data_1RK3 # _entry.id 1RK3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RK3 pdb_00001rk3 10.2210/pdb1rk3/pdb RCSB RCSB020824 ? ? WWPDB D_1000020824 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1RJK 'same protein complexed with 2MD [2-methylene-19-nor-(20S)-1alpha,25-dihydroxyvitamin D3]' unspecified PDB 1RKG 'same protein complexed with 2MbisP [1alpha-hydroxy-2-methylene-19-nor-(20S)-bishomopregnacalciferol]' unspecified PDB 1RKH 'same protein complexed with 2AM20R [2alpha-methyl-19-nor-1,25-dihydroxyvitamin D3]' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RK3 _pdbx_database_status.recvd_initial_deposition_date 2003-11-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vanhooke, J.L.' 1 'M Benning, M.' 2 'Bauer, C.B.' 3 'Pike, J.W.' 4 'DeLuca, H.F.' 5 # _citation.id primary _citation.title ;Molecular Structure of the Rat Vitamin D Receptor Ligand Binding Domain Complexed with 2-Carbon-Substituted Vitamin D(3) Hormone Analogues and a LXXLL-Containing Coactivator Peptide ; _citation.journal_abbrev Biochemistry _citation.journal_volume 43 _citation.page_first 4101 _citation.page_last 4110 _citation.year 2004 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15065852 _citation.pdbx_database_id_DOI 10.1021/bi036056y # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vanhooke, J.L.' 1 ? primary 'Benning, M.M.' 2 ? primary 'Bauer, C.B.' 3 ? primary 'Pike, J.W.' 4 ? primary 'DeLuca, H.F.' 5 ? # _cell.entry_id 1RK3 _cell.length_a 154.726 _cell.length_b 44.154 _cell.length_c 42.072 _cell.angle_alpha 90.00 _cell.angle_beta 96.13 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RK3 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vitamin D3 receptor' 32983.730 1 ? 'Chain A, DEL(165-211)' 'ligand binding domain' ? 2 polymer syn 'Peroxisome proliferator-activated receptor binding protein' 1570.898 1 ? ? 'DRIP 205 NR2 box peptide' ? 3 non-polymer syn '5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL' 416.636 1 ? ? ? ? 4 water nat water 18.015 92 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'VDR, 1,25-dihydroxyvitamin D3 receptor' 2 ;PBP, PPAR binding protein, Thyroid hormone receptor-associated protein complex 220 kDa component, Trap220, Thyroid receptor interacting protein 2, TRIP2, p53 regulatory protein RB18A, Vitamin D receptor-interacting protein complex component DRIP205, Activator-recruited cofactor 205 kDa component, ARC205 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;LKDSLRPKLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMDGSTGSVTLDLSPLSMLPHLADLVSYSIQKVIGFAK MIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLH EEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSF QPENSMKLTPLVLEVFGNEISLVPRGSMAISDPNSSSVDKLAAALEHHHHHH ; ;LKDSLRPKLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMDGSTGSVTLDLSPLSMLPHLADLVSYSIQKVIGFAK MIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLH EEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSF QPENSMKLTPLVLEVFGNEISLVPRGSMAISDPNSSSVDKLAAALEHHHHHH ; A ? 2 'polypeptide(L)' no no KNHPMLMNLLKDN KNHPMLMNLLKDN C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 LYS n 1 3 ASP n 1 4 SER n 1 5 LEU n 1 6 ARG n 1 7 PRO n 1 8 LYS n 1 9 LEU n 1 10 SER n 1 11 GLU n 1 12 GLU n 1 13 GLN n 1 14 GLN n 1 15 HIS n 1 16 ILE n 1 17 ILE n 1 18 ALA n 1 19 ILE n 1 20 LEU n 1 21 LEU n 1 22 ASP n 1 23 ALA n 1 24 HIS n 1 25 HIS n 1 26 LYS n 1 27 THR n 1 28 TYR n 1 29 ASP n 1 30 PRO n 1 31 THR n 1 32 TYR n 1 33 ALA n 1 34 ASP n 1 35 PHE n 1 36 ARG n 1 37 ASP n 1 38 PHE n 1 39 ARG n 1 40 PRO n 1 41 PRO n 1 42 VAL n 1 43 ARG n 1 44 MET n 1 45 ASP n 1 46 GLY n 1 47 SER n 1 48 THR n 1 49 GLY n 1 50 SER n 1 51 VAL n 1 52 THR n 1 53 LEU n 1 54 ASP n 1 55 LEU n 1 56 SER n 1 57 PRO n 1 58 LEU n 1 59 SER n 1 60 MET n 1 61 LEU n 1 62 PRO n 1 63 HIS n 1 64 LEU n 1 65 ALA n 1 66 ASP n 1 67 LEU n 1 68 VAL n 1 69 SER n 1 70 TYR n 1 71 SER n 1 72 ILE n 1 73 GLN n 1 74 LYS n 1 75 VAL n 1 76 ILE n 1 77 GLY n 1 78 PHE n 1 79 ALA n 1 80 LYS n 1 81 MET n 1 82 ILE n 1 83 PRO n 1 84 GLY n 1 85 PHE n 1 86 ARG n 1 87 ASP n 1 88 LEU n 1 89 THR n 1 90 SER n 1 91 ASP n 1 92 ASP n 1 93 GLN n 1 94 ILE n 1 95 VAL n 1 96 LEU n 1 97 LEU n 1 98 LYS n 1 99 SER n 1 100 SER n 1 101 ALA n 1 102 ILE n 1 103 GLU n 1 104 VAL n 1 105 ILE n 1 106 MET n 1 107 LEU n 1 108 ARG n 1 109 SER n 1 110 ASN n 1 111 GLN n 1 112 SER n 1 113 PHE n 1 114 THR n 1 115 MET n 1 116 ASP n 1 117 ASP n 1 118 MET n 1 119 SER n 1 120 TRP n 1 121 ASP n 1 122 CYS n 1 123 GLY n 1 124 SER n 1 125 GLN n 1 126 ASP n 1 127 TYR n 1 128 LYS n 1 129 TYR n 1 130 ASP n 1 131 VAL n 1 132 THR n 1 133 ASP n 1 134 VAL n 1 135 SER n 1 136 LYS n 1 137 ALA n 1 138 GLY n 1 139 HIS n 1 140 THR n 1 141 LEU n 1 142 GLU n 1 143 LEU n 1 144 ILE n 1 145 GLU n 1 146 PRO n 1 147 LEU n 1 148 ILE n 1 149 LYS n 1 150 PHE n 1 151 GLN n 1 152 VAL n 