data_1R8T # _entry.id 1R8T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1R8T pdb_00001r8t 10.2210/pdb1r8t/pdb RCSB RCSB020579 ? ? WWPDB D_1000020579 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-02-15 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_assembly 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R8T _pdbx_database_status.recvd_initial_deposition_date 2003-10-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1HY2 'Miniprotein MP1 complex with Streptavidin' unspecified PDB 1NOT '1.2 Angstrom structure of GI Conotoxin' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Luo, J.' 1 'Mukherjee, M.' 2 'Fan, X.' 3 'Yang, H.' 4 'Liu, D.' 5 'Khan, R.' 6 'White, M.' 7 'Fox, R.O.' 8 # _citation.id primary _citation.title 'Structure-based design of high affinity miniprotein ligands' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Luo, J.' 1 ? primary 'Mukherjee, M.' 2 ? primary 'Fan, X.' 3 ? primary 'Yang, H.' 4 ? primary 'Liu, D.' 5 ? primary 'Khan, R.' 6 ? primary 'White, M.' 7 ? primary 'Fox, R.O.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description MP1 _entity.formula_weight 1687.003 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'This sequence was identified to be a high affinity streptavidin binding ligand by phage display' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RCCHPQCGAAYSCRK _entity_poly.pdbx_seq_one_letter_code_can RCCHPQCGAAYSCRK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 CYS n 1 3 CYS n 1 4 HIS n 1 5 PRO n 1 6 GLN n 1 7 CYS n 1 8 GLY n 1 9 ALA n 1 10 ALA n 1 11 TYR n 1 12 SER n 1 13 CYS n 1 14 ARG n 1 15 LYS n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LYS 15 15 15 LYS LYS A . n # _exptl.entry_id 1R8T _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.density_Matthews ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1R8T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1R8T _struct.title 'Solution structures of high affinity miniprotein ligands to Streptavidin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R8T _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'miniprotein, streptavidin, high-affinity, UNKNOWN FUNCTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1R8T _struct_ref.pdbx_db_accession 1R8T _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1R8T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 15 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1R8T _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 15 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id CYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 7 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id TYR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 11 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id CYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 7 _struct_conf.end_auth_comp_id TYR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 11 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 7 SG ? ? A CYS 2 A CYS 7 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 13 SG ? ? A CYS 3 A CYS 13 1_555 ? ? ? ? ? ? ? 2.030 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 2 ? CYS A 7 ? CYS A 2 ? 1_555 CYS A 7 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 3 ? CYS A 13 ? CYS A 3 ? 