data_1REP # _entry.id 1REP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1REP pdb_00001rep 10.2210/pdb1rep/pdb NDB PD0107 ? ? RCSB RCSB000974 ? ? WWPDB D_1000000974 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-02-09 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2018-03-14 6 'Structure model' 1 5 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' 'Database references' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' struct_conf 2 4 'Structure model' struct_conf_type 3 5 'Structure model' struct_ref_seq_dif 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 7 6 'Structure model' pdbx_struct_conn_angle 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_ref_seq_dif 10 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_struct_ref_seq_dif.details' 2 6 'Structure model' '_database_2.pdbx_DOI' 3 6 'Structure model' '_database_2.pdbx_database_accession' 4 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.value' 19 6 'Structure model' '_struct_conn.pdbx_dist_value' 20 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 34 6 'Structure model' '_struct_ref_seq_dif.details' 35 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1REP _pdbx_database_status.recvd_initial_deposition_date 1999-04-29 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Komori, H.' 1 'Matsunaga, F.' 2 'Higuchi, Y.' 3 'Ishiai, M.' 4 'Wada, C.' 5 'Miki, K.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution.' 'EMBO J.' 18 4597 4607 1999 EMJODG UK 0261-4189 0897 ? 10469640 10.1093/emboj/18.17.4597 1 ;Crystallization and preliminary X-ray diffraction studies of a replication initiator protein (RepE54) of the mini-F plasmid complexed with iteron DNA ; 'J.Biochem.(Tokyo)' 125 24 26 1999 JOBIAO JA 0021-924X 0418 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Komori, H.' 1 ? primary 'Matsunaga, F.' 2 ? primary 'Higuchi, Y.' 3 ? primary 'Ishiai, M.' 4 ? primary 'Wada, C.' 5 ? primary 'Miki, K.' 6 ? 1 'Komori, H.' 7 ? 1 'Sasai, N.' 8 ? 1 'Matsunaga, F.' 9 ? 1 'Wada, C.' 10 ? 1 'Miki, K.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3') ; 6687.328 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3') ; 6807.401 1 ? ? ? ? 3 polymer man 'PROTEIN (REPLICATION INITIATION PROTEIN)' 29343.527 1 ? R118P ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 20 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ITERON 2 ITERON 3 REPE54 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DC)(DC)(DT)(DG)(DT)(DG)(DA)(DC)(DA)(DA)(DA)(DT)(DT)(DG)(DC)(DC)(DC)(DT)(DC)(DA) (DG)(DT) ; CCTGTGACAAATTGCCCTCAGT A ? 2 polydeoxyribonucleotide no no ;(DC)(DT)(DG)(DA)(DG)(DG)(DG)(DC)(DA)(DA)(DT)(DT)(DT)(DG)(DT)(DC)(DA)(DC)(DA)(DG) (DG)(DT) ; CTGAGGGCAATTTGTCACAGGT B ? 3 'polypeptide(L)' no no ;MAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASK DIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNP YAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVF SFRDITSMTTG ; ;MAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASK DIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNP YAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVF SFRDITSMTTG ; C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DT n 1 4 DG n 1 5 DT n 1 6 DG n 1 7 DA n 1 8 DC n 1 9 DA n 1 10 DA n 1 11 DA n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DC n 1 16 DC n 1 17 DC n 1 18 DT n 1 19 DC n 1 20 DA n 1 21 DG n 1 22 DT n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DA n 2 5 DG n 2 6 DG n 2 7 DG n 2 8 DC n 2 9 DA n 2 10 DA n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DG n 2 15 DT n 2 16 DC n 2 17 DA n 2 18 DC n 2 19 DA n 2 20 DG n 2 21 DG n 2 22 DT n 3 1 MET n 3 2 ALA n 3 3 GLU n 3 4 THR n 3 5 ALA n 3 6 VAL n 3 7 ILE n 3 8 ASN n 3 9 HIS n 3 10 LYS n 3 11 LYS n 3 12 ARG n 3 13 LYS n 3 14 ASN n 3 15 SER n 3 16 PRO n 3 17 ARG n 3 18 ILE n 3 19 VAL n 3 20 GLN n 3 21 SER n 3 22 ASN n 3 23 ASP n 3 24 LEU n 3 25 THR n 3 26 GLU n 3 27 ALA n 3 28 ALA n 3 29 TYR n 3 30 SER n 3 31 LEU n 3 32 SER n 3 33 ARG n 3 34 ASP n 3 35 GLN n 3 36 LYS n 3 37 ARG n 3 38 MET n 3 39 LEU n 3 40 TYR n 3 41 LEU n 3 42 PHE n 3 43 VAL n 3 44 ASP n 3 45 GLN n 3 46 ILE n 3 47 ARG n 3 48 LYS n 3 49 SER n 3 50 ASP n 3 51 GLY n 3 52 THR n 3 53 LEU n 3 54 GLN n 3 55 GLU n 3 56 HIS n 3 57 ASP n 3 58 GLY n 3 59 ILE n 3 60 CYS n 3 61 GLU n 3 62 ILE n 3 63 HIS n 3 64 VAL n 3 65 ALA n 3 66 LYS n 3 67 TYR n 3 68 ALA n 3 69 GLU n 3 70 ILE n 3 71 PHE n 3 72 GLY n 3 73 LEU n 3 74 THR n 3 75 SER n 3 76 ALA n 3 77 GLU n 3 78 ALA n 3 79 SER n 3 80 LYS n 3 81 ASP n 3 82 ILE n 3 83 ARG n 3 84 GLN n 3 85 ALA n 