1 153 GLY n 1 154 LEU n 1 155 LYS n 1 156 LYS n 1 157 LEU n 1 158 ASN n 1 159 LEU n 1 160 HIS n 1 161 GLU n 1 162 GLU n 1 163 GLU n 1 164 HIS n 1 165 VAL n 1 166 LEU n 1 167 LEU n 1 168 MET n 1 169 ALA n 1 170 ILE n 1 171 CYS n 1 172 ILE n 1 173 VAL n 1 174 SER n 1 175 PRO n 1 176 ASP n 1 177 ARG n 1 178 PRO n 1 179 GLY n 1 180 VAL n 1 181 GLN n 1 182 ASP n 1 183 ALA n 1 184 LYS n 1 185 LEU n 1 186 VAL n 1 187 GLU n 1 188 ALA n 1 189 ILE n 1 190 GLN n 1 191 ASP n 1 192 ARG n 1 193 LEU n 1 194 SER n 1 195 ASN n 1 196 THR n 1 197 LEU n 1 198 GLN n 1 199 THR n 1 200 TYR n 1 201 ILE n 1 202 ARG n 1 203 CYS n 1 204 ARG n 1 205 HIS n 1 206 PRO n 1 207 PRO n 1 208 PRO n 1 209 GLY n 1 210 SER n 1 211 HIS n 1 212 GLN n 1 213 LEU n 1 214 TYR n 1 215 ALA n 1 216 LYS n 1 217 MET n 1 218 ILE n 1 219 GLN n 1 220 LYS n 1 221 LEU n 1 222 ALA n 1 223 ASP n 1 224 LEU n 1 225 ARG n 1 226 SER n 1 227 LEU n 1 228 ASN n 1 229 GLU n 1 230 GLU n 1 231 HIS n 1 232 SER n 1 233 LYS n 1 234 GLN n 1 235 TYR n 1 236 ARG n 1 237 SER n 1 238 LEU n 1 239 SER n 1 240 PHE n 1 241 GLN n 1 242 PRO n 1 243 GLU n 1 244 ASN n 1 245 SER n 1 246 MET n 1 247 LYS n 1 248 LEU n 1 249 THR n 1 250 PRO n 1 251 LEU n 1 252 VAL n 1 253 LEU n 1 254 GLU n 1 255 VAL n 1 256 PHE n 1 257 GLY n 1 258 ASN n 1 259 GLU n 1 260 ILE n 1 261 SER n 1 262 LEU n 1 263 VAL n 1 264 PRO n 1 265 ARG n 1 266 GLY n 1 267 SER n 1 268 MET n 1 269 ALA n 1 270 ILE n 1 271 SER n 1 272 ASP n 1 273 PRO n 1 274 ASN n 1 275 SER n 1 276 SER n 1 277 SER n 1 278 VAL n 1 279 ASP n 1 280 LYS n 1 281 LEU n 1 282 ALA n 1 283 ALA n 1 284 ALA n 1 285 LEU n 1 286 GLU n 1 287 HIS n 1 288 HIS n 1 289 HIS n 1 290 HIS n 1 291 HIS n 1 292 HIS n 2 1 LYS n 2 2 ASN n 2 3 HIS n 2 4 PRO n 2 5 MET n 2 6 LEU n 2 7 MET n 2 8 ASN n 2 9 LEU n 2 10 LEU n 2 11 LYS n 2 12 ASP n 2 13 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene 'VDR, NR1I1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL-21(DE3) CodonPlus RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-29b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VDR_RAT P13053 1 ;LKDSLRPKLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVRMDGSTGSYSPRPTLSFSGNSSSSSSDLYTTSLDMMEP SGFSNLDLNGEDSDDPSVTLDLSPLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSF TMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRL SNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGNEIS ; 116 ? 2 UNP PPRB_HUMAN Q15648 2 KNHPMLMNLLKDN 640 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RK3 A 1 ? 261 ? P13053 116 ? 423 ? 116 423 2 2 1RK3 C 1 ? 13 ? Q15648 640 ? 652 ? 625 637 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1RK3 ? A ? ? UNP P13053 SER 165 deletion ? 1 1 1RK3 ? A ? ? UNP P13053 TYR 166 deletion ? 2 1 1RK3 ? A ? ? UNP P13053 SER 167 deletion ? 3 1 1RK3 ? A ? ? UNP P13053 PRO 168 deletion ? 4 1 1RK3 ? A ? ? UNP P13053 ARG 169 deletion ? 5 1 1RK3 ? A ? ? UNP P13053 PRO 170 deletion ? 6 1 1RK3 ? A ? ? UNP P13053 THR 171 deletion ? 7 1 1RK3 ? A ? ? UNP P13053 LEU 172 deletion ? 8 1 1RK3 ? A ? ? UNP P13053 SER 173 deletion ? 9 1 1RK3 ? A ? ? UNP P13053 PHE 174 deletion ? 10 1 1RK3 ? A ? ? UNP P13053 SER 175 deletion ? 11 1 1RK3 ? A ? ? UNP P13053 GLY 176 deletion ? 12 1 1RK3 ? A ? ? UNP P13053 ASN 177 deletion ? 13 1 1RK3 ? A ? ? UNP P13053 SER 178 deletion ? 14 1 1RK3 ? A ? ? UNP P13053 SER 179 deletion ? 15 1 1RK3 ? A ? ? UNP P13053 SER 180 deletion ? 16 1 1RK3 ? A ? ? UNP P13053 SER 181 deletion ? 17 1 1RK3 ? A ? ? UNP P13053 SER 182 deletion ? 18 1 1RK3 ? A ? ? UNP P13053 SER 183 deletion ? 19 1 1RK3 ? A ? ? UNP P13053 ASP 184 deletion ? 20 1 1RK3 ? A ? ? UNP P13053 LEU 185 deletion ? 21 1 1RK3 ? A ? ? UNP P13053 TYR 186 deletion ? 22 1 1RK3 ? A ? ? UNP P13053 THR 187 deletion ? 23 1 1RK3 ? A ? ? UNP P13053 THR 188 deletion ? 24 1 1RK3 ? A ? ? UNP P13053 SER 189 deletion ? 25 1 1RK3 ? A ? ? UNP P13053 LEU 190 deletion ? 26 1 1RK3 ? A ? ? UNP P13053 ASP 191 deletion ? 27 1 1RK3 ? A ? ? UNP P13053 MET 192 deletion ? 28 1 1RK3 ? A ? ? UNP P13053 MET 193 deletion ? 29 1 1RK3 ? A ? ? UNP P13053 GLU 194 deletion ? 30 1 1RK3 ? A ? ? UNP P13053 PRO 195 deletion ? 31 1 1RK3 ? A ? ? UNP P13053 SER 196 deletion ? 32 1 1RK3 ? A ? ? UNP P13053 GLY 197 deletion ? 33 1 1RK3 ? A ? ? UNP P13053 PHE 198 deletion ? 34 1 1RK3 ? A ? ? UNP P13053 SER 199 deletion ? 35 1 1RK3 ? A ? ? UNP P13053 ASN 200 deletion ? 36 1 1RK3 ? A ? ? UNP P13053 LEU 201 deletion ? 37 1 1RK3 ? A ? ? UNP P13053 ASP 202 deletion ? 38 1 1RK3 ? A ? ? UNP P13053 LEU 203 deletion ? 39 1 1RK3 ? A ? ? UNP P13053 ASN 204 deletion ? 40 1 1RK3 ? A ? ? UNP P13053 GLY 205 deletion ? 41 1 1RK3 ? A ? ? UNP P13053 GLU 206 deletion ? 42 1 1RK3 ? A ? ? UNP P13053 ASP 207 deletion ? 43 1 1RK3 ? A ? ? UNP P13053 SER 208 deletion ? 44 1 1RK3 ? A ? ? UNP P13053 ASP 209 deletion ? 45 1 1RK3 ? A ? ? UNP P13053 ASP 210 deletion ? 