data_1RLG # _entry.id 1RLG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RLG pdb_00001rlg 10.2210/pdb1rlg/pdb NDB PR0108 ? ? RCSB RCSB020861 ? ? WWPDB D_1000020861 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-01 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_detector 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_detector.detector' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'chirality error at CYT16' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RLG _pdbx_database_status.recvd_initial_deposition_date 2003-11-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Moore, T.' 1 'Zhang, Y.' 2 'Fenley, M.O.' 3 'Li, H.' 4 # _citation.id primary _citation.title 'Molecular Basis of Box C/D RNA-Protein Interactions; Cocrystal Structure of Archaeal L7Ae and a Box C/D RNA.' _citation.journal_abbrev STRUCTURE _citation.journal_volume 12 _citation.page_first 807 _citation.page_last 818 _citation.year 2004 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15130473 _citation.pdbx_database_id_DOI 10.1016/j.str.2004.02.033 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moore, T.' 1 ? primary 'Zhang, Y.' 2 ? primary 'Fenley, M.O.' 3 ? primary 'Li, H.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 25-MER 8329.573 2 ? ? ? ? 2 polymer man '50S ribosomal protein L7Ae' 13212.320 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes 'GC(5BU)C(5BU)GACCGAAAGGCGUGA(5BU)GAGC' GCUCUGACCGAAAGGCGUGAUGAGC C,D ? 2 'polypeptide(L)' no no ;MYVRFEVPEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKN DLGRAVGIEVPCASAAIINEGELRKELGSLVEKIKGLQK ; ;MYVRFEVPEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKN DLGRAVGIEVPCASAAIINEGELRKELGSLVEKIKGLQK ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 5BU n 1 4 C n 1 5 5BU n 1 6 G n 1 7 A n 1 8 C n 1 9 C n 1 10 G n 1 11 A n 1 12 A n 1 13 A n 1 14 G n 1 15 G n 1 16 C n 1 17 G n 1 18 U n 1 19 G n 1 20 A n 1 21 5BU n 1 22 G n 1 23 A n 1 24 G n 1 25 C n 2 1 MET n 2 2 TYR n 2 3 VAL n 2 4 ARG n 2 5 PHE n 2 6 GLU n 2 7 VAL n 2 8 PRO n 2 9 GLU n 2 10 ASP n 2 11 MET n 2 12 GLN n 2 13 ASN n 2 14 GLU n 2 15 ALA n 2 16 LEU n 2 17 SER n 2 18 LEU n 2 19 LEU n 2 20 GLU n 2 21 LYS n 2 22 VAL n 2 23 ARG n 2 24 GLU n 2 25 SER n 2 26 GLY n 2 27 LYS n 2 28 VAL n 2 29 LYS n 2 30 LYS n 2 31 GLY n 2 32 THR n 2 33 ASN n 2 34 GLU n 2 35 THR n 2 36 THR n 2 37 LYS n 2 38 ALA n 2 39 VAL n 2 40 GLU n 2 41 ARG n 2 42 GLY n 2 43 LEU n 2 44 ALA n 2 45 LYS n 2 46 LEU n 2 47 VAL n 2 48 TYR n 2 49 ILE n 2 50 ALA n 2 51 GLU n 2 52 ASP n 2 53 VAL n 2 54 ASP n 2 55 PRO n 2 56 PRO n 2 57 GLU n 2 58 ILE n 2 59 VAL n 2 60 ALA n 2 61 HIS n 2 62 LEU n 2 63 PRO n 2 64 LEU n 2 65 LEU n 2 66 CYS n 2 67 GLU n 2 68 GLU n 2 69 LYS n 2 70 ASN n 2 71 VAL n 2 72 PRO n 2 73 TYR n 2 74 ILE n 2 75 TYR n 2 76 VAL n 2 77 LYS n 2 78 SER n 2 79 LYS n 2 80 ASN n 2 81 ASP n 2 82 LEU n 2 83 GLY n 2 84 ARG n 2 85 ALA n 2 86 VAL n 2 87 GLY n 2 88 ILE n 2 89 GLU n 2 90 VAL n 2 91 PRO n 2 92 CYS n 2 93 ALA n 2 94 SER n 2 95 ALA n 2 96 ALA n 2 97 ILE n 2 98 ILE n 2 99 ASN n 2 100 GLU n 2 101 GLY n 2 102 GLU n 2 103 LEU n 2 104 ARG n 2 105 LYS n 2 106 GLU n 2 107 LEU n 2 108 GLY n 2 109 SER n 2 110 LEU n 2 111 VAL n 2 112 GLU n 2 113 LYS n 2 114 ILE n 2 115 LYS n 2 116 GLY n 2 117 LEU n 2 118 GLN n 2 119 LYS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Archaeoglobus _entity_src_gen.pdbx_gene_src_gene 'RPL7AE, AF0764' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2234 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET13 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5BU 'RNA linking' n "5-BROMO-URIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O9 P' 403.077 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA C . n A 1 2 C 2 2 2 C CYT C . n A 1 3 5BU 3 3 3 5BU URI C . n A 1 4 C 4 4 4 C CYT C . n A 1 5 5BU 5 5 5 5BU URI C . n A 1 6 G 6 6 6 G GUA C . n A 1 7 A 7 7 7 A ADE C . n A 1 8 C 8 8 8 C CYT C . n A 1 9 C 9 9 9 C CYT C . n A 1 10 G 10 10 10 G GUA C . n A 1 11 A 11 11 11 A ADE C . n A 1 12 A 12 12 12 A ADE C . n A 1 13 A 13 13 13 A ADE C . n A 1 14 G 14 14 14 G GUA C . n A 1 15 G 15 15 15 G GUA C . n A 1 16 C 16 16 16 C CYT C . n A 1 17 G 17 17 17 G GUA C . n A 1 18 U 18 18 18 U URI C . n A 1 19 G 19 19 19 G GUA C . n A 1 20 A 20 20 20 A ADE C . n A 1 21 5BU 21 21 21 5BU URI C . n A 1 22 G 22 22 22 G GUA C . n A 1 23 A 23 23 23 A ADE C . n A 1 24 G 24 24 24 G GUA C . n A 1 25 C 25 25 25 C CYT C . n B 1 1 G 1 1 1 G GUA D . n B 1 2 C 2 2 2 C CYT D . n B 1 3 5BU 3 3 3 5BU URI D . n B 1 4 C 4 4 4 C CYT D . n B 1 5 5BU 5 5 5 5BU URI D . n B 1 6 G 6 6 6 G GUA D . n B 1 7 A 7 7 7 A ADE D . n B 1 8 C 8 8 8 C CYT D . n B 1 9 C 9 9 9 C CYT D . n B 1 10 G 10 10 10 G GUA D . n B 1 11 A 11 11 11 A ADE D . n B 1 12 A 12 12 12 A ADE D . n B 1 13 A 13 13 13 A ADE D . n B 1 14 G 14 14 14 G GUA D . n B 1 15 G 15 15 15 G GUA D . n B 1 16 C 16 16 16 C CYT D . n B 1 17 G 17 17 17 G GUA D . n B 1 18 U 18 18 18 U URI D . n B 1 19 G 19 19 19 G GUA D . n B 1 20 A 20 20 20 A ADE D . n B 1 21 5BU 21 21 21 5BU URI D . n B 1 22 G 22 22 22 G GUA D . n B 1 23 A 23 23 23 A ADE D . n B 1 24 G 24 24 24 G GUA D . n B 1 25 C 25 25 25 C CYT D . n C 2 1 MET 1 1 ? ? ? A . n C 2 2 TYR 2 2 ? ? ? A . n C 2 3 VAL 3 3 ? ? ? A . n C 2 4 ARG 4 4 ? ? ? A . n C 2 5 PHE 5 5 ? ? ? A . n C 2 6 GLU 6 6 ? ? ? A . n C 2 7 VAL 7 7 7 VAL VAL A . n C 2 8 PRO 8 8 8 PRO PRO A . n C 2 9 GLU 9 9 9 GLU GLU A . n C 2 10 ASP 10 10 10 ASP ASP A . n C 2 11 MET 11 11 11 MET MET A . n C 2 12 GLN 12 12 12 GLN GLN A . n C 2 13 ASN 13 13 13 ASN ASN A . n C 2 14 GLU 14 14 14 GLU GLU A . n C 2 15 ALA 15 15 15 ALA ALA A . n C 2 16 LEU 16 16 16 LEU LEU A . n C 2 17 SER 17 17 17 SER SER A . n C 2 18 LEU 18 18 18 LEU LEU A . n C 2 19 LEU 19 19 19 LEU LEU A . n C 2 20 GLU 20 20 20 GLU GLU A . n C 2 21 LYS 21 21 21 LYS LYS A . n C 2 22 VAL 22 22 22 VAL VAL A . n C 2 23 ARG 23 23 23 ARG ARG A . n C 2 24 GLU 24 24 24 GLU GLU A . n C 2 25 SER 25 25 25 SER SER A . n C 2 26 GLY 26 26 26 GLY GLY A . n C 2 27 LYS 27 27 27 LYS LYS A . n C 2 28 VAL 28 28 28 VAL VAL A . n C 2 29 LYS 29 29 29 LYS LYS A . n C 2 30 LYS 30 30 30 LYS LYS A . n C 2 31 GLY 31 31 31 GLY GLY A . n C 2 32 THR 32 32 32 THR THR A . n C 2 33 ASN 33 33 33 ASN ASN A . n C 2 34 GLU 34 34 34 GLU GLU A . n C 2 35 THR 35 35 35 THR THR A . n C 2 36 THR 36 36 36 THR THR A . n C 2 37 LYS 37 37 37 LYS LYS A . n C 2 38 ALA 38 38 38 ALA ALA A . n C 2 39 VAL 39 39 39 VAL VAL A . n C 2 40 GLU 40 40 40 GLU GLU A . n C 2 41 ARG 41 41 41 ARG ARG A . n C 2 42 GLY 42 42 42 GLY GLY A . n C 2 43 LEU 43 43 43 LEU LEU A . n C 2 44 ALA 44 44 44 ALA ALA A . n C 2 45 LYS 45 45 45 LYS LYS A . n C 2 46 