3 86 LEU n 3 87 LYS n 3 88 SER n 3 89 PHE n 3 90 ALA n 3 91 GLY n 3 92 LYS n 3 93 GLU n 3 94 VAL n 3 95 VAL n 3 96 PHE n 3 97 TYR n 3 98 ARG n 3 99 PRO n 3 100 GLU n 3 101 GLU n 3 102 ASP n 3 103 ALA n 3 104 GLY n 3 105 ASP n 3 106 GLU n 3 107 LYS n 3 108 GLY n 3 109 TYR n 3 110 GLU n 3 111 SER n 3 112 PHE n 3 113 PRO n 3 114 TRP n 3 115 PHE n 3 116 ILE n 3 117 LYS n 3 118 PRO n 3 119 ALA n 3 120 HIS n 3 121 SER n 3 122 PRO n 3 123 SER n 3 124 ARG n 3 125 GLY n 3 126 LEU n 3 127 TYR n 3 128 SER n 3 129 VAL n 3 130 HIS n 3 131 ILE n 3 132 ASN n 3 133 PRO n 3 134 TYR n 3 135 LEU n 3 136 ILE n 3 137 PRO n 3 138 PHE n 3 139 PHE n 3 140 ILE n 3 141 GLY n 3 142 LEU n 3 143 GLN n 3 144 ASN n 3 145 ARG n 3 146 PHE n 3 147 THR n 3 148 GLN n 3 149 PHE n 3 150 ARG n 3 151 LEU n 3 152 SER n 3 153 GLU n 3 154 THR n 3 155 LYS n 3 156 GLU n 3 157 ILE n 3 158 THR n 3 159 ASN n 3 160 PRO n 3 161 TYR n 3 162 ALA n 3 163 MET n 3 164 ARG n 3 165 LEU n 3 166 TYR n 3 167 GLU n 3 168 SER n 3 169 LEU n 3 170 CYS n 3 171 GLN n 3 172 TYR n 3 173 ARG n 3 174 LYS n 3 175 PRO n 3 176 ASP n 3 177 GLY n 3 178 SER n 3 179 GLY n 3 180 ILE n 3 181 VAL n 3 182 SER n 3 183 LEU n 3 184 LYS n 3 185 ILE n 3 186 ASP n 3 187 TRP n 3 188 ILE n 3 189 ILE n 3 190 GLU n 3 191 ARG n 3 192 TYR n 3 193 GLN n 3 194 LEU n 3 195 PRO n 3 196 GLN n 3 197 SER n 3 198 TYR n 3 199 GLN n 3 200 ARG n 3 201 MET n 3 202 PRO n 3 203 ASP n 3 204 PHE n 3 205 ARG n 3 206 ARG n 3 207 ARG n 3 208 PHE n 3 209 LEU n 3 210 GLN n 3 211 VAL n 3 212 CYS n 3 213 VAL n 3 214 ASN n 3 215 GLU n 3 216 ILE n 3 217 ASN n 3 218 SER n 3 219 ARG n 3 220 THR n 3 221 PRO n 3 222 MET n 3 223 ARG n 3 224 LEU n 3 225 SER n 3 226 TYR n 3 227 ILE n 3 228 GLU n 3 229 LYS n 3 230 LYS n 3 231 LYS n 3 232 GLY n 3 233 ARG n 3 234 GLN n 3 235 THR n 3 236 THR n 3 237 HIS n 3 238 ILE n 3 239 VAL n 3 240 PHE n 3 241 SER n 3 242 PHE n 3 243 ARG n 3 244 ASP n 3 245 ILE n 3 246 THR n 3 247 SER n 3 248 MET n 3 249 THR n 3 250 THR n 3 251 GLY n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'HIS-TAGGED PROTEIN' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DA 10 10 10 DA A A . n A 1 11 DA 11 11 11 DA A A . n A 1 12 DT 12 12 12 DT T A . n A 1 13 DT 13 13 13 DT T A . n A 1 14 DG 14 14 14 DG G A . n A 1 15 DC 15 15 15 DC C A . n A 1 16 DC 16 16 16 DC C A . n A 1 17 DC 17 17 17 DC C A . n A 1 18 DT 18 18 18 DT T A . n A 1 19 DC 19 19 19 DC C A . n A 1 20 DA 20 20 20 DA A A . n A 1 21 DG 21 21 21 DG G A . n A 1 22 DT 22 22 ? ? ? A . n B 2 1 DC 1 23 23 DC C B . n B 2 2 DT 2 24 24 DT T B . n B 2 3 DG 3 25 25 DG G B . n B 2 4 DA 4 26 26 DA A B . n B 2 5 DG 5 27 27 DG G B . n B 2 6 DG 6 28 28 DG G B . n B 2 7 DG 7 29 29 DG G B . n B 2 8 DC 8 30 30 DC C B . n B 2 9 DA 9 31 31 DA A B . n B 2 10 DA 10 32 32 DA A B . n B 2 11 DT 11 33 33 DT T B . n B 2 12 DT 12 34 34 DT T B . n B 2 13 DT 13 35 35 DT T B . n B 2 14 DG 14 36 36 DG G B . n B 2 15 DT 15 37 37 DT T B . n B 2 16 DC 16 38 38 DC C B . n B 2 17 DA 17 39 39 DA A B . n B 2 18 DC 18 40 40 DC C B . n B 2 19 DA 19 41 41 DA A B . n B 2 20 DG 20 42 42 DG G B . n B 2 21 DG 21 43 43 DG G B . n B 2 22 DT 22 44 ? ? ? B . n C 3 1 MET 1 1 ? ? ? C . n C 3 2 ALA 2 2 ? ? ? C . n C 3 3 GLU 3 3 ? ? ? C . n C 3 4 THR 4 4 ? ? ? C . n C 3 5 ALA 5 5 ? ? ? C . n C 3 6 VAL 6 6 ? ? ? C . n C 3 7 ILE 7 7 ? ? ? C . n C 3 8 ASN 8 8 ? ? ? C . n C 3 9 HIS 9 9 ? ? ? C . n C 3 10 LYS 10 10 ? ? ? C . n C 3 11 LYS 11 11 ? ? ? C . n C 3 12 ARG 12 12 ? ? ? C . n C 3 13 LYS 13 13 ? ? ? C . n C 3 14 ASN 14 14 ? ? ? C . n C 3 15 SER 15 15 15 SER SER C . n C 3 16 PRO 16 16 16 PRO PRO C . n C 3 17 ARG 17 17 17 ARG ARG C . n C 3 18 ILE 18 18 18 ILE ILE C . n C 3 19 VAL 19 19 19 VAL VAL C . n C 3 20 GLN 20 20 20 GLN GLN C . n C 3 21 SER 21 21 21 SER SER C . n C 3 22 ASN 22 22 22 ASN ASN C . n C 3 23 ASP 23 23 23 ASP ASP C . n C 3 24 LEU 24 24 24 LEU LEU C . n C 3 25 THR 25 25 25 THR THR C . n C 3 26 GLU 26 26 26 GLU GLU C . n C 3 27 ALA 27 27 27 ALA ALA C . n C 3 28 ALA 28 28 28 ALA ALA C . n C 3 29 TYR 29 29 29 TYR TYR C . n C 3 30 SER 30 30 30 SER SER C . n C 3 31 LEU 31 31 31 LEU LEU C . n C 3 32 SER 32 32 32 SER SER C . n C 3 33 ARG 33 33 33 ARG ARG C . n C 3 34 ASP 34 34 34 ASP ASP C . n C 3 35 GLN 35 35 35 GLN GLN C . n C 3 36 LYS 36 36 36 LYS LYS C . n C 3 37 ARG 37 37 37 ARG ARG C . n C 3 38 MET 38 38 38 MET MET C . n C 3 39 LEU 39 39 39 LEU LEU C . n C 3 40 TYR 40 40 40 TYR TYR C . n C 3 41 LEU 41 41 41 LEU LEU C . n C 3 42 PHE 42 42 42 PHE PHE C . n C 3 43 VAL 43 43 43 VAL VAL C . n C 3 44 ASP 44 44 44 ASP ASP C . n C 3 45 GLN 45 45 45 GLN GLN C . n C 3 46 ILE 46 46 46 ILE ILE C . n C 3 47 ARG 47 47 47 ARG ARG C . n C 3 48 LYS 48 48 48 LYS LYS C . n C 3 49 SER 49 49 49 SER SER C . n C 3 50 ASP 50 50 ? ? ? C . n C 3 51 GLY 51 51 ? ? ? C . n C 3 52 THR 52 52 ? ? ? C . n C 3 53 LEU 53 53 ? ? ? C . n C 3 54 GLN 54 54 ? ? ? C . n C 3 55 GLU 55 55 ? ? ? C . n C 3 56 HIS 56 56 56 HIS HIS C . n C 3 57 ASP 57 57 57 ASP ASP C . n C 3 58 GLY 58 58 58 GLY GLY C . n C 3 59 ILE 59 59 59 ILE ILE C . n C 3 60 CYS 60 60 60 CYS CYS C . n C 3 61 GLU 61 61 61 GLU GLU C . n C 3 62 ILE 62 62 62 ILE ILE C . n C 3 63 HIS 63 63 63 HIS HIS C . n C 3 64 VAL 64 64 64 VAL VAL C . n C 3 65 ALA 65 65 65 ALA ALA C . n C 3 66 LYS 66 66 66 LYS LYS C . n C 3 67 TYR 67 67 67 TYR TYR C . n C 3 68 ALA 68 68 68 ALA ALA C . n C 3 69 GLU 69 69 69 GLU GLU C . n C 3 70 ILE 70 70 70 ILE ILE C . n C 3 71 PHE 71 71 71 PHE PHE C . n C 3 72 GLY 72 72 72 GLY GLY C . n C 3 73 LEU 73 73 73 LEU LEU C . n C 3 74 THR 74 74 74 THR THR C . n C 3 75 SER 75 75 75 SER SER C . n C 3 76 ALA 76 76 76 ALA ALA C . n C 3 77 GLU 77 77 77 GLU GLU C . n C 3 78 ALA 78 78 78 ALA ALA C . n C 3 79 SER 79 79 79 SER SER C . n C 3 80 LYS 80 80 80 LYS LYS C . n C 3 81 ASP 81 81 81 ASP ASP C . n C 3 82 ILE 82 82 82 ILE ILE C . n C 3 83 ARG 83 83 83 ARG ARG C . n C 3 84 GLN 84 84 84 GLN GLN C . n C 3 85 ALA 85 85 85 ALA ALA C . n C 3 86 LEU 86 86 86 LEU LEU C . n C 3 87 LYS 87 87 87 LYS LYS C . n C 3 88 SER 88 88 88 SER SER C . n C 3 89 PHE 89 89 89 PHE PHE C . n C 3 90 ALA 90 90 90 ALA ALA C . n C 3 91 GLY 91 91 91 GLY GLY C . n C 3 92 LYS 92 92 92 LYS LYS C . n C 3 93 GLU 93 93 93 GLU GLU C . n C 3 94 VAL 94 94 94 VAL VAL C . n C 3 95 VAL 95 95 95 VAL VAL C . n C 3 96 PHE 96 96 96 PHE PHE C . n C 3 97 TYR 97 97 97 TYR TYR C . n C 3 98 ARG 98 98 ? ? ? C . n C 3 99 PRO 99 99 ? ? ? C . n C 3 100 GLU 100 100 ? ? ? C . n C 3 101 GLU 101 101 ? ? ? C . n C 3 102 ASP 102 102 ? ? ? C . n C 3 103 ALA 103 103 ? ? ? C . n C 3 104 GLY 104 104 ? ? ? C . n C 3 105 ASP 105 105 ? ? ? C . n C 3 106 GLU 106 106 ? ? ? C . n C 3 107 LYS 107 107 ? ? ? C . n C 3 108 GLY 108 108 ? ? ? C . n C 3 109 TYR 109 109 ? ? ? C . n C 3 110 GLU 110 110 110 GLU GLU C . n C 3 111 SER 111 111 111 SER SER C . n C 3 112 PHE 112 112 112 PHE PHE C . n C 3 113 PRO 113 113 113 PRO PRO C . n C 3 114 TRP 114 114 114 TRP TRP C . n C 3 115 PHE 115 115 115 PHE PHE C . n C 3 116 ILE 116 116 116 ILE ILE C . n C 3 117 LYS 117 117 117 LYS LYS C . n C 3 118 PRO 118 118 118 PRO PRO C . n C 3 119 ALA 119 119 119 ALA ALA C . n C 3 120 HIS 120 120 120 HIS HIS C . n C 3 121 SER 121 121 121 SER SER C . n C 3 122 PRO 122 122 122 PRO PRO C . n C 3 123 SER 123 123 123 SER SER C . n C 3 124 ARG 124 124 124 ARG ARG C . n C 3 125 GLY 125 125 125 GLY GLY C . n C 3 126 LEU 126 126 126 LEU LEU C . n C 3 127 TYR 127 127 127 TYR TYR C . n C 3 128 SER 128 128 128 SER SER C . n C 3 129 VAL 129 129 129 VAL VAL C . n C 3 130 HIS 130 130 130 HIS HIS C . n C 3 131 ILE 131 131 131 ILE ILE C . n C 3 132 ASN 132 132 132 ASN ASN C . n C 3 133 PRO 133 133 133 PRO PRO C . n C 3 134 TYR 134 134 134 TYR TYR C . n C 3 135 LEU 135 135 135 LEU LEU C . n C 3 136 ILE 136 136 136 ILE ILE C . n C 3 137 PRO 137 137 137 PRO PRO C . n C 3 138 PHE 138 138 138 PHE PHE C . n C 3 139 PHE 139 139 139 PHE PHE C . n C 3 140 ILE 140 140 140 ILE ILE C . n C 3 141 GLY 141 141 141 GLY GLY C . n C 3 142 LEU 142 142 142 LEU LEU C . n C 3 143 GLN 143 143 143 GLN GLN C . n C 3 144 ASN 144 144 144 ASN ASN C . n C 3 145 ARG 145 145 145 ARG ARG C . n C 3 146 PHE 146 146 146 PHE PHE C . n C 3 147 THR 147 147 147 THR THR C . n C 3 148 GLN 148 148 148 GLN GLN C . n C 3 149 PHE 149 149 149 PHE PHE C . n C 3 150 ARG 150 150 150 ARG ARG C . n C 3 151 LEU 151 151 151 LEU LEU C . n C 3 152 SER 152 152 152 SER SER C . n C 3 153 GLU 153 153 153 GLU GLU C . n C 3 154 THR 154 154 154 THR THR C . n C 3 155 LYS 155 155 155 LYS LYS C . n C 3 156 GLU 156 156 156 GLU GLU C . n C 3 157 ILE 157 157 157 ILE ILE C . n C 3 158 THR 158 158 158 THR THR C . n C 3 159 ASN 159 159 159 ASN ASN C . n C 3 160 PRO 160 160 160 PRO PRO C . n C 3 161 TYR 161 161 161 TYR TYR C . n C 3 162 ALA 162 162 162 ALA ALA C . n C 3 163 MET 163 163 163 MET MET C . n C 3 164 ARG 164 164 164 ARG ARG C . n C 3 165 LEU 165 165 165 LEU LEU C . n C 3 166 TYR 166 166 166 TYR TYR C . n C 3 167 GLU 167 167 167 GLU GLU C . n C 3 168 SER 168 168 168 SER SER C . n C 3 169 LEU 169 169 169 LEU LEU C . n C 3 170 CYS 170 170 170 CYS CYS C . n C 3 171 GLN 171 171 171 GLN GLN C . n C 3 172 TYR 172 172 172 TYR TYR C . n C 3 173 ARG 173 173 173 ARG ARG C . n C 