46 1 1RK3 ? A ? ? UNP P13053 PRO 211 deletion ? 47 1 1RK3 LEU A 262 ? UNP P13053 ? ? 'cloning artifact' 424 48 1 1RK3 VAL A 263 ? UNP P13053 ? ? 'cloning artifact' 425 49 1 1RK3 PRO A 264 ? UNP P13053 ? ? 'cloning artifact' 426 50 1 1RK3 ARG A 265 ? UNP P13053 ? ? 'cloning artifact' 427 51 1 1RK3 GLY A 266 ? UNP P13053 ? ? 'cloning artifact' 428 52 1 1RK3 SER A 267 ? UNP P13053 ? ? 'cloning artifact' 429 53 1 1RK3 MET A 268 ? UNP P13053 ? ? 'cloning artifact' 430 54 1 1RK3 ALA A 269 ? UNP P13053 ? ? 'cloning artifact' 431 55 1 1RK3 ILE A 270 ? UNP P13053 ? ? 'cloning artifact' 432 56 1 1RK3 SER A 271 ? UNP P13053 ? ? 'cloning artifact' 433 57 1 1RK3 ASP A 272 ? UNP P13053 ? ? 'cloning artifact' 434 58 1 1RK3 PRO A 273 ? UNP P13053 ? ? 'cloning artifact' 435 59 1 1RK3 ASN A 274 ? UNP P13053 ? ? 'cloning artifact' 436 60 1 1RK3 SER A 275 ? UNP P13053 ? ? 'cloning artifact' 437 61 1 1RK3 SER A 276 ? UNP P13053 ? ? 'cloning artifact' 438 62 1 1RK3 SER A 277 ? UNP P13053 ? ? 'cloning artifact' 439 63 1 1RK3 VAL A 278 ? UNP P13053 ? ? 'cloning artifact' 440 64 1 1RK3 ASP A 279 ? UNP P13053 ? ? 'cloning artifact' 441 65 1 1RK3 LYS A 280 ? UNP P13053 ? ? 'cloning artifact' 442 66 1 1RK3 LEU A 281 ? UNP P13053 ? ? 'cloning artifact' 443 67 1 1RK3 ALA A 282 ? UNP P13053 ? ? 'cloning artifact' 444 68 1 1RK3 ALA A 283 ? UNP P13053 ? ? 'cloning artifact' 445 69 1 1RK3 ALA A 284 ? UNP P13053 ? ? 'cloning artifact' 446 70 1 1RK3 LEU A 285 ? UNP P13053 ? ? 'cloning artifact' 447 71 1 1RK3 GLU A 286 ? UNP P13053 ? ? 'cloning artifact' 448 72 1 1RK3 HIS A 287 ? UNP P13053 ? ? 'expression tag' 449 73 1 1RK3 HIS A 288 ? UNP P13053 ? ? 'expression tag' 450 74 1 1RK3 HIS A 289 ? UNP P13053 ? ? 'expression tag' 451 75 1 1RK3 HIS A 290 ? UNP P13053 ? ? 'expression tag' 452 76 1 1RK3 HIS A 291 ? UNP P13053 ? ? 'expression tag' 453 77 1 1RK3 HIS A 292 ? UNP P13053 ? ? 'expression tag' 454 78 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VDX non-polymer . '5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL' '1,25 DIHYDROXY VITAMIN D3' 'C27 H44 O3' 416.636 # _exptl.entry_id 1RK3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.48 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.07 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 4000, MOPS, ammonium citrate, isopropanol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER PROTEUM R' _diffrn_detector.pdbx_collection_date 2002-10-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Montel optics' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR591' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1RK3 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 3.0 _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 42.44 _reflns.number_all 14565 _reflns.number_obs 14475 _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.052 _reflns.pdbx_netI_over_sigmaI 10.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_all 95 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.198 _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RK3 _refine.ls_number_reflns_obs 14468 _refine.ls_number_reflns_all 14468 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.42 _refine.ls_R_factor_obs 0.19303 _refine.ls_R_factor_all 0.19303 _refine.ls_R_factor_R_work 0.19048 _refine.ls_R_factor_R_free 0.24255 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 727 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.B_iso_mean 34.700 _refine.aniso_B[1][1] -3.19 _refine.aniso_B[2][2] 3.31 _refine.aniso_B[3][3] -0.26 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.62 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 1RJK' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.270 _refine.pdbx_overall_ESU_R_Free 0.213 _refine.overall_SU_ML 0.142 _refine.overall_SU_B 5.508 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1988 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 2110 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 2061 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.384 1.990 ? 2791 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.111 5.000 ? 247 'X-RAY DIFFRACTION' ? r_chiral_restr 0.089 0.200 ? 320 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1507 'X-RAY DIFFRACTION' ? r_nbd_refined 0.208 0.200 ? 923 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.137 0.200 ? 94 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.171 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.116 0.200 ? 1 'X-RAY DIFFRACTION' ? r_mcbond_it 0.822 1.500 ? 1253 'X-RAY DIFFRACTION' ? r_mcangle_it 1.565 2.000 ? 2032 'X-RAY DIFFRACTION' ? r_scbond_it 2.438 3.000 ? 808 'X-RAY DIFFRACTION' ? r_scangle_it 3.998 4.500 ? 