data_1RF3 # _entry.id 1RF3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RF3 pdb_00001rf3 10.2210/pdb1rf3/pdb RCSB RCSB020690 ? ? WWPDB D_1000020690 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RF3 _pdbx_database_status.recvd_initial_deposition_date 2003-11-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, C.' 1 'Norris, P.S.' 2 'Ni, C.Z.' 3 'Havert, M.L.' 4 'Chiong, E.M.' 5 'Tran, B.R.' 6 'Cabezas, E.' 7 'Cheng, G.' 8 'Reed, J.C.' 9 'Satterthwait, A.C.' 10 'Ware, C.F.' 11 'Ely, K.R.' 12 # _citation.id primary _citation.title ;Structurally distinct recognition motifs in lymphotoxin-beta receptor and CD40 for tumor necrosis factor receptor-associated factor (TRAF)-mediated signaling. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 50523 _citation.page_last 50529 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14517219 _citation.pdbx_database_id_DOI 10.1074/jbc.M309381200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, C.' 1 ? primary 'Norris, P.S.' 2 ? primary 'Ni, C.Z.' 3 ? primary 'Havert, M.L.' 4 ? primary 'Chiong, E.M.' 5 ? primary 'Tran, B.R.' 6 ? primary 'Cabezas, E.' 7 ? primary 'Reed, J.C.' 8 ? primary 'Satterthwait, A.C.' 9 ? primary 'Ware, C.F.' 10 ? primary 'Ely, K.R.' 11 ? # _cell.entry_id 1RF3 _cell.length_a 83.700 _cell.length_b 83.700 _cell.length_c 79.100 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RF3 _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TNF receptor associated factor 3' 22904.287 1 ? ? 'Recognition motif (residues 377-568)' ? 2 polymer syn '24-residue peptide from Lymphotoxin-B Receptor' 2516.669 1 ? ? 'Recognition motif (residues 385-408)' ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CD40 receptor associated factor 1, CRAF1, CD40 binding protein, CD40BP, LMP1 associated protein, LAP1, CAP-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCA RVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPV FVAQTVLENGTYIKDDTIFIKVIVDTSDLPDPLEHHHHHH ; ;NTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCA RVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPV FVAQTVLENGTYIKDDTIFIKVIVDTSDLPDPLEHHHHHH ; A ? 2 'polypeptide(L)' no no PYPIPEEGDPGPPGLSTPHQEDGK PYPIPEEGDPGPPGLSTPHQEDGK B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 THR n 1 3 GLY n 1 4 LEU n 1 5 LEU n 1 6 GLU n 1 7 SER n 1 8 GLN n 1 9 LEU n 1 10 SER n 1 11 ARG n 1 12 HIS n 1 13 ASP n 1 14 GLN n 1 15 MET n 1 16 LEU n 1 17 SER n 1 18 VAL n 1 19 HIS n 1 20 ASP n 1 21 ILE n 1 22 ARG n 1 23 LEU n 1 24 ALA n 1 25 ASP n 1 26 MET n 1 27 ASP n 1 28 LEU n 1 29 ARG n 1 30 PHE n 1 31 GLN n 1 32 VAL n 1 33 LEU n 1 34 GLU n 1 35 THR n 1 36 ALA n 1 37 SER n 1 38 TYR n 1 39 ASN n 1 40 GLY n 1 41 VAL n 1 42 LEU n 1 43 ILE n 1 44 TRP n 1 45 LYS n 1 46 ILE