1 8 LEU n 1 9 ASP n 1 10 ALA n 1 11 ALA n 1 12 GLY n 1 13 LYS n 1 14 THR n 1 15 THR n 1 16 ILE n 1 17 LEU n 1 18 TYR n 1 19 LYS n 1 20 LEU n 1 21 LYS n 1 22 THR n 1 23 ILE n 1 24 PRO n 1 25 THR n 1 26 ILE n 1 27 GLY n 1 28 PHE n 1 29 ASN n 1 30 VAL n 1 31 GLU n 1 32 THR n 1 33 VAL n 1 34 GLU n 1 35 TYR n 1 36 LYS n 1 37 ASN n 1 38 ILE n 1 39 SER n 1 40 PHE n 1 41 THR n 1 42 VAL n 1 43 TRP n 1 44 ASP n 1 45 VAL n 1 46 GLY n 1 47 GLY n 1 48 GLN n 1 49 ASP n 1 50 LYS n 1 51 ILE n 1 52 ARG n 1 53 PRO n 1 54 LEU n 1 55 TRP n 1 56 ARG n 1 57 HIS n 1 58 TYR n 1 59 PHE n 1 60 GLN n 1 61 ASN n 1 62 THR n 1 63 GLN n 1 64 GLY n 1 65 LEU n 1 66 ILE n 1 67 PHE n 1 68 VAL n 1 69 VAL n 1 70 ASP n 1 71 SER n 1 72 ASN n 1 73 ASP n 1 74 ARG n 1 75 GLU n 1 76 ARG n 1 77 VAL n 1 78 ASN n 1 79 GLU n 1 80 ALA n 1 81 ARG n 1 82 GLU n 1 83 GLU n 1 84 LEU n 1 85 MET n 1 86 ARG n 1 87 MET n 1 88 LEU n 1 89 ALA n 1 90 GLU n 1 91 ASP n 1 92 GLU n 1 93 LEU n 1 94 ARG n 1 95 ASP n 1 96 ALA n 1 97 VAL n 1 98 LEU n 1 99 LEU n 1 100 VAL n 1 101 PHE n 1 102 ALA n 1 103 ASN n 1 104 LYS n 1 105 GLN n 1 106 ASP n 1 107 LEU n 1 108 PRO n 1 109 ASN n 1 110 ALA n 1 111 MET n 1 112 ASN n 1 113 ALA n 1 114 ALA n 1 115 GLU n 1 116 ILE n 1 117 THR n 1 118 ASP n 1 119 LYS n 1 120 LEU n 1 121 GLY n 1 122 LEU n 1 123 HIS n 1 124 SER n 1 125 LEU n 1 126 ARG n 1 127 HIS n 1 128 ARG n 1 129 ASN n 1 130 TRP n 1 131 TYR n 1 132 ILE n 1 133 GLN n 1 134 ALA n 1 135 THR n 1 136 CYS n 1 137 ALA n 1 138 THR n 1 139 SER n 1 140 GLY n 1 141 ASP n 1 142 GLY n 1 143 LEU n 1 144 TYR n 1 145 GLU n 1 146 GLY n 1 147 LEU n 1 148 ASP n 1 149 TRP n 1 150 LEU n 1 151 SER n 1 152 ASN n 1 153 GLN n 1 154 LEU n 1 155 ARG n 2 1 LYS n 2 2 THR n 2 3 LEU n 2 4 GLN n 2 5 ARG n 2 6 ASN n 2 7 ARG n 2 8 LYS n 2 9 MET n 2 10 ALA n 2 11 MET n 2 12 GLY n 2 13 ARG n 2 14 LYS n 2 15 LYS n 2 16 PHE n 2 17 ASN n 2 18 MET n 2 19 ASP n 2 20 PRO n 2 21 LYS n 2 22 LYS n 2 23 GLY n 2 24 ILE n 2 25 GLN n 2 26 PHE n 2 27 LEU n 2 28 VAL n 2 29 GLU n 2 30 ASN n 2 31 GLU n 2 32 LEU n 2 33 LEU n 2 34 GLN n 2 35 ASN n 2 36 THR n 2 37 PRO n 2 38 GLU n 2 39 GLU n 2 40 ILE n 2 41 ALA n 2 42 ARG n 2 43 PHE n 2 44 LEU n 2 45 TYR n 2 46 LYS n 2 47 GLY n 2 48 GLU n 2 49 GLY n 2 50 LEU n 2 51 ASN n 2 52 LYS n 2 53 THR n 2 54 ALA n 2 55 ILE n 2 56 GLY n 2 57 ASP n 2 58 TYR n 2 59 LEU n 2 60 GLY n 2 61 GLU n 2 62 ARG n 2 63 GLU n 2 64 GLU n 2 65 LEU n 2 66 ASN n 2 67 LEU n 2 68 ALA n 2 69 VAL n 2 70 LEU n 2 71 HIS n 2 72 ALA n 2 73 PHE n 2 74 VAL n 2 75 ASP n 2 76 LEU n 2 77 HIS n 2 78 GLU n 2 79 PHE n 2 80 THR n 2 81 ASP n 2 82 LEU n 2 83 ASN n 2 84 LEU n 2 85 VAL n 2 86 GLN n 2 87 ALA n 2 88 LEU n 2 89 ARG n 2 90 GLN n 2 91 PHE n 2 92 LEU n 2 93 TRP n 2 94 SER n 2 95 PHE n 2 96 ARG n 2 97 LEU n 2 98 PRO n 2 99 GLY n 2 100 GLU n 2 101 ALA n 2 102 GLN n 2 103 LYS n 2 104 ILE n 2 105 ASP n 2 106 ARG n 2 107 MET n 2 108 MET n 2 109 GLU n 2 110 ALA n 2 111 PHE n 2 112 ALA n 2 113 GLN n 2 114 ARG n 2 115 TYR n 2 116 CYS n 2 117 LEU n 2 118 CME n 2 119 ASN n 2 120 PRO n 2 121 GLY n 2 122 VAL n 2 123 PHE n 2 124 GLN n 2 125 SER n 2 126 THR n 2 127 ASP n 2 128 THR n 2 129 CYS n 2 130 TYR n 2 131 VAL n 2 132 LEU n 2 133 SER n 2 134 TYR n 2 135 SER n 2 136 VAL n 2 137 ILE n 2 138 MET n 2 139 LEU n 2 140 ASN n 2 141 THR n 2 142 ASP n 2 143 LEU n 2 144 HIS n 2 145 ASN n 2 146 PRO n 2 147 ASN n 2 148 VAL n 2 149 ARG n 2 150 ASP n 2 151 LYS n 2 152 MET n 2 153 GLY n 2 154 LEU n 2 155 GLU n 2 156 ARG n 2 157 PHE n 2 158 VAL n 2 159 ALA n 2 160 MET n 2 161 ASN n 2 162 ARG n 2 163 GLY n 2 164 ILE n 2 165 ASN n 2 166 GLU n 2 167 GLY n 2 168 GLY n 2 169 ASP n 2 170 LEU n 2 171 PRO n 2 172 GLU n 2 173 GLU n 2 174 LEU n 2 175 LEU n 2 176 ARG n 2 177 ASN n 2 178 LEU n 2 179 TYR n 2 180 ASP n 2 181 SER n 2 182 ILE n 2 183 ARG n 2 184 ASN n 2 185 GLU n 2 186 PRO n 2 187 PHE n 2 188 LYS n 2 189 ILE n 2 190 PRO n 2 191 GLU n 2 192 ASP n 2 193 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? bovine ? ARF1 ? ? ? ? ? ? 'Bos taurus' ? ? ? ? ? ? ? ? bacteria 'Escherichia coli' ? ? ? ? ? ? ? 'BL21 Gold' ? ? ? ? ? ? ? plasmid ? ? ? pET11a ? ? 2 1 sample ? ? ? human ? 'PSCD2, ARNO' ? ? ? ? ? ? 'Homo sapiens' ? ? ? ? ? ? ? ? bacteria 'Escherichia coli' ? ? ? ? ? ? ? 'BL21 Gold' ? ? ? ? ? ? ? plasmid ? ? ? pET11d ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 SWS ARF1_HUMAN P32889 1 ;MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR ERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL RNQK ; 17 ? 