759 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.201 _refine_ls_shell.d_res_low 2.258 _refine_ls_shell.number_reflns_R_work 936 _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.271 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.number_reflns_obs 977 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1RK3 _struct.title ;crystal structure of the rat vitamin D receptor ligand binding domain complexed with 1,25-dihydroxyvitamin D3 and a synthetic peptide containing the NR2 box of DRIP 205 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RK3 _struct_keywords.pdbx_keywords 'hormone/growth factor receptor' _struct_keywords.text 'nuclear receptor-ligand complex, nuclear receptor-coactivator interactions, hormone-growth factor receptor COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ;The asymmetric unit contains one biological unit. The biological unit is composed of one molecule of VDR, one ligand molecule, and one molecule of the synthetic peptide ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 10 ? TYR A 28 ? SER A 125 TYR A 143 1 ? 19 HELX_P HELX_P2 2 TYR A 32 ? PHE A 38 ? TYR A 147 PHE A 153 5 ? 7 HELX_P HELX_P3 3 MET A 60 ? MET A 81 ? MET A 222 MET A 243 1 ? 22 HELX_P HELX_P4 4 GLY A 84 ? LEU A 88 ? GLY A 246 LEU A 250 5 ? 5 HELX_P HELX_P5 5 THR A 89 ? ASN A 110 ? THR A 251 ASN A 272 1 ? 22 HELX_P HELX_P6 6 SER A 124 ? ASP A 126 ? SER A 286 ASP A 288 5 ? 3 HELX_P HELX_P7 7 ASP A 130 ? LYS A 136 ? ASP A 292 LYS A 298 1 ? 7 HELX_P HELX_P8 8 THR A 140 ? LEU A 157 ? THR A 302 LEU A 319 1 ? 18 HELX_P HELX_P9 9 HIS A 160 ? VAL A 173 ? HIS A 322 VAL A 335 1 ? 14 HELX_P HELX_P10 10 ASP A 182 ? HIS A 205 ? ASP A 344 HIS A 367 1 ? 24 HELX_P HELX_P11 11 GLN A 212 ? GLN A 241 ? GLN A 374 GLN A 403 1 ? 30 HELX_P HELX_P12 12 GLN A 241 ? MET A 246 ? GLN A 403 MET A 408 1 ? 6 HELX_P HELX_P13 13 THR A 249 ? GLY A 257 ? THR A 411 GLY A 419 1 ? 9 HELX_P HELX_P14 14 HIS B 3 ? LYS B 11 ? HIS C 627 LYS C 635 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 207 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 369 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 208 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 370 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.17 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 113 ? THR A 114 ? PHE A 275 THR A 276 A 2 SER A 119 ? ASP A 121 ? SER A 281 ASP A 283 A 3 LYS A 128 ? TYR A 129 ? LYS A 290 TYR A 291 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 114 ? N THR A 276 O SER A 119 ? O SER A 281 A 2 3 N TRP A 120 ? N TRP A 282 O TYR A 129 ? O TYR A 291 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id VDX _struct_site.pdbx_auth_seq_id 500 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE VDX A 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 TYR A 28 ? TYR A 143 . ? 1_555 ? 2 AC1 12 VAL A 68 ? VAL A 230 . ? 1_555 ? 3 AC1 12 SER A 71 ? SER A 233 . ? 1_555 ? 4 AC1 12 ILE A 105 ? ILE A 267 . ? 1_555 ? 5 AC1 12 ARG A 108 ? ARG A 270 . ? 1_555 ? 6 AC1 12 SER A 109 ? SER A 271 . ? 1_555 ? 7 AC1 12 SER A 112 ? SER A 274 . ? 1_555 ? 8 AC1 12 TRP A 120 ? TRP A 282 . ? 1_555 ? 9 AC1 12 CYS A 122 ? CYS A 284 . ? 1_555 ? 10 AC1 12 VAL A 134 ? VAL A 296 . ? 1_555 ? 11 AC1 12 HIS A 139 ? HIS A 301 . ? 1_555 ? 12 AC1 12 HIS A 231 ? HIS A 393 . ? 1_555 ? # _database_PDB_matrix.entry_id 1RK3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RK3 _atom_sites.fract_transf_matrix[1][1] 0.006463 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000694 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022648 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023905 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 116 ? ? ? A . n A 1 2 LYS 2 117 ? ? ? A . n A 1 3 ASP 3 118 ? ? ? A . n A 1 4 SER 4 119 ? ? ? A . n A 1 5 LEU 5 120 ? ? ? A . n A 1 6 ARG 6 121 ? ? ? A . n A 1 7 PRO 7 122 ? ? ? A . n A 1 8 LYS 8 123 123 LYS GLY A . n A 1 9 LEU 9 124 124 LEU LEU A . n A 1 10 SER 10 125 125 SER SER A . n A 1 11 GLU 11 126 126 GLU GLU A . n A 1 12 GLU 12 127 127 GLU GLU A . n A 1 13 GLN 13 128 128 GLN GLN A . n A 1 14 GLN 14 129 129 GLN GLN A . n A 1 15 HIS 15 130 130 HIS HIS A . n A 1 16 ILE 16 131 131 ILE ILE A . n A 1 17 ILE 17 132 132 ILE ILE A . n A 1 18 ALA 18 133 133 ALA ALA A . n A 1 19 ILE 19 134 134 ILE ILE A . n A 1 20 LEU 20 135 135 LEU LEU A . n A 1 21 LEU 21 136 136 LEU LEU A . n A 1 22 ASP 22 137 137 ASP ASP A . n A 1 23 ALA 23 138 138 ALA ALA A . n A 1 24 HIS 24 139 139 HIS HIS A . n A 1 25 HIS 25 140 140 HIS HIS A . n A 1 26 LYS 26 141 141 LYS LYS A . n A 1 27 THR 27 142 142 THR THR A . n A 1 28 TYR 28 143 143 TYR TYR A . n A 1 29 ASP 29 144 144 ASP ASP A . n A 1 30 PRO 30 145 145 PRO PRO A . n A 1 31 THR 31 146 146 THR THR A . n A 1 32 TYR 32 147 147 TYR TYR A . n A 1 33 ALA 33 148 148 ALA ALA A . n A 1 34 ASP 34 149 149 ASP ASP A . n A 1 35 PHE 35 150 150 PHE PHE A . n A 1 36 ARG 36 151 151 ARG ALA A . n A 1 37 ASP 37 152 152 ASP ASP A . n A 1 38 PHE 38 153 153 PHE PHE A . n A 