3 174 LYS 174 174 174 LYS LYS C . n C 3 175 PRO 175 175 175 PRO PRO C . n C 3 176 ASP 176 176 176 ASP ASP C . n C 3 177 GLY 177 177 177 GLY GLY C . n C 3 178 SER 178 178 178 SER SER C . n C 3 179 GLY 179 179 179 GLY GLY C . n C 3 180 ILE 180 180 180 ILE ILE C . n C 3 181 VAL 181 181 181 VAL VAL C . n C 3 182 SER 182 182 182 SER SER C . n C 3 183 LEU 183 183 183 LEU LEU C . n C 3 184 LYS 184 184 184 LYS LYS C . n C 3 185 ILE 185 185 185 ILE ILE C . n C 3 186 ASP 186 186 186 ASP ASP C . n C 3 187 TRP 187 187 187 TRP TRP C . n C 3 188 ILE 188 188 188 ILE ILE C . n C 3 189 ILE 189 189 189 ILE ILE C . n C 3 190 GLU 190 190 190 GLU GLU C . n C 3 191 ARG 191 191 191 ARG ARG C . n C 3 192 TYR 192 192 192 TYR TYR C . n C 3 193 GLN 193 193 193 GLN GLN C . n C 3 194 LEU 194 194 194 LEU LEU C . n C 3 195 PRO 195 195 195 PRO PRO C . n C 3 196 GLN 196 196 196 GLN GLN C . n C 3 197 SER 197 197 197 SER SER C . n C 3 198 TYR 198 198 198 TYR TYR C . n C 3 199 GLN 199 199 199 GLN GLN C . n C 3 200 ARG 200 200 200 ARG ARG C . n C 3 201 MET 201 201 201 MET MET C . n C 3 202 PRO 202 202 202 PRO PRO C . n C 3 203 ASP 203 203 203 ASP ASP C . n C 3 204 PHE 204 204 204 PHE PHE C . n C 3 205 ARG 205 205 205 ARG ARG C . n C 3 206 ARG 206 206 206 ARG ARG C . n C 3 207 ARG 207 207 207 ARG ARG C . n C 3 208 PHE 208 208 208 PHE PHE C . n C 3 209 LEU 209 209 209 LEU LEU C . n C 3 210 GLN 210 210 210 GLN GLN C . n C 3 211 VAL 211 211 211 VAL VAL C . n C 3 212 CYS 212 212 212 CYS CYS C . n C 3 213 VAL 213 213 213 VAL VAL C . n C 3 214 ASN 214 214 214 ASN ASN C . n C 3 215 GLU 215 215 215 GLU GLU C . n C 3 216 ILE 216 216 216 ILE ILE C . n C 3 217 ASN 217 217 217 ASN ASN C . n C 3 218 SER 218 218 218 SER SER C . n C 3 219 ARG 219 219 219 ARG ARG C . n C 3 220 THR 220 220 220 THR THR C . n C 3 221 PRO 221 221 221 PRO PRO C . n C 3 222 MET 222 222 222 MET MET C . n C 3 223 ARG 223 223 223 ARG ARG C . n C 3 224 LEU 224 224 224 LEU LEU C . n C 3 225 SER 225 225 225 SER SER C . n C 3 226 TYR 226 226 226 TYR TYR C . n C 3 227 ILE 227 227 227 ILE ILE C . n C 3 228 GLU 228 228 228 GLU GLU C . n C 3 229 LYS 229 229 229 LYS LYS C . n C 3 230 LYS 230 230 230 LYS LYS C . n C 3 231 LYS 231 231 231 LYS LYS C . n C 3 232 GLY 232 232 232 GLY GLY C . n C 3 233 ARG 233 233 233 ARG ARG C . n C 3 234 GLN 234 234 234 GLN GLN C . n C 3 235 THR 235 235 235 THR THR C . n C 3 236 THR 236 236 236 THR THR C . n C 3 237 HIS 237 237 237 HIS HIS C . n C 3 238 ILE 238 238 238 ILE ILE C . n C 3 239 VAL 239 239 239 VAL VAL C . n C 3 240 PHE 240 240 240 PHE PHE C . n C 3 241 SER 241 241 241 SER SER C . n C 3 242 PHE 242 242 242 PHE PHE C . n C 3 243 ARG 243 243 243 ARG ARG C . n C 3 244 ASP 244 244 244 ASP ASP C . n C 3 245 ILE 245 245 245 ILE ILE C . n C 3 246 THR 246 246 246 THR THR C . n C 3 247 SER 247 247 ? ? ? C . n C 3 248 MET 248 248 ? ? ? C . n C 3 249 THR 249 249 ? ? ? C . n C 3 250 THR 250 250 ? ? ? C . n C 3 251 GLY 251 251 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 252 1 MG MG C . E 5 HOH 1 23 3 HOH HOH A . E 5 HOH 2 24 14 HOH HOH A . F 5 HOH 1 11 11 HOH HOH B . F 5 HOH 2 12 12 HOH HOH B . G 5 HOH 1 253 2 HOH HOH C . G 5 HOH 2 254 4 HOH HOH C . G 5 HOH 3 255 5 HOH HOH C . G 5 HOH 4 256 6 HOH HOH C . G 5 HOH 5 257 7 HOH HOH C . G 5 HOH 6 258 8 HOH HOH C . G 5 HOH 7 259 9 HOH HOH C . G 5 HOH 8 260 10 HOH HOH C . G 5 HOH 9 261 13 HOH HOH C . G 5 HOH 10 262 15 HOH HOH C . G 5 HOH 11 263 16 HOH HOH C . G 5 HOH 12 264 17 HOH HOH C . G 5 HOH 13 265 18 HOH HOH C . G 5 HOH 14 266 19 HOH HOH C . G 5 HOH 15 267 20 HOH HOH C . G 5 HOH 16 268 21 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CCP4 'model building' . ? 1 X-PLOR refinement 3.851 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CCP4 phasing . ? 5 # _cell.entry_id 1REP _cell.length_a 108.435 _cell.length_b 81.853 _cell.length_c 73.891 _cell.angle_alpha 90.00 _cell.angle_beta 121.53 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1REP _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 # _exptl.entry_id 1REP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_percent_sol 60 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '12 % PEG 400, 200 MM MGCL2, 100 MM TRIS-HCL, PH8.0, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 MGCL2 ? ? ? 1 3 1 TRIS-HCL ? ? ? 1 4 2 'PEG 400' ? ? ? 1 5 2 MGCL2 ? ? ? 1 6 2 TRIS-HCL ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-18B _diffrn_source.pdbx_wavelength 1.0000 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1REP _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35 _reflns.d_resolution_high 2.6 _reflns.number_obs 15208 _reflns.number_all ? _reflns.percent_possible_obs 88.7 _reflns.pdbx_Rmerge_I_obs 0.0350000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 34.