2 SWS CYH2_HUMAN Q99418 2 ;LEANEGSKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAF VDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYVLSFAVIMLNTSLHNPNVRDKPG LERFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGND ; 50 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1R8R A 1 ? 164 ? P32889 17 ? 180 ? 18 181 2 2 1R8R E 1 ? 203 ? Q99418 50 ? 252 ? 50 252 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 1R8R CME E 118 ? SWS Q99418 CYS 174 'MODIFIED RESIDUE' 174 1 2 1R8R TYR E 134 ? SWS Q99418 PHE 190 ENGINEERED 190 2 2 1R8R SER E 135 ? SWS Q99418 ALA 191 ENGINEERED 191 3 2 1R8R ASP E 142 ? SWS Q99418 SER 198 ENGINEERED 198 4 2 1R8R MET E 152 ? SWS Q99418 PRO 208 ENGINEERED 208 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AFB non-polymer . '1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE' 'BREFELDIN A' 'C16 H24 O4' 280.359 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CME 'L-peptide linking' n 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' ? 'C5 H11 N O3 S2' 197.276 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1R8R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57.11 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '29% Peg 3350, 40mM NH4Cl, 40mM Potassium Formate, 100mM Tris, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.980 # _reflns.entry_id 1R8R _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.80 _reflns.number_obs 43814 _reflns.number_all 43814 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_av_sigmaI 26.2 _reflns.B_iso_Wilson_estimate 22.76 _reflns.pdbx_redundancy 12 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 97.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.405 _reflns_shell.meanI_over_sigI_obs 6.4 _reflns_shell.pdbx_redundancy 12.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R8R _refine.ls_number_reflns_obs 41588 _refine.ls_number_reflns_all 43814 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.88 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.54 _refine.ls_R_factor_obs 0.18734 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18534 _refine.ls_R_factor_R_free 0.22416 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2225 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 19.005 _refine.aniso_B[1][1] -1.96 _refine.aniso_B[2][2] -1.96 _refine.aniso_B[3][3] 3.91 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'crystal structure of the Arf1[D1-17]/Gea2-sec7 complex (Goldberg, J., (1998) Cell 95(2):237-48)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.113 _refine.pdbx_overall_ESU_R_Free 0.114 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2839 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 286 _refine_hist.number_atoms_total 3170 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 29.88 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.026 0.021 ? 2937 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 2646 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.945 1.973 ? 3964 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.008 3.000 ? 6146 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.846 5.000 ? 345 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.127 0.200 ? 432 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 3214 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.005 0.020 ? 600 'X-RAY DIFFRACTION' ? r_nbd_refined 0.230 0.200 ? 636 'X-RAY DIFFRACTION' ? r_nbd_other 0.263 0.200 ? 3210 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.091 0.200 ? 1653 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.177 0.200 ? 226 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.002 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.241 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.284 0.200 ? 57 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.144 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.239 1.500 ? 1728 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.099 2.000 ? 2781 'X-RAY DIFFRACTION' ? r_scbond_it 3.297 3.000 ? 1209 'X-RAY DIFFRACTION' ? r_scangle_it 5.138 4.500 ? 