1 39 ARG 39 154 154 ARG ARG A . n A 1 40 PRO 40 155 155 PRO PRO A . n A 1 41 PRO 41 156 156 PRO PRO A . n A 1 42 VAL 42 157 157 VAL VAL A . n A 1 43 ARG 43 158 158 ARG ARG A . n A 1 44 MET 44 159 159 MET MET A . n A 1 45 ASP 45 160 ? ? ? A . n A 1 46 GLY 46 161 ? ? ? A . n A 1 47 SER 47 162 ? ? ? A . n A 1 48 THR 48 163 ? ? ? A . n A 1 49 GLY 49 164 ? ? ? A . n A 1 50 SER 50 212 ? ? ? A . n A 1 51 VAL 51 213 ? ? ? A . n A 1 52 THR 52 214 ? ? ? A . n A 1 53 LEU 53 215 ? ? ? A . n A 1 54 ASP 54 216 ? ? ? A . n A 1 55 LEU 55 217 ? ? ? A . n A 1 56 SER 56 218 ? ? ? A . n A 1 57 PRO 57 219 219 PRO PRO A . n A 1 58 LEU 58 220 220 LEU LEU A . n A 1 59 SER 59 221 221 SER SER A . n A 1 60 MET 60 222 222 MET MET A . n A 1 61 LEU 61 223 223 LEU LEU A . n A 1 62 PRO 62 224 224 PRO PRO A . n A 1 63 HIS 63 225 225 HIS HIS A . n A 1 64 LEU 64 226 226 LEU LEU A . n A 1 65 ALA 65 227 227 ALA ALA A . n A 1 66 ASP 66 228 228 ASP ASP A . n A 1 67 LEU 67 229 229 LEU LEU A . n A 1 68 VAL 68 230 230 VAL VAL A . n A 1 69 SER 69 231 231 SER SER A . n A 1 70 TYR 70 232 232 TYR TYR A . n A 1 71 SER 71 233 233 SER SER A . n A 1 72 ILE 72 234 234 ILE ILE A . n A 1 73 GLN 73 235 235 GLN GLN A . n A 1 74 LYS 74 236 236 LYS LYS A . n A 1 75 VAL 75 237 237 VAL VAL A . n A 1 76 ILE 76 238 238 ILE ILE A . n A 1 77 GLY 77 239 239 GLY GLY A . n A 1 78 PHE 78 240 240 PHE PHE A . n A 1 79 ALA 79 241 241 ALA ALA A . n A 1 80 LYS 80 242 242 LYS LYS A . n A 1 81 MET 81 243 243 MET MET A . n A 1 82 ILE 82 244 244 ILE ILE A . n A 1 83 PRO 83 245 245 PRO PRO A . n A 1 84 GLY 84 246 246 GLY GLY A . n A 1 85 PHE 85 247 247 PHE PHE A . n A 1 86 ARG 86 248 248 ARG ALA A . n A 1 87 ASP 87 249 249 ASP ASP A . n A 1 88 LEU 88 250 250 LEU LEU A . n A 1 89 THR 89 251 251 THR THR A . n A 1 90 SER 90 252 252 SER SER A . n A 1 91 ASP 91 253 253 ASP ASP A . n A 1 92 ASP 92 254 254 ASP ASP A . n A 1 93 GLN 93 255 255 GLN GLN A . n A 1 94 ILE 94 256 256 ILE ILE A . n A 1 95 VAL 95 257 257 VAL VAL A . n A 1 96 LEU 96 258 258 LEU LEU A . n A 1 97 LEU 97 259 259 LEU LEU A . n A 1 98 LYS 98 260 260 LYS LYS A . n A 1 99 SER 99 261 261 SER SER A . n A 1 100 SER 100 262 262 SER SER A . n A 1 101 ALA 101 263 263 ALA ALA A . n A 1 102 ILE 102 264 264 ILE ILE A . n A 1 103 GLU 103 265 265 GLU GLU A . n A 1 104 VAL 104 266 266 VAL VAL A . n A 1 105 ILE 105 267 267 ILE ILE A . n A 1 106 MET 106 268 268 MET MET A . n A 1 107 LEU 107 269 269 LEU LEU A . n A 1 108 ARG 108 270 270 ARG ARG A . n A 1 109 SER 109 271 271 SER SER A . n A 1 110 ASN 110 272 272 ASN ASN A . n A 1 111 GLN 111 273 273 GLN GLN A . n A 1 112 SER 112 274 274 SER SER A . n A 1 113 PHE 113 275 275 PHE PHE A . n A 1 114 THR 114 276 276 THR THR A . n A 1 115 MET 115 277 277 MET MET A . n A 1 116 ASP 116 278 278 ASP ASP A . n A 1 117 ASP 117 279 279 ASP ASP A . n A 1 118 MET 118 280 280 MET MET A . n A 1 119 SER 119 281 281 SER SER A . n A 1 120 TRP 120 282 282 TRP TRP A . n A 1 121 ASP 121 283 283 ASP ASP A . n A 1 122 CYS 122 284 284 CYS CYS A . n A 1 123 GLY 123 285 285 GLY GLY A . n A 1 124 SER 124 286 286 SER SER A . n A 1 125 GLN 125 287 287 GLN GLN A . n A 1 126 ASP 126 288 288 ASP ASP A . n A 1 127 TYR 127 289 289 TYR TYR A . n A 1 128 LYS 128 290 290 LYS LYS A . n A 1 129 TYR 129 291 291 TYR TYR A . n A 1 130 ASP 130 292 292 ASP ASP A . n A 1 131 VAL 131 293 293 VAL VAL A . n A 1 132 THR 132 294 294 THR THR A . n A 1 133 ASP 133 295 295 ASP ASP A . n A 1 134 VAL 134 296 296 VAL VAL A . n A 1 135 SER 135 297 297 SER SER A . n A 1 136 LYS 136 298 298 LYS LYS A . n A 1 137 ALA 137 299 299 ALA ALA A . n A 1 138 GLY 138 300 300 GLY GLY A . n A 1 139 HIS 139 301 301 HIS HIS A . n A 1 140 THR 140 302 302 THR THR A . n A 1 141 LEU 141 303 303 LEU LEU A . n A 1 142 GLU 142 304 304 GLU GLU A . n A 1 143 LEU 143 305 305 LEU LEU A . n A 1 144 ILE 144 306 306 ILE ILE A . n A 1 145 GLU 145 307 307 GLU GLU A . n A 1 146 PRO 146 308 308 PRO PRO A . n A 1 147 LEU 147 309 309 LEU LEU A . n A 1 148 ILE 148 310 310 ILE ILE A . n A 1 149 LYS 149 311 311 LYS LYS A . n A 1 150 PHE 150 312 312 PHE PHE A . n A 1 151 GLN 151 313 313 GLN GLN A . n A 1 152 VAL 152 314 314 VAL VAL A . n A 1 153 GLY 153 315 315 GLY GLY A . n A 1 154 LEU 154 316 316 LEU LEU A . n A 1 155 LYS 155 317 317 LYS LYS A . n A 1 156 LYS 156 318 318 LYS LYS A . n A 1 157 LEU 157 319 319 LEU LEU A . n A 1 158 ASN 158 320 320 ASN ASN A . n A 1 159 LEU 159 321 321 LEU LEU A . n A 1 160 HIS 160 322 322 HIS HIS A . n A 1 161 GLU 161 323 323 GLU GLU A . n A 1 162 GLU 162 324 324 GLU GLU A . n A 1 163 GLU 163 325 325 GLU GLU A . n A 1 164 HIS 164 326 326 HIS HIS A . n A 1 165 VAL 165 327 327 VAL VAL A . n A 1 166 LEU 166 328 328 LEU LEU A . n A 1 167 LEU 167 329 329 LEU LEU A . n A 1 168 MET 168 330 330 MET MET A . n A 1 169 ALA 169 331 331 ALA ALA A . n A 1 170 ILE 170 332 332 ILE ILE A . n A 1 