LEU 46 46 46 LEU LEU A . n C 2 47 VAL 47 47 47 VAL VAL A . n C 2 48 TYR 48 48 48 TYR TYR A . n C 2 49 ILE 49 49 49 ILE ILE A . n C 2 50 ALA 50 50 50 ALA ALA A . n C 2 51 GLU 51 51 51 GLU GLU A . n C 2 52 ASP 52 52 52 ASP ASP A . n C 2 53 VAL 53 53 53 VAL VAL A . n C 2 54 ASP 54 54 54 ASP ASP A . n C 2 55 PRO 55 55 55 PRO PRO A . n C 2 56 PRO 56 56 56 PRO PRO A . n C 2 57 GLU 57 57 57 GLU GLU A . n C 2 58 ILE 58 58 58 ILE ILE A . n C 2 59 VAL 59 59 59 VAL VAL A . n C 2 60 ALA 60 60 60 ALA ALA A . n C 2 61 HIS 61 61 61 HIS HIS A . n C 2 62 LEU 62 62 62 LEU LEU A . n C 2 63 PRO 63 63 63 PRO PRO A . n C 2 64 LEU 64 64 64 LEU LEU A . n C 2 65 LEU 65 65 65 LEU LEU A . n C 2 66 CYS 66 66 66 CYS CYS A . n C 2 67 GLU 67 67 67 GLU GLU A . n C 2 68 GLU 68 68 68 GLU GLU A . n C 2 69 LYS 69 69 69 LYS LYS A . n C 2 70 ASN 70 70 70 ASN ASN A . n C 2 71 VAL 71 71 71 VAL VAL A . n C 2 72 PRO 72 72 72 PRO PRO A . n C 2 73 TYR 73 73 73 TYR TYR A . n C 2 74 ILE 74 74 74 ILE ILE A . n C 2 75 TYR 75 75 75 TYR TYR A . n C 2 76 VAL 76 76 76 VAL VAL A . n C 2 77 LYS 77 77 77 LYS LYS A . n C 2 78 SER 78 78 78 SER SER A . n C 2 79 LYS 79 79 79 LYS LYS A . n C 2 80 ASN 80 80 80 ASN ASN A . n C 2 81 ASP 81 81 81 ASP ASP A . n C 2 82 LEU 82 82 82 LEU LEU A . n C 2 83 GLY 83 83 83 GLY GLY A . n C 2 84 ARG 84 84 84 ARG ARG A . n C 2 85 ALA 85 85 85 ALA ALA A . n C 2 86 VAL 86 86 86 VAL VAL A . n C 2 87 GLY 87 87 87 GLY GLY A . n C 2 88 ILE 88 88 88 ILE ILE A . n C 2 89 GLU 89 89 89 GLU GLU A . n C 2 90 VAL 90 90 90 VAL VAL A . n C 2 91 PRO 91 91 91 PRO PRO A . n C 2 92 CYS 92 92 92 CYS CYS A . n C 2 93 ALA 93 93 93 ALA ALA A . n C 2 94 SER 94 94 94 SER SER A . n C 2 95 ALA 95 95 95 ALA ALA A . n C 2 96 ALA 96 96 96 ALA ALA A . n C 2 97 ILE 97 97 97 ILE ILE A . n C 2 98 ILE 98 98 98 ILE ILE A . n C 2 99 ASN 99 99 99 ASN ASN A . n C 2 100 GLU 100 100 100 GLU GLU A . n C 2 101 GLY 101 101 101 GLY GLY A . n C 2 102 GLU 102 102 102 GLU GLU A . n C 2 103 LEU 103 103 103 LEU LEU A . n C 2 104 ARG 104 104 104 ARG ARG A . n C 2 105 LYS 105 105 105 LYS LYS A . n C 2 106 GLU 106 106 106 GLU GLU A . n C 2 107 LEU 107 107 107 LEU LEU A . n C 2 108 GLY 108 108 108 GLY GLY A . n C 2 109 SER 109 109 109 SER SER A . n C 2 110 LEU 110 110 110 LEU LEU A . n C 2 111 VAL 111 111 111 VAL VAL A . n C 2 112 GLU 112 112 112 GLU GLU A . n C 2 113 LYS 113 113 113 LYS LYS A . n C 2 114 ILE 114 114 114 ILE ILE A . n C 2 115 LYS 115 115 115 LYS LYS A . n C 2 116 GLY 116 116 116 GLY GLY A . n C 2 117 LEU 117 117 117 LEU LEU A . n C 2 118 GLN 118 118 118 GLN GLN A . n C 2 119 LYS 119 119 119 LYS LYS A . n D 2 1 MET 1 1 ? ? ? B . n D 2 2 TYR 2 2 2 TYR TYR B . n D 2 3 VAL 3 3 3 VAL VAL B . n D 2 4 ARG 4 4 4 ARG ARG B . n D 2 5 PHE 5 5 5 PHE PHE B . n D 2 6 GLU 6 6 6 GLU GLU B . n D 2 7 VAL 7 7 7 VAL VAL B . n D 2 8 PRO 8 8 8 PRO PRO B . n D 2 9 GLU 9 9 9 GLU GLU B . n D 2 10 ASP 10 10 10 ASP ASP B . n D 2 11 MET 11 11 11 MET MET B . n D 2 12 GLN 12 12 12 GLN GLN B . n D 2 13 ASN 13 13 13 ASN ASN B . n D 2 14 GLU 14 14 14 GLU GLU B . n D 2 15 ALA 15 15 15 ALA ALA B . n D 2 16 LEU 16 16 16 LEU LEU B . n D 2 17 SER 17 17 17 SER SER B . n D 2 18 LEU 18 18 18 LEU LEU B . n D 2 19 LEU 19 19 19 LEU LEU B . n D 2 20 GLU 20 20 20 GLU GLU B . n D 2 21 LYS 21 21 21 LYS LYS B . n D 2 22 VAL 22 22 22 VAL VAL B . n D 2 23 ARG 23 23 23 ARG ARG B . n D 2 24 GLU 24 24 24 GLU GLU B . n D 2 25 SER 25 25 25 SER SER B . n D 2 26 GLY 26 26 26 GLY GLY B . n D 2 27 LYS 27 27 27 LYS LYS B . n D 2 28 VAL 28 28 28 VAL VAL B . n D 2 29 LYS 29 29 29 LYS LYS B . n D 2 30 LYS 30 30 30 LYS LYS B . n D 2 31 GLY 31 31 31 GLY GLY B . n D 2 32 THR 32 32 32 THR THR B . n D 2 33 ASN 33 33 33 ASN ASN B . n D 2 34 GLU 34 34 34 GLU GLU B . n D 2 35 THR 35 35 35 THR THR B . n D 2 36 THR 36 36 36 THR THR B . n D 2 37 LYS 37 37 37 LYS LYS B . n D 2 38 ALA 38 38 38 ALA ALA B . n D 2 39 VAL 39 39 39 VAL VAL B . n D 2 40 GLU 40 40 40 GLU GLU B . n D 2 41 ARG 41 41 41 ARG ARG B . n D 2 42 GLY 42 42 42 GLY GLY B . n D 2 43 LEU 43 43 43 LEU LEU B . n D 2 44 ALA 44 44 44 ALA ALA B . n D 2 45 LYS 45 45 45 LYS LYS B . n D 2 46 LEU 46 46 46 LEU LEU B . n D 2 47 VAL 47 47 47 VAL VAL B . n D 2 48 TYR 48 48 48 TYR TYR B . n D 2 49 ILE 49 49 49 ILE ILE B . n D 2 50 ALA 50 50 50 ALA ALA B . n D 2 51 GLU 51 51 51 GLU GLU B . n D 2 52 ASP 52 52 52 ASP ASP B . n D 2 53 VAL 53 53 53 VAL VAL B . n D 2 54 ASP 54 54 54 ASP ASP B . n D 2 55 PRO 55 55 55 PRO PRO B . n D 2 56 PRO 56 56 56 PRO PRO B . n D 2 57 GLU 57 57 57 GLU GLU B . n D 2 58 ILE 58 58 58 ILE ILE B . n D 2 59 VAL 59 59 59 VAL VAL B . n D 2 60 ALA 60 60 60 ALA ALA B . n D 2 61 HIS 61 61 61 HIS HIS B . n D 2 62 LEU 62 62 62 LEU LEU B . n D 2 63 PRO 63 63 63 PRO PRO B . n D 2 64 LEU 64 64 64 LEU LEU B . n D 2 65 LEU 65 65 65 LEU LEU B . n D 2 66 CYS 66 66 66 CYS CYS B . n D 2 67 GLU 67 67 67 GLU GLU B . n D 2 68 GLU 68 68 68 GLU GLU B . n D 2 69 LYS 69 69 69 LYS LYS B . n D 2 70 ASN 70 70 70 ASN ASN B . n D 2 71 VAL 71 71 71 VAL VAL B . n D 2 72 PRO 72 72 72 PRO PRO B . n D 2 73 TYR 73 73 73 TYR TYR B . n D 2 74 ILE 74 74 74 ILE ILE B . n D 2 75 TYR 75 75 75 TYR TYR B . n D 2 76 VAL 76 76 76 VAL VAL B . n D 2 77 LYS 77 77 77 LYS LYS B . n D 2 78 SER 78 78 78 SER SER B . n D 2 79 LYS 79 79 79 LYS LYS B . n D 2 80 ASN 80 80 80 ASN ASN B . n D 2 81 ASP 81 81 81 ASP ASP B . n D 2 82 LEU 82 82 82 LEU LEU B . n D 2 83 GLY 83 83 83 GLY GLY B . n D 2 84 ARG 84 84 84 ARG ARG B . n D 2 85 ALA 85 85 85 ALA ALA B . n D 2 86 VAL 86 86 86 VAL VAL B . n D 2 87 GLY 87 87 87 GLY GLY B . n D 2 88 ILE 88 88 88 ILE ILE B . n D 2 89 GLU 89 89 89 GLU GLU B . n D 2 90 VAL 90 90 90 VAL VAL B . n D 2 91 PRO 91 91 91 PRO PRO B . n D 2 92 CYS 92 92 92 CYS CYS B . n D 2 93 ALA 93 93 93 ALA ALA B . n D 2 94 SER 94 94 94 SER SER B . n D 2 95 ALA 95 95 95 ALA ALA B . n D 2 96 ALA 96 96 96 ALA ALA B . n D 2 97 ILE 97 97 97 ILE ILE B . n D 2 98 ILE 98 98 98 ILE ILE B . n D 2 99 ASN 99 99 99 ASN ASN B . n D 2 100 GLU 100 100 100 GLU GLU B . n D 2 101 GLY 101 101 101 GLY GLY B . n D 2 102 GLU 102 102 102 GLU GLU B . n D 2 103 LEU 103 103 103 LEU LEU B . n D 2 104 ARG 104 104 104 ARG ARG B . n D 2 105 LYS 105 105 105 LYS LYS B . n D 2 106 GLU 106 106 106 GLU GLU B . n D 2 107 LEU 107 107 107 LEU LEU B . n D 2 108 GLY 108 108 108 GLY GLY B . n D 2 109 SER 109 109 109 SER SER B . n D 2 110 LEU 110 110 110 LEU LEU B . n D 2 111 VAL 111 111 111 VAL VAL B . n D 2 112 GLU 112 112 112 GLU GLU B . n D 2 113 LYS 113 113 113 LYS LYS B . n D 2 114 ILE 114 114 114 ILE ILE B . n D 2 115 LYS 115 115 115 LYS LYS B . n D 2 116 GLY 116 116 116 GLY GLY B . n D 2 117 LEU 117 117 117 LEU LEU B . n D 2 118 GLN 118 118 118 GLN GLN B . n D 2 119 LYS 119 119 ? ? ? B . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1RLG _cell.length_a 120.584 _cell.length_b 120.584 _cell.length_c 120.584 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RLG _symmetry.space_group_name_H-M 'P 2 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 195 # _exptl.entry_id 1RLG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 66.12 _exptl_crystal.description ? _exptl_crystal.density_Matthews 3.66 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 400,magnesium acetate, HEPES , pH 7.5, EVAPORATION, temperature 303K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 'magnesium acetate' ? ? ? 1 3 1 HEPES ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 400' ? ? ? 1 6 2 'magnesium acetate' ? ? ? 1 7 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 263 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type FUJI _diffrn_detector.pdbx_collection_date 2003-04-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.99 1.0 2 1.09 1.0 3 0.97 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.99, 1.09, 0.97' # _reflns.entry_id 1RLG _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 29.25 _reflns.d_resolution_high 2.7 _reflns.number_obs 30750 _reflns.number_all ? _reflns.percent_possible_obs 0.94 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 80.7 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.71 _reflns_shell.percent_possible_all 54 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RLG _refine.ls_number_reflns_obs 28953 _refine.ls_number_reflns_all 30802 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 324127.19 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF 324127.19 _refine.ls_d_res_low 29.25 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 94.0 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all 0.235 _refine.ls_R_factor_R_work 0.235 _refine.ls_R_factor_R_free 0.26 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.3 _refine.ls_number_reflns_R_free 2706 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 61.9 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.290896 _refine.solvent_model_param_bsol 33.1653 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RLG _refine_analyze.Luzzati_coordinate_error_obs 0.41 _refine_analyze.Luzzati_sigma_a_obs 0.51 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.47 _refine_analyze.Luzzati_sigma_a_free 0.54 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1774 _refine_hist.pdbx_number_atoms_nucleic_acid 1078 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2852 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 29.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.78 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.87 _refine_ls_shell.number_reflns_R_work 3738 _refine_ls_shell.R_factor_R_work 0.379 _refine_ls_shell.percent_reflns_obs 78.8 _refine_ls_shell.R_factor_R_free 0.396 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 8.5 _refine_ls_shell.number_reflns_R_free 348 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1RLG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1RLG _struct.title 'Molecular basis of Box C/D RNA-protein interaction: co-crystal structure of the Archaeal sRNP intiation complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RLG _struct_keywords.pdbx_keywords 'Structural Protein/RNA' _struct_keywords.text 'PROTEIN-RNA, Structural Protein-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RL7A_ARCFU O29494 2 ;MYVRFEVPEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKN DLGRAVGIEVPCASAAIINEGELRKELGSLVEKIKGLQK ; 1 ? 2 PDB 1RLG 1RLG 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RLG A 1 ? 119 ? O29494 1 ? 119 ? 1 119 2 1 1RLG B 1 ? 119 ? O29494 1 ? 119 ? 1 119 3 2 1RLG C 1 ? 25 ? 1RLG 1 ? 25 ? 1 25 4 2 1RLG D 1 ? 25 ? 1RLG 1 ? 25 ? 1 25 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 ;The biological assembly is packed by a dimmer in the asymmetric unit by the operations of space group P23 ; ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU C 9 ? GLY C 26 ? GLU A 9 GLY A 26 1 ? 18 HELX_P HELX_P2 2 GLY C 31 ? GLU C 40 ? GLY A 31 GLU A 40 1 ? 10 HELX_P HELX_P3 3 HIS C 61 ? LYS C 69 ? HIS A 61 LYS A 69 1 ? 9 HELX_P HELX_P4 4 SER C 78 ? VAL C 86 ? SER A 78 VAL A 86 1 ? 9 HELX_P HELX_P5 5 GLU C 100 ? GLU C 102 ? GLU A 100 GLU A 102 5 ? 3 HELX_P HELX_P6 6 LEU C 103 ? GLY C 116 ? LEU A 103 GLY A 116 1 ? 14 HELX_P HELX_P7 7 PRO D 8 ? GLY D 26 ? PRO B 8 GLY B 26 1 ? 19 HELX_P HELX_P8 8 GLY D 31 ? ARG D 41 ? GLY B 31 ARG B 41 1 ? 11 HELX_P HELX_P9 9 HIS D 61 ? CYS D 66 ? HIS B 61 CYS B 66 1 ? 6 HELX_P HELX_P10 10 SER D 78 ? GLY D 87 ? SER B 78 GLY B 87 1 ? 10 HELX_P HELX_P11 11 LEU D 103 ? LEU D 117 ? LEU B 103 LEU B 117 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 2 "O3'" ? ? ? 1_555 A 5BU 3 P ? ? C C 2 C 5BU 3 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? A 5BU 3 "O3'" ? ? ? 1_555 A C 4 P ? ? C 5BU 3 C C 4 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? A C 4 "O3'" ? ? ? 1_555 A 5BU 5 P ? ? C C 4 C 5BU 5 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale4 covale both ? A 5BU 5 "O3'" ? ? ? 1_555 A G 6 P ? ? C 5BU 5 C G 6 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale5 covale both ? A A 20 "O3'" ? ? ? 1_555 A 5BU 21 P ? ? C A 20 C 5BU 21 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale6 covale both ? A 5BU 21 "O3'" ? ? ? 1_555 A G 22 P ? ? C 5BU 21 C G 22 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale7 covale both ? B C 2 "O3'" ? ? ? 1_555 B 5BU 3 P ? ? D C 2 D 5BU 3 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale8 covale both ? B 5BU 3 "O3'" ? ? ? 1_555 B C 4 P ? ? D 5BU 3 D C 4 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale9 covale both ? B C 4 "O3'" ? ? ? 1_555 B 5BU 5 P ? ? D C 4 D 5BU 5 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale10 covale both ? B 5BU 5 "O3'" ? ? ? 1_555 B G 6 P ? ? D 5BU 5 D G 6 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale11 covale both ? B A 20 "O3'" ? ? ? 1_555 B 5BU 21 P ? ? D A 20 D 5BU 21 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale12 covale both ? B 5BU 21 "O3'" ? ? ? 1_555 B G 22 P ? ? D 5BU 21 D G 22 1_555 ? ? ? ? ? ? ? 1.610 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 25 N3 ? ? C G 1 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 25 O2 ? ? C G 1 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 25 N4 ? ? C G 1 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 24 N1 ? ? C C 2 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 24 O6 ? ? C C 2 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 24 N2 ? ? C C 2 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A 5BU 3 O4 ? ? ? 