1_555 CYS A 13 ? 1_555 SG SG . . . None 'Disulfide bridge' # _pdbx_entry_details.entry_id 1R8T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 10 ? ? -93.41 41.72 2 1 SER A 12 ? ? -140.54 47.69 3 1 ARG A 14 ? ? -160.01 -48.39 4 2 CYS A 2 ? ? -160.01 118.01 5 2 SER A 12 ? ? -149.32 51.83 6 2 ARG A 14 ? ? -159.96 81.13 7 3 CYS A 2 ? ? -141.42 54.12 8 3 ALA A 10 ? ? -93.24 37.25 9 3 SER A 12 ? ? -149.16 47.19 10 3 ARG A 14 ? ? -160.02 -67.55 11 4 ALA A 10 ? ? -93.30 37.08 12 4 SER A 12 ? ? -149.14 47.19 13 5 CYS A 2 ? ? -144.51 49.54 14 5 ALA A 10 ? ? -94.55 41.85 15 5 SER A 12 ? ? -150.91 47.33 16 5 ARG A 14 ? ? -160.01 -65.69 17 6 TYR A 11 ? ? -66.50 -178.45 18 6 SER A 12 ? ? -152.57 53.25 19 6 ARG A 14 ? ? -135.28 -48.16 20 7 CYS A 2 ? ? -153.68 55.80 21 7 ALA A 10 ? ? -94.26 37.40 22 7 SER A 12 ? ? -144.94 47.13 23 7 CYS A 13 ? ? -69.80 -173.83 24 8 CYS A 2 ? ? -152.74 66.49 25 8 ALA A 10 ? ? -94.20 36.27 26 8 SER A 12 ? ? -147.02 47.12 27 8 ARG A 14 ? ? -159.46 -69.29 28 9 ALA A 10 ? ? -93.51 38.40 29 9 SER A 12 ? ? -146.65 50.20 30 9 CYS A 13 ? ? -59.99 -169.87 31 9 ARG A 14 ? ? -98.29 36.96 32 10 ALA A 10 ? ? -94.95 35.14 33 10 SER A 12 ? ? -152.49 47.54 34 10 ARG A 14 ? ? -152.58 -61.87 35 11 CYS A 2 ? ? -145.61 53.32 36 11 ALA A 10 ? ? -93.89 39.12 37 11 SER A 12 ? ? -142.53 52.17 38 11 ARG A 14 ? ? -159.96 33.44 39 12 ALA A 10 ? ? -94.04 33.75 40 12 SER A 12 ? ? -146.89 50.49 41 13 CYS A 2 ? ? -160.03 98.68 42 13 ALA A 10 ? ? -92.15 36.88 43 14 PRO A 5 ? ? -70.29 40.49 44 14 TYR A 11 ? ? -62.00 -178.06 45 15 TYR A 11 ? ? -69.43 -178.53 46 15 SER A 12 ? ? -141.95 54.20 47 15 ARG A 14 ? ? -159.98 -67.57 48 16 CYS A 2 ? ? -155.50 69.77 49 16 ALA A 10 ? ? -94.13 35.24 50 16 SER A 12 ? ? -149.49 47.04 51 17 ALA A 10 ? ? -94.41 33.30 52 18 TYR A 11 ? ? -60.51 -178.62 53 18 SER A 12 ? ? -154.10 53.30 54 19 ALA A 10 ? ? -92.89 39.51 55 19 SER A 12 ? ? -143.48 49.98 56 19 CYS A 13 ? ? -61.58 85.27 57 20 PRO A 5 ? ? -70.40 40.42 58 20 TYR A 11 ? ? -65.55 -178.11 59 20 SER A 12 ? ? -141.13 47.63 60 20 CYS A 13 ? ? -61.35 85.62 61 21 ALA A 10 ? ? -94.20 36.35 62 21 SER A 12 ? ? -146.97 47.18 63 22 CYS A 2 ? ? -140.19 53.32 64 22 ALA A 10 ? ? -93.90 39.27 65 22 SER A 12 ? ? -142.41 52.00 66 23 ALA A 10 ? ? -92.87 39.68 67 23 SER A 12 ? ? -144.95 56.90 68 23 CYS A 13 ? ? -69.28 94.16 69 23 ARG A 14 ? ? -134.65 -66.49 70 24 ALA A 10 ? ? -92.83 39.93 71 24 SER A 12 ? ? -141.96 47.91 72 24 ARG A 14 ? ? -147.81 -58.03 73 25 ALA A 10 ? ? -93.34 41.72 74 25 SER A 12 ? ? -140.07 47.53 75 26 TYR A 11 ? ? -59.81 -178.76 76 26 SER A 12 ? ? -144.49 47.44 77 26 CYS A 13 ? ? -69.27 -169.62 78 26 ARG A 14 ? ? -141.09 31.20 79 27 ALA A 10 ? ? -92.73 37.25 80 27 SER A 12 ? ? -161.82 73.55 81 28 ALA A 10 ? ? -93.10 40.33 82 28 CYS A 13 ? ? -75.08 -169.25 83 29 ALA A 10 ? ? -92.87 38.49 84 29 SER A 12 ? ? -140.81 47.97 85 29 ARG A 14 ? ? -153.38 79.37 86 30 PRO A 5 ? ? -69.40 41.86 87 30 ALA A 10 ? ? -95.67 35.76 # _pdbx_nmr_ensemble.entry_id 1R8T _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 30 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1R8T _pdbx_nmr_representative.conformer_id 21 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.3 mM MP1, 20mM sodium