data_1RDH # _entry.id 1RDH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RDH pdb_00001rdh 10.2210/pdb1rdh/pdb WWPDB D_1000176033 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-05-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RDH _pdbx_database_status.recvd_initial_deposition_date 1993-03-05 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Finzel, B.C.' 1 'Chattopadhyay, D.' 2 'Einspahr, H.M.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystallographic analyses of an active HIV-1 ribonuclease H domain show structural features that distinguish it from the inactive form. ; 'Acta Crystallogr.,Sect.D' 49 423 427 1993 ABCRE6 DK 0907-4449 0766 ? 15299518 10.1107/S0907444993002409 1 'Crystal Structure of the Ribonuclease H Domain of HIV-1 Reverse Transcriptase' Science 252 88 ? 1991 SCIEAS US 0036-8075 0038 ? ? ? 2 'A Recombinant Ribonuclease H Domain of HIV-1 Reverse Transcriptase that is Enzymatically Active' J.Biol.Chem. 266 20583 ? 1991 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chattopadhyay, D.' 1 ? primary 'Finzel, B.C.' 2 ? primary 'Munson, S.H.' 3 ? primary 'Evans, D.B.' 4 ? primary 'Sharma, S.K.' 5 ? primary 'Strakalaitus, N.A.' 6 ? primary 'Brunner, D.P.' 7 ? primary 'Eckenrode, F.M.' 8 ? primary 'Dauter, Z.' 9 ? primary 'Betzel, C.' 10 ? primary 'Einspahr, H.M.' 11 ? 1 'Davies II, J.F.' 12 ? 1 'Hostomska, Z.' 13 ? 1 'Hostomsky, Z.' 14 ? 1 'Jordan, S.R.' 15 ? 1 'Matthews, D.A.' 16 ? 2 'Evans, D.B.' 17 ? 2 'Brawn, K.' 18 ? 2 'Deibel Junior, M.R.' 19 ? 2 'Tarpley, W.G.' 20 ? 2 'Sharma, S.K.' 21 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'HIV-1 REVERSE TRANSCRIPTASE (RIBONUCLEASE H DOMAIN)' _entity.formula_weight 16196.366 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec 2.7.7.49 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MPIHDHDHPFHGYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVN IVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKIL ; _entity_poly.pdbx_seq_one_letter_code_can ;MPIHDHDHPFHGYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVN IVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKIL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 ILE n 1 4 HIS n 1 5 ASP n 1 6 HIS n 1 7 ASP n 1 8 HIS n 1 9 PRO n 1 10 PHE n 1 11 HIS n 1 12 GLY n 1 13 TYR n 1 14 GLN n 1 15 LEU n 1 16 GLU n 1 17 LYS n 1 18 GLU n 1 19 PRO n 1 20 ILE n 1 21 VAL n 1 22 GLY n 1 23 ALA n 1 24 GLU n 1 25 THR n 1 26 PHE n 1 27 TYR n 1 28 VAL n 1 29 ASP n 1 30 GLY n 1 31 ALA n 1 32 ALA n 1 33 ASN n 1 34 ARG n 1 35 GLU n 1 36 THR n 1 37 LYS n 1 38 LEU n 1 39 GLY n 1 40 LYS n 1 41 ALA n 1 42 GLY n 1 43 TYR n 1 44 VAL n 1 45 THR n 1 46 ASN n 1 47 LYS n 1 48 GLY n 1 49 ARG n 1 50 GLN n 1 51 LYS n 1 52 VAL n 1 53 VAL n 1 54 PRO n 1 55 LEU n 1 56 THR n 1 57 ASN n 1 58 THR n 1 59 THR n 1 60 ASN n 1 61 GLN n 1 62 LYS n 1 63 THR n 1 64 GLU n 1 65 LEU n 1 66 GLN n 1 67 ALA n 1 68 ILE n 1 69 TYR n 1 70 LEU n 1 71 ALA n 1 72 LEU n 1 73 GLN n 1 74 ASP n 1 75 SER n 1 76 GLY n 1 77 LEU n 