1_555 A A 23 N6 ? ? C 5BU 3 C A 23 1_555 ? ? ? ? ? ? '5BU-A PAIR' ? ? ? hydrog8 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 22 N1 ? ? C C 4 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 22 O6 ? ? C C 4 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 22 N2 ? ? C C 4 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 5BU 5 N3 ? ? ? 1_555 A 5BU 21 O4 ? ? C 5BU 5 C 5BU 21 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog12 hydrog ? ? A 5BU 5 O2 ? ? ? 1_555 A 5BU 21 N3 ? ? C 5BU 5 C 5BU 21 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog13 hydrog ? ? A G 6 N2 ? ? ? 1_555 A A 20 N7 ? ? C G 6 C A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A G 6 N3 ? ? ? 1_555 A A 20 N6 ? ? C G 6 C A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog15 hydrog ? ? A A 7 N6 ? ? ? 1_555 A G 19 N3 ? ? C A 7 C G 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog16 hydrog ? ? A A 7 N7 ? ? ? 1_555 A G 19 N2 ? ? C A 7 C G 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog17 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 15 N1 ? ? C C 8 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 15 O6 ? ? C C 8 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 15 N2 ? ? C C 8 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 14 N1 ? ? C C 9 C G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 14 O6 ? ? C C 9 C G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 14 N2 ? ? C C 9 C G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 10 N2 ? ? ? 1_555 A A 13 N7 ? ? C G 10 C A 13 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog24 hydrog ? ? A C 16 O2 ? ? ? 1_555 A G 17 N2 ? ? C C 16 C G 17 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog25 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 25 N3 ? ? D G 1 D C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 25 O2 ? ? D G 1 D C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 25 N4 ? ? D G 1 D C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 24 N1 ? ? D C 2 D G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 24 O6 ? ? D C 2 D G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 24 N2 ? ? D C 2 D G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B 5BU 3 O4 ? ? ? 1_555 B A 23 N6 ? ? D 5BU 3 D A 23 1_555 ? ? ? ? ? ? '5BU-A PAIR' ? ? ? hydrog32 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 22 N1 ? ? D C 4 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 22 O6 ? ? D C 4 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 22 N2 ? ? D C 4 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B 5BU 5 N3 ? ? ? 1_555 B 5BU 21 O4 ? ? D 5BU 5 D 5BU 21 1_555 ? ? ? ? ? ? '5BU-5BU MISPAIR' ? ? ? hydrog36 hydrog ? ? B G 6 N2 ? ? ? 1_555 B A 20 N7 ? ? D G 6 D A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog37 hydrog ? ? B G 6 N3 ? ? ? 1_555 B A 20 N6 ? ? D G 6 D A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog38 hydrog ? ? B A 7 N6 ? ? ? 1_555 B G 19 N3 ? ? D A 7 D G 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog39 hydrog ? ? B A 7 N7 ? ? ? 1_555 B G 19 N2 ? ? D A 7 D G 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog40 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 15 N1 ? ? D C 8 D G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 15 O6 ? ? D C 8 D G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 15 N2 ? ? D C 8 D G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B C 9 N3 ? ? ? 1_555 B G 14 N1 ? ? D C 9 D G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 14 O6 ? ? D C 9 D G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 14 N2 ? ? D C 9 D G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 10 N2 ? ? ? 1_555 B A 13 N7 ? ? D G 10 D A 13 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog47 hydrog ? ? B C 16 O2 ? ? ? 1_555 B G 17 N2 ? ? D C 16 D G 17 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 54 C . ? ASP 54 A PRO 55 C ? PRO 55 A 1 3.31 2 PRO 55 C . ? PRO 55 A PRO 56 C ? PRO 56 A 1 4.81 3 ASP 54 D . ? ASP 54 B PRO 55 D ? PRO 55 B 1 -0.20 4 PRO 55 D . ? PRO 55 B PRO 56 D ? PRO 56 B 1 4.40 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS C 27 ? LYS C 30 ? LYS A 27 LYS A 30 A 2 SER C 94 ? ASN C 99 ? SER A 94 ASN A 99 A 3 LEU C 46 ? ALA C 50 ? LEU A 46 ALA A 50 A 4 TYR C 73 ? VAL C 76 ? TYR A 73 VAL A 76 B 1 LYS D 27 ? LYS D 30 ? LYS B 27 LYS B 30 B 2 SER D 94 ? ASN D 99 ? SER B 94 ASN B 99 B 3 LEU D 46 ? ALA D 50 ? LEU B 46 ALA B 50 B 4 TYR D 73 ? VAL D 76 ? TYR B 73 VAL B 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS C 29 ? N LYS A 29 O ALA C 96 ? O ALA A 96 A 2 3 O ALA C 95 ? O ALA A 95 N TYR C 48 ? N TYR A 48 A 3 4 N ILE C 49 ? N ILE A 49 O VAL C 76 ? O VAL A 76 B 1 2 N LYS D 29 ? N LYS B 29 O ALA D 96 ? O ALA B 96 B 2 3 O ALA D 95 ? O ALA B 95 N TYR D 48 ? N TYR B 48 B 3 4 N ILE D 49 ? N ILE B 49 O VAL D 76 ? O VAL B 76 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 C _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 PRO _pdbx_validate_close_contact.auth_seq_id_1 55 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CD _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 PRO _pdbx_validate_close_contact.auth_seq_id_2 56 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.80 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C2'" C A 7 ? ? "C3'" C A 7 ? ? "O3'" C A 7 ? ? 129.11 113.70 15.41 1.60 N 2 1 "C2'" C C 16 ? ? "C3'" C C 16 ? ? "O3'" C C 16 ? ? 124.51 113.70 10.81 1.60 N 3 1 N9 C G 17 ? ? "C1'" C G 17 ? ? "C2'" C G 17 ? ? 123.00 114.00 9.00 1.30 N 4 1 "C2'" C U 18 ? ? "C3'" C U 18 ? ? "O3'" C U 18 ? ? 128.74 113.70 15.04 1.60 N 5 1 "C2'" D A 7 ? ? "C3'" D A 7 ? ? "O3'" D A 7 ? ? 128.28 113.70 14.58 1.60 N 6 1 "C2'" D C 16 ? ? "C3'" D C 16 ? ? "O3'" D C 16 ? ? 126.87 113.70 13.17 1.60 N 7 1 "C2'" D G 17 ? ? "C3'" D G 17 ? ? "O3'" D G 17 ? ? 126.86 113.70 13.16 1.60 N 8 1 "C2'" D U 18 ? ? "C3'" D U 18 ? ? "O3'" D U 18 ? ? 127.79 113.70 14.09 1.60 N 9 1 N A ASP 54 ? ? CA A ASP 54 ? ? C A ASP 54 ? ? 133.76 111.00 22.76 2.70 N 10 1 C A ASP 54 ? ? N A PRO 55 ? ? CA A PRO 55 ? ? 148.22 127.00 21.22 2.40 Y 11 1 C A ASP 54 ? ? N A PRO 55 ? ? CD A PRO 55 ? ? 98.67 120.60 -21.93 2.20 Y 12 1 C A PRO 55 ? ? N A PRO 56 ? ? CA A PRO 56 ? ? 153.03 127.00 26.03 2.40 Y 13 1 C A PRO 55 ? ? N A PRO 56 ? ? CD A PRO 56 ? ? 80.81 120.60 -39.79 2.20 Y 14 1 C B PRO 55 ? ? N B PRO 56 ? ? CA B PRO 56 ? ? 159.21 127.00 32.21 2.40 Y 15 1 C B PRO 55 ? ? N B PRO 56 ? ? CD B PRO 56 ? ? 79.19 120.60 -41.41 2.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 55 ? ? 29.05 130.33 2 1 PRO A 56 ? ? 