1183 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 19 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.849 _refine_ls_shell.number_reflns_R_work 3171 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.243 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 181 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1R8R _struct.title 'ARF1[DELTA 1-17]-GDP-MG IN COMPLEX WITH BREFELDIN A AND A SEC7 DOMAIN' _struct.pdbx_descriptor 'ADP-ribosylation factor 1/Cytohesin 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R8R _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT/EXCHANGE FACTOR' _struct_keywords.text 'PROTEIN TRANSPORT/EXCHANGE FACTOR, PROTEIN TRANSPORT-EXCHANGE FACTOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 12 ? LYS A 21 ? GLY A 29 LYS A 38 1 ? 10 HELX_P HELX_P2 2 GLN A 48 ? GLN A 60 ? GLN A 71 GLN A 83 5 ? 13 HELX_P HELX_P3 3 ASP A 73 ? GLU A 75 ? ASP A 96 GLU A 98 5 ? 3 HELX_P HELX_P4 4 ARG A 76 ? ALA A 89 ? ARG A 99 ALA A 112 1 ? 14 HELX_P HELX_P5 5 GLU A 90 ? ARG A 94 ? GLU A 113 ARG A 117 5 ? 5 HELX_P HELX_P6 6 ASN A 112 ? LEU A 120 ? ASN A 135 LEU A 143 1 ? 9 HELX_P HELX_P7 7 GLY A 121 ? LEU A 125 ? GLY A 144 LEU A 148 5 ? 5 HELX_P HELX_P8 8 GLY A 142 ? ARG A 155 ? GLY A 165 ARG A 178 1 ? 14 HELX_P HELX_P9 9 LYS B 1 ? ASP B 19 ? LYS E 57 ASP E 75 1 ? 19 HELX_P HELX_P10 10 ASP B 19 ? ASN B 30 ? ASP E 75 ASN E 86 1 ? 12 HELX_P HELX_P11 11 THR B 36 ? TYR B 45 ? THR E 92 TYR E 101 1 ? 10 HELX_P HELX_P12 12 ASN B 51 ? GLY B 60 ? ASN E 107 GLY E 116 1 ? 10 HELX_P HELX_P13 13 GLU B 63 ? ASP B 75 ? GLU E 119 ASP E 131 1 ? 13 HELX_P HELX_P14 14 ASN B 83 ? LEU B 92 ? ASN E 139 LEU E 148 1 ? 10 HELX_P HELX_P15 15 GLU B 100 ? ASN B 119 ? GLU E 156 ASN E 175 1 ? 20 HELX_P HELX_P16 16 SER B 125 ? ASN B 145 ? SER E 181 ASN E 201 1 ? 21 HELX_P HELX_P17 17 GLY B 153 ? ASN B 161 ? GLY E 209 ASN E 217 1 ? 9 HELX_P HELX_P18 18 PRO B 171 ? GLU B 185 ? PRO E 227 GLU E 241 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 32 ? TYR A 35 ? THR A 55 TYR A 58 A 2 ILE A 38 ? VAL A 42 ? ILE A 61 VAL A 65 A 3 ILE A 3 ? VAL A 6 ? ILE A 20 VAL A 23 A 4 GLY A 64 ? ASP A 70 ? GLY A 87 ASP A 93 A 5 VAL A 97 ? ASN A 103 ? VAL A 120 ASN A 126 A 6 TRP A 130 ? ALA A 134 ? TRP A 153 ALA A 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 33 ? N VAL A 56 O PHE A 40 ? O PHE A 63 A 2 3 O THR A 41 ? O THR A 64 N MET A 5 ? N MET A 22 A 3 4 N LEU A 4 ? N LEU A 21 O ILE A 66 ? O ILE A 89 A 4 5 N LEU A 65 ? N LEU A 88 O VAL A 97 ? O VAL A 120 A 5 6 N VAL A 100 ? N VAL A 123 O TYR A 131 ? O TYR A 154 # _database_PDB_matrix.entry_id 1R8R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1R8R _atom_sites.fract_transf_matrix[1][1] 0.008972 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008972 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013417 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 18 18 MET MET A . n A 1 2 ARG 2 19 19 ARG ARG A . n A 1 3 ILE 3 20 20 ILE ILE A . n A 1 4 LEU 4 21 21 LEU LEU A . n A 1 5 MET 5 22 22 MET MET A . n A 1 6 VAL 6 23 23 VAL VAL A . n A 1 7 GLY 7 24 24 GLY GLY A . n A 1 8 LEU 8 25 25 LEU LEU A . n A 1 9 ASP 9 26 26 ASP ASP A . n A 1 10 ALA 10 27 27 ALA ALA A . n A 1 11 ALA 11 28 28 ALA ALA A . n A 1 12 GLY 12 29 29 GLY GLY A . n A 1 13 LYS 13 30 30 LYS LYS A . n A 1 14 THR 14 31 31 THR THR A . n A 1 15 THR 15 32 32 THR THR A . n A 1 16 ILE 16 33 33 ILE ILE A . n A 1 17 LEU 17 34 34 LEU LEU A . n A 1 18 TYR 18 35 35 TYR TYR A . n A 1 19 LYS 19 36 36 LYS LYS A . n A 1 20 LEU 20 37 37 LEU LEU A . n A 1 21 LYS 21 38 38 LYS LYS A . n A 1 22 THR 22 45 45 THR THR A . n A 1 23 ILE 23 46 46 ILE ILE A . n A 1 24 PRO 24 47 47 PRO PRO A . n A 1 25 THR 25 48 48 THR THR A . n A 1 26 ILE 26 49 49 ILE ILE A . n A 1 27 GLY 27 50 50 GLY GLY A . n A 1 28 PHE 28 51 51 PHE PHE A . n A 1 29 ASN 29 52 52 ASN ASN A . n A 1 30 VAL 30 53 53 VAL VAL A . n A 1 31 GLU 31 54 54 GLU GLU A . n A 1 32 THR 32 55 55 THR THR A . n A 1 33 VAL 33 56 56 VAL VAL A . n A 1 34 GLU 34 57 57 GLU GLU A . n A 1 35 TYR 35 58 58 TYR TYR A . n A 1 36 LYS 36 59 59 LYS LYS A . n A 1 37 ASN 37 60 60 ASN ASN A . n A 1 38 ILE 38 61 61 ILE ILE A . n A 1 39 SER 39 62 62 SER SER A . n A 1 40 PHE 40 63 63 PHE PHE A . n A 1 41 THR 41 64 64 THR THR A . n A 1 42 VAL 42 65 65 VAL VAL A . n A 1 43 TRP 43 66 66 TRP TRP A . n A 1 44 ASP 44 67 67 ASP ASP A . n A 1 45 VAL 45 68 68 VAL VAL A . n A 1 46 GLY 46 69 69 GLY GLY A . n A 1 47 GLY 47 70 70 GLY GLY A . n A 1 48 GLN 48 71 71 GLN GLN A . n A 1 49 ASP 49 72 72 ASP ASP A . n A 1 50 LYS 50 73 73 LYS LYS A . n A 1 51 ILE 51 74 74 ILE ILE A . n A 1 52 ARG 52 75 75 ARG ARG A . n A 1 53 PRO 53 76 76 PRO PRO A . n A 1 54 LEU 54 77 77 LEU LEU A . n A 1 55 TRP 55 78 78 TRP TRP A . n A 1 56 ARG 56 79 79 ARG ARG A . n A 1 57 HIS 57 80 80 HIS HIS A . n A 1 58 TYR 58 81 81 TYR TYR A . n A 1 59 PHE 59 82 82 PHE PHE A . n A 1 60 GLN 60 83 83 GLN