acetate(d3), pH 5.3, 90% H2O and 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O and 10% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 283 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 5.3 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_details.entry_id 1R8T _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear experiments.' # _pdbx_nmr_refine.entry_id 1R8T _pdbx_nmr_refine.method 'distance geometry & simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal CNS 1.1 'structure solution' Brunger 1 CNS 1.1 refinement Brunger 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 CYS N N N N 41 CYS CA C N R 42 CYS C C N N 43 CYS O O N N 44 CYS CB C N N 45 CYS SG S N N 46 CYS OXT O N N 47 CYS H H N N 48 CYS H2 H N N 49 CYS HA H N N 50 CYS HB2 H N N 51 CYS HB3 H N N 52 CYS HG H N N 53 CYS HXT H N N 54 GLN N N N N 55 GLN CA C N S 56 GLN C C N N 57 GLN O O N N 58 GLN CB C N N 59 GLN CG C N N 60 GLN CD C N N 61 GLN OE1 O N N 62 GLN NE2 N N N 63 GLN OXT O N N 64 GLN H H N N 65 GLN H2 H N N 66 GLN HA H N N 67 GLN HB2 H N N 68 GLN HB3 H N N 69 GLN HG2 H N N 70 GLN HG3 H N N 71 GLN HE21 H N N 72 GLN HE22 H N N 73 GLN HXT H N N 74 GLY N N N N 75 GLY CA C N N 76 GLY C C N N 77 GLY O O N N 78 GLY OXT O N N 79 GLY H H N N 80 GLY H2 H N N 81 GLY HA2 H N N 82 GLY HA3 H N N 83 GLY HXT H N N 84 HIS N N N N 85 HIS CA C N S 86 HIS C C N N 87 HIS O O N N 88 HIS CB C N N 89 HIS CG C Y N 90 HIS ND1 N Y N 91 HIS CD2 C Y N 92 HIS CE1 C Y N 93 HIS NE2 N Y N 94 HIS OXT O N N 95 HIS H H N N 96 HIS H2 H N N 97 HIS HA H N N 98 HIS HB2 H N N 99 HIS HB3 H N N 100 HIS HD1 H N N 101 HIS HD2 H N N 102 HIS HE1 H N N 103 HIS HE2 H N N 104 HIS HXT H N N 105 LYS N N N N 106 LYS CA C N S 107 LYS C C N N 108 LYS O O N N 109 LYS CB C N N 110 LYS CG C N N 111 LYS CD C N N 112 LYS CE C N N 113 LYS NZ N N N 114 LYS OXT O N N 115 LYS H H N N 116 LYS H2 H N N 117 LYS HA H N N 118 LYS HB2 H N N 119 LYS HB3 H N N 120 LYS HG2 H N N 121 LYS HG3 H N N 122 LYS HD2 H N N 123 LYS HD3 H N N 124 LYS HE2 H N N 125 LYS HE3 H N N 126 LYS HZ1 H N N 127 LYS HZ2 H N N 128 LYS HZ3 H N N 129 LYS HXT H N N 130 PRO N N N N 131 PRO CA C N S 132 PRO C C N N 133 PRO O O N N 134 PRO CB C N N 135 PRO CG C N N 136 PRO CD C N N 137 PRO OXT O N N 138 PRO H H N N 139 PRO HA H N N 140 PRO HB2 H N N 141 PRO HB3 H N N 142 PRO HG2 H N N 143 PRO HG3 H N N 144 PRO HD2 H N N 145 PRO HD3 H N N 146 PRO HXT H N N 147 SER N N N N 148 SER CA C N S 149 SER C C N N 150 SER O O N N 151 SER CB C N N 152 SER OG O N N 153 SER OXT O N N 154 SER H H N N 155 SER H2 H N N 156 SER HA H N N 157 SER HB2 H N N 158 SER HB3 H N N 159 SER HG H N N 160 SER HXT H N N 161 TYR N N N N 162 TYR CA C N S 163 TYR C C N N 164 TYR O O N N 165 TYR CB C N N 166 TYR CG C Y N 167 TYR CD1 C Y N 168 TYR CD2 C Y N 169 TYR CE1 C Y N 170 TYR CE2 C Y N 171 TYR CZ C Y N 172 TYR OH O N N 173 TYR OXT O N N 174 TYR H H N N 175 TYR H2 H N N 176 TYR HA H N N 177 TYR HB2 H N N 178 TYR HB3 H N N 179 TYR HD1 H N N 180 TYR HD2 H N N 181 TYR HE1 H N N 182 TYR HE2 H N N 183 TYR HH H N N 184 TYR HXT H N N 185 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 CYS N CA sing N N 39 CYS N H sing N N 40 CYS N H2 sing N N 41 CYS CA C sing N N 42 CYS CA CB sing N N 43 CYS CA HA sing N N 44 CYS C O