81.37 -80.39 3 1 GLU A 57 ? ? -57.75 -9.25 4 1 LYS A 77 ? ? -52.26 -74.89 5 1 ARG A 104 ? ? -27.06 -70.77 6 1 PHE B 5 ? ? 176.81 137.73 7 1 GLU B 24 ? ? -98.30 -68.62 8 1 ASP B 52 ? ? -77.48 32.81 9 1 PRO B 55 ? ? -43.61 -176.41 10 1 PRO B 56 ? ? 82.49 -95.86 11 1 GLU B 68 ? ? -151.42 -46.49 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C3'" ? C C 16 ? 'WRONG HAND' . 2 1 "C3'" ? C U 18 ? PLANAR . 3 1 "C3'" ? D C 16 ? 'WRONG HAND' . # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id G _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 6 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.052 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5BU 3 C 5BU 3 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" 2 A 5BU 5 C 5BU 5 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" 3 A 5BU 21 C 5BU 21 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" 4 B 5BU 3 D 5BU 3 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" 5 B 5BU 5 D 5BU 5 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" 6 B 5BU 21 D 5BU 21 ? U "5-BROMO-URIDINE-5'-MONOPHOSPHATE" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? C MET 1 2 1 Y 1 A TYR 2 ? C TYR 2 3 1 Y 1 A VAL 3 ? C VAL 3 4 1 Y 1 A ARG 4 ? C ARG 4 5 1 Y 1 A PHE 5 ? C PHE 5 6 1 Y 1 A GLU 6 ? C GLU 6 7 1 Y 1 B MET 1 ? D MET 1 8 1 Y 1 B LYS 119 ? D LYS 119 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5BU P P N N 1 5BU OP1 O N N 2 5BU OP2 O N N 3 5BU OP3 O N N 4 5BU "O5'" O N N 5 5BU "C5'" C N N 6 5BU "C4'" C N R 7 5BU "O4'" O N N 8 5BU "C3'" C N S 9 5BU "O3'" O N N 10 5BU "C2'" C N R 11 5BU "O2'" O N N 12 5BU "C1'" C N R 13 5BU N1 N N N 14 5BU C2 C N N 15 5BU O2 O N N 16 5BU N3 N N N 17 5BU C4 C N N 18 5BU O4 O N N 19 5BU C5 C N N 20 5BU C6 C N N 21 5BU BR BR N N 22 5BU HOP2 H N N 23 5BU HOP3 H N N 24 5BU "H5'" H N N 25 5BU "H5''" H N N 26 5BU "H4'" H N N 27 5BU "H3'" H N N 28 5BU "HO3'" H N N 29 5BU "H2'" H N N 30 5BU "HO2'" H N N 31 5BU "H1'" H N N 32 5BU H3 H N N 33 5BU H6 H N N 34 A OP3 O N N 35 A P P N N 36 A OP1 O N N 37 A OP2 O N N 38 A "O5'" O N N 39 A "C5'" C N N 40 A "C4'" C N R 41 A "O4'" O N N 42 A "C3'" C N S 43 A "O3'" O N N 44 A "C2'" C N R 45 A "O2'" O N N 46 A "C1'" C N R 47 A N9 N Y N 48 A C8 C Y N 49 A N7 N Y N 50 A C5 C Y N 51 A C6 C Y N 52 A N6 N N N 53 A N1 N Y N 54 A C2 C Y N 55 A N3 N Y N 56 A C4 C Y N 57 A HOP3 H N N 58 A HOP2 H N N 59 A "H5'" H N N 60 A "H5''" H N N 61 A "H4'" H N N 62 A "H3'" H N N 63 A "HO3'" H N N 64 A "H2'" H N N 65 A "HO2'" H N N 66 A "H1'" H N N 67 A H8 H N N 68 A H61 H N N 69 A H62 H N N 70 A H2 H N N 71 ALA N N N N 72 ALA CA C N S 73 ALA C C N N 74 ALA O O N N 75 ALA CB C N N 76 ALA OXT O N N 77 ALA H H N N 78 ALA H2 H N N 79 ALA HA H N N 80 ALA HB1 H N N 81 ALA HB2 H N N 82 ALA HB3 H N N 83 ALA HXT H N N 84 ARG N N N N 85 ARG CA C N S 86 ARG C C N N 87 ARG O O N N 88 ARG CB C N N 89 ARG CG C N N 90 ARG CD C N N 91 ARG NE N N N 92 ARG CZ C N N 93 ARG NH1 N N N 94 ARG NH2 N N N 95 ARG OXT O N N 96 ARG H H N N 97 ARG H2 H N N 98 ARG HA H N N 99 ARG HB2 H N N 100 ARG HB3 H N N 101 ARG HG2 H N N 102 ARG HG3 H N N 103 ARG HD2 H N N 104 ARG HD3 H N N 105 ARG HE H N N 106 ARG HH11 H N N 107 ARG HH12 H N N 108 ARG HH21 H N N 109 ARG HH22 H N N 110 ARG HXT H N N 111 ASN N N N N 112 ASN CA C N S 113 ASN C C N N 114 ASN O O N N 115 ASN CB C N N 116 ASN CG C N N 117 ASN OD1 O N N 118 ASN ND2 N N N 119 ASN OXT O N N 120 ASN H H N N 121 ASN H2 H N N 122 ASN HA H N N 123 ASN HB2 H N N 124 ASN HB3 H N N 125 ASN HD21 H N N 126 ASN HD22 H N N 127 ASN HXT H N N 128 ASP N N N N 129 ASP CA C N S 130 ASP C C N N 131 ASP O O N N 132 ASP CB C N N 133 ASP CG C N N 134 ASP OD1 O N N 135 ASP OD2 O N N 136 ASP OXT O N N 137 ASP H H N N 138 ASP H2 H N N 139 ASP HA H N N 140 ASP HB2 H N N 141 ASP HB3 H N N 142 ASP HD2 H N N 143 ASP HXT H N N 144 C OP3 O N N 145 C P P N N 146 C OP1 O N N 147 C OP2 O N N 148 C "O5'" O N N 149 C "C5'" C N N 150 C "C4'" C N R 151 C "O4'" O N N 152 C "C3'" C N S 153 C "O3'" O N N 154 C "C2'" C N R 155 C "O2'" O N N 156 C "C1'" C N R 157 C N1 N N N 158 C C2 C N N 159 C O2 O N N 160 C N3 N N N 161 C C4 C N N 162 C N4 N N N 163 C C5 C N N 164 C C6 C N N 165 C HOP3 H N N 166 C HOP2 H N N 167 C "H5'" H N N 168 C "H5''" H N N 169 C "H4'" H N N 170 C "H3'" H N N 171 C "HO3'" H N N 172 C "H2'" H N N 173 C "HO2'" H N N 174 C "H1'" H N N 175 C H41 H N N 176 C H42 H N N 177 C H5 H N N 178 C H6 H N N 179 CYS N N N N 180 CYS CA C N R 181 CYS C C N N 182 CYS O O N N 183 CYS CB C N N 184 CYS SG S N N 185 CYS OXT O N N 186 CYS H H N N 187 CYS H2 H N N 188 CYS HA H N N 189 CYS HB2 H N N 190 CYS HB3 H N N 191 CYS HG H N N 192 CYS HXT H N N 193 G OP3 O N N 194 G P P N N 195 G OP1 O N N 196 G OP2 O N N 197 G "O5'" O N N 198 G "C5'" C N N 199 G "C4'" C N R 200 G "O4'" O N N 201 G "C3'" C N S 202 G "O3'" O N N 203 G "C2'" C N R 204 G "O2'" O N N 205 G "C1'" C N R 206 G N9 N Y N 207 G C8 C Y N 208 G N7 N Y N 209 G C5 C Y N 210 G C6 C N N 211 G O6 O N N 212 G N1 N N N 213 G C2 C N N 214 G N2 N N N 215 G N3 N N N 216 G C4 C Y N 217 G HOP3 H N N 218 G HOP2 H N N 219 G "H5'" H N N 220 G "H5''" H N N 221 G "H4'" H N N 222 G "H3'" H N N 223 G "HO3'" H N N 224 G "H2'" H N N 225 G "HO2'" H N N 226 G "H1'" H N N 227 G H8 H N N 228 G H1 H N N 229 G H21 H N N 230 G H22 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 ILE N N N N 302 ILE CA C N S 303 ILE C C N N 304 ILE O O N N 305 ILE CB C N S 306 ILE CG1 C N N 307 ILE CG2 C N N 308 ILE CD1 C N N 309 ILE OXT O N N 310 ILE H H N N 311 ILE H2 H N N 312 ILE HA H N N 313 ILE HB H N N 314 ILE HG12 H N N 315 ILE HG13 H N N 316 ILE HG21 H N N 317 ILE HG22 H N N 318 ILE HG23 H N N 319 ILE HD11 H N N 320 ILE HD12 H N N 321 ILE HD13 H N N 322 ILE HXT H N N 323 LEU N N N N 324 LEU CA C N S 325 LEU C C N N 326 LEU O O N N 327 LEU CB C N N 328 LEU CG C N N 329 LEU CD1 C N N 330 LEU CD2 C N N 331 LEU OXT O N N 332 LEU H H N N 333 LEU H2 H N N 334 LEU HA H N N 335 LEU HB2 H N N 336 LEU HB3 H N N 337 LEU HG H N N 338 LEU HD11 H N N 339 LEU HD12 H N N 340 LEU HD13 H N N 341 LEU HD21 H N N 342 LEU HD22 H N N 343 LEU HD23 H N N 344 LEU HXT H N N 345 LYS N N N N 346 LYS CA C N S 347 LYS C C N N 348 LYS O O N N 349 LYS CB C N N 350 LYS CG C N N 351 LYS CD C N N 352 LYS CE C N N 353 LYS NZ N N N 354 LYS OXT O N N 355 LYS H H N N 356 LYS H2 H N N 357 LYS HA H N N 358 LYS HB2 H N N 359 LYS HB3 H N N 360 LYS HG2 H N N 361 LYS HG3 H N N 362 LYS HD2 H N N 363 LYS HD3 H N N 364 LYS HE2 H N N 365 LYS HE3 H N N 366 LYS HZ1 H N N 367 LYS HZ2 H N N 368 LYS HZ3 H N N 369 LYS HXT H N N 370 MET N N N N 371 MET CA C N S 372 MET C C N N 373 MET O O N N 374 MET CB C N N 375 MET CG C N N 376 MET SD