1 78 GLU n 1 79 VAL n 1 80 ASN n 1 81 ILE n 1 82 VAL n 1 83 THR n 1 84 ASP n 1 85 SER n 1 86 GLN n 1 87 TYR n 1 88 ALA n 1 89 LEU n 1 90 GLY n 1 91 ILE n 1 92 ILE n 1 93 GLN n 1 94 ALA n 1 95 GLN n 1 96 PRO n 1 97 ASP n 1 98 LYS n 1 99 SER n 1 100 GLU n 1 101 SER n 1 102 GLU n 1 103 LEU n 1 104 VAL n 1 105 ASN n 1 106 GLN n 1 107 ILE n 1 108 ILE n 1 109 GLU n 1 110 GLN n 1 111 LEU n 1 112 ILE n 1 113 LYS n 1 114 LYS n 1 115 GLU n 1 116 LYS n 1 117 VAL n 1 118 TYR n 1 119 LEU n 1 120 ALA n 1 121 TRP n 1 122 VAL n 1 123 PRO n 1 124 ALA n 1 125 HIS n 1 126 LYS n 1 127 GLY n 1 128 ILE n 1 129 GLY n 1 130 GLY n 1 131 ASN n 1 132 GLU n 1 133 GLN n 1 134 VAL n 1 135 ASP n 1 136 LYS n 1 137 LEU n 1 138 VAL n 1 139 SER n 1 140 ALA n 1 141 GLY n 1 142 ILE n 1 143 ARG n 1 144 LYS n 1 145 ILE n 1 146 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 415 ? ? ? A . n A 1 2 PRO 2 416 ? ? ? A . n A 1 3 ILE 3 417 ? ? ? A . n A 1 4 HIS 4 418 ? ? ? A . n A 1 5 ASP 5 419 ? ? ? A . n A 1 6 HIS 6 420 ? ? ? A . n A 1 7 ASP 7 421 ? ? ? A . n A 1 8 HIS 8 422 ? ? ? A . n A 1 9 PRO 9 423 ? ? ? A . n A 1 10 PHE 10 424 ? ? ? A . n A 1 11 HIS 11 425 ? ? ? A . n A 1 12 GLY 12 426 ? ? ? A . n A 1 13 TYR 13 427 427 TYR TYR A . n A 1 14 GLN 14 428 428 GLN GLN A . n A 1 15 LEU 15 429 429 LEU LEU A . n A 1 16 GLU 16 430 430 GLU GLU A . n A 1 17 LYS 17 431 431 LYS LYS A . n A 1 18 GLU 18 432 432 GLU GLU A . n A 1 19 PRO 19 433 433 PRO PRO A . n A 1 20 ILE 20 434 434 ILE ILE A . n A 1 21 VAL 21 435 435 VAL VAL A . n A 1 22 GLY 22 436 436 GLY GLY A . n A 1 23 ALA 23 437 437 ALA ALA A . n A 1 24 GLU 24 438 438 GLU GLU A . n A 1 25 THR 25 439 439 THR THR A . n A 1 26 PHE 26 440 440 PHE PHE A . n A 1 27 TYR 27 441 441 TYR TYR A . n A 1 28 VAL 28 442 442 VAL VAL A . n A 1 29 ASP 29 443 443 ASP ASP A . n A 1 30 GLY 30 444 444 GLY GLY A . n A 1 31 ALA 31 445 445 ALA ALA A . n A 1 32 ALA 32 446 446 ALA ALA A . n A 1 33 ASN 33 447 447 ASN ASN A . n A 1 34 ARG 34 448 448 ARG ARG A . n A 1 35 GLU 35 449 449 GLU GLU A . n A 1 36 THR 36 450 450 THR THR A . n A 1 37 LYS 37 451 451 LYS LYS A . n A 1 38 LEU 38 452 452 LEU LEU A . n A 1 39 GLY 39 453 453 GLY GLY A . n A 1 40 LYS 40 454 454 LYS LYS A . n A 1 41 ALA 41 455 455 ALA ALA A . n A 1 42 GLY 42 456 456 GLY GLY A . n A 1 43 TYR 43 457 457 TYR TYR A . n A 1 44 VAL 44 458 458 VAL VAL A . n A 1 45 THR 45 459 459 THR THR A . n A 1 46 ASN 46 460 460 ASN ASN A . n A 1 47 LYS 47 461 461 LYS LYS A . n A 1 48 GLY 48 462 462 GLY GLY A . n A 1 49 ARG 49 463 463 ARG ARG A . n A 1 50 GLN 50 464 464 GLN GLN A . n A 1 51 LYS 51 465 465 LYS LYS A . n A 1 52 VAL 52 466 466 VAL VAL A . n A 1 53 VAL 53 467 467 VAL VAL A . n A 1 54 PRO 54 468 468 PRO PRO A . n A 1 55 LEU 55 469 469 LEU LEU A . n A 1 56 THR 56 470 470 THR THR A . n A 1 57 ASN 57 471 471 ASN ASN A . n A 1 58 THR 58 472 472 THR THR A . n A 1 59 THR 59 473 473 THR THR A . n A 1 60 ASN 60 474 474 ASN ASN A . n A 1 61 GLN 61 475 475 GLN GLN A . n A 1 62 LYS 62 476 476 LYS LYS A . n A 1 