n 1 47 ARG n 1 48 ASP n 1 49 TYR n 1 50 LYS n 1 51 ARG n 1 52 ARG n 1 53 LYS n 1 54 GLN n 1 55 GLU n 1 56 ALA n 1 57 VAL n 1 58 MET n 1 59 GLY n 1 60 LYS n 1 61 THR n 1 62 LEU n 1 63 SER n 1 64 LEU n 1 65 TYR n 1 66 SER n 1 67 GLN n 1 68 PRO n 1 69 PHE n 1 70 TYR n 1 71 THR n 1 72 GLY n 1 73 TYR n 1 74 PHE n 1 75 GLY n 1 76 TYR n 1 77 LYS n 1 78 MET n 1 79 CYS n 1 80 ALA n 1 81 ARG n 1 82 VAL n 1 83 TYR n 1 84 LEU n 1 85 ASN n 1 86 GLY n 1 87 ASP n 1 88 GLY n 1 89 MET n 1 90 GLY n 1 91 LYS n 1 92 GLY n 1 93 THR n 1 94 HIS n 1 95 LEU n 1 96 SER n 1 97 LEU n 1 98 PHE n 1 99 PHE n 1 100 VAL n 1 101 ILE n 1 102 MET n 1 103 ARG n 1 104 GLY n 1 105 GLU n 1 106 TYR n 1 107 ASP n 1 108 ALA n 1 109 LEU n 1 110 LEU n 1 111 PRO n 1 112 TRP n 1 113 PRO n 1 114 PHE n 1 115 LYS n 1 116 GLN n 1 117 LYS n 1 118 VAL n 1 119 THR n 1 120 LEU n 1 121 MET n 1 122 LEU n 1 123 MET n 1 124 ASP n 1 125 GLN n 1 126 GLY n 1 127 SER n 1 128 SER n 1 129 ARG n 1 130 ARG n 1 131 HIS n 1 132 LEU n 1 133 GLY n 1 134 ASP n 1 135 ALA n 1 136 PHE n 1 137 LYS n 1 138 PRO n 1 139 ASP n 1 140 PRO n 1 141 ASN n 1 142 SER n 1 143 SER n 1 144 SER n 1 145 PHE n 1 146 LYS n 1 147 LYS n 1 148 PRO n 1 149 THR n 1 150 GLY n 1 151 GLU n 1 152 MET n 1 153 ASN n 1 154 ILE n 1 155 ALA n 1 156 SER n 1 157 GLY n 1 158 CYS n 1 159 PRO n 1 160 VAL n 1 161 PHE n 1 162 VAL n 1 163 ALA n 1 164 GLN n 1 165 THR n 1 166 VAL n 1 167 LEU n 1 168 GLU n 1 169 ASN n 1 170 GLY n 1 171 THR n 1 172 TYR n 1 173 ILE n 1 174 LYS n 1 175 ASP n 1 176 ASP n 1 177 THR n 1 178 ILE n 1 179 PHE n 1 180 ILE n 1 181 LYS n 1 182 VAL n 1 183 ILE n 1 184 VAL n 1 185 ASP n 1 186 THR n 1 187 SER n 1 188 ASP n 1 189 LEU n 1 190 PRO n 1 191 ASP n 1 192 PRO n 1 193 LEU n 1 194 GLU n 1 195 HIS n 1 196 HIS n 1 197 HIS n 1 198 HIS n 1 199 HIS n 1 200 HIS n 2 1 PRO n 2 2 TYR n 2 3 PRO n 2 4 ILE n 2 5 PRO n 2 6 GLU n 2 7 GLU n 2 8 GLY n 2 9 ASP n 2 10 PRO n 2 11 GLY n 2 12 PRO n 2 13 PRO n 2 14 GLY n 2 15 LEU n 2 16 SER n 2 17 THR n 2 18 PRO n 2 19 HIS n 2 20 GLN n 2 21 GLU n 2 22 ASP n 2 23 GLY n 2 24 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'TRAF3 OR CRAF1 OR CAP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The peptide was chemically synthesized, the sequence of the peptide occurs naturally in humans (Homo sapiens)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TRAF3_HUMAN Q13114 1 ;NTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCA RVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPV FVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP ; 377 ? 2 UNP TNR3_HUMAN P36941 2 PYPIPEEGDPGPPGLSTPHQEDGK 385 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RF3 A 1 ? 192 ? Q13114 377 ? 568 ? 313 504 2 2 1RF3 B 1 ? 24 ? P36941 385 ? 408 ? 