S N N 377 MET CE C N N 378 MET OXT O N N 379 MET H H N N 380 MET H2 H N N 381 MET HA H N N 382 MET HB2 H N N 383 MET HB3 H N N 384 MET HG2 H N N 385 MET HG3 H N N 386 MET HE1 H N N 387 MET HE2 H N N 388 MET HE3 H N N 389 MET HXT H N N 390 PHE N N N N 391 PHE CA C N S 392 PHE C C N N 393 PHE O O N N 394 PHE CB C N N 395 PHE CG C Y N 396 PHE CD1 C Y N 397 PHE CD2 C Y N 398 PHE CE1 C Y N 399 PHE CE2 C Y N 400 PHE CZ C Y N 401 PHE OXT O N N 402 PHE H H N N 403 PHE H2 H N N 404 PHE HA H N N 405 PHE HB2 H N N 406 PHE HB3 H N N 407 PHE HD1 H N N 408 PHE HD2 H N N 409 PHE HE1 H N N 410 PHE HE2 H N N 411 PHE HZ H N N 412 PHE HXT H N N 413 PRO N N N N 414 PRO CA C N S 415 PRO C C N N 416 PRO O O N N 417 PRO CB C N N 418 PRO CG C N N 419 PRO CD C N N 420 PRO OXT O N N 421 PRO H H N N 422 PRO HA H N N 423 PRO HB2 H N N 424 PRO HB3 H N N 425 PRO HG2 H N N 426 PRO HG3 H N N 427 PRO HD2 H N N 428 PRO HD3 H N N 429 PRO HXT H N N 430 SER N N N N 431 SER CA C N S 432 SER C C N N 433 SER O O N N 434 SER CB C N N 435 SER OG O N N 436 SER OXT O N N 437 SER H H N N 438 SER H2 H N N 439 SER HA H N N 440 SER HB2 H N N 441 SER HB3 H N N 442 SER HG H N N 443 SER HXT H N N 444 THR N N N N 445 THR CA C N S 446 THR C C N N 447 THR O O N N 448 THR CB C N R 449 THR OG1 O N N 450 THR CG2 C N N 451 THR OXT O N N 452 THR H H N N 453 THR H2 H N N 454 THR HA H N N 455 THR HB H N N 456 THR HG1 H N N 457 THR HG21 H N N 458 THR HG22 H N N 459 THR HG23 H N N 460 THR HXT H N N 461 TYR N N N N 462 TYR CA C N S 463 TYR C C N N 464 TYR O O N N 465 TYR CB C N N 466 TYR CG C Y N 467 TYR CD1 C Y N 468 TYR CD2 C Y N 469 TYR CE1 C Y N 470 TYR CE2 C Y N 471 TYR CZ C Y N 472 TYR OH O N N 473 TYR OXT O N N 474 TYR H H N N 475 TYR H2 H N N 476 TYR HA H N N 477 TYR HB2 H N N 478 TYR HB3 H N N 479 TYR HD1 H N N 480 TYR HD2 H N N 481 TYR HE1 H N N 482 TYR HE2 H N N 483 TYR HH H N N 484 TYR HXT H N N 485 U OP3 O N N 486 U P P N N 487 U OP1 O N N 488 U OP2 O N N 489 U "O5'" O N N 490 U "C5'" C N N 491 U "C4'" C N R 492 U "O4'" O N N 493 U "C3'" C N S 494 U "O3'" O N N 495 U "C2'" C N R 496 U "O2'" O N N 497 U "C1'" C N R 498 U N1 N N N 499 U C2 C N N 500 U O2 O N N 501 U N3 N N N 502 U C4 C N N 503 U O4 O N N 504 U C5 C N N 505 U C6 C N N 506 U HOP3 H N N 507 U HOP2 H N N 508 U "H5'" H N N 509 U "H5''" H N N 510 U "H4'" H N N 511 U "H3'" H N N 512 U "HO3'" H N N 513 U "H2'" H N N 514 U "HO2'" H N N 515 U "H1'" H N N 516 U H3 H N N 517 U H5 H N N 518 U H6 H N N 519 VAL N N N N 520 VAL CA C N S 521 VAL C C N N 522 VAL O O N N 523 VAL CB C N N 524 VAL CG1 C N N 525 VAL CG2 C N N 526 VAL OXT O N N 527 VAL H H N N 528 VAL H2 H N N 529 VAL HA H N N 530 VAL HB H N N 531 VAL HG11 H N N 532 VAL HG12 H N N 533 VAL HG13 H N N 534 VAL HG21 H N N 535 VAL HG22 H N N 536 VAL HG23 H N N 537 VAL HXT H N N 538 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5BU P OP1 doub N N 1 5BU P OP2 sing N N 2 5BU P OP3 sing N N 3 5BU P "O5'" sing N N 4 5BU OP2 HOP2 sing N N 5 5BU OP3 HOP3 sing N N 6 5BU "O5'" "C5'" sing N N 7 5BU "C5'" "C4'" sing N N 8 5BU "C5'" "H5'" sing N N 9 5BU "C5'" "H5''" sing N N 10 5BU "C4'" "O4'" sing N N 11 5BU "C4'" "C3'" sing N N 12 5BU "C4'" "H4'" sing N N 13 5BU "O4'" "C1'" sing N N 14 5BU "C3'" "O3'" sing N N 15 5BU "C3'" "C2'" sing N N 16 5BU "C3'" "H3'" sing N N 17 5BU "O3'" "HO3'" sing N N 18 5BU "C2'" "O2'" sing N N 19 5BU "C2'" "C1'" sing N N 20 5BU "C2'" "H2'" sing N N 21 5BU "O2'" "HO2'" sing N N 22 5BU "C1'" N1 sing N N 23 5BU "C1'" "H1'" sing N N 24 5BU N1 C2 sing N N 25 5BU N1 C6 sing N N 26 5BU C2 O2 doub N N 27 5BU C2 N3 sing N N 28 5BU N3 C4 sing N N 29 5BU N3 H3 sing N N 30 5BU C4 O4 doub N N 31 5BU C4 C5 sing N N 32 5BU C5 C6 doub N N 33 5BU C5 BR sing N N 34 5BU C6 H6 sing N N 35 A OP3 P sing N N 36 A OP3 HOP3 sing N N 37 A P OP1 doub N N 38 A P OP2 sing N N 39 A P "O5'" sing N N 40 A OP2 HOP2 sing N N 41 A "O5'" "C5'" sing N N 42 A "C5'" "C4'" sing N N 43 A "C5'" "H5'" sing N N 44 A "C5'" "H5''" sing N N 45 A "C4'" "O4'" sing N N 46 A "C4'" "C3'" sing N N 47 A "C4'" "H4'" sing N N 48 A "O4'" "C1'" sing N N 49 A "C3'" "O3'" sing N N 50 A "C3'" "C2'" sing N N 51 A "C3'" "H3'" sing N N 52 A "O3'" "HO3'" sing N N 53 A "C2'" "O2'" sing N N 54 A "C2'" "C1'" sing N N 55 A "C2'" "H2'" sing N N 56 A "O2'" "HO2'" sing N N 57 A "C1'" N9 sing N N 58 A "C1'" "H1'" sing N N 59 A N9 C8 sing Y N 60 A N9 C4 sing Y N 61 A C8 N7 doub Y N 62 A C8 H8 sing N N 63 A N7 C5 sing Y N 64 A C5 C6 sing Y N 65 A C5 C4 doub Y N 66 A C6 N6 sing N N 67 A C6 N1 doub Y N 68 A N6 H61 sing N N 69 A N6 H62 sing N N 70 A N1 C2 sing Y N 71 A C2 N3 doub Y N 72 A C2 H2 sing N N 73 A N3 C4 sing Y N 74 ALA N CA sing N N 75 ALA N H sing N N 76 ALA N H2 sing N N 77 ALA CA C sing N N 78 ALA CA CB sing N N 79 ALA CA HA sing N N 80 ALA C O doub N N 81 ALA C OXT sing N N 82 ALA CB HB1 sing N N 83 ALA CB HB2 sing N N 84 ALA CB HB3 sing N N 85 ALA OXT HXT sing N N 86 ARG N CA sing N N 87 ARG N H sing N N 88 ARG N H2 sing N N 89 ARG CA C sing N N 90 ARG CA CB sing N N 91 ARG CA HA sing N N 92 ARG C O doub N N 93 ARG C OXT sing N N 94 ARG CB CG sing N N 95 ARG CB HB2 sing N N 96 ARG CB HB3 sing N N 97 ARG CG CD sing N N 98 ARG CG HG2 sing N N 99 ARG CG HG3 sing N N 100 ARG CD NE sing N N 101 ARG CD HD2 sing N N 102 ARG CD HD3 sing N N 103 ARG NE CZ sing N N 104 ARG NE HE sing N N 105 ARG CZ NH1 sing N N 106 ARG CZ NH2 doub N N 107 ARG NH1 HH11 sing N N 108 ARG NH1 HH12 sing N N 109 ARG NH2 HH21 sing N N 110 ARG NH2 HH22 sing N N 111 ARG OXT HXT sing N N 112 ASN N CA sing N N 113 ASN N H sing N N 114 ASN N H2 sing N N 115 ASN CA C sing N N 116 ASN CA CB sing N N 117 ASN CA HA sing N N 118 ASN C O doub N N 119 ASN C OXT sing N N 120 ASN CB CG sing N N 121 ASN CB HB2 sing N N 122 ASN CB HB3 sing N N 123 ASN CG OD1 doub N N 124 ASN CG ND2 sing N N 125 ASN ND2 HD21 sing N N 126 ASN ND2 HD22 sing N N 127 ASN OXT HXT sing N N 128 ASP N CA sing N N 129 ASP N H sing N N 130 ASP N H2 sing N N 131 ASP CA C sing N N 132 ASP CA CB sing N N 133 ASP CA HA sing N N 134 ASP C O doub N N 135 ASP C OXT sing N N 136 ASP CB CG sing N N 137 ASP CB HB2 sing N N 138 ASP CB HB3 sing N N 139 ASP CG OD1 doub N N 140 ASP CG OD2 sing N N 141 ASP OD2 HD2 sing N N 142 ASP OXT HXT sing N N 143 C OP3 P sing N N 144 C OP3 HOP3 sing N N 145 C P OP1 doub N N 146 C P OP2 sing N N 147 C P "O5'" sing N N 148 C OP2 HOP2 sing N N 149 C "O5'" "C5'" sing N N 150 C "C5'" "C4'" sing N N 151 C "C5'" "H5'" sing N N 152 C "C5'" "H5''" sing N N 153 C "C4'" "O4'" sing N N 154 C "C4'" "C3'" sing N N 155 C "C4'" "H4'" sing N N 156 C "O4'" "C1'" sing N N 157 C "C3'" "O3'" sing N N 158 C "C3'" "C2'" sing N N 159 C "C3'" "H3'" sing N N 