GLN A . n A 1 61 ASN 61 84 84 ASN ASN A . n A 1 62 THR 62 85 85 THR THR A . n A 1 63 GLN 63 86 86 GLN GLN A . n A 1 64 GLY 64 87 87 GLY GLY A . n A 1 65 LEU 65 88 88 LEU LEU A . n A 1 66 ILE 66 89 89 ILE ILE A . n A 1 67 PHE 67 90 90 PHE PHE A . n A 1 68 VAL 68 91 91 VAL VAL A . n A 1 69 VAL 69 92 92 VAL VAL A . n A 1 70 ASP 70 93 93 ASP ASP A . n A 1 71 SER 71 94 94 SER SER A . n A 1 72 ASN 72 95 95 ASN ASN A . n A 1 73 ASP 73 96 96 ASP ASP A . n A 1 74 ARG 74 97 97 ARG ARG A . n A 1 75 GLU 75 98 98 GLU GLU A . n A 1 76 ARG 76 99 99 ARG ARG A . n A 1 77 VAL 77 100 100 VAL VAL A . n A 1 78 ASN 78 101 101 ASN ASN A . n A 1 79 GLU 79 102 102 GLU GLU A . n A 1 80 ALA 80 103 103 ALA ALA A . n A 1 81 ARG 81 104 104 ARG ARG A . n A 1 82 GLU 82 105 105 GLU GLU A . n A 1 83 GLU 83 106 106 GLU GLU A . n A 1 84 LEU 84 107 107 LEU LEU A . n A 1 85 MET 85 108 108 MET MET A . n A 1 86 ARG 86 109 109 ARG ARG A . n A 1 87 MET 87 110 110 MET MET A . n A 1 88 LEU 88 111 111 LEU LEU A . n A 1 89 ALA 89 112 112 ALA ALA A . n A 1 90 GLU 90 113 113 GLU GLU A . n A 1 91 ASP 91 114 114 ASP ASP A . n A 1 92 GLU 92 115 115 GLU GLU A . n A 1 93 LEU 93 116 116 LEU LEU A . n A 1 94 ARG 94 117 117 ARG ARG A . n A 1 95 ASP 95 118 118 ASP ASP A . n A 1 96 ALA 96 119 119 ALA ALA A . n A 1 97 VAL 97 120 120 VAL VAL A . n A 1 98 LEU 98 121 121 LEU LEU A . n A 1 99 LEU 99 122 122 LEU LEU A . n A 1 100 VAL 100 123 123 VAL VAL A . n A 1 101 PHE 101 124 124 PHE PHE A . n A 1 102 ALA 102 125 125 ALA ALA A . n A 1 103 ASN 103 126 126 ASN ASN A . n A 1 104 LYS 104 127 127 LYS LYS A . n A 1 105 GLN 105 128 128 GLN GLN A . n A 1 106 ASP 106 129 129 ASP ASP A . n A 1 107 LEU 107 130 130 LEU LEU A . n A 1 108 PRO 108 131 131 PRO PRO A . n A 1 109 ASN 109 132 132 ASN ASN A . n A 1 110 ALA 110 133 133 ALA ALA A . n A 1 111 MET 111 134 134 MET MET A . n A 1 112 ASN 112 135 135 ASN ASN A . n A 1 113 ALA 113 136 136 ALA ALA A . n A 1 114 ALA 114 137 137 ALA ALA A . n A 1 115 GLU 115 138 138 GLU GLU A . n A 1 116 ILE 116 139 139 ILE ILE A . n A 1 117 THR 117 140 140 THR THR A . n A 1 118 ASP 118 141 141 ASP ASP A . n A 1 119 LYS 119 142 142 LYS LYS A . n A 1 120 LEU 120 143 143 LEU LEU A . n A 1 121 GLY 121 144 144 GLY GLY A . n A 1 122 LEU 122 145 145 LEU LEU A . n A 1 123 HIS 123 146 146 HIS HIS A . n A 1 124 SER 124 147 147 SER SER A . n A 1 125 LEU 125 148 148 LEU LEU A . n A 1 126 ARG 126 149 149 ARG ARG A . n A 1 127 HIS 127 150 150 HIS HIS A . n A 1 128 ARG 128 151 151 ARG ARG A . n A 1 129 ASN 129 152 152 ASN ASN A . n A 1 130 TRP 130 153 153 TRP TRP A . n A 1 131 TYR 131 154 154 TYR TYR A . n A 1 132 ILE 132 155 155 ILE ILE A . n A 1 133 GLN 133 156 156 GLN GLN A . n A 1 134 ALA 134 157 157 ALA ALA A . n A 1 135 THR 135 158 158 THR THR A . n A 1 136 CYS 136 159 159 CYS CYS A . n A 1 137 ALA 137 160 160 ALA ALA A . n A 1 138 THR 138 161 161 THR THR A . n A 1 139 SER 139 162 162 SER SER A . n A 1 140 GLY 140 163 163 GLY GLY A . n A 1 141 ASP 141 164 164 ASP ASP A . n A 1 142 GLY 142 165 165 GLY GLY A . n A 1 143 LEU 143 166 166 LEU LEU A . n A 1 144 TYR 144 167 167 TYR TYR A . n A 1 145 GLU 145 168 168 GLU GLU A . n A 1 146 GLY 146 169 169 GLY GLY A . n A 1 147 LEU 147 170 170 LEU LEU A . n A 1 148 ASP 148 171 171 ASP ASP A . n A 1 149 TRP 149 172 172 TRP TRP A . n A 1 150 LEU 150 173 173 LEU LEU A . n A 1 151 SER 151 174 174 SER SER A . n A 1 152 ASN 152 175 175 ASN ASN A . n A 1 153 GLN 153 176 176 GLN GLN A . n A 1 154 LEU 154 177 177 LEU LEU A . n A 1 155 ARG 155 178 178 ARG ARG A . n B 2 1 LYS 1 57 57 LYS LYS E . n B 2 2 THR 2 58 58 THR THR E . n B 2 3 LEU 3 59 59 LEU LEU E . n B 2 4 GLN 4 60 60 GLN GLN E . n B 2 5 ARG 5 61 61 ARG ARG E . n B 2 6 ASN 6 62 62 ASN ASN E . n B 2 7 ARG 7 63 63 ARG ARG E . n B 2 8 LYS 8 64 64 LYS LYS E . n B 2 9 MET 9 65 65 MET MET E . n B 2 10 ALA 10 66 66 ALA ALA E . n B 2 11 MET 11 67 67 MET MET E . n B 2 12 GLY 12 68 68 GLY GLY E . n B 2 13 ARG 13 69 69 ARG ARG E . n B 2 14 LYS 14 70 70 LYS LYS E . n B 2 15 LYS 15 71 71 LYS LYS E . n B 2 16 PHE 16 72 72 PHE PHE E . n B 2 17 ASN 17 73 73 ASN ASN E . n B 2 18 MET 18 74 74 MET MET E . n B 2 19 ASP 19 75 75 ASP ASP E . n B 2 20 PRO 20 76 76 PRO PRO E . n B 2 21 LYS 21 77 77 LYS LYS E . n B 2 22 LYS 22 78 78 LYS LYS E . n B 2 23 GLY 23 79 79 GLY GLY E . n B 2 24 ILE 24 80 80 ILE ILE E . n B 2 25 GLN 25 81 81 GLN GLN E . n B 2 26 PHE 26 82 82 PHE PHE E . n B 2 27 LEU 27 83 83 LEU LEU E . n B 2 28 VAL 28 84 84 VAL VAL E . n B 2 29 GLU 29 85 85 GLU