63 THR 63 477 477 THR THR A . n A 1 64 GLU 64 478 478 GLU GLU A . n A 1 65 LEU 65 479 479 LEU LEU A . n A 1 66 GLN 66 480 480 GLN GLN A . n A 1 67 ALA 67 481 481 ALA ALA A . n A 1 68 ILE 68 482 482 ILE ILE A . n A 1 69 TYR 69 483 483 TYR TYR A . n A 1 70 LEU 70 484 484 LEU LEU A . n A 1 71 ALA 71 485 485 ALA ALA A . n A 1 72 LEU 72 486 486 LEU LEU A . n A 1 73 GLN 73 487 487 GLN GLN A . n A 1 74 ASP 74 488 488 ASP ASP A . n A 1 75 SER 75 489 489 SER SER A . n A 1 76 GLY 76 490 490 GLY GLY A . n A 1 77 LEU 77 491 491 LEU LEU A . n A 1 78 GLU 78 492 492 GLU GLU A . n A 1 79 VAL 79 493 493 VAL VAL A . n A 1 80 ASN 80 494 494 ASN ASN A . n A 1 81 ILE 81 495 495 ILE ILE A . n A 1 82 VAL 82 496 496 VAL VAL A . n A 1 83 THR 83 497 497 THR THR A . n A 1 84 ASP 84 498 498 ASP ASP A . n A 1 85 SER 85 499 499 SER SER A . n A 1 86 GLN 86 500 500 GLN GLN A . n A 1 87 TYR 87 501 501 TYR TYR A . n A 1 88 ALA 88 502 502 ALA ALA A . n A 1 89 LEU 89 503 503 LEU LEU A . n A 1 90 GLY 90 504 504 GLY GLY A . n A 1 91 ILE 91 505 505 ILE ILE A . n A 1 92 ILE 92 506 506 ILE ILE A . n A 1 93 GLN 93 507 507 GLN GLN A . n A 1 94 ALA 94 508 508 ALA ALA A . n A 1 95 GLN 95 509 509 GLN GLN A . n A 1 96 PRO 96 510 510 PRO PRO A . n A 1 97 ASP 97 511 511 ASP ASP A . n A 1 98 LYS 98 512 512 LYS LYS A . n A 1 99 SER 99 513 513 SER SER A . n A 1 100 GLU 100 514 514 GLU GLU A . n A 1 101 SER 101 515 515 SER SER A . n A 1 102 GLU 102 516 516 GLU GLU A . n A 1 103 LEU 103 517 517 LEU LEU A . n A 1 104 VAL 104 518 518 VAL VAL A . n A 1 105 ASN 105 519 519 ASN ASN A . n A 1 106 GLN 106 520 520 GLN GLN A . n A 1 107 ILE 107 521 521 ILE ILE A . n A 1 108 ILE 108 522 522 ILE ILE A . n A 1 109 GLU 109 523 523 GLU GLU A . n A 1 110 GLN 110 524 524 GLN GLN A . n A 1 111 LEU 111 525 525 LEU LEU A . n A 1 112 ILE 112 526 526 ILE ILE A . n A 1 113 LYS 113 527 527 LYS LYS A . n A 1 114 LYS 114 528 528 LYS LYS A . n A 1 115 GLU 115 529 529 GLU GLU A . n A 1 116 LYS 116 530 530 LYS LYS A . n A 1 117 VAL 117 531 531 VAL VAL A . n A 1 118 TYR 118 532 532 TYR TYR A . n A 1 119 LEU 119 533 533 LEU LEU A . n A 1 120 ALA 120 534 534 ALA ALA A . n A 1 121 TRP 121 535 535 TRP TRP A . n A 1 122 VAL 122 536 536 VAL VAL A . n A 1 123 PRO 123 537 537 PRO PRO A . n A 1 124 ALA 124 538 538 ALA ALA A . n A 1 125 HIS 125 539 ? ? ? A . n A 1 126 LYS 126 540 ? ? ? A . n A 1 127 GLY 127 541 ? ? ? A . n A 1 128 ILE 128 542 542 ILE ILE A . n A 1 129 GLY 129 543 543 GLY GLY A . n A 1 130 GLY 130 544 544 GLY GLY A . n A 1 131 ASN 131 545 545 ASN ASN A . n A 1 132 GLU 132 546 546 GLU GLU A . n A 1 133 GLN 133 547 547 GLN GLN A . n A 1 134 VAL 134 548 548 VAL VAL A . n A 1 135 ASP 135 549 549 ASP ASP A . n A 1 136 LYS 136 550 550 LYS LYS A . n A 1 137 LEU 137 551 551 LEU LEU A . n A 1 138 VAL 138 552 552 VAL VAL A . n A 1 139 SER 139 553 553 SER SER A . n A 1 140 ALA 140 554 554 ALA ALA A . n A 1 141 GLY 141 555 555 GLY GLY A . n A 1 142 ILE 142 556 556 ILE ILE A . n A 1 143 ARG 143 557 ? ? ? A . n A 1 144 LYS 