160 C "O3'" "HO3'" sing N N 161 C "C2'" "O2'" sing N N 162 C "C2'" "C1'" sing N N 163 C "C2'" "H2'" sing N N 164 C "O2'" "HO2'" sing N N 165 C "C1'" N1 sing N N 166 C "C1'" "H1'" sing N N 167 C N1 C2 sing N N 168 C N1 C6 sing N N 169 C C2 O2 doub N N 170 C C2 N3 sing N N 171 C N3 C4 doub N N 172 C C4 N4 sing N N 173 C C4 C5 sing N N 174 C N4 H41 sing N N 175 C N4 H42 sing N N 176 C C5 C6 doub N N 177 C C5 H5 sing N N 178 C C6 H6 sing N N 179 CYS N CA sing N N 180 CYS N H sing N N 181 CYS N H2 sing N N 182 CYS CA C sing N N 183 CYS CA CB sing N N 184 CYS CA HA sing N N 185 CYS C O doub N N 186 CYS C OXT sing N N 187 CYS CB SG sing N N 188 CYS CB HB2 sing N N 189 CYS CB HB3 sing N N 190 CYS SG HG sing N N 191 CYS OXT HXT sing N N 192 G OP3 P sing N N 193 G OP3 HOP3 sing N N 194 G P OP1 doub N N 195 G P OP2 sing N N 196 G P "O5'" sing N N 197 G OP2 HOP2 sing N N 198 G "O5'" "C5'" sing N N 199 G "C5'" "C4'" sing N N 200 G "C5'" "H5'" sing N N 201 G "C5'" "H5''" sing N N 202 G "C4'" "O4'" sing N N 203 G "C4'" "C3'" sing N N 204 G "C4'" "H4'" sing N N 205 G "O4'" "C1'" sing N N 206 G "C3'" "O3'" sing N N 207 G "C3'" "C2'" sing N N 208 G "C3'" "H3'" sing N N 209 G "O3'" "HO3'" sing N N 210 G "C2'" "O2'" sing N N 211 G "C2'" "C1'" sing N N 212 G "C2'" "H2'" sing N N 213 G "O2'" "HO2'" sing N N 214 G "C1'" N9 sing N N 215 G "C1'" "H1'" sing N N 216 G N9 C8 sing Y N 217 G N9 C4 sing Y N 218 G C8 N7 doub Y N 219 G C8 H8 sing N N 220 G N7 C5 sing Y N 221 G C5 C6 sing N N 222 G C5 C4 doub Y N 223 G C6 O6 doub N N 224 G C6 N1 sing N N 225 G N1 C2 sing N N 226 G N1 H1 sing N N 227 G C2 N2 sing N N 228 G C2 N3 doub N N 229 G N2 H21 sing N N 230 G N2 H22 sing N N 231 G N3 C4 sing N N 232 GLN N CA sing N N 233 GLN N H sing N N 234 GLN N H2 sing N N 235 GLN CA C sing N N 236 GLN CA CB sing N N 237 GLN CA HA sing N N 238 GLN C O doub N N 239 GLN C OXT sing N N 240 GLN CB CG sing N N 241 GLN CB HB2 sing N N 242 GLN CB HB3 sing N N 243 GLN CG CD sing N N 244 GLN CG HG2 sing N N 245 GLN CG HG3 sing N N 246 GLN CD OE1 doub N N 247 GLN CD NE2 sing N N 248 GLN NE2 HE21 sing N N 249 GLN NE2 HE22 sing N N 250 GLN OXT HXT sing N N 251 GLU N CA sing N N 252 GLU N H sing N N 253 GLU N H2 sing N N 254 GLU CA C sing N N 255 GLU CA CB sing N N 256 GLU CA HA sing N N 257 GLU C O doub N N 258 GLU C OXT sing N N 259 GLU CB CG sing N N 260 GLU CB HB2 sing N N 261 GLU CB HB3 sing N N 262 GLU CG CD sing N N 263 GLU CG HG2 sing N N 264 GLU CG HG3 sing N N 265 GLU CD OE1 doub N N 266 GLU CD OE2 sing N N 267 GLU OE2 HE2 sing N N 268 GLU OXT HXT sing N N 269 GLY N CA sing N N 270 GLY N H sing N N 271 GLY N H2 sing N N 272 GLY CA C sing N N 273 GLY CA HA2 sing N N 274 GLY CA HA3 sing N N 275 GLY C O doub N N 276 GLY C OXT sing N N 277 GLY OXT HXT sing N N 278 HIS N CA sing N N 279 HIS N H sing N N 280 HIS N H2 sing N N 281 HIS CA C sing N N 282 HIS CA CB sing N N 283 HIS CA HA sing N N 284 HIS C O doub N N 285 HIS C OXT sing N N 286 HIS CB CG sing N N 287 HIS CB HB2 sing N N 288 HIS CB HB3 sing N N 289 HIS CG ND1 sing Y N 290 HIS CG CD2 doub Y N 291 HIS ND1 CE1 doub Y N 292 HIS ND1 HD1 sing N N 293 HIS CD2 NE2 sing Y N 294 HIS CD2 HD2 sing N N 295 HIS CE1 NE2 sing Y N 296 HIS CE1 HE1 sing N N 297 HIS NE2 HE2 sing N N 298 HIS OXT HXT sing N N 299 ILE N CA sing N N 300 ILE N H sing N N 301 ILE N H2 sing N N 302 ILE CA C sing N N 303 ILE CA CB sing N N 304 ILE CA HA sing N N 305 ILE C O doub N N 306 ILE C OXT sing N N 307 ILE CB CG1 sing N N 308 ILE CB CG2 sing N N 309 ILE CB HB sing N N 310 ILE CG1 CD1 sing N N 311 ILE CG1 HG12 sing N N 312 ILE CG1 HG13 sing N N 313 ILE CG2 HG21 sing N N 314 ILE CG2 HG22 sing N N 315 ILE CG2 HG23 sing N N 316 ILE CD1 HD11 sing N N 317 ILE CD1 HD12 sing N N 318 ILE CD1 HD13 sing N N 319 ILE OXT HXT sing N N 320 LEU N CA sing N N 321 LEU N H sing N N 322 LEU N H2 sing N N 323 LEU CA C sing N N 324 LEU CA CB sing N N 325 LEU CA HA sing N N 326 LEU C O doub N N 327 LEU C OXT sing N N 328 LEU CB CG sing N N 329 LEU CB HB2 sing N N 330 LEU CB HB3 sing N N 331 LEU CG CD1 sing N N 332 LEU CG CD2 sing N N 333 LEU CG HG sing N N 334 LEU CD1 HD11 sing N N 335 LEU CD1 HD12 sing N N 336 LEU CD1 HD13 sing N N 337 LEU CD2 HD21 sing N N 338 LEU CD2 HD22 sing N N 339 LEU CD2 HD23 sing N N 340 LEU OXT HXT sing N N 341 LYS N CA sing N N 342 LYS N H sing N N 343 LYS N H2 sing N N 344 LYS CA C sing N N 345 LYS CA CB sing N N 346 LYS CA HA sing N N 347 LYS C O doub N N 348 LYS C OXT sing N N 349 LYS CB CG sing N N 350 LYS CB HB2 sing N N 351 LYS CB HB3 sing N N 352 LYS CG CD sing N N 353 LYS CG HG2 sing N N 354 LYS CG HG3 sing N N 355 LYS CD CE sing N N 356 LYS CD HD2 sing N N 357 LYS CD HD3 sing N N 358 LYS CE NZ sing N N 359 LYS CE HE2 sing N N 360 LYS CE HE3 sing N N 361 LYS NZ HZ1 sing N N 362 LYS NZ HZ2 sing N N 363 LYS NZ HZ3 sing N N 364 LYS OXT HXT sing N N 365 MET N CA sing N N 366 MET N H sing N N 367 MET N H2 sing N N 368 MET CA C sing N N 369 MET CA CB sing N N 370 MET CA HA sing N N 371 MET C O doub N N 372 MET C OXT sing N N 373 MET CB CG sing N N 374 MET CB HB2 sing N N 375 MET CB HB3 sing N N 376 MET CG SD sing N N 377 MET CG HG2 sing N N 378 MET CG HG3 sing N N 379 MET SD CE sing N N 380 MET CE HE1 sing N N 381 MET CE HE2 sing N N 382 MET CE HE3 sing N N 383 MET OXT HXT sing N N 384 PHE N CA sing N N 385 PHE N H sing N N 386 PHE N H2 sing N N 387 PHE CA C sing N N 388 PHE CA CB sing N N 389 PHE CA HA sing N N 390 PHE C O doub N N 391 PHE C OXT sing N N 392 PHE CB CG sing N N 393 PHE CB HB2 sing N N 394 PHE CB HB3 sing N N 395 PHE CG CD1 doub Y N 396 PHE CG CD2 sing Y N 397 PHE CD1 CE1 sing Y N 398 PHE CD1 HD1 sing N N 399 PHE CD2 CE2 doub Y N 400 PHE CD2 HD2 sing N N 401 PHE CE1 CZ doub Y N 402 PHE CE1 HE1 sing N N 403 PHE CE2 CZ sing Y N 404 PHE CE2 HE2 sing N N 405 PHE CZ HZ sing N N 406 PHE OXT HXT sing N N 407 PRO N CA sing N N 408 PRO N CD sing N N 409 PRO N H sing N N 410 PRO CA C sing N N 411 PRO CA CB sing N N 412 PRO CA HA sing N N 413 PRO C O doub N N 414 PRO C OXT sing N N 415 PRO CB CG sing N N 416 PRO CB HB2 sing N N 417 PRO CB HB3 sing N N 418 PRO CG CD sing N N 419 PRO CG HG2 sing N N 420 PRO CG HG3 sing N N 421 PRO CD HD2 sing N N 422 PRO CD HD3 sing N N 423 PRO OXT HXT sing N N 424 SER N CA sing N N 425 SER N H sing N N 426 SER N H2 sing N N 427 SER CA C sing N N 428 SER CA CB sing N N 429 SER CA HA sing N N 430 SER C O doub N N 431 SER C OXT sing N N 432 SER CB OG sing N N 433 SER CB HB2 sing N N 434 SER CB HB3 sing N N 435 SER OG HG sing N N 436 SER OXT HXT sing N N 437 THR N CA sing N N 438 THR N H sing N N 439 THR N H2 sing N N 440 THR CA C sing N N 441 THR CA CB sing N N 442 THR CA HA sing N N 