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_min ? _reflns.observed_criterion_F_max ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.64 _reflns_shell.percent_possible_all 65 _reflns_shell.Rmerge_I_obs 0.2980000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1REP _refine.ls_number_reflns_obs 13738 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs 87.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2130000 _refine.ls_R_factor_R_free 0.2740000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 696 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 30.9 _refine.aniso_B[1][1] -26.4 _refine.aniso_B[2][2] -32.6 _refine.aniso_B[3][3] -45.8 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -31.4 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1780 _refine_hist.pdbx_number_atoms_nucleic_acid 855 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 2656 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.181 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.96 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 2 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1REP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1REP _struct.title 'CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1REP _struct_keywords.pdbx_keywords REPLICATION/DNA _struct_keywords.text 'REPLICATION INITIATOR, DNA-BINDING, REPLICATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP REPE1_ECOLI 3 P03856 ? ? ? 2 PDB 1REP 1 1REP ? ? ? 3 PDB 1REP 2 1REP ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1REP C 1 ? 251 ? P03856 1 ? 251 ? 1 251 2 2 1REP A 1 ? 22 ? 1REP 1 ? 22 ? 1 22 3 3 1REP B 1 ? 22 ? 1REP 23 ? 44 ? 23 44 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1REP _struct_ref_seq_dif.mon_id PRO _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 118 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P03856 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 118 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 118 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A1N ASN C 22 ? GLU C 26 ? ASN C 22 GLU C 26 1 ? 5 HELX_P HELX_P2 A2N ARG C 33 ? ARG C 47 ? ARG C 33 ARG C 47 1 ? 15 HELX_P HELX_P3 A3N VAL C 64 ? ILE C 70 ? VAL C 64 ILE C 70 1 ? 7 HELX_P HELX_P4 A4N SER C 75 ? LYS C 87 ? SER C 75 LYS C 87 1 ? 13 HELX_P HELX_P5 A5N PRO C 133 ? PHE C 139 ? PRO C 133 PHE C 139 1 ? 7 HELX_P HELX_P6 A1C LEU C 151 ? THR C 154 ? LEU C 151 THR C 154 1 ? 4 HELX_P HELX_P7 A2C PRO C 160 ? CYS C 170 ? PRO C 160 CYS C 170 1 ? 11 HELX_P HELX_P8 A3C ILE C 185 ? ARG C 191 ? ILE C 185 ARG C 191 1 ? 7 HELX_P HELX_P9 A4C ARG C 200 ? ARG C 219 ? ARG C 200 ARG C 219 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E HOH . O ? ? ? 1_555 D MG . MG ? ? A HOH 23 C MG 252 1_555 ? ? ? ? ? ? ? 1.945 ? ? metalc2 metalc ? ? C GLU 77 OE1 ? ? ? 1_555 D MG . MG ? ? C GLU 77 C MG 252 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc3 metalc ? ? C ASP 81 OD1 ? ? ? 1_555 D MG . MG ? ? C ASP 81 C MG 252 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? C MG 252 C HOH 253 1_555 ? ? ? ? ? ? ? 1.938 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? C MG 252 C HOH 254 1_555 ? ? ? ? ? ? ? 1.909 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? C MG 252 C HOH 255 1_555 ? ? ? ? ? ? ? 1.991 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 21 N1 ? ? A DC 1 B DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 21 O6 ? ? A DC 1 B DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 21 N2 ? ? A DC 1 B DG 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 20 N1 ? ? A DC 2 B DG 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 20 O6 ? ? A DC 2 B DG 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 20 N2 ? ? A DC 2 B DG 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 19 N1 ? ? A DT 3 B DA 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 19 N6 ? ? A DT 3 B DA 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 18 N3 ? ? A DG 4 B DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 18 O2 ? ? A DG 4 B DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 18 N4 ? ? A DG 4 B DC 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 17 N1 ? ? A DT 5 B DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 17 N6 ? ? A DT 5 B DA 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 16 N3 ? ? A DG 6 B DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 