GLU E . n B 2 30 ASN 30 86 86 ASN ASN E . n B 2 31 GLU 31 87 87 GLU GLU E . n B 2 32 LEU 32 88 88 LEU LEU E . n B 2 33 LEU 33 89 89 LEU LEU E . n B 2 34 GLN 34 90 90 GLN GLN E . n B 2 35 ASN 35 91 91 ASN ASN E . n B 2 36 THR 36 92 92 THR THR E . n B 2 37 PRO 37 93 93 PRO PRO E . n B 2 38 GLU 38 94 94 GLU GLU E . n B 2 39 GLU 39 95 95 GLU GLU E . n B 2 40 ILE 40 96 96 ILE ILE E . n B 2 41 ALA 41 97 97 ALA ALA E . n B 2 42 ARG 42 98 98 ARG ARG E . n B 2 43 PHE 43 99 99 PHE PHE E . n B 2 44 LEU 44 100 100 LEU LEU E . n B 2 45 TYR 45 101 101 TYR TYR E . n B 2 46 LYS 46 102 102 LYS LYS E . n B 2 47 GLY 47 103 103 GLY GLY E . n B 2 48 GLU 48 104 104 GLU GLU E . n B 2 49 GLY 49 105 105 GLY GLY E . n B 2 50 LEU 50 106 106 LEU LEU E . n B 2 51 ASN 51 107 107 ASN ASN E . n B 2 52 LYS 52 108 108 LYS LYS E . n B 2 53 THR 53 109 109 THR THR E . n B 2 54 ALA 54 110 110 ALA ALA E . n B 2 55 ILE 55 111 111 ILE ILE E . n B 2 56 GLY 56 112 112 GLY GLY E . n B 2 57 ASP 57 113 113 ASP ASP E . n B 2 58 TYR 58 114 114 TYR TYR E . n B 2 59 LEU 59 115 115 LEU LEU E . n B 2 60 GLY 60 116 116 GLY GLY E . n B 2 61 GLU 61 117 117 GLU GLU E . n B 2 62 ARG 62 118 118 ARG ARG E . n B 2 63 GLU 63 119 119 GLU GLU E . n B 2 64 GLU 64 120 120 GLU GLU E . n B 2 65 LEU 65 121 121 LEU LEU E . n B 2 66 ASN 66 122 122 ASN ASN E . n B 2 67 LEU 67 123 123 LEU LEU E . n B 2 68 ALA 68 124 124 ALA ALA E . n B 2 69 VAL 69 125 125 VAL VAL E . n B 2 70 LEU 70 126 126 LEU LEU E . n B 2 71 HIS 71 127 127 HIS HIS E . n B 2 72 ALA 72 128 128 ALA ALA E . n B 2 73 PHE 73 129 129 PHE PHE E . n B 2 74 VAL 74 130 130 VAL VAL E . n B 2 75 ASP 75 131 131 ASP ASP E . n B 2 76 LEU 76 132 132 LEU LEU E . n B 2 77 HIS 77 133 133 HIS HIS E . n B 2 78 GLU 78 134 134 GLU GLU E . n B 2 79 PHE 79 135 135 PHE PHE E . n B 2 80 THR 80 136 136 THR THR E . n B 2 81 ASP 81 137 137 ASP ASP E . n B 2 82 LEU 82 138 138 LEU LEU E . n B 2 83 ASN 83 139 139 ASN ASN E . n B 2 84 LEU 84 140 140 LEU LEU E . n B 2 85 VAL 85 141 141 VAL VAL E . n B 2 86 GLN 86 142 142 GLN GLN E . n B 2 87 ALA 87 143 143 ALA ALA E . n B 2 88 LEU 88 144 144 LEU LEU E . n B 2 89 ARG 89 145 145 ARG ARG E . n B 2 90 GLN 90 146 146 GLN GLN E . n B 2 91 PHE 91 147 147 PHE PHE E . n B 2 92 LEU 92 148 148 LEU LEU E . n B 2 93 TRP 93 149 149 TRP TRP E . n B 2 94 SER 94 150 150 SER SER E . n B 2 95 PHE 95 151 151 PHE PHE E . n B 2 96 ARG 96 152 152 ARG ARG E . n B 2 97 LEU 97 153 153 LEU LEU E . n B 2 98 PRO 98 154 154 PRO PRO E . n B 2 99 GLY 99 155 155 GLY GLY E . n B 2 100 GLU 100 156 156 GLU GLU E . n B 2 101 ALA 101 157 157 ALA ALA E . n B 2 102 GLN 102 158 158 GLN GLN E . n B 2 103 LYS 103 159 159 LYS LYS E . n B 2 104 ILE 104 160 160 ILE ILE E . n B 2 105 ASP 105 161 161 ASP ASP E . n B 2 106 ARG 106 162 162 ARG ARG E . n B 2 107 MET 107 163 163 MET MET E . n B 2 108 MET 108 164 164 MET MET E . n B 2 109 GLU 109 165 165 GLU GLU E . n B 2 110 ALA 110 166 166 ALA ALA E . n B 2 111 PHE 111 167 167 PHE PHE E . n B 2 112 ALA 112 168 168 ALA ALA E . n B 2 113 GLN 113 169 169 GLN GLN E . n B 2 114 ARG 114 170 170 ARG ARG E . n B 2 115 TYR 115 171 171 TYR TYR E . n B 2 116 CYS 116 172 172 CYS CYS E . n B 2 117 LEU 117 173 173 LEU LEU E . n B 2 118 CME 118 174 174 CME CME E . n B 2 119 ASN 119 175 175 ASN ASN E . n B 2 120 PRO 120 176 176 PRO PRO E . n B 2 121 GLY 121 177 177 GLY GLY E . n B 2 122 VAL 122 178 178 VAL VAL E . n B 2 123 PHE 123 179 179 PHE PHE E . n B 2 124 GLN 124 180 180 GLN GLN E . n B 2 125 SER 125 181 181 SER SER E . n B 2 126 THR 126 182 182 THR THR E . n B 2 127 ASP 127 183 183 ASP ASP E . n B 2 128 THR 128 184 184 THR THR E . n B 2 129 CYS 129 185 185 CYS CYS E . n B 2 130 TYR 130 186 186 TYR TYR E . n B 2 131 VAL 131 187 187 VAL VAL E . n B 2 132 LEU 132 188 188 LEU LEU E . n B 2 133 SER 133 189 189 SER SER E . n B 2 134 TYR 134 190 190 TYR TYR E . n B 2 135 SER 135 191 191 SER SER E . n B 2 136 VAL 136 192 192 VAL VAL E . n B 2 137 ILE 137 193 193 ILE ILE E . n B 2 138 MET 138 194 194 MET MET E . n B 2 139 LEU 139 195 195 LEU LEU E . n B 2 140 ASN 140 196 196 ASN ASN E . n B 2 141 THR 141 197 197 THR THR E . n B 2 142 ASP 142 198 198 ASP ASP E . n B 2 143 LEU 143 199 199 LEU LEU E . n B 2 144 HIS 144 200 200 HIS HIS E . n B 2 145 ASN 145 201 201 ASN ASN E . n B 2 146 PRO 146 202 202 PRO PRO E . n B 2 147 ASN 147 203 203 ASN ASN E . n B 2 148 VAL 148 204 204 VAL VAL E . n B 2 149 ARG 149 205 205 ARG ARG E . n B 2 150 ASP 150 206 206 ASP ASP E . n B 2 151 LYS 151 207 207 LYS