171 CYS 171 333 333 CYS CYS A . n A 1 172 ILE 172 334 334 ILE ILE A . n A 1 173 VAL 173 335 335 VAL VAL A . n A 1 174 SER 174 336 336 SER SER A . n A 1 175 PRO 175 337 337 PRO PRO A . n A 1 176 ASP 176 338 338 ASP ASP A . n A 1 177 ARG 177 339 339 ARG ARG A . n A 1 178 PRO 178 340 340 PRO PRO A . n A 1 179 GLY 179 341 341 GLY GLY A . n A 1 180 VAL 180 342 342 VAL VAL A . n A 1 181 GLN 181 343 343 GLN GLN A . n A 1 182 ASP 182 344 344 ASP ASP A . n A 1 183 ALA 183 345 345 ALA ALA A . n A 1 184 LYS 184 346 346 LYS LYS A . n A 1 185 LEU 185 347 347 LEU LEU A . n A 1 186 VAL 186 348 348 VAL VAL A . n A 1 187 GLU 187 349 349 GLU GLU A . n A 1 188 ALA 188 350 350 ALA ALA A . n A 1 189 ILE 189 351 351 ILE ILE A . n A 1 190 GLN 190 352 352 GLN GLN A . n A 1 191 ASP 191 353 353 ASP ASP A . n A 1 192 ARG 192 354 354 ARG ARG A . n A 1 193 LEU 193 355 355 LEU LEU A . n A 1 194 SER 194 356 356 SER SER A . n A 1 195 ASN 195 357 357 ASN ASN A . n A 1 196 THR 196 358 358 THR THR A . n A 1 197 LEU 197 359 359 LEU LEU A . n A 1 198 GLN 198 360 360 GLN GLN A . n A 1 199 THR 199 361 361 THR THR A . n A 1 200 TYR 200 362 362 TYR TYR A . n A 1 201 ILE 201 363 363 ILE ILE A . n A 1 202 ARG 202 364 364 ARG ARG A . n A 1 203 CYS 203 365 365 CYS CYS A . n A 1 204 ARG 204 366 366 ARG ARG A . n A 1 205 HIS 205 367 367 HIS HIS A . n A 1 206 PRO 206 368 368 PRO PRO A . n A 1 207 PRO 207 369 369 PRO PRO A . n A 1 208 PRO 208 370 370 PRO PRO A . n A 1 209 GLY 209 371 371 GLY GLY A . n A 1 210 SER 210 372 372 SER SER A . n A 1 211 HIS 211 373 373 HIS HIS A . n A 1 212 GLN 212 374 374 GLN GLN A . n A 1 213 LEU 213 375 375 LEU LEU A . n A 1 214 TYR 214 376 376 TYR TYR A . n A 1 215 ALA 215 377 377 ALA ALA A . n A 1 216 LYS 216 378 378 LYS LYS A . n A 1 217 MET 217 379 379 MET MET A . n A 1 218 ILE 218 380 380 ILE ILE A . n A 1 219 GLN 219 381 381 GLN GLN A . n A 1 220 LYS 220 382 382 LYS LYS A . n A 1 221 LEU 221 383 383 LEU LEU A . n A 1 222 ALA 222 384 384 ALA ALA A . n A 1 223 ASP 223 385 385 ASP ASP A . n A 1 224 LEU 224 386 386 LEU LEU A . n A 1 225 ARG 225 387 387 ARG ARG A . n A 1 226 SER 226 388 388 SER SER A . n A 1 227 LEU 227 389 389 LEU LEU A . n A 1 228 ASN 228 390 390 ASN ASN A . n A 1 229 GLU 229 391 391 GLU GLU A . n A 1 230 GLU 230 392 392 GLU GLU A . n A 1 231 HIS 231 393 393 HIS HIS A . n A 1 232 SER 232 394 394 SER SER A . n A 1 233 LYS 233 395 395 LYS LYS A . n A 1 234 GLN 234 396 396 GLN GLN A . n A 1 235 TYR 235 397 397 TYR TYR A . n A 1 236 ARG 236 398 398 ARG ARG A . n A 1 237 SER 237 399 399 SER SER A . n A 1 238 LEU 238 400 400 LEU LEU A . n A 1 239 SER 239 401 401 SER SER A . n A 1 240 PHE 240 402 402 PHE PHE A . n A 1 241 GLN 241 403 403 GLN ALA A . n A 1 242 PRO 242 404 404 PRO PRO A . n A 1 243 GLU 243 405 405 GLU GLU A . n A 1 244 ASN 244 406 406 ASN ASN A . n A 1 245 SER 245 407 407 SER SER A . n A 1 246 MET 246 408 408 MET MET A . n A 1 247 LYS 247 409 409 LYS LYS A . n A 1 248 LEU 248 410 410 LEU LEU A . n A 1 249 THR 249 411 411 THR THR A . n A 1 250 PRO 250 412 412 PRO PRO A . n A 1 251 LEU 251 413 413 LEU LEU A . n A 1 252 VAL 252 414 414 VAL VAL A . n A 1 253 LEU 253 415 415 LEU LEU A . n A 1 254 GLU 254 416 416 GLU GLU A . n A 1 255 VAL 255 417 417 VAL VAL A . n A 1 256 PHE 256 418 418 PHE PHE A . n A 1 257 GLY 257 419 419 GLY GLY A . n A 1 258 ASN 258 420 420 ASN ASN A . n A 1 259 GLU 259 421 ? ? ? A . n A 1 260 ILE 260 422 ? ? ? A . n A 1 261 SER 261 423 ? ? ? A . n A 1 262 LEU 262 424 ? ? ? A . n A 1 263 VAL 263 425 ? ? ? A . n A 1 264 PRO 264 426 ? ? ? A . n A 1 265 ARG 265 427 ? ? ? A . n A 1 266 GLY 266 428 ? ? ? A . n A 1 267 SER 267 429 ? ? ? A . n A 1 268 MET 268 430 ? ? ? A . n A 1 269 ALA 269 431 ? ? ? A . n A 1 270 ILE 270 432 ? ? ? A . n A 1 271 SER 271 433 ? ? ? A . n A 1 272 ASP 272 434 ? ? ? A . n A 1 273 PRO 273 435 ? ? ? A . n A 1 274 ASN 274 436 ? ? ? A . n A 1 275 SER 275 437 ? ? ? A . n A 1 276 SER 276 438 ? ? ? A . n A 1 277 SER 277 439 ? ? ? A . n A 1 278 VAL 278 440 ? ? ? A . n A 1 279 ASP 279 441 ? ? ? A . n A 1 280 LYS 280 442 ? ? ? A . n A 1 281 LEU 281 443 ? ? ? A . n A 1 282 ALA 282 444 ? ? ? A . n A 1 283 ALA 283 445 ? ? ? A . n A 1 284 ALA 284 446 ? ? ? A . n A 1 285 LEU 285 447 ? ? ? A . n A 1 286 GLU 286 448 ? ? ? A . n A 1 287 HIS 287 449 ? ? ? A . n A 1 288 HIS 288 450 ? ? ? A . n A 1 289 HIS 289 451 ? ? ? A . n A 1 290 HIS 290 452 ? ? ? A . n A 1 291 HIS 291 453 ? ? ? A . n A 1 292 HIS 292 454 ? ? ? A . n B 2 1 LYS 1 625 625 LYS LYS C . n B 2 2 ASN 2 626 626 ASN ASN C . n B 2 3 HIS 3 627 627 HIS HIS C . n B 2 4 PRO 4 628 628 PRO PRO C . n B 2 5 MET 5 629 629 MET MET C . n B 2 6 LEU 6 630 630 LEU LEU C . n B 2 7 MET 7 631 631 MET MET C . n B 2 8 ASN 8 632 632 ASN ASN C . n B 2 9 LEU 9 633 633 LEU LEU C . n B 2 10 LEU 10 634 634 LEU LEU C . n B 2 11 LYS 11 635 635 LYS LYS C . n B 2 12 ASP 12 636 ? ? ? C . n B 2 13 ASN 13 637 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VDX 1 500 500 VDX VDX A . D 4 HOH 1 1 1 HOH HOH A . D 4 HOH 2 2 2 HOH HOH A . D 4 HOH 3 3 3 HOH HOH A . D 4 HOH 4 4 4 HOH HOH A . D 4 HOH 5 5 5 HOH HOH A . D 4 HOH 6 6 6 HOH HOH A . D 4 HOH 7 7 7 HOH HOH A . D 4 HOH 8 8 8 HOH HOH A . D 4 HOH 9 9 9 HOH HOH A . D 4 HOH 10 10 10 HOH HOH A . D 4 HOH 11 11 11 HOH HOH A . D 4 HOH 12 12 12 HOH HOH A . D 4 HOH 13 13 13 HOH HOH A . D 4 HOH 14 14 14 HOH HOH A . D 4 HOH 15 15 15 HOH HOH A . D 4 HOH 16 16 16 HOH HOH A . D 4 HOH 17 17 17 HOH HOH A . D 4 HOH 18 18 18 HOH HOH A . D 4 HOH 19 19 19 HOH HOH A . D 4 HOH 20 20 20 HOH HOH A . D 4 HOH 21 21 21 HOH HOH A . D 4 HOH 22 22 22 HOH HOH A . D 4 HOH 23 23 23 HOH HOH A . D 4 HOH 24 24 24 HOH HOH A . D 4 HOH 25 25 25 HOH HOH A . D 4 HOH 26 26 26 HOH HOH A . D 4 HOH 27 27 27 HOH HOH A . D 4 HOH 28 28 28 HOH HOH A . D 4 HOH 29 29 29 HOH HOH A . D 4 HOH 30 30 30 HOH HOH A . D 4 HOH 31 31 31 HOH HOH A . D 4 HOH 32 32 32 HOH HOH A . D 4 HOH 33 33 33 HOH HOH A . D 4 HOH 34 34 34 HOH HOH A . D 4 HOH 35 35 35 HOH HOH A . D 4 HOH 36 37 37 HOH HOH A . D 4 HOH 37 38 38 HOH HOH A . D 4 HOH 38 39 39 HOH HOH A . D 4 HOH 39 40 40 HOH HOH A . D 4 HOH 40 41 41 HOH HOH A . D 4 HOH 41 42 42 HOH HOH A . D 4 HOH 42 43 43 HOH HOH A . D 4 HOH 43 44 44 HOH HOH A . D 4 HOH 44 45 45 HOH HOH A . D 4 HOH 45 46 46 HOH HOH A . D 4 HOH 46 47 47 HOH HOH A . D 4 HOH 47 48 48 HOH HOH A . D 4 HOH 48 49 49 HOH HOH A . D 4 HOH 49 50 50 HOH HOH A . D 4 HOH 50 51 51 HOH HOH A . D 4 HOH 51 52 52 HOH HOH A . D 4 HOH 52 53 53 HOH HOH A . D 4 HOH 53 54 54 HOH HOH A . D 4 HOH 54 57 57 HOH HOH A . D 4 HOH 55 58 58 HOH HOH A . D 4 HOH 56 59 59 HOH HOH A . D 4 HOH 57 60 60 HOH HOH A . D 4 HOH 58 61 61 HOH HOH A . D 4 HOH 59 62 62 HOH HOH A . D 4 HOH 60 63 63 HOH HOH A . D 4 HOH 61 64 64 HOH HOH A . D 4 HOH 62 65 65 HOH HOH A . D 4 HOH 63 66 66 HOH HOH A . D 4 HOH 64 67 67 HOH HOH A . D 4 HOH 65 68 68 HOH HOH A . D 4 HOH 66 69 69 HOH HOH A . D 4 HOH 67 70 70 HOH HOH A . D 4 HOH 68 71 71 HOH HOH A . D 4 HOH 69 72 72 HOH HOH A . D 4 HOH 70 73 73 HOH HOH A . D 4 HOH 71 74 74 HOH HOH A . D 4 HOH 72 75 75 HOH HOH A . D 4 HOH 73 76 76 HOH HOH A . D 4 HOH 74 77 77 HOH HOH A . D 4 HOH 75 78 78 HOH HOH A . D 4 HOH 76 79 79 HOH HOH A . D 4 HOH 77 80 80 HOH HOH A . D 4 HOH 78 81 81 HOH HOH A . D 4 HOH 79 82 82 HOH HOH A . D 4 HOH 80 83 83 HOH HOH A . D 4 HOH 81 84 84 HOH HOH A . D 4 HOH 82 85 85 HOH HOH A . D 4 HOH 83 86 86 HOH HOH A . D 4 HOH 84 87 87 HOH HOH A . D 4 HOH 85 88 88 HOH HOH A . D 4 HOH 86 89 89 HOH HOH A . D 4 HOH 87 90 90 HOH HOH A . D 4 HOH 88 91 91 HOH HOH A . D 4 HOH 89 92 92 HOH HOH A . E 4 HOH 1 36 36 HOH HOH C . E 4 HOH 2 55 55 HOH HOH C . E 4 HOH 3 56 56 HOH HOH C . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2120 ? 1 MORE -8 ? 1 'SSA (A^2)' 11750 ? 2 'ABSA (A^2)' 5810 ? 2 MORE -35 ? 2 'SSA (A^2)' 21920 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 154.7260000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-04-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 SAINT 'data reduction' . ? 2 LSCALE 'data scaling' . ? 3 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 228 ? ? CG A ASP 228 ? ? OD2 A ASP 228 ? ? 124.11 118.30 5.81 0.90 N 2 1 CB A ASP 292 ? ? CG A ASP 292 ? ? OD2 A ASP 292 ? ? 124.31 118.30 6.01 0.90 N 3 1 CB A ASP 338 ? ? CG A ASP 338 ? ? OD2 A ASP 338 ? ? 123.83 118.30 5.53 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 284 ? ? -102.84 41.66 2 1 TYR A 289 ? ? -110.38 50.29 3 1 GLN A 343 ? ? -90.15 -61.05 4 1 ASN C 626 ? ? 77.36 99.47 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 123 ? CB ? A LYS 8 CB 2 1 Y 1 A LYS 123 ? CG ? A LYS 8 CG 3 1 Y 1 A LYS 123 ? CD ? A LYS 8 CD 4 1 Y 1 A LYS 123 ? CE ? A LYS 8 CE 5 1 Y 1 A LYS 123 ? NZ ? A LYS 8 NZ 6 1 Y 1 A ARG 151 ? CG ? A ARG 36 CG 7 1 Y 1 A ARG 151 ? CD ? A ARG 36 CD 8 1 Y 1 A ARG 151 ? NE ? A ARG 36 NE 9 1 Y 1 A ARG 151 ? CZ ? A ARG 36 CZ 10 1 Y 1 A ARG 151 ? NH1 ? A ARG 36 NH1 11 1 Y 1 A ARG 151 ? NH2 ? A ARG 36 NH2 12 1 Y 1 A ARG 248 ? CG ? A ARG 86 CG 13 1 Y 1 A ARG 248 ? CD ? A ARG 86 CD 14 1 Y 1 A ARG 248 ? NE ? A ARG 86 NE 15 1 Y 1 A ARG 248 ? CZ ? A ARG 86 CZ 16 1 Y 1 A ARG 248 ? NH1 ? A ARG 86 NH1 17 1 Y 1 A ARG 248 ? NH2 ? A ARG 86 NH2 18 1 Y 1 A GLN 403 ? CG ? A GLN 241 CG 19 1 Y 1 A GLN 403 ? CD ? A GLN 241 CD 20 1 Y 1 A GLN 403 ? OE1 ? A GLN 241 OE1 21 1 Y 1 A GLN 403 ? NE2 ? A GLN 241 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 116 ? A LEU 1 2 1 Y 1 A LYS 117 ? A LYS 2 3 1 Y 1 A ASP 118 ? A ASP 3 4 1 Y 1 A SER 119 ? A SER 4 5 1 Y 1 A LEU 120 ? A LEU 5 6 1 Y 1 A ARG 121 ? A ARG 6 7 1 Y 1 A PRO 122 ? A PRO 7 8 1 Y 1 A ASP 160 ? A ASP 45 9 1 Y 1 A GLY 161 ? A GLY 46 10 1 Y 1 A SER 162 ? A SER 47 11 1 Y 1 A THR 163 ? A THR 48 12 1 Y 1 A GLY 164 ? A GLY 49 13 1 Y 1 A SER 212 ? A SER 