16 O2 ? ? A DG 6 B DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 16 N4 ? ? A DG 6 B DC 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 7 B DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 7 B DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 14 N1 ? ? A DC 8 B DG 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 14 O6 ? ? A DC 8 B DG 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 14 N2 ? ? A DC 8 B DG 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 13 N3 ? ? A DA 9 B DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 13 O4 ? ? A DA 9 B DT 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 10 B DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 12 O4 ? ? A DA 10 B DT 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 11 N3 ? ? A DA 11 B DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 11 O4 ? ? A DA 11 B DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 12 B DA 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 12 B DA 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 13 B DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 13 B DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 14 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 14 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 14 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 15 B DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 15 B DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 15 B DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 16 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 16 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 16 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 17 B DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 17 B DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 17 B DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 18 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 18 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DC 19 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 19 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DC 19 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 19 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DC 19 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 19 B DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 2 N3 ? ? A DA 20 B DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 2 O4 ? ? A DA 20 B DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DG 21 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 21 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DG 21 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 21 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DG 21 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 21 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 23 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 OE1 ? C GLU 77 ? C GLU 77 ? 1_555 91.7 ? 2 O ? E HOH . ? A HOH 23 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 OD1 ? C ASP 81 ? C ASP 81 ? 1_555 178.8 ? 3 OE1 ? C GLU 77 ? C GLU 77 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 OD1 ? C ASP 81 ? C ASP 81 ? 1_555 87.2 ? 4 O ? E HOH . ? A HOH 23 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 253 ? 1_555 97.1 ? 5 OE1 ? C GLU 77 ? C GLU 77 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 253 ? 1_555 170.6 ? 6 OD1 ? C ASP 81 ? C ASP 81 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 253 ? 1_555 84.0 ? 7 O ? E HOH . ? A HOH 23 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 254 ? 1_555 87.5 ? 8 OE1 ? C GLU 77 ? C GLU 77 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 254 ? 1_555 86.1 ? 9 OD1 ? C ASP 81 ? C ASP 81 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 254 ? 1_555 91.8 ? 10 O ? G HOH . ? C HOH 253 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 254 ? 1_555 97.6 ? 11 O ? E HOH . ? A HOH 23 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 255 ? 1_555 91.0 ? 12 OE1 ? C GLU 77 ? C GLU 77 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 255 ? 1_555 87.8 ? 13 OD1 ? C ASP 81 ? C ASP 81 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 255 ? 1_555 89.6 ? 14 O ? G HOH . ? C HOH 253 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 255 ? 1_555 88.6 ? 15 O ? G HOH . ? C HOH 254 ? 1_555 MG ? D MG . ? C MG 252 ? 1_555 O ? G HOH . ? C HOH 255 ? 1_555 173.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details B1N ? 1 ? B1C ? 1 ? B2A ? 1 ? B2B ? 1 ? B2N ? 1 ? B4N ? 1 ? B3N ? 1 ? B2C ? 1 ? B4C ? 