385 408 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1RF3 LEU A 193 ? UNP Q13114 ? ? 'expression tag' 505 1 1 1RF3 GLU A 194 ? UNP Q13114 ? ? 'expression tag' 506 2 1 1RF3 HIS A 195 ? UNP Q13114 ? ? 'expression tag' 507 3 1 1RF3 HIS A 196 ? UNP Q13114 ? ? 'expression tag' 508 4 1 1RF3 HIS A 197 ? UNP Q13114 ? ? 'expression tag' 509 5 1 1RF3 HIS A 198 ? UNP Q13114 ? ? 'expression tag' 510 6 1 1RF3 HIS A 199 ? UNP Q13114 ? ? 'expression tag' 511 7 1 1RF3 HIS A 200 ? UNP Q13114 ? ? 'expression tag' 512 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RF3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 60.88 _exptl_crystal.description ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '15% PEG4000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 98 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-10-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 1RF3 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 3.5 _reflns.d_resolution_low 50 _reflns.number_all 4026 _reflns.number_obs 3177 _reflns.percent_possible_obs 95.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.12 _reflns.pdbx_netI_over_sigmaI 8.0 _reflns.B_iso_Wilson_estimate 15.1 _reflns.pdbx_redundancy 4.43 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.50 _reflns_shell.d_res_low 3.63 _reflns_shell.percent_possible_all 95.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.38 _reflns_shell.meanI_over_sigI_obs 8.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 390 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RF3 _refine.ls_d_res_high 3.5 _refine.ls_d_res_low 8.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 3701 _refine.ls_number_reflns_obs 3177 _refine.ls_number_reflns_R_free 163 _refine.ls_percent_reflns_obs 83 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.266 _refine.ls_R_factor_R_free 0.315 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model 'PDB ENTRY 1L0A' _refine.pdbx_ls_cross_valid_method Througout _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model 'Engh & Huber' _refine.B_iso_mean 25.3 _refine.aniso_B[1][1] 13.65 _refine.aniso_B[1][2] 13.65 _refine.aniso_B[1][3] -27.31 _refine.aniso_B[2][2] -2.69 _refine.aniso_B[2][3] 0.0 _refine.aniso_B[3][3] 0.0 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RF3 _refine_analyze.Luzzati_coordinate_error_obs 0.36 _refine_analyze.Luzzati_sigma_a_obs 0.44 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.35 _refine_analyze.Luzzati_sigma_a_free 0.41 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1709 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1709 _refine_hist.d_res_high 3.5 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.52 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.23 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.129 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.969 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.536 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.534 2.5 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_all _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_all 3 3.50 3.64 . 