144 558 ? ? ? A . n A 1 145 ILE 145 559 ? ? ? A . n A 1 146 LEU 146 560 ? ? ? A . n B 1 1 MET 1 415 ? ? ? B . n B 1 2 PRO 2 416 ? ? ? B . n B 1 3 ILE 3 417 ? ? ? B . n B 1 4 HIS 4 418 ? ? ? B . n B 1 5 ASP 5 419 ? ? ? B . n B 1 6 HIS 6 420 ? ? ? B . n B 1 7 ASP 7 421 ? ? ? B . n B 1 8 HIS 8 422 ? ? ? B . n B 1 9 PRO 9 423 ? ? ? B . n B 1 10 PHE 10 424 ? ? ? B . n B 1 11 HIS 11 425 ? ? ? B . n B 1 12 GLY 12 426 ? ? ? B . n B 1 13 TYR 13 427 427 TYR TYR B . n B 1 14 GLN 14 428 428 GLN GLN B . n B 1 15 LEU 15 429 429 LEU LEU B . n B 1 16 GLU 16 430 430 GLU GLU B . n B 1 17 LYS 17 431 431 LYS LYS B . n B 1 18 GLU 18 432 432 GLU GLU B . n B 1 19 PRO 19 433 433 PRO PRO B . n B 1 20 ILE 20 434 434 ILE ILE B . n B 1 21 VAL 21 435 435 VAL VAL B . n B 1 22 GLY 22 436 436 GLY GLY B . n B 1 23 ALA 23 437 437 ALA ALA B . n B 1 24 GLU 24 438 438 GLU GLU B . n B 1 25 THR 25 439 439 THR THR B . n B 1 26 PHE 26 440 440 PHE PHE B . n B 1 27 TYR 27 441 441 TYR TYR B . n B 1 28 VAL 28 442 442 VAL VAL B . n B 1 29 ASP 29 443 443 ASP ASP B . n B 1 30 GLY 30 444 444 GLY GLY B . n B 1 31 ALA 31 445 445 ALA ALA B . n B 1 32 ALA 32 446 446 ALA ALA B . n B 1 33 ASN 33 447 447 ASN ASN B . n B 1 34 ARG 34 448 448 ARG ARG B . n B 1 35 GLU 35 449 449 GLU GLU B . n B 1 36 THR 36 450 450 THR THR B . n B 1 37 LYS 37 451 451 LYS LYS B . n B 1 38 LEU 38 452 452 LEU LEU B . n B 1 39 GLY 39 453 453 GLY GLY B . n B 1 40 LYS 40 454 454 LYS LYS B . n B 1 41 ALA 41 455 455 ALA ALA B . n B 1 42 GLY 42 456 456 GLY GLY B . n B 1 43 TYR 43 457 457 TYR TYR B . n B 1 44 VAL 44 458 458 VAL VAL B . n B 1 45 THR 45 459 459 THR THR B . n B 1 46 ASN 46 460 460 ASN ASN B . n B 1 47 LYS 47 461 461 LYS LYS B . n B 1 48 GLY 48 462 462 GLY GLY B . n B 1 49 ARG 49 463 463 ARG ARG B . n B 1 50 GLN 50 464 464 GLN GLN B . n B 1 51 LYS 51 465 465 LYS LYS B . n B 1 52 VAL 52 466 466 VAL VAL B . n B 1 53 VAL 53 467 467 VAL VAL B . n B 1 54 PRO 54 468 468 PRO PRO B . n B 1 55 LEU 55 469 469 LEU LEU B . n B 1 56 THR 56 470 470 THR THR B . n B 1 57 ASN 57 471 471 ASN ASN B . n B 1 58 THR 58 472 472 THR THR B . n B 1 59 THR 59 473 473 THR THR B . n B 1 60 ASN 60 474 474 ASN ASN B . n B 1 61 GLN 61 475 475 GLN GLN B . n B 1 62 LYS 62 476 476 LYS LYS B . n B 1 63 THR 63 477 477 THR THR B . n B 1 64 GLU 64 478 478 GLU GLU B . n B 1 65 LEU 65 479 479 LEU LEU B . n B 1 66 GLN 66 480 480 GLN GLN B . n B 1 67 ALA 67 481 481 ALA ALA B . n B 1 68 ILE 68 482 482 ILE ILE B . n B 1 69 TYR 69 483 483 TYR TYR B . n B 1 70 LEU 70 484 484 LEU LEU B . n B 1 71 ALA 71 485 485 ALA ALA B . n B 1 72 LEU 72 486 486 LEU LEU B . n B 1 73 GLN 73 487 487 GLN GLN B . n B 1 74 ASP 74 488 488 ASP ASP B . n B 1 75 SER 75 489 489 SER SER B . n B 1 76 GLY 76 490 490 GLY GLY B . n B 1 77 LEU 77 491 491 LEU LEU B . n B 1 78 GLU 78 492 492 GLU GLU B . n B 1 79 VAL 79 493 493 VAL VAL B . n B 1 80 ASN 80 494 494 ASN ASN B . n B 1 81 ILE 81 495 495 ILE ILE B . n B 1 82 VAL 82 496 496 VAL VAL B . n B 1 83 THR 83 497 497 THR THR B . n B 1 