LYS E . n B 2 152 MET 152 208 208 MET MET E . n B 2 153 GLY 153 209 209 GLY GLY E . n B 2 154 LEU 154 210 210 LEU LEU E . n B 2 155 GLU 155 211 211 GLU GLU E . n B 2 156 ARG 156 212 212 ARG ARG E . n B 2 157 PHE 157 213 213 PHE PHE E . n B 2 158 VAL 158 214 214 VAL VAL E . n B 2 159 ALA 159 215 215 ALA ALA E . n B 2 160 MET 160 216 216 MET MET E . n B 2 161 ASN 161 217 217 ASN ASN E . n B 2 162 ARG 162 218 218 ARG ARG E . n B 2 163 GLY 163 219 219 GLY GLY E . n B 2 164 ILE 164 220 220 ILE ILE E . n B 2 165 ASN 165 221 221 ASN ASN E . n B 2 166 GLU 166 222 222 GLU GLU E . n B 2 167 GLY 167 223 223 GLY GLY E . n B 2 168 GLY 168 224 224 GLY GLY E . n B 2 169 ASP 169 225 225 ASP ASP E . n B 2 170 LEU 170 226 226 LEU LEU E . n B 2 171 PRO 171 227 227 PRO PRO E . n B 2 172 GLU 172 228 228 GLU GLU E . n B 2 173 GLU 173 229 229 GLU GLU E . n B 2 174 LEU 174 230 230 LEU LEU E . n B 2 175 LEU 175 231 231 LEU LEU E . n B 2 176 ARG 176 232 232 ARG ARG E . n B 2 177 ASN 177 233 233 ASN ASN E . n B 2 178 LEU 178 234 234 LEU LEU E . n B 2 179 TYR 179 235 235 TYR TYR E . n B 2 180 ASP 180 236 236 ASP ASP E . n B 2 181 SER 181 237 237 SER SER E . n B 2 182 ILE 182 238 238 ILE ILE E . n B 2 183 ARG 183 239 239 ARG ARG E . n B 2 184 ASN 184 240 240 ASN ASN E . n B 2 185 GLU 185 241 241 GLU GLU E . n B 2 186 PRO 186 242 242 PRO PRO E . n B 2 187 PHE 187 243 243 PHE PHE E . n B 2 188 LYS 188 244 244 LYS LYS E . n B 2 189 ILE 189 245 245 ILE ILE E . n B 2 190 PRO 190 246 246 PRO PRO E . n B 2 191 GLU 191 247 247 GLU GLU E . n B 2 192 ASP 192 248 248 ASP ASP E . n B 2 193 ASP 193 249 249 ASP ASP E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 402 402 MG MG ? . D 4 GDP 1 401 401 GDP GDP ? . E 5 AFB 1 403 403 AFB AFB ? . F 6 HOH 1 1 1 HOH HOH ? . F 6 HOH 2 2 2 HOH HOH ? . F 6 HOH 3 3 3 HOH HOH ? . F 6 HOH 4 4 4 HOH HOH ? . F 6 HOH 5 5 5 HOH HOH ? . F 6 HOH 6 6 6 HOH HOH ? . F 6 HOH 7 7 7 HOH HOH ? . F 6 HOH 8 8 8 HOH HOH ? . F 6 HOH 9 9 9 HOH HOH ? . F 6 HOH 10 10 10 HOH HOH ? . F 6 HOH 11 11 11 HOH HOH ? . F 6 HOH 12 12 12 HOH HOH ? . F 6 HOH 13 13 13 HOH HOH ? . F 6 HOH 14 14 14 HOH HOH ? . F 6 HOH 15 15 15 HOH HOH ? . F 6 HOH 16 16 16 HOH HOH ? . F 6 HOH 17 17 17 HOH HOH ? . F 6 HOH 18 18 18 HOH HOH ? . F 6 HOH 19 19 19 HOH HOH ? . F 6 HOH 20 20 20 HOH HOH ? . F 6 HOH 21 21 21 HOH HOH ? . F 6 HOH 22 22 22 HOH HOH ? . F 6 HOH 23 23 23 HOH HOH ? . F 6 HOH 24 24 24 HOH HOH ? . F 6 HOH 25 25 25 HOH HOH ? . F 6 HOH 26 26 26 HOH HOH ? . F 6 HOH 27 27 27 HOH HOH ? . F 6 HOH 28 28 28 HOH HOH ? . F 6 HOH 29 29 29 HOH HOH ? . F 6 HOH 30 30 30 HOH HOH ? . F 6 HOH 31 31 31 HOH HOH ? . F 6 HOH 32 32 32 HOH HOH ? . F 6 HOH 33 33 33 HOH HOH ? . F 6 HOH 34 34 34 HOH HOH ? . F 6 HOH 35 35 35 HOH HOH ? . F 6 HOH 36 36 36 HOH HOH ? . F 6 HOH 37 37 37 HOH HOH ? . F 6 HOH 38 38 38 HOH HOH ? . F 6 HOH 39 39 39 HOH HOH ? . F 6 HOH 40 40 40 HOH HOH ? . F 6 HOH 41 41 41 HOH HOH ? . F 6 HOH 42 42 42 HOH HOH ? . F 6 HOH 43 43 43 HOH HOH ? . F 6 HOH 44 44 44 HOH HOH ? . F 6 HOH 45 45 45 HOH HOH ? . F 6 HOH 46 46 46 HOH HOH ? . F 6 HOH 47 47 47 HOH HOH ? . F 6 HOH 48 48 48 HOH HOH ? . F 6 HOH 49 49 49 HOH HOH ? . F 6 HOH 50 50 50 HOH HOH ? . F 6 HOH 51 51 51 HOH HOH ? . F 6 HOH 52 52 52 HOH HOH ? . F 6 HOH 53 53 53 HOH HOH ? . F 6 HOH 54 54 54 HOH HOH ? . F 6 HOH 55 55 55 HOH HOH ? . F 6 HOH 56 56 56 HOH HOH ? . F 6 HOH 57 57 57 HOH HOH ? . F 6 HOH 58 58 58 HOH HOH ? . F 6 HOH 59 59 59 HOH HOH ? . F 6 HOH 60 60 60 HOH HOH ? . F 6 HOH 61 61 61 HOH HOH ? . F 6 HOH 62 62 62 HOH HOH ? . F 6 HOH 63 63 63 HOH HOH ? . F 6 HOH 64 64 64 HOH HOH ? . F 6 HOH 65 65 65 HOH HOH ? . F 6 HOH 66 66 66 HOH HOH ? . F 6 HOH 67 67 67 HOH HOH ? . F 6 HOH 68 68 68 HOH HOH ? . F 6 HOH 69 69 69 HOH HOH ? . F 6 HOH 70 70 70 HOH HOH ? . F 6 HOH 71 71 71 HOH HOH ? . F 6 HOH 72 72 72 HOH HOH ? . F 6 HOH 73 73 73 HOH HOH ? . F 6 HOH 74 74 74 HOH HOH ? . F 6 HOH 75 75 75 HOH HOH ? . F 6 HOH 76 76 76 HOH HOH ? . F 6 HOH 77 77 77 HOH HOH ? . F 6 HOH 78 78 78 HOH HOH ? . F 6 HOH 79 79 79 HOH HOH ? . F 6 HOH 80 80 80 HOH HOH ? . F 6 HOH 81 81 81 HOH HOH ? . F 6 HOH 82 82 82 HOH HOH ? . F 6 HOH 83 83 83 HOH HOH ? . F 6 HOH 84 84 84 HOH HOH ? . F 6 HOH 85 85 85 HOH HOH ? . F 6 HOH 86 86 86 HOH HOH ? . F 6 HOH 87 87 87 HOH HOH ? . F 6 HOH 88 88 88 HOH HOH ? . F 6 HOH 89 89 89 HOH HOH ? . F 6 HOH 90 90 90 HOH HOH ? . F 6 HOH 91 91 91 HOH HOH ? . F 6 HOH 92 92 92 HOH HOH ? . F 6 HOH 93 93 93 HOH HOH ? . F 6 HOH 94 94 94 HOH HOH ? . F 6 HOH 95 95 95 HOH HOH ? . F 6 HOH 