0.262 . 0.276 . . 19 465 . . 'X-RAY DIFFRACTION' . 3 4.03 4.29 . 0.236 . 0.263 . . 46 671 . . 'X-RAY DIFFRACTION' . 3 6.0 8.00 . 0.307 . 0.408 . . 38 676 . . 'X-RAY DIFFRACTION' . # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file protein_rep.param _pdbx_xplor_file.topol_file protein.top _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1RF3 _struct.title 'Structurally Distinct Recognition Motifs in Lymphotoxin-B Receptor and CD40 for TRAF-mediated Signaling' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RF3 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'CD40, NF-KB signaling, LTBR, TNF receptor, TRAF3 crystallography, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 3 ? ARG A 29 ? GLY A 315 ARG A 341 1 ? 27 HELX_P HELX_P2 2 PHE A 30 ? THR A 35 ? PHE A 342 THR A 347 5 ? 6 HELX_P HELX_P3 3 ASP A 48 ? GLY A 59 ? ASP A 360 GLY A 371 1 ? 12 HELX_P HELX_P4 4 ALA A 163 ? ASN A 169 ? ALA A 475 ASN A 481 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 112 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 424 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 113 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 425 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.06 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 43 ? ARG A 47 ? ILE A 355 ARG A 359 A 2 THR A 177 ? LYS A 181 ? THR A 489 LYS A 493 A 3 LEU A 120 ? LEU A 122 ? LEU A 432 LEU A 434 A 4 GLY A 133 ? ASP A 134 ? GLY A 445 ASP A 446 B 1 PHE A 69 ? TYR A 70 ? PHE A 381 TYR A 382 B 2 LYS A 77 ? MET A 78 ? LYS A 389 MET A 390 C 1 ARG A 81 ? TYR A 83 ? ARG A 393 TYR A 395 C 2 SER A 96 ? PHE A 98 ? SER A 408 PHE A 410 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 44 ? N TRP A 356 O ILE A 180 ? O ILE A 492 A 2 3 O LYS A 181 ? O LYS A 493 N MET A 121 ? N MET A 433 A 3 4 N LEU A 120 ? N LEU A 432 O ASP A 134 ? O ASP A 446 B 1 2 N PHE A 69 ? N PHE A 381 O MET A 78 ? O MET A 390 C 1 2 N ARG A 81 ? N ARG A 393 O PHE A 98 ? O PHE A 410 # _database_PDB_matrix.entry_id 1RF3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RF3 _atom_sites.fract_transf_matrix[1][1] 0.011947 _atom_sites.fract_transf_matrix[1][2] 0.006898 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013796 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012642 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 313 313 ASN ASN A . n A 1 2 THR 2 314 314 THR