1 ? B3C ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id B1N 1 ARG C 17 ? GLN C 20 ? ARG C 17 GLN C 20 B1C 1 THR C 147 ? ARG C 150 ? THR C 147 ARG C 150 B2A 1 GLU C 93 ? VAL C 95 ? GLU C 93 VAL C 95 B2B 1 SER C 111 ? PRO C 113 ? SER C 111 PRO C 113 B2N 1 ILE C 59 ? HIS C 63 ? ILE C 59 HIS C 63 B4N 1 LEU C 126 ? HIS C 130 ? LEU C 126 HIS C 130 B3N 1 HIS C 120 ? SER C 123 ? HIS C 120 SER C 123 B2C 1 SER C 178 ? LYS C 184 ? SER C 178 LYS C 184 B4C 1 THR C 235 ? ASP C 244 ? THR C 235 ASP C 244 B3C 1 MET C 222 ? LYS C 230 ? MET C 222 LYS C 230 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 252 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE MG C 252' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH E . ? HOH A 23 . ? 1_555 ? 2 AC1 6 GLU C 77 ? GLU C 77 . ? 1_555 ? 3 AC1 6 ASP C 81 ? ASP C 81 . ? 1_555 ? 4 AC1 6 HOH G . ? HOH C 253 . ? 1_555 ? 5 AC1 6 HOH G . ? HOH C 254 . ? 1_555 ? 6 AC1 6 HOH G . ? HOH C 255 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.10 108.30 1.80 0.30 N 2 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 111.81 108.30 3.51 0.30 N 3 1 "O4'" B DG 25 ? ? "C1'" B DG 25 ? ? N9 B DG 25 ? ? 110.84 108.30 2.54 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP C 44 ? ? -41.75 -73.37 2 1 ILE C 59 ? ? -64.28 79.02 3 1 SER C 88 ? ? -65.76 8.28 4 1 HIS C 130 ? ? -103.81 79.57 5 1 LEU C 142 ? ? 68.57 -12.67 6 1 PHE C 208 ? ? -105.00 -66.04 7 1 ASN C 217 ? ? -70.95 20.05 8 1 SER C 218 ? ? -147.04 -25.40 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 1 ? ? 0.060 'SIDE CHAIN' 2 1 DC A 2 ? ? 0.059 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A DT 22 ? A DT 22 2 1 Y 1 B DT 44 ? B DT 22 3 1 Y 1 C MET 1 ? C MET 1 4 1 Y 1 C ALA 2 ? C ALA 2 5 1 Y 1 C GLU 3 ? C GLU 3 6 1 Y 1 C THR 4 ? C THR 4 7 1 Y 1 C ALA 5 ? C ALA 5 8 1 Y 1 C VAL 6 ? C VAL 6 9 1 Y 1 C ILE 7 ? C ILE 7 10 1 Y 1 C ASN 8 ? C ASN 8 11 1 Y 1 C HIS 9 ? C HIS 9 12 1 Y 1 C LYS 10 ? C LYS 10 13 1 Y 1 C LYS 11 ? C LYS 11 14 1 Y 1 C ARG 12 ? C ARG 12 15 1 Y 1 C LYS 13 ? C LYS 13 16 1 Y 1 C ASN 14 ? C ASN 14 17 1 Y 1 C ASP 50 ? C ASP 50 18 1 Y 1 C GLY 51 ? C GLY 51 19 1 Y 1 C THR 52 ? C THR 52 20 1 Y 1 C LEU 53 ? C LEU 53 21 1 Y 1 C GLN 54 ? C GLN 54 22 1 Y 1 C GLU 55 ? C GLU 55 23 1 Y 1 C ARG 98 ? C ARG 98 24 1 Y 1 C PRO 99 ? C PRO 99 25 1 Y 1 C GLU 100 ? C GLU 100 26 1 Y 1 C GLU 101 ? C GLU 101 27 1 Y 1 C ASP 102 ? C ASP 102 28 1 Y 1 C ALA 103 ? C ALA 103 29 1 Y 1 C GLY 104 ? C GLY 104 30 1 Y 1 C ASP 105 ? C ASP 105 31 1 Y 1 C GLU 106 ? C GLU 106 32 1 Y 1 C LYS 107 ? C LYS 107 33 1 Y 1 C GLY 108 ? C GLY 108 34 1 Y 1 C TYR 109 ? C TYR 109 35 1 Y 1 C SER 247 ? C SER 247 36 1 Y 1 C MET 248 ? C MET 248 37 1 Y 1 C THR 249 ? C THR 249 38 1 Y 1 C THR 250 ? C THR 250 39 1 Y 1 C GLY 251 ? C GLY 251 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1REP 'double helix' 1REP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 21 1_555 0.127 -0.245 -0.346 8.641 -6.488 -1.704 1 A_DC1:DG43_B A 1 ? B 43 ? 19 1 1 A DC 2 1_555 B DG 20 1_555 0.119 -0.295 -0.731 2.557 -2.769 -0.641 2 A_DC2:DG42_B A 2 ? B 42 ? 19 1 1 A DT 3 1_555 B DA 19 1_555 0.083 -0.210 0.202 -11.144 0.135 2.567 3 A_DT3:DA41_B A 3 ? B 41 ? 20 1 1 A DG 4 1_555 B DC 18 1_555 -0.041 -0.108 0.263 -1.404 -1.313 -2.304 4 A_DG4:DC40_B A 4 ? B 40 ? 19 1 1 A DT 5 1_555 B DA 17 1_555 -0.040 -0.047 0.074 6.769 -8.289 -4.905 5 A_DT5:DA39_B A 5 ? B 39 ? 20 1 1 A DG 6 1_555 B DC 16 1_555 -0.262 -0.111 -0.010 -1.059 -2.155 0.004 6 A_DG6:DC38_B A 6 ? B 38 ? 19 1 1 A DA 7 1_555 B DT 15 1_555 -0.017 -0.204 -0.183 5.880 -6.495 5.414 7 A_DA7:DT37_B A 7 ? B 37 ? 20 1 1 A DC 8 1_555 B DG 14 1_555 0.082 -0.077 -0.552 15.765 -5.930 0.011 8 A_DC8:DG36_B A 8 ? B 36 ? 19 1 1 A DA 9 1_555 B DT 13 1_555 0.016 -0.058 -0.138 9.656 -13.420 -1.102 9 A_DA9:DT35_B A 9 ? B 35 ? 20 1 1 A DA 10 1_555 B DT 12 1_555 0.003 -0.189 -0.161 2.976 -18.131 1.110 10 A_DA10:DT34_B A 10 ? B 34 ? 20 1 1 A DA 11 1_555 B DT 11 1_555 0.058 -0.278 0.025 -2.812 -15.356 3.327 11 A_DA11:DT33_B A 11 ? B 33 ? 20 1 1 A DT 12 1_555 B DA 10 1_555 -0.014 -0.124 -0.006 -0.915 -10.753 0.987 12 A_DT12:DA32_B A 12 ? B 32 ? 20 1 1 A DT 13 1_555 B DA 9 1_555 -0.019 -0.221 -0.205 0.847 -10.121 1.598 13 A_DT13:DA31_B A 13 ? B 31 ? 20 1 1 A DG 14 1_555 B DC 8 1_555 -0.047 -0.103 -0.200 6.566 -0.142 -1.399 14 A_DG14:DC30_B A 14 ? B 30 ? 19 1 1 A DC 15 1_555 B DG 7 1_555 0.175 -0.228 -0.635 18.551 -4.462 0.090 15 A_DC15:DG29_B A 15 ? B 29 ? 19 1 1 A DC 16 1_555 B DG 6 1_555 0.107 -0.224 -0.212 5.224 4.342 -2.014 16 A_DC16:DG28_B A 16 ? B 28 ? 19 1 1 A DC 17 1_555 B DG 5 1_555 0.106 -0.188 -0.031 3.284 1.161 -1.345 17 A_DC17:DG27_B A 17 ? B 27 ? 