96 96 96 HOH HOH ? . F 6 HOH 97 97 97 HOH HOH ? . F 6 HOH 98 98 98 HOH HOH ? . F 6 HOH 99 99 99 HOH HOH ? . F 6 HOH 100 100 100 HOH HOH ? . F 6 HOH 101 101 101 HOH HOH ? . F 6 HOH 102 102 102 HOH HOH ? . F 6 HOH 103 103 103 HOH HOH ? . F 6 HOH 104 104 104 HOH HOH ? . F 6 HOH 105 105 105 HOH HOH ? . F 6 HOH 106 106 106 HOH HOH ? . F 6 HOH 107 107 107 HOH HOH ? . F 6 HOH 108 108 108 HOH HOH ? . F 6 HOH 109 109 109 HOH HOH ? . F 6 HOH 110 110 110 HOH HOH ? . F 6 HOH 111 111 111 HOH HOH ? . F 6 HOH 112 112 112 HOH HOH ? . F 6 HOH 113 113 113 HOH HOH ? . F 6 HOH 114 114 114 HOH HOH ? . F 6 HOH 115 115 115 HOH HOH ? . F 6 HOH 116 116 116 HOH HOH ? . F 6 HOH 117 117 117 HOH HOH ? . F 6 HOH 118 118 118 HOH HOH ? . F 6 HOH 119 119 119 HOH HOH ? . F 6 HOH 120 120 120 HOH HOH ? . F 6 HOH 121 121 121 HOH HOH ? . F 6 HOH 122 122 122 HOH HOH ? . F 6 HOH 123 123 123 HOH HOH ? . F 6 HOH 124 124 124 HOH HOH ? . F 6 HOH 125 125 125 HOH HOH ? . F 6 HOH 126 126 126 HOH HOH ? . F 6 HOH 127 127 127 HOH HOH ? . F 6 HOH 128 128 128 HOH HOH ? . F 6 HOH 129 129 129 HOH HOH ? . F 6 HOH 130 130 130 HOH HOH ? . F 6 HOH 131 131 131 HOH HOH ? . F 6 HOH 132 132 132 HOH HOH ? . F 6 HOH 133 133 133 HOH HOH ? . F 6 HOH 134 134 134 HOH HOH ? . F 6 HOH 135 135 135 HOH HOH ? . F 6 HOH 136 136 136 HOH HOH ? . F 6 HOH 137 137 137 HOH HOH ? . F 6 HOH 138 138 138 HOH HOH ? . F 6 HOH 139 139 139 HOH HOH ? . F 6 HOH 140 140 140 HOH HOH ? . F 6 HOH 141 141 141 HOH HOH ? . F 6 HOH 142 142 142 HOH HOH ? . F 6 HOH 143 143 143 HOH HOH ? . F 6 HOH 144 144 144 HOH HOH ? . F 6 HOH 145 145 145 HOH HOH ? . F 6 HOH 146 146 146 HOH HOH ? . F 6 HOH 147 147 147 HOH HOH ? . F 6 HOH 148 148 148 HOH HOH ? . F 6 HOH 149 149 149 HOH HOH ? . F 6 HOH 150 150 150 HOH HOH ? . F 6 HOH 151 151 151 HOH HOH ? . F 6 HOH 152 152 152 HOH HOH ? . F 6 HOH 153 153 153 HOH HOH ? . F 6 HOH 154 154 154 HOH HOH ? . F 6 HOH 155 155 155 HOH HOH ? . F 6 HOH 156 156 156 HOH HOH ? . F 6 HOH 157 157 157 HOH HOH ? . F 6 HOH 158 158 158 HOH HOH ? . F 6 HOH 159 159 159 HOH HOH ? . F 6 HOH 160 160 160 HOH HOH ? . F 6 HOH 161 161 161 HOH HOH ? . F 6 HOH 162 162 162 HOH HOH ? . F 6 HOH 163 163 163 HOH HOH ? . F 6 HOH 164 164 164 HOH HOH ? . F 6 HOH 165 165 165 HOH HOH ? . F 6 HOH 166 166 166 HOH HOH ? . F 6 HOH 167 167 167 HOH HOH ? . F 6 HOH 168 168 168 HOH HOH ? . F 6 HOH 169 169 169 HOH HOH ? . F 6 HOH 170 170 170 HOH HOH ? . F 6 HOH 171 171 171 HOH HOH ? . F 6 HOH 172 172 172 HOH HOH ? . F 6 HOH 173 173 173 HOH HOH ? . F 6 HOH 174 174 174 HOH HOH ? . F 6 HOH 175 175 175 HOH HOH ? . F 6 HOH 176 176 176 HOH HOH ? . F 6 HOH 177 177 177 HOH HOH ? . F 6 HOH 178 178 178 HOH HOH ? . F 6 HOH 179 179 179 HOH HOH ? . F 6 HOH 180 180 180 HOH HOH ? . F 6 HOH 181 181 181 HOH HOH ? . F 6 HOH 182 182 182 HOH HOH ? . F 6 HOH 183 183 183 HOH HOH ? . F 6 HOH 184 184 184 HOH HOH ? . F 6 HOH 185 185 185 HOH HOH ? . F 6 HOH 186 186 186 HOH HOH ? . F 6 HOH 187 187 187 HOH HOH ? . F 6 HOH 188 188 188 HOH HOH ? . F 6 HOH 189 189 189 HOH HOH ? . F 6 HOH 190 190 190 HOH HOH ? . F 6 HOH 191 191 191 HOH HOH ? . F 6 HOH 192 192 192 HOH HOH ? . F 6 HOH 193 193 193 HOH HOH ? . F 6 HOH 194 194 194 HOH HOH ? . F 6 HOH 195 195 195 HOH HOH ? . F 6 HOH 196 196 196 HOH HOH ? . F 6 HOH 197 197 197 HOH HOH ? . F 6 HOH 198 198 198 HOH HOH ? . F 6 HOH 199 199 199 HOH HOH ? . F 6 HOH 200 200 200 HOH HOH ? . F 6 HOH 201 201 201 HOH HOH ? . F 6 HOH 202 202 202 HOH HOH ? . F 6 HOH 203 203 203 HOH HOH ? . F 6 HOH 204 204 204 HOH HOH ? . F 6 HOH 205 205 205 HOH HOH ? . F 6 HOH 206 206 206 HOH HOH ? . F 6 HOH 207 207 207 HOH HOH ? . F 6 HOH 208 208 208 HOH HOH ? . F 6 HOH 209 209 209 HOH HOH ? . F 6 HOH 210 210 210 HOH HOH ? . F 6 HOH 211 211 211 HOH HOH ? . F 6 HOH 212 212 212 HOH HOH ? . F 6 HOH 213 213 213 HOH HOH ? . F 6 HOH 214 214 214 HOH HOH ? . F 6 HOH 215 215 215 HOH HOH ? . F 6 HOH 216 216 216 HOH HOH ? . F 6 HOH 217 217 217 HOH HOH ? . F 6 HOH 218 218 218 HOH HOH ? . F 6 HOH 219 219 219 HOH HOH ? . F 6 HOH 220 220 220 HOH HOH ? . F 6 HOH 221 221 221 HOH HOH ? . F 6 HOH 222 222 222 HOH HOH ? . F 6 HOH 223 223 223 HOH HOH ? . F 6 HOH 224 224 224 HOH HOH ? . F 6 HOH 225 225 225 HOH HOH ? . F 6 HOH 226 226 226 HOH HOH ? . F 6 HOH 227 227 227 HOH HOH ? . F 6 HOH 228 228 228 HOH HOH ? . F 6 HOH 229 229 229 HOH HOH ? . F 6 HOH 230 230 230 HOH HOH ? . F 6 HOH 231 231 231 HOH HOH ? . F 6 HOH 232 232 232 HOH HOH ? . F 6 HOH 233 233 233 HOH HOH ? . F 6 HOH 234 234 234 HOH HOH ? . F 6 HOH 235 235 235 HOH HOH ? . F 6 HOH 