50 14 1 Y 1 A VAL 213 ? A VAL 51 15 1 Y 1 A THR 214 ? A THR 52 16 1 Y 1 A LEU 215 ? A LEU 53 17 1 Y 1 A ASP 216 ? A ASP 54 18 1 Y 1 A LEU 217 ? A LEU 55 19 1 Y 1 A SER 218 ? A SER 56 20 1 Y 1 A GLU 421 ? A GLU 259 21 1 Y 1 A ILE 422 ? A ILE 260 22 1 Y 1 A SER 423 ? A SER 261 23 1 Y 1 A LEU 424 ? A LEU 262 24 1 Y 1 A VAL 425 ? A VAL 263 25 1 Y 1 A PRO 426 ? A PRO 264 26 1 Y 1 A ARG 427 ? A ARG 265 27 1 Y 1 A GLY 428 ? A GLY 266 28 1 Y 1 A SER 429 ? A SER 267 29 1 Y 1 A MET 430 ? A MET 268 30 1 Y 1 A ALA 431 ? A ALA 269 31 1 Y 1 A ILE 432 ? A ILE 270 32 1 Y 1 A SER 433 ? A SER 271 33 1 Y 1 A ASP 434 ? A ASP 272 34 1 Y 1 A PRO 435 ? A PRO 273 35 1 Y 1 A ASN 436 ? A ASN 274 36 1 Y 1 A SER 437 ? A SER 275 37 1 Y 1 A SER 438 ? A SER 276 38 1 Y 1 A SER 439 ? A SER 277 39 1 Y 1 A VAL 440 ? A VAL 278 40 1 Y 1 A ASP 441 ? A ASP 279 41 1 Y 1 A LYS 442 ? A LYS 280 42 1 Y 1 A LEU 443 ? A LEU 281 43 1 Y 1 A ALA 444 ? A ALA 282 44 1 Y 1 A ALA 445 ? A ALA 283 45 1 Y 1 A ALA 446 ? A ALA 284 46 1 Y 1 A LEU 447 ? A LEU 285 47 1 Y 1 A GLU 448 ? A GLU 286 48 1 Y 1 A HIS 449 ? A HIS 287 49 1 Y 1 A HIS 450 ? A HIS 288 50 1 Y 1 A HIS 451 ? A HIS 289 51 1 Y 1 A HIS 452 ? A HIS 290 52 1 Y 1 A HIS 453 ? A HIS 291 53 1 Y 1 A HIS 454 ? A HIS 292 54 1 Y 1 C ASP 636 ? B ASP 12 55 1 Y 1 C ASN 637 ? B ASN 13 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 VDX O2 O N N 391 VDX O3 O N N 392 VDX C1 C N S 393 VDX C2 C N N 394 VDX C3 C N R 395 VDX C4 C N N 396 VDX C5 C N N 397 VDX C6 C N N 398 VDX C7 C N N 399 VDX C8 C N N 400 VDX C9 C N N 401 VDX C10 C N N 402 VDX C11 C N N 403 VDX C12 C N N 404 VDX C13 C N R 405 VDX C14 C N S 406 VDX C15 C N N 407 VDX C16 C N N 408 VDX C17 C N R 409 VDX C18 C N N 410 VDX C19 C N N 411 VDX C20 C N R 412 VDX C21 C N N 413 VDX C22 C N N 414 VDX C23 C N N 415 VDX C24 C N N 416 VDX C25 C N N 417 VDX C26 C N N 418 VDX C27 C N N 419 VDX O1 O N N 420 VDX HO2 H N N 421 VDX HO3 H N N 422 VDX H11 H N N 423 VDX H21 H N N 424 VDX H22 H N N 425 VDX H31 H N N 426 VDX H41 H N N 427 VDX H42 H N N 428 VDX H61 H N N 429 VDX H71 H N N 430 VDX H91 H N N 431 VDX H92 H N N 432 VDX H111 H N N 433 VDX H112 H N N 434 VDX H121 H N N 435 VDX H122 H N N 436 VDX H141 H N N 437 VDX H151 H N N 438 VDX H152 H N N 439 VDX H161 H N N 440 VDX H162 H N N 441 VDX H171 H N N 442 VDX H181 H N N 443 VDX H182 H N N 444 VDX H183 H N N 445 VDX H191 H N N 446 VDX H192 H N N 447 VDX H201 H N N 448 VDX H211 H N N 449 VDX H212 H N N 450 VDX H213 H N N 451 VDX H221 H N N 452 VDX H222 H N N 453 VDX H231 H N N 454 VDX H232 H N N 455 VDX H241 H N N 456 VDX H242 H N N 457 VDX H261 H N N 458 VDX H262 H N N 459 VDX H263 H N N 460 VDX H271 H N N 461 VDX H272 H N N 462 VDX H273 H N N 463 VDX HO1 H N N 464 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 VDX O2 C3 sing N N 376 VDX O2 HO2 sing N N 377 VDX O3 C25 sing N N 378 VDX O3 HO3 sing N N 379 VDX C1 C2 sing N N 380 VDX C1 C10 sing N N 381 VDX C1 O1 sing N N 382 VDX C1 H11 sing N N 383 VDX C2 C3 sing N N 384 VDX C2 H21 sing N N 385 VDX C2 H22 sing N N 386 VDX C3 C4 sing N N 387 VDX C3 H31 sing N N 388 VDX C4 C5 sing N N 389 VDX C4 H41 sing N N 390 VDX C4 H42 sing N N 391 VDX C5 C6 doub N Z 392 VDX C5 C10 sing N N 393 VDX C6 C7 sing N N 394 VDX C6 H61 sing N N 395 VDX C7 C8 doub N E 396 VDX C7 H71 sing N N 397 VDX C8 C9 sing N N 398 VDX C8 C14 sing N N 399 VDX C9 C11 sing N N 400 VDX C9 H91 sing N N 401 VDX C9 H92 sing N N 402 VDX C10 C19 doub N N 403 VDX C11 C12 sing N N 404 VDX C11 H111 sing N N 405 VDX C11 H112 sing N N 406 VDX C12 C13 sing N N 407 VDX C12 H121 sing N N 408 VDX C12 H122 sing N N 409 VDX C13 C14 sing N N 410 VDX C13 C17 sing N N 411 VDX C13 C18 sing N N 412 VDX C14 C15 sing N N 413 VDX C14 H141 sing N N 414 VDX C15 C16 sing N N 415 VDX C15 H151 sing N N 416 VDX C15 H152 sing N N 417 VDX C16 C17 sing N N 418 VDX C16 H161 sing N N 419 VDX C16 H162 sing N N 420 VDX C17 C20 sing N N 421 VDX C17 H171 sing N N 422 VDX C18 H181 sing N N 423 VDX C18 H182 sing N N 424 VDX C18 H183 sing N N 425 VDX C19 H191 sing N N 426 VDX C19 H192 sing N N 427 VDX C20 C21 sing N N 428 VDX C20 C22 sing N N 429 VDX C20 H201 sing N N 430 VDX C21 H211 sing N N 431 VDX C21 H212 sing N N 432 VDX C21 H213 sing N N 433 VDX C22 C23 sing N N 434 VDX C22 H221 sing N N 435 VDX C22 H222 sing N N 436 VDX C23 C24 sing N N 437 VDX C23 H231 sing N N 438 VDX C23 H232 sing N N 439 VDX C24 C25 sing N N 440 VDX C24 H241 sing N N 441 VDX C24 H242 sing N N 442 VDX C25 C26 sing N N 443 VDX C25 C27 sing N N 444 VDX C26 H261 sing N N 445 VDX C26 H262 sing N N 446 VDX C26 H263 sing N N 447 VDX C27 H271 sing N N 448 VDX C27 H272 sing N N 449 VDX C27 H273 sing N N 450 VDX O1 HO1 sing N N 451 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL' VDX 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1RJK _pdbx_initial_refinement_model.details 'PDB entry 1RJK' #