THR A . n A 1 3 GLY 3 315 315 GLY GLY A . n A 1 4 LEU 4 316 316 LEU LEU A . n A 1 5 LEU 5 317 317 LEU LEU A . n A 1 6 GLU 6 318 318 GLU GLU A . n A 1 7 SER 7 319 319 SER SER A . n A 1 8 GLN 8 320 320 GLN GLN A . n A 1 9 LEU 9 321 321 LEU LEU A . n A 1 10 SER 10 322 322 SER SER A . n A 1 11 ARG 11 323 323 ARG ARG A . n A 1 12 HIS 12 324 324 HIS HIS A . n A 1 13 ASP 13 325 325 ASP ASP A . n A 1 14 GLN 14 326 326 GLN GLN A . n A 1 15 MET 15 327 327 MET MET A . n A 1 16 LEU 16 328 328 LEU LEU A . n A 1 17 SER 17 329 329 SER SER A . n A 1 18 VAL 18 330 330 VAL VAL A . n A 1 19 HIS 19 331 331 HIS HIS A . n A 1 20 ASP 20 332 332 ASP ASP A . n A 1 21 ILE 21 333 333 ILE ILE A . n A 1 22 ARG 22 334 334 ARG ARG A . n A 1 23 LEU 23 335 335 LEU LEU A . n A 1 24 ALA 24 336 336 ALA ALA A . n A 1 25 ASP 25 337 337 ASP ASP A . n A 1 26 MET 26 338 338 MET MET A . n A 1 27 ASP 27 339 339 ASP ASP A . n A 1 28 LEU 28 340 340 LEU LEU A . n A 1 29 ARG 29 341 341 ARG ARG A . n A 1 30 PHE 30 342 342 PHE PHE A . n A 1 31 GLN 31 343 343 GLN GLN A . n A 1 32 VAL 32 344 344 VAL VAL A . n A 1 33 LEU 33 345 345 LEU LEU A . n A 1 34 GLU 34 346 346 GLU GLU A . n A 1 35 THR 35 347 347 THR THR A . n A 1 36 ALA 36 348 348 ALA ALA A . n A 1 37 SER 37 349 349 SER SER A . n A 1 38 TYR 38 350 350 TYR TYR A . n A 1 39 ASN 39 351 351 ASN ASN A . n A 1 40 GLY 40 352 352 GLY GLY A . n A 1 41 VAL 41 353 353 VAL VAL A . n A 1 42 LEU 42 354 354 LEU LEU A . n A 1 43 ILE 43 355 355 ILE ILE A . n A 1 44 TRP 44 356 356 TRP TRP A . n A 1 45 LYS 45 357 357 LYS LYS A . n A 1 46 ILE 46 358 358 ILE ILE A . n A 1 47 ARG 47 359 359 ARG ARG A . n A 1 48 ASP 48 360 360 ASP ASP A . n A 1 49 TYR 49 361 361 TYR TYR A . n A 1 50 LYS 50 362 362 LYS LYS A . n A 1 51 ARG 51 363 363 ARG ARG A . n A 1 52 ARG 52 364 364 ARG ARG A . n A 1 53 LYS 53 365 365 LYS LYS A . n A 1 54 GLN 54 366 366 GLN GLN A . n A 1 55 GLU 55 367 367 GLU GLU A . n A 1 56 ALA 56 368 368 ALA ALA A . n A 1 57 VAL 57 369 369 VAL VAL A . n A 1 58 MET 58 370 370 MET MET A . n A 1 59 GLY 59 371 371 GLY GLY A . n A 1 60 LYS 60 372 372 LYS LYS A . n A 1 61 THR 61 373 373 THR THR A . n A 1 62 LEU 62 374 374 LEU LEU A . n A 1 63 SER 63 375 375 SER SER A . n A 1 64 LEU 64 376 376 LEU LEU A . n A 1 65 TYR 65 377 377 TYR TYR A . n A 1 66 SER 66 378 378 SER SER A . n A 1 67 GLN 67 379 379 GLN GLN A . n A 1 68 PRO 68 380 380 PRO PRO A . n A 1 69 PHE 69 381 381 PHE PHE A . n A 1 70 TYR 70 382 382 TYR TYR A . n A 1 71 THR 71 383 383 THR THR A . n A 1 72 GLY 72 384 384 GLY GLY A . n A 1 73 TYR 73 385 385 TYR TYR A . n A 1 74 PHE 74 386 386 PHE PHE A . n A 1 75 GLY 75 387 387 GLY GLY A . n A 1 76 TYR 76 388 388 TYR TYR A . n A 1 77 LYS 77 389 389 LYS LYS A . n A 1 78 MET 78 390 390 MET MET A . n A 1 79 