236 236 236 HOH HOH ? . F 6 HOH 237 237 237 HOH HOH ? . F 6 HOH 238 238 238 HOH HOH ? . F 6 HOH 239 239 239 HOH HOH ? . F 6 HOH 240 240 240 HOH HOH ? . F 6 HOH 241 241 241 HOH HOH ? . F 6 HOH 242 242 242 HOH HOH ? . F 6 HOH 243 243 243 HOH HOH ? . F 6 HOH 244 244 244 HOH HOH ? . F 6 HOH 245 245 245 HOH HOH ? . F 6 HOH 246 246 246 HOH HOH ? . F 6 HOH 247 247 247 HOH HOH ? . F 6 HOH 248 248 248 HOH HOH ? . F 6 HOH 249 249 249 HOH HOH ? . F 6 HOH 250 250 250 HOH HOH ? . F 6 HOH 251 251 251 HOH HOH ? . F 6 HOH 252 252 252 HOH HOH ? . F 6 HOH 253 253 253 HOH HOH ? . F 6 HOH 254 254 254 HOH HOH ? . F 6 HOH 255 255 255 HOH HOH ? . F 6 HOH 256 256 256 HOH HOH ? . F 6 HOH 257 257 257 HOH HOH ? . F 6 HOH 258 258 258 HOH HOH ? . F 6 HOH 259 259 259 HOH HOH ? . F 6 HOH 260 260 260 HOH HOH ? . F 6 HOH 261 261 261 HOH HOH ? . F 6 HOH 262 262 262 HOH HOH ? . F 6 HOH 263 263 263 HOH HOH ? . F 6 HOH 264 264 264 HOH HOH ? . F 6 HOH 265 265 265 HOH HOH ? . F 6 HOH 266 266 266 HOH HOH ? . F 6 HOH 267 267 267 HOH HOH ? . F 6 HOH 268 268 268 HOH HOH ? . F 6 HOH 269 269 269 HOH HOH ? . F 6 HOH 270 270 270 HOH HOH ? . F 6 HOH 271 271 271 HOH HOH ? . F 6 HOH 272 272 272 HOH HOH ? . F 6 HOH 273 273 273 HOH HOH ? . F 6 HOH 274 274 274 HOH HOH ? . F 6 HOH 275 275 275 HOH HOH ? . F 6 HOH 276 276 276 HOH HOH ? . F 6 HOH 277 277 277 HOH HOH ? . F 6 HOH 278 278 278 HOH HOH ? . F 6 HOH 279 279 279 HOH HOH ? . F 6 HOH 280 280 280 HOH HOH ? . F 6 HOH 281 281 281 HOH HOH ? . F 6 HOH 282 282 282 HOH HOH ? . F 6 HOH 283 283 283 HOH HOH ? . F 6 HOH 284 284 284 HOH HOH ? . F 6 HOH 285 285 285 HOH HOH ? . F 6 HOH 286 286 286 HOH HOH ? . # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 . HOH 284 ? F HOH . 2 1 . HOH 286 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-01-20 2 'Structure model' 1 1 2004-02-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 39.7581 16.4036 32.9009 0.1205 0.0999 0.1331 0.0017 0.0006 0.0193 2.4660 1.1175 0.9834 0.2955 0.0856 -0.3094 -0.1089 0.0857 0.1865 0.0551 -0.0822 -0.1570 -0.0539 0.0447 0.1912 'X-RAY DIFFRACTION' 2 ? refined 22.9252 -5.5566 23.5297 0.1815 0.1802 0.0961 -0.0165 0.0115 -0.0744 0.9328 2.2651 1.1294 -0.3000 0.1423 0.4778 0.0756 0.1889 -0.1803 -0.1340 0.0325 -0.0772 0.2090 0.0827 -0.1081 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.selection_details 1 1 A 18 ? A 178 ? ? 'X-RAY DIFFRACTION' ? ? ? 2 1 ? 401 ? ? 402 ? ? 'X-RAY DIFFRACTION' ? ? ? 3 2 E 57 ? E 249 ? ? 'X-RAY DIFFRACTION' ? ? ? # _software.name REFMAC _software.classification refinement _software.version 5.1.24 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE The engineered mutations in the Arno structure (F190Y, A191S, S198D, P208M) are Brefeldin A- sensitizing mutations. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 38 ? ? O . HOH 2 ? ? 1.95 2 1 OD1 A ASN 101 ? ? O . HOH 63 ? ? 2.11 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 SD A MET 22 ? ? CE A MET 22 ? ? 1.324 1.774 -0.450 0.056 N 2 1 CD A GLU 106 ? ? OE1 A GLU 106 ? ? 1.337 1.252 0.085 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 129 ? ? CG A ASP 129 ? ? OD2 A ASP 129 ? ? 124.50 118.30 6.20 0.90 N 2 1 NE E ARG 152 ? ? CZ E ARG 152 ? ? NH2 E ARG 152 ? ? 116.64 120.30 -3.66 0.50 N 3 1 NE E ARG 162 ? ? CZ E ARG 162 ? ? NH1 E ARG 162 ? ? 124.84 120.30 4.54 0.50 N 4 1 NE E ARG 162 ? ? CZ E ARG 162 ? ? NH2 E ARG 162 ? ? 114.48 120.30 -5.82 0.50 N 5 1 CB E ASP 206 ? ? CG E ASP 206 ? ? OD2 E ASP 206 ? ? 126.02 118.30 7.72 0.90 N # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 LYS _pdbx_validate_polymer_linkage.auth_seq_id_1 38 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 THR _pdbx_validate_polymer_linkage.auth_seq_id_2 45 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 14.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 . GDP 401 ? "O5'" ? D GDP 1 "O5'" 2 1 N 1 . GDP 401 ? "C5'" ? D GDP 1 "C5'" 3 1 N 1 . GDP 401 ? "C4'" ? D GDP 1 "C4'" 4 1 N 1 . GDP 401 ? "O4'" ? D GDP 1 "O4'" 5 1 N 1 . GDP 401 ? "C3'" ? D GDP 1 "C3'" 6 1 N 1 . GDP 401 ? "O3'" ? D GDP 1 "O3'" 7 1 N 1 . GDP 401 ? "C2'" ? D GDP 1 "C2'" 8 1 N 1 . GDP 401 ? "O2'" ? D GDP 1 "O2'" 9 1 N 1 . GDP 401 ? "C1'" ? D GDP 1 "C1'" 10 1 N 1 . AFB 403 ? OC7 ? E AFB 1 OC7 11 1 N 1 . AFB 403 ? O16 ? E AFB 1 O16 12 1 N 1 . AFB 403 ? OC1 ? E AFB 1 OC1 13 1 N 1 . AFB 403 ? OC4 ? E AFB 1 OC4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 "GUANOSINE-5'-DIPHOSPHATE" GDP 5 '1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE' AFB 6 water HOH #