84 ASP 84 498 498 ASP ASP B . n B 1 85 SER 85 499 499 SER SER B . n B 1 86 GLN 86 500 500 GLN GLN B . n B 1 87 TYR 87 501 501 TYR TYR B . n B 1 88 ALA 88 502 502 ALA ALA B . n B 1 89 LEU 89 503 503 LEU LEU B . n B 1 90 GLY 90 504 504 GLY GLY B . n B 1 91 ILE 91 505 505 ILE ILE B . n B 1 92 ILE 92 506 506 ILE ILE B . n B 1 93 GLN 93 507 507 GLN GLN B . n B 1 94 ALA 94 508 508 ALA ALA B . n B 1 95 GLN 95 509 509 GLN GLN B . n B 1 96 PRO 96 510 510 PRO PRO B . n B 1 97 ASP 97 511 511 ASP ASP B . n B 1 98 LYS 98 512 512 LYS LYS B . n B 1 99 SER 99 513 513 SER SER B . n B 1 100 GLU 100 514 514 GLU GLU B . n B 1 101 SER 101 515 515 SER SER B . n B 1 102 GLU 102 516 516 GLU GLU B . n B 1 103 LEU 103 517 517 LEU LEU B . n B 1 104 VAL 104 518 518 VAL VAL B . n B 1 105 ASN 105 519 519 ASN ASN B . n B 1 106 GLN 106 520 520 GLN GLN B . n B 1 107 ILE 107 521 521 ILE ILE B . n B 1 108 ILE 108 522 522 ILE ILE B . n B 1 109 GLU 109 523 523 GLU GLU B . n B 1 110 GLN 110 524 524 GLN GLN B . n B 1 111 LEU 111 525 525 LEU LEU B . n B 1 112 ILE 112 526 526 ILE ILE B . n B 1 113 LYS 113 527 527 LYS LYS B . n B 1 114 LYS 114 528 528 LYS LYS B . n B 1 115 GLU 115 529 529 GLU GLU B . n B 1 116 LYS 116 530 530 LYS LYS B . n B 1 117 VAL 117 531 531 VAL VAL B . n B 1 118 TYR 118 532 532 TYR TYR B . n B 1 119 LEU 119 533 533 LEU LEU B . n B 1 120 ALA 120 534 534 ALA ALA B . n B 1 121 TRP 121 535 535 TRP TRP B . n B 1 122 VAL 122 536 536 VAL VAL B . n B 1 123 PRO 123 537 537 PRO PRO B . n B 1 124 ALA 124 538 538 ALA ALA B . n B 1 125 HIS 125 539 ? ? ? B . n B 1 126 LYS 126 540 ? ? ? B . n B 1 127 GLY 127 541 ? ? ? B . n B 1 128 ILE 128 542 542 ILE ILE B . n B 1 129 GLY 129 543 543 GLY GLY B . n B 1 130 GLY 130 544 544 GLY GLY B . n B 1 131 ASN 131 545 545 ASN ASN B . n B 1 132 GLU 132 546 546 GLU GLU B . n B 1 133 GLN 133 547 547 GLN GLN B . n B 1 134 VAL 134 548 548 VAL VAL B . n B 1 135 ASP 135 549 549 ASP ASP B . n B 1 136 LYS 136 550 550 LYS LYS B . n B 1 137 LEU 137 551 551 LEU LEU B . n B 1 138 VAL 138 552 552 VAL VAL B . n B 1 139 SER 139 553 553 SER SER B . n B 1 140 ALA 140 554 554 ALA ALA B . n B 1 141 GLY 141 555 555 GLY GLY B . n B 1 142 ILE 142 556 556 ILE ILE B . n B 1 143 ARG 143 557 ? ? ? B . n B 1 144 LYS 144 558 ? ? ? B . n B 1 145 ILE 145 559 ? ? ? B . n B 1 146 LEU 146 560 ? ? ? B . n # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1RDH _cell.length_a 52.030 _cell.length_b 52.030 _cell.length_c 113.920 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RDH _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 # _exptl.entry_id 1RDH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.23 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _refine.entry_id 1RDH _refine.ls_number_reflns_obs 8147 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 2.8 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2150000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 254 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 254 _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.026 0.030 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.052 0.040 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.054 0.050 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 0.995 1.500 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 1.699 3.000 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 1.763 2.000 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 2.899 4.000 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.018 0.030 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.383 0.300 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.229 0.400 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.264 0.400 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.249 0.400 ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.500 3.000 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 10.80 5.000 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor 16.70 10.00 ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1RDH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1RDH _struct.title ;CRYSTALLOGRAPHIC ANALYSES OF AN ACTIVE HIV-1 RIBONUCLEASE H DOMAIN SHOW STRUCTURAL FEATURES THAT DISTINGUISH IT FROM THE INACTIVE FORM ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RDH _struct_keywords.pdbx_keywords 'HYDROLASE(ENDORIBONUCLEASE)' _struct_keywords.text 'HYDROLASE(ENDORIBONUCLEASE)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1B1 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P03366 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;FFREDLAFLQGKAREFSSEQTRANSPTISSEQTRANSPTRRELQVWGRDNNSPSEAGADRQGTVSFNFPQITLWQRPLVT IKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQ IGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGW KGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYE LHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEP VHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPI QKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTT NQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVS AGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVI LVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVES MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRNP LWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RDH A 13 ? 146 ? P03366 594 ? 727 ? 427 560 2 1 1RDH B 13 ? 146 ? P03366 594 ? 727 ? 427 560 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A 2 1 B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 ;THERE ARE TWO MOLECULES IN THE ASYMMETRIC UNIT. THEY HAVE BEEN ASSIGNED CHAIN INDICATORS *A* AND *B*. THE RESIDUE NUMBERING IS BASED ON THE REVERSE TRANSCRIPTASE SEQUENCE. ; ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA THR A 59 ? ASP A 74 ? THR A 473 ASP A 488 1 ? 16 HELX_P HELX_P2 BA SER A 85 ? GLN A 95 ? SER A 499 GLN A 509 1 ? 11 HELX_P HELX_P3 DA SER A 101 ? LYS A 114 ? SER A 515 LYS A 528 1 ? 14 HELX_P HELX_P4 EA GLY A 130 ? SER A 139 ? GLY A 544 SER A 553 1 ? 