doub N N 45 CYS C OXT sing N N 46 CYS CB SG sing N N 47 CYS CB HB2 sing N N 48 CYS CB HB3 sing N N 49 CYS SG HG sing N N 50 CYS OXT HXT sing N N 51 GLN N CA sing N N 52 GLN N H sing N N 53 GLN N H2 sing N N 54 GLN CA C sing N N 55 GLN CA CB sing N N 56 GLN CA HA sing N N 57 GLN C O doub N N 58 GLN C OXT sing N N 59 GLN CB CG sing N N 60 GLN CB HB2 sing N N 61 GLN CB HB3 sing N N 62 GLN CG CD sing N N 63 GLN CG HG2 sing N N 64 GLN CG HG3 sing N N 65 GLN CD OE1 doub N N 66 GLN CD NE2 sing N N 67 GLN NE2 HE21 sing N N 68 GLN NE2 HE22 sing N N 69 GLN OXT HXT sing N N 70 GLY N CA sing N N 71 GLY N H sing N N 72 GLY N H2 sing N N 73 GLY CA C sing N N 74 GLY CA HA2 sing N N 75 GLY CA HA3 sing N N 76 GLY C O doub N N 77 GLY C OXT sing N N 78 GLY OXT HXT sing N N 79 HIS N CA sing N N 80 HIS N H sing N N 81 HIS N H2 sing N N 82 HIS CA C sing N N 83 HIS CA CB sing N N 84 HIS CA HA sing N N 85 HIS C O doub N N 86 HIS C OXT sing N N 87 HIS CB CG sing N N 88 HIS CB HB2 sing N N 89 HIS CB HB3 sing N N 90 HIS CG ND1 sing Y N 91 HIS CG CD2 doub Y N 92 HIS ND1 CE1 doub Y N 93 HIS ND1 HD1 sing N N 94 HIS CD2 NE2 sing Y N 95 HIS CD2 HD2 sing N N 96 HIS CE1 NE2 sing Y N 97 HIS CE1 HE1 sing N N 98 HIS NE2 HE2 sing N N 99 HIS OXT HXT sing N N 100 LYS N CA sing N N 101 LYS N H sing N N 102 LYS N H2 sing N N 103 LYS CA C sing N N 104 LYS CA CB sing N N 105 LYS CA HA sing N N 106 LYS C O doub N N 107 LYS C OXT sing N N 108 LYS CB CG sing N N 109 LYS CB HB2 sing N N 110 LYS CB HB3 sing N N 111 LYS CG CD sing N N 112 LYS CG HG2 sing N N 113 LYS CG HG3 sing N N 114 LYS CD CE sing N N 115 LYS CD HD2 sing N N 116 LYS CD HD3 sing N N 117 LYS CE NZ sing N N 118 LYS CE HE2 sing N N 119 LYS CE HE3 sing N N 120 LYS NZ HZ1 sing N N 121 LYS NZ HZ2 sing N N 122 LYS NZ HZ3 sing N N 123 LYS OXT HXT sing N N 124 PRO N CA sing N N 125 PRO N CD sing N N 126 PRO N H sing N N 127 PRO CA C sing N N 128 PRO CA CB sing N N 129 PRO CA HA sing N N 130 PRO C O doub N N 131 PRO C OXT sing N N 132 PRO CB CG sing N N 133 PRO CB HB2 sing N N 134 PRO CB HB3 sing N N 135 PRO CG CD sing N N 136 PRO CG HG2 sing N N 137 PRO CG HG3 sing N N 138 PRO CD HD2 sing N N 139 PRO CD HD3 sing N N 140 PRO OXT HXT sing N N 141 SER N CA sing N N 142 SER N H sing N N 143 SER N H2 sing N N 144 SER CA C sing N N 145 SER CA CB sing N N 146 SER CA HA sing N N 147 SER C O doub N N 148 SER C OXT sing N N 149 SER CB OG sing N N 150 SER CB HB2 sing N N 151 SER CB HB3 sing N N 152 SER OG HG sing N N 153 SER OXT HXT sing N N 154 TYR N CA sing N N 155 TYR N H sing N N 156 TYR N H2 sing N N 157 TYR CA C sing N N 158 TYR CA CB sing N N 159 TYR CA HA sing N N 160 TYR C O doub N N 161 TYR C OXT sing N N 162 TYR CB CG sing N N 163 TYR CB HB2 sing N N 164 TYR CB HB3 sing N N 165 TYR CG CD1 doub Y N 166 TYR CG CD2 sing Y N 167 TYR CD1 CE1 sing Y N 168 TYR CD1 HD1 sing N N 169 TYR CD2 CE2 doub Y N 170 TYR CD2 HD2 sing N N 171 TYR CE1 CZ doub Y N 172 TYR CE1 HE1 sing N N 173 TYR CE2 CZ sing Y N 174 TYR CE2 HE2 sing N N 175 TYR CZ OH sing N N 176 TYR OH HH sing N N 177 TYR OXT HXT sing N N 178 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model UNITYPLUS _pdbx_nmr_spectrometer.field_strength 750 # _atom_sites.entry_id 1R8T _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_