CYS 79 391 391 CYS CYS A . n A 1 80 ALA 80 392 392 ALA ALA A . n A 1 81 ARG 81 393 393 ARG ARG A . n A 1 82 VAL 82 394 394 VAL VAL A . n A 1 83 TYR 83 395 395 TYR TYR A . n A 1 84 LEU 84 396 396 LEU LEU A . n A 1 85 ASN 85 397 397 ASN ASN A . n A 1 86 GLY 86 398 398 GLY GLY A . n A 1 87 ASP 87 399 399 ASP ASP A . n A 1 88 GLY 88 400 400 GLY GLY A . n A 1 89 MET 89 401 401 MET MET A . n A 1 90 GLY 90 402 402 GLY GLY A . n A 1 91 LYS 91 403 403 LYS LYS A . n A 1 92 GLY 92 404 404 GLY GLY A . n A 1 93 THR 93 405 405 THR THR A . n A 1 94 HIS 94 406 406 HIS HIS A . n A 1 95 LEU 95 407 407 LEU LEU A . n A 1 96 SER 96 408 408 SER SER A . n A 1 97 LEU 97 409 409 LEU LEU A . n A 1 98 PHE 98 410 410 PHE PHE A . n A 1 99 PHE 99 411 411 PHE PHE A . n A 1 100 VAL 100 412 412 VAL VAL A . n A 1 101 ILE 101 413 413 ILE ILE A . n A 1 102 MET 102 414 414 MET MET A . n A 1 103 ARG 103 415 415 ARG ARG A . n A 1 104 GLY 104 416 416 GLY GLY A . n A 1 105 GLU 105 417 417 GLU GLU A . n A 1 106 TYR 106 418 418 TYR TYR A . n A 1 107 ASP 107 419 419 ASP ASP A . n A 1 108 ALA 108 420 420 ALA ALA A . n A 1 109 LEU 109 421 421 LEU LEU A . n A 1 110 LEU 110 422 422 LEU LEU A . n A 1 111 PRO 111 423 423 PRO PRO A . n A 1 112 TRP 112 424 424 TRP TRP A . n A 1 113 PRO 113 425 425 PRO PRO A . n A 1 114 PHE 114 426 426 PHE PHE A . n A 1 115 LYS 115 427 427 LYS LYS A . n A 1 116 GLN 116 428 428 GLN GLN A . n A 1 117 LYS 117 429 429 LYS LYS A . n A 1 118 VAL 118 430 430 VAL VAL A . n A 1 119 THR 119 431 431 THR THR A . n A 1 120 LEU 120 432 432 LEU LEU A . n A 1 121 MET 121 433 433 MET MET A . n A 1 122 LEU 122 434 434 LEU LEU A . n A 1 123 MET 123 435 435 MET MET A . n A 1 124 ASP 124 436 436 ASP ASP A . n A 1 125 GLN 125 437 437 GLN GLN A . n A 1 126 GLY 126 438 438 GLY GLY A . n A 1 127 SER 127 439 439 SER SER A . n A 1 128 SER 128 440 440 SER SER A . n A 1 129 ARG 129 441 441 ARG ARG A . n A 1 130 ARG 130 442 442 ARG ARG A . n A 1 131 HIS 131 443 443 HIS HIS A . n A 1 132 LEU 132 444 444 LEU LEU A . n A 1 133 GLY 133 445 445 GLY GLY A . n A 1 134 ASP 134 446 446 ASP ASP A . n A 1 135 ALA 135 447 447 ALA ALA A . n A 1 136 PHE 136 448 448 PHE PHE A . n A 1 137 LYS 137 449 449 LYS LYS A . n A 1 138 PRO 138 450 450 PRO PRO A . n A 1 139 ASP 139 451 451 ASP ASP A . n A 1 140 PRO 140 452 452 PRO PRO A . n A 1 141 ASN 141 453 453 ASN ASN A . n A 1 142 SER 142 454 454 SER SER A . n A 1 143 SER 143 455 455 SER SER A . n A 1 144 SER 144 456 456 SER SER A . n A 1 145 PHE 145 457 457 PHE PHE A . n A 1 146 LYS 146 458 458 LYS LYS A . n A 1 147 LYS 147 459 459 LYS LYS A . n A 1 148 PRO 148 460 460 PRO PRO A . n A 1 149 THR 149 461 461 THR THR A . n A 1 150 GLY 150 462 462 GLY GLY A . n A 1 151 GLU 151 463 463 GLU GLU A . n A 1 152 MET 