10 HELX_P HELX_P5 AB THR B 59 ? ASP B 74 ? THR B 473 ASP B 488 1 ? 16 HELX_P HELX_P6 BB SER B 85 ? GLN B 95 ? SER B 499 GLN B 509 1 ? 11 HELX_P HELX_P7 DB SER B 101 ? LYS B 114 ? SER B 515 LYS B 528 1 ? 14 HELX_P HELX_P8 EB GLY B 129 ? SER B 139 ? GLY B 543 SER B 553 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details IA ? 5 ? IB ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense IA 1 2 ? anti-parallel IA 2 3 ? anti-parallel IA 3 4 ? parallel IA 4 5 ? parallel IB 1 2 ? anti-parallel IB 2 3 ? anti-parallel IB 3 4 ? parallel IB 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id IA 1 ARG A 49 ? LEU A 55 ? ARG A 463 LEU A 469 IA 2 LEU A 38 ? THR A 45 ? LEU A 452 THR A 459 IA 3 GLU A 24 ? ASN A 33 ? GLU A 438 ASN A 447 IA 4 LEU A 77 ? THR A 83 ? LEU A 491 THR A 497 IA 5 LYS A 116 ? VAL A 122 ? LYS A 530 VAL A 536 IB 1 ARG B 49 ? LEU B 55 ? ARG B 463 LEU B 469 IB 2 LEU B 38 ? THR B 45 ? LEU B 452 THR B 459 IB 3 GLU B 24 ? ASN B 33 ? GLU B 438 ASN B 447 IB 4 LEU B 77 ? THR B 83 ? LEU B 491 THR B 497 IB 5 LYS B 116 ? VAL B 122 ? LYS B 530 VAL B 536 # _pdbx_entry_details.entry_id 1RDH _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS RECOMBINANT VERSION OF THE HIV-1 RNASE H DOMAIN WAS PREPARED WITH AN N-TERMINAL SEQUENCE TO SIMPLIFY ISOLATION. THIS SEQUENCE MET-PRO-ILE-HIS-ASP-HIS-ASP-HIS-PRO-PHE-HIS -GLY PRECEDING TYR 427 IS COMPLETELY DISORDERED IN THE CRYSTAL AND NOT INCLUDED IN THIS ENTRY. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 415 ? A MET 1 2 1 Y 1 A PRO 416 ? A PRO 2 3 1 Y 1 A ILE 417 ? A ILE 3 4 1 Y 1 A HIS 418 ? A HIS 4 5 1 Y 1 A ASP 419 ? A ASP 5 6 1 Y 1 A HIS 420 ? A HIS 6 7 1 Y 1 A ASP 421 ? A ASP 7 8 1 Y 1 A HIS 422 ? A HIS 8 9 1 Y 1 A PRO 423 ? A PRO 9 10 1 Y 1 A PHE 424 ? A PHE 10 11 1 Y 1 A HIS 425 ? A HIS 11 12 1 Y 1 A GLY 426 ? A GLY 12 13 1 Y 1 A HIS 539 ? A HIS 125 14 1 Y 1 A LYS 540 ? A LYS 126 15 1 Y 1 A GLY 541 ? A GLY 127 16 1 Y 1 A ARG 557 ? A ARG 143 17 1 Y 1 A LYS 558 ? A LYS 144 18 1 Y 1 A ILE 559 ? A ILE 145 19 1 Y 1 A LEU 560 ? A LEU 146 20 1 Y 1 B MET 415 ? B MET 1 21 1 Y 1 B PRO 416 ? B PRO 2 22 1 Y 1 B ILE 417 ? B ILE 3 23 1 Y 1 B HIS 418 ? B HIS 4 24 1 Y 1 B ASP 419 ? B ASP 5 25 1 Y 1 B HIS 420 ? B HIS 6 26 1 Y 1 B ASP 421 ? B ASP 7 27 1 Y 1 B HIS 422 ? B HIS 8 28 1 Y 1 B PRO 423 ? B PRO 9 29 1 Y 1 B PHE 424 ? B PHE 10 30 1 Y 1 B HIS 425 ? B HIS 11 31 1 Y 1 B GLY 426 ? B GLY 12 32 1 Y 1 B HIS 539 ? B HIS 125 33 1 Y 1 B LYS 540 ? B LYS 126 34 1 Y 1 B GLY 541 ? B GLY 127 35 1 Y 1 B ARG 557 ? B ARG 143 36 1 Y 1 B LYS 558 ? B LYS 144 37 1 Y 1 B ILE 559 ? B ILE 145 38 1 Y 1 B LEU 560 ? B LEU 146 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'CA ATOMS ONLY' B 'CA ATOMS ONLY' # _atom_sites.entry_id 1RDH _atom_sites.fract_transf_matrix[1][1] 0.019220 _atom_sites.fract_transf_matrix[1][2] 0.011096 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022193 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008778 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_type.symbol C # loop_