19 1 1 A DT 18 1_555 B DA 4 1_555 -0.084 -0.191 0.061 -1.637 -5.162 -0.322 18 A_DT18:DA26_B A 18 ? B 26 ? 20 1 1 A DC 19 1_555 B DG 3 1_555 0.084 -0.071 0.043 -1.537 -3.102 1.081 19 A_DC19:DG25_B A 19 ? B 25 ? 19 1 1 A DA 20 1_555 B DT 2 1_555 0.081 -0.147 0.332 5.295 -4.742 -0.271 20 A_DA20:DT24_B A 20 ? B 24 ? 20 1 1 A DG 21 1_555 B DC 1 1_555 0.025 -0.213 -0.017 5.213 -8.291 -3.575 21 A_DG21:DC23_B A 21 ? B 23 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 21 1_555 A DC 2 1_555 B DG 20 1_555 0.926 -0.687 3.435 8.288 9.032 33.869 -2.477 -0.248 3.281 14.911 -13.683 35.958 1 AA_DC1DC2:DG42DG43_BB A 1 ? B 43 ? A 2 ? B 42 ? 1 A DC 2 1_555 B DG 20 1_555 A DT 3 1_555 B DA 19 1_555 0.054 -1.091 3.738 -1.066 12.281 33.901 -3.666 -0.252 3.163 20.249 1.757 36.011 2 AA_DC2DT3:DA41DG42_BB A 2 ? B 42 ? A 3 ? B 41 ? 1 A DT 3 1_555 B DA 19 1_555 A DG 4 1_555 B DC 18 1_555 0.032 0.031 3.168 -0.557 10.886 33.878 -1.494 -0.131 3.033 18.108 0.927 35.539 3 AA_DT3DG4:DC40DA41_BB A 3 ? B 41 ? A 4 ? B 40 ? 1 A DG 4 1_555 B DC 18 1_555 A DT 5 1_555 B DA 17 1_555 -0.413 -0.901 3.232 2.109 0.449 28.968 -1.893 1.278 3.181 0.895 -4.208 29.047 4 AA_DG4DT5:DA39DC40_BB A 4 ? B 40 ? A 5 ? B 39 ? 1 A DT 5 1_555 B DA 17 1_555 A DG 6 1_555 B DC 16 1_555 0.015 0.581 3.443 -0.534 3.542 39.098 0.416 -0.090 3.480 5.279 0.796 39.256 5 AA_DT5DG6:DC38DA39_BB A 5 ? B 39 ? A 6 ? B 38 ? 1 A DG 6 1_555 B DC 16 1_555 A DA 7 1_555 B DT 15 1_555 -0.440 -0.335 3.248 -0.550 8.100 29.715 -2.185 0.724 3.060 15.435 1.049 30.780 6 AA_DG6DA7:DT37DC38_BB A 6 ? B 38 ? A 7 ? B 37 ? 1 A DA 7 1_555 B DT 15 1_555 A DC 8 1_555 B DG 14 1_555 -0.281 -0.613 3.099 -0.966 5.175 30.673 -2.066 0.351 2.965 9.693 1.810 31.111 7 AA_DA7DC8:DG36DT37_BB A 7 ? B 37 ? A 8 ? B 36 ? 1 A DC 8 1_555 B DG 14 1_555 A DA 9 1_555 B DT 13 1_555 -0.084 0.245 3.583 -2.482 6.891 35.339 -0.682 -0.253 3.564 11.203 4.035 36.066 8 AA_DC8DA9:DT35DG36_BB A 8 ? B 36 ? A 9 ? B 35 ? 1 A DA 9 1_555 B DT 13 1_555 A DA 10 1_555 B DT 12 1_555 -0.205 0.489 3.510 0.036 -3.233 39.478 1.125 0.307 3.460 -4.777 -0.053 39.605 9 AA_DA9DA10:DT34DT35_BB A 9 ? B 35 ? A 10 ? B 34 ? 1 A DA 10 1_555 B DT 12 1_555 A DA 11 1_555 B DT 11 1_555 0.126 -0.599 3.336 -1.088 1.247 37.690 -1.090 -0.338 3.311 1.929 1.683 37.725 10 AA_DA10DA11:DT33DT34_BB A 10 ? B 34 ? A 11 ? B 33 ? 1 A DA 11 1_555 B DT 11 1_555 A DT 12 1_555 B DA 10 1_555 -0.053 -0.497 3.268 0.564 -3.689 35.068 -0.270 0.172 3.301 -6.101 -0.933 35.259 11 AA_DA11DT12:DA32DT33_BB A 11 ? B 33 ? A 12 ? B 32 ? 1 A DT 12 1_555 B DA 10 1_555 A DT 13 1_555 B DA 9 1_555 0.402 0.295 3.190 2.275 3.230 37.265 0.044 -0.332 3.221 5.038 -3.548 37.466 12 AA_DT12DT13:DA31DA32_BB A 12 ? B 32 ? A 13 ? B 31 ? 1 A DT 13 1_555 B DA 9 1_555 A DG 14 1_555 B DC 8 1_555 0.166 1.443 3.309 -0.081 4.824 34.289 1.652 -0.293 3.473 8.132 0.136 34.617 13 AA_DT13DG14:DC30DA31_BB A 13 ? B 31 ? A 14 ? B 30 ? 1 A DG 14 1_555 B DC 8 1_555 A DC 15 1_555 B DG 7 1_555 0.394 -0.764 3.143 4.553 0.870 32.050 -1.519 0.070 3.146 1.566 -8.193 32.375 14 AA_DG14DC15:DG29DC30_BB A 14 ? B 30 ? A 15 ? B 29 ? 1 A DC 15 1_555 B DG 7 1_555 A DC 16 1_555 B DG 6 1_555 -0.457 -1.300 3.716 -4.945 11.941 29.770 -4.595 -0.118 3.022 21.984 9.104 32.396 15 AA_DC15DC16:DG28DG29_BB A 15 ? B 29 ? A 16 ? B 28 ? 1 A DC 16 1_555 B DG 6 1_555 A DC 17 1_555 B DG 5 1_555 -0.007 -0.930 3.488 -2.204 4.785 32.969 -2.451 -0.370 3.318 8.364 3.852 33.376 16 AA_DC16DC17:DG27DG28_BB A 16 ? B 28 ? A 17 ? B 27 ? 1 A DC 17 1_555 B DG 5 1_555 A DT 18 1_555 B DA 4 1_555 -0.201 -1.486 3.483 1.651 6.232 29.254 -4.186 0.735 3.092 12.153 -3.221 29.941 17 AA_DC17DT18:DA26DG27_BB A 17 ? B 27 ? A 18 ? B 26 ? 1 A DT 18 1_555 B DA 4 1_555 A DC 19 1_555 B DG 3 1_555 0.720 0.094 3.335 3.187 4.512 36.715 -0.475 -0.692 3.371 7.113 -5.025 37.114 18 AA_DT18DC19:DG25DA26_BB A 18 ? B 26 ? A 19 ? B 25 ? 1 A DC 19 1_555 B DG 3 1_555 A DA 20 1_555 B DT 2 1_555 -0.920 0.595 3.170 -4.902 4.054 34.205 0.377 0.792 3.313 6.819 8.246 34.774 19 AA_DC19DA20:DT24DG25_BB A 19 ? B 25 ? A 20 ? B 24 ? 1 A DA 20 1_555 B DT 2 1_555 A DG 21 1_555 B DC 1 1_555 -0.089 -0.271 3.422 0.661 8.301 36.500 -1.556 0.229 3.282 13.045 -1.038 37.407 20 AA_DA20DG21:DC23DT24_BB A 20 ? B 24 ? A 21 ? B 23 ? # _atom_sites.entry_id 1REP _atom_sites.fract_transf_matrix[1][1] 0.009222 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005657 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012217 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015877 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_