152 464 464 MET MET A . n A 1 153 ASN 153 465 465 ASN ASN A . n A 1 154 ILE 154 466 466 ILE ILE A . n A 1 155 ALA 155 467 467 ALA ALA A . n A 1 156 SER 156 468 468 SER SER A . n A 1 157 GLY 157 469 469 GLY GLY A . n A 1 158 CYS 158 470 470 CYS CYS A . n A 1 159 PRO 159 471 471 PRO PRO A . n A 1 160 VAL 160 472 472 VAL VAL A . n A 1 161 PHE 161 473 473 PHE PHE A . n A 1 162 VAL 162 474 474 VAL VAL A . n A 1 163 ALA 163 475 475 ALA ALA A . n A 1 164 GLN 164 476 476 GLN GLN A . n A 1 165 THR 165 477 477 THR THR A . n A 1 166 VAL 166 478 478 VAL VAL A . n A 1 167 LEU 167 479 479 LEU LEU A . n A 1 168 GLU 168 480 480 GLU GLU A . n A 1 169 ASN 169 481 481 ASN ASN A . n A 1 170 GLY 170 482 482 GLY GLY A . n A 1 171 THR 171 483 483 THR THR A . n A 1 172 TYR 172 484 484 TYR TYR A . n A 1 173 ILE 173 485 485 ILE ILE A . n A 1 174 LYS 174 486 486 LYS LYS A . n A 1 175 ASP 175 487 487 ASP ASP A . n A 1 176 ASP 176 488 488 ASP ASP A . n A 1 177 THR 177 489 489 THR THR A . n A 1 178 ILE 178 490 490 ILE ILE A . n A 1 179 PHE 179 491 491 PHE PHE A . n A 1 180 ILE 180 492 492 ILE ILE A . n A 1 181 LYS 181 493 493 LYS LYS A . n A 1 182 VAL 182 494 494 VAL VAL A . n A 1 183 ILE 183 495 495 ILE ILE A . n A 1 184 VAL 184 496 496 VAL VAL A . n A 1 185 ASP 185 497 497 ASP ASP A . n A 1 186 THR 186 498 498 THR THR A . n A 1 187 SER 187 499 499 SER SER A . n A 1 188 ASP 188 500 500 ASP ASP A . n A 1 189 LEU 189 501 501 LEU LEU A . n A 1 190 PRO 190 502 502 PRO PRO A . n A 1 191 ASP 191 503 503 ASP ASP A . n A 1 192 PRO 192 504 504 PRO PRO A . n A 1 193 LEU 193 505 ? ? ? A . n A 1 194 GLU 194 506 ? ? ? A . n A 1 195 HIS 195 507 ? ? ? A . n A 1 196 HIS 196 508 ? ? ? A . n A 1 197 HIS 197 509 ? ? ? A . n A 1 198 HIS 198 510 ? ? ? A . n A 1 199 HIS 199 511 ? ? ? A . n A 1 200 HIS 200 512 ? ? ? A . n B 2 1 PRO 1 385 385 PRO PRO B . n B 2 2 TYR 2 386 386 TYR TYR B . n B 2 3 PRO 3 387 387 PRO PRO B . n B 2 4 ILE 4 388 388 ILE ILE B . n B 2 5 PRO 5 389 389 PRO PRO B . n B 2 6 GLU 6 390 390 GLU GLU B . n B 2 7 GLU 7 391 391 GLU GLU B . n B 2 8 GLY 8 392 392 GLY GLY B . n B 2 9 ASP 9 393 393 ASP ASP B . n B 2 10 PRO 10 394 394 PRO PRO B . n B 2 11 GLY 11 395 395 GLY GLY B . n B 2 12 PRO 12 396 396 PRO PRO B . n B 2 13 PRO 13 397 397 PRO PRO B . n B 2 14 GLY 14 398 398 GLY GLY B . n B 2 15 LEU 15 399 399 LEU LEU B . n B 2 16 SER 16 400 400 SER SER B . n B 2 17 THR 17 401 401 THR THR B . n B 2 18 PRO 18 402 402 PRO PRO B . n B 2 19 HIS 19 403 403 HIS HIS B . n B 2 20 GLN 20 404 404 GLN GLN B . n B 2 21 GLU 21 405 405 GLU GLU B . n B 2 22 ASP 22 406 406 ASP ASP B . n B 2 23 GLY 23 407 407 GLY GLY B . n B 2 24 LYS 24 408 408 LYS LYS B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 41.8500000000 0.8660254038 -0.5000000000 0.0000000000 72.4863262968 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -41.8500000000 -0.8660254038 -0.5000000000 0.0000000000 72.4863262968 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-06 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 459 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 460 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 460 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.89 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.59 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 314 ? ? -69.61 15.89 2 1 ARG A 334 ? ? -53.67 -71.97 3 1 MET A 338 ? ? -59.70 -1.22 4 1 ARG A 341 ? ? -69.86 25.30 5 1 LEU A 345 ? ? -76.26 45.21 6 1 GLU A 346 ? ? -158.55 -23.41 7 1 LEU A 354 ? ? 159.48 149.98 8 1 LYS A 365 ? ? -48.27 -76.20 9 1 GLN A 366 ? ? -42.31 -71.18 10 1 GLU A 367 ? ? -32.58 -30.06 11 1 LEU A 374 ? ? -169.55 76.82 12 1 SER A 375 ? ? 161.59 63.23 13 1 TYR A 377 ? ? -120.66 -153.05 14 1 THR A 383 ? ? -101.43 43.95 15 1 TYR A 385 ? ? -13.59 -53.83 16 1 LEU A 396 ? ? -16.67 -69.75 17 1 ASP A 399 ? ? -133.55 -152.46 18 1 LYS A 403 ? ? -27.71 -69.43 19 1 THR A 405 ? ? -20.88 -68.49 20 1 VAL A 412 ? ? -178.62 144.82 21 1 PRO A 425 ? ? -77.13 -163.67 22 1 LYS A 427 ? ? 178.69 75.41 23 1 VAL A 430 ? ? -156.41 82.56 24 1 MET A 435 ? ? -69.26 -155.84 25 1 ASP A 436 ? ? -170.82 98.73 26 1 GLN A 437 ? ? -93.10 49.42 27 1 SER A 439 ? ? 173.08 14.64 28 1 SER A 440 ? ? -148.05 -12.04 29 1 ARG A 442 ? ? -105.47 46.08 30 1 ASN A 453 ? ? -41.82 -70.26 31 1 SER A 456 ? ? -176.26 -8.35 32 1 LYS A 459 ? ? -29.12 118.46 33 1 THR A 461 ? ? -109.47 -63.85 34 1 ILE A 466 ? ? -56.49 88.94 35 1 ALA A 467 ? ? -35.54 93.86 36 1 PRO A 471 ? ? -30.81 -95.48 37 1 PHE A 473 ? ? -143.21 -125.04 38 1 GLN A 476 ? ? -3.83 -95.28 39 1 ASN A 481 ? ? -107.49 67.94 40 1 ASP A 497 ? ? -81.12 -115.34 41 1 THR A 498 ? ? 131.85 -47.35 42 1 ASP A 500 ? ? -67.47 48.68 43 1 LEU A 501 ? ? -154.83 87.33 44 1 PRO A 502 ? ? -35.51 97.80 45 1 PRO B 387 ? ? -115.61 -157.69 46 1 PRO B 389 ? ? -71.25 -107.03 47 1 GLU B 390 ? ? 172.92 160.68 48 1 PRO B 394 ? ? -31.35 129.57 49 1 LEU B 399 ? ? -67.96 22.91 50 1 SER B 400 ? ? 94.59 51.12 51 1 THR B 401 ? ? -161.85 -57.27 52 1 PRO B 402 ? ? -18.75 142.17 53 1 HIS B 403 ? ? 168.12 -165.48 54 1 GLN B 404 ? ? 170.47 124.44 55 1 ASP B 406 ? ? -175.29 -131.79 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 505 ? A LEU 193 2 1 Y 1 A GLU 506 ? A GLU 194 3 1 Y 1 A HIS 507 ? A HIS 195 4 1 Y 1 A HIS 508 ? A HIS 196 5 1 Y 1 A HIS 509 ? A HIS 197 6 1 Y 1 A HIS 510 ? A HIS 198 7 1 Y 1 A HIS 511 ? A HIS 199 8 1 Y 1 A HIS 512 ? A HIS 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1L0A _pdbx_initial_refinement_model.details 'PDB ENTRY 1L0A' #