443 THR C O doub N N 444 THR C OXT sing N N 445 THR CB OG1 sing N N 446 THR CB CG2 sing N N 447 THR CB HB sing N N 448 THR OG1 HG1 sing N N 449 THR CG2 HG21 sing N N 450 THR CG2 HG22 sing N N 451 THR CG2 HG23 sing N N 452 THR OXT HXT sing N N 453 TYR N CA sing N N 454 TYR N H sing N N 455 TYR N H2 sing N N 456 TYR CA C sing N N 457 TYR CA CB sing N N 458 TYR CA HA sing N N 459 TYR C O doub N N 460 TYR C OXT sing N N 461 TYR CB CG sing N N 462 TYR CB HB2 sing N N 463 TYR CB HB3 sing N N 464 TYR CG CD1 doub Y N 465 TYR CG CD2 sing Y N 466 TYR CD1 CE1 sing Y N 467 TYR CD1 HD1 sing N N 468 TYR CD2 CE2 doub Y N 469 TYR CD2 HD2 sing N N 470 TYR CE1 CZ doub Y N 471 TYR CE1 HE1 sing N N 472 TYR CE2 CZ sing Y N 473 TYR CE2 HE2 sing N N 474 TYR CZ OH sing N N 475 TYR OH HH sing N N 476 TYR OXT HXT sing N N 477 U OP3 P sing N N 478 U OP3 HOP3 sing N N 479 U P OP1 doub N N 480 U P OP2 sing N N 481 U P "O5'" sing N N 482 U OP2 HOP2 sing N N 483 U "O5'" "C5'" sing N N 484 U "C5'" "C4'" sing N N 485 U "C5'" "H5'" sing N N 486 U "C5'" "H5''" sing N N 487 U "C4'" "O4'" sing N N 488 U "C4'" "C3'" sing N N 489 U "C4'" "H4'" sing N N 490 U "O4'" "C1'" sing N N 491 U "C3'" "O3'" sing N N 492 U "C3'" "C2'" sing N N 493 U "C3'" "H3'" sing N N 494 U "O3'" "HO3'" sing N N 495 U "C2'" "O2'" sing N N 496 U "C2'" "C1'" sing N N 497 U "C2'" "H2'" sing N N 498 U "O2'" "HO2'" sing N N 499 U "C1'" N1 sing N N 500 U "C1'" "H1'" sing N N 501 U N1 C2 sing N N 502 U N1 C6 sing N N 503 U C2 O2 doub N N 504 U C2 N3 sing N N 505 U N3 C4 sing N N 506 U N3 H3 sing N N 507 U C4 O4 doub N N 508 U C4 C5 sing N N 509 U C5 C6 doub N N 510 U C5 H5 sing N N 511 U C6 H6 sing N N 512 VAL N CA sing N N 513 VAL N H sing N N 514 VAL N H2 sing N N 515 VAL CA C sing N N 516 VAL CA CB sing N N 517 VAL CA HA sing N N 518 VAL C O doub N N 519 VAL C OXT sing N N 520 VAL CB CG1 sing N N 521 VAL CB CG2 sing N N 522 VAL CB HB sing N N 523 VAL CG1 HG11 sing N N 524 VAL CG1 HG12 sing N N 525 VAL CG1 HG13 sing N N 526 VAL CG2 HG21 sing N N 527 VAL CG2 HG22 sing N N 528 VAL CG2 HG23 sing N N 529 VAL OXT HXT sing N N 530 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1RLG 'double helix' 1RLG tetraloop 1RLG 'bulge loop' 1RLG 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 19 1_555 A A 7 1_555 6.525 -3.851 0.821 20.286 23.539 8.001 1 C_G19:A7_C C 19 ? C 7 ? 11 9 1 A A 20 1_555 A G 6 1_555 -6.576 -4.619 0.552 -22.796 4.990 0.679 2 C_A20:G6_C C 20 ? C 6 ? 11 10 1 A 5BU 21 1_555 A 5BU 5 1_555 -2.367 -1.688 -0.157 -3.966 -13.198 -0.460 3 C_5BU21:5BU5_C C 21 ? C 5 ? 16 1 1 A G 22 1_555 A C 4 1_555 -0.695 0.107 -0.554 -6.536 -5.680 6.782 4 C_G22:C4_C C 22 ? C 4 ? 19 1 1 A A 23 1_555 A 5BU 3 1_555 -0.013 -2.418 0.825 0.211 12.020 93.894 5 C_A23:5BU3_C C 23 ? C 3 ? ? ? 1 A G 24 1_555 A C 2 1_555 -0.449 -0.284 -0.077 -5.173 -6.874 0.720 6 C_G24:C2_C C 24 ? C 2 ? 19 1 1 A C 25 1_555 A G 1 1_555 0.754 -0.257 0.177 4.785 -2.029 3.099 7 C_C25:G1_C C 25 ? C 1 ? 19 1 1 B G 1 1_555 B C 25 1_555 -0.484 -0.350 0.031 -5.482 0.094 -2.202 8 D_G1:C25_D D 1 ? D 25 ? 19 1 1 B C 2 1_555 B G 24 1_555 0.425 -0.245 0.130 2.520 -2.184 0.276 9 D_C2:G24_D D 2 ? D 24 ? 19 1 1 B 5BU 3 1_555 B A 23 1_555 0.233 2.537 -0.126 -7.012 -5.649 -97.480 10 D_5BU3:A23_D D 3 ? D 23 ? ? ? 1 B C 4 1_555 B G 22 1_555 0.765 -0.104 0.146 3.771 -4.737 3.544 11 D_C4:G22_D D 4 ? D 22 ? 19 1 1 B 5BU 5 1_555 B 5BU 21 1_555 2.627 -1.586 -0.303 6.280 -10.155 -7.722 12 D_5BU5:5BU21_D D 5 ? D 21 ? ? ? 1 B G 6 1_555 B A 20 1_555 6.796 -4.362 0.879 19.312 1.675 -0.802 13 D_G6:A20_D D 6 ? D 20 ? 11 9 1 B A 7 1_555 B G 19 1_555 -6.762 -4.053 0.157 -20.098 20.321 2.080 14 D_A7:G19_D D 7 ? D 19 ? 11 9 1 A A 13 1_555 A G 10 1_555 -7.049 -5.208 0.761 -13.119 -0.826 -15.653 15 C_A13:G10_C C 13 ? C 10 ? ? ? 1 A G 14 1_555 A C 9 1_555 -0.322 -0.183 -0.253 -1.258 0.145 -2.183 16 C_G14:C9_C C 14 ? C 9 ? 19 1 1 A G 15 1_555 A C 8 1_555 -0.269 -0.196 -0.220 5.103 -6.117 -3.001 17 C_G15:C8_C C 15 ? C 8 ? 19 1 1 A C 16 1_555 A G 17 1_555 2.324 4.673 -1.398 26.084 -46.284 132.910 18 C_C16:G17_C C 16 ? C 17 ? ? ? 1 B A 13 1_555 B G 10 1_555 -6.835 -5.198 0.537 -16.357 9.987 -16.715 19 D_A13:G10_D D 13 ? D 10 ? ? ? 1 B G 14 1_555 B C 9 1_555 -0.422 -0.144 -0.441 -6.604 2.808 2.382 20 D_G14:C9_D D 14 ? D 9 ? 19 1 1 B G 15 1_555 B C 8 1_555 -0.291 -0.164 0.254 5.713 -1.115 6.769 21 D_G15:C8_D D 15 ? D 8 ? 19 1 1 B C 16 1_555 B G 17 1_555 2.219 5.634 -1.342 22.034 -43.936 133.953 22 D_C16:G17_D D 16 ? D 17 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 19 1_555 A A 7 1_555 A A 20 1_555 A G 6 1_555 -1.044 -1.971 4.357 -6.398 -11.445 -6.889 16.675 -9.096 0.059 54.468 -30.447 -14.804 1 CC_G19A20:G6A7_CC C 19 ? C 7 ? C 20 ? C 6 ? 1 A A 20 1_555 A G 6 1_555 A 5BU 21 1_555 A 5BU 5 1_555 -0.529 -0.500 3.286 -6.214 9.181 49.583 -1.232 0.179 3.193 10.791 7.304 50.731 2 CC_A205BU21:5BU5G6_CC C 20 ? C 6 ? C 21 ? C 5 ? 1 A 5BU 21 1_555 A 5BU 5 1_555 A G 22 1_555 A C 4 1_555 -0.108 -1.426 3.432 -0.774 8.665 34.515 -3.597 0.064 2.999 14.324 1.280 35.562 3 CC_5BU21G22:C45BU5_CC C 21 ? C 5 ? C 22 ? C 4 ? 1 A G 22 1_555 A C 4 1_555 A A 23 1_555 A 5BU 3 1_555 0.439 3.453 -0.233 170.923 -21.044 -166.191 -1.728 0.205 -0.233 10.525 85.490 -179.065 4 CC_G22A23:5BU3C4_CC C 22 ? C 4 ? C 23 ? C 3 ? 1 A A 23 1_555 A 5BU 3 1_555 A G 24 1_555 A C 2 1_555 -0.614 -3.504 -1.898 135.098 -108.253 58.988 -2.000 0.001 0.553 -55.218 -68.911 174.012 5 CC_A23G24:C25BU3_CC C 23 ? C 3 ? C 24 ? C 2 ? 1 A G 24 1_555 A C 2 1_555 A C 25 1_555 A G 1 1_555 0.333 -1.646 3.077 -0.558 0.385 36.583 -2.672 -0.602 3.055 0.613 0.889 36.589 6 CC_G24C25:G1C2_CC C 24 ? C 2 ? C 25 ? C 1 ? 1 A C 25 1_555 A G 1 1_555 B G 1 1_555 B C 25 1_555 -0.124 -4.372 3.405 -0.379 1.398 -19.546 12.105 -0.565 3.702 -4.110 -1.115 -19.599 7 CD_C25G1:C25G1_DC C 25 ? C 1 ? D 1 ? D 25 ? 1 B G 1 1_555 B C 25 1_555 B C 2 1_555 B G 24 1_555 -0.119 -2.174 3.153 -1.778 -0.569 35.468 -3.483 -0.056 3.188 -0.933 2.916 35.516 8 DD_G1C2:G24C25_DD D 1 ? D 25 ? D 2 ? D 24 ? 1 B C 2 1_555 B G 24 1_555 B 5BU 3 1_555 B A 23 1_555 -0.395 -2.804 3.266 3.204 -0.184 76.260 -2.264 0.414 3.255 -0.149 -2.593 76.317 9 DD_C25BU3:A23G24_DD D 2 ? D 24 ? D 3 ? D 23 ? 1 B 5BU 3 1_555 B A 23 1_555 B C 4 1_555 B G 22 1_555 -1.208 -0.765 3.271 -1.904 7.477 -19.738 -1.110 -4.099 3.211 -20.813 -5.301 -21.179 10 DD_5BU3C4:G22A23_DD D 3 ? D 23 ? D 4 ? D 22 ? 1 B C 4 1_555 B G 22 1_555 B 5BU 5 1_555 B 5BU 21 1_555 -0.479 -1.937 3.353 3.619 3.160 35.086 -3.646 1.317 3.109 5.212 -5.968 35.403 11 DD_C45BU5:5BU21G22_DD D 4 ? D 22 ? D 5 ? D 21 ? 1 B 5BU 5 1_555 B 5BU 21 1_555 B G 6 1_555 B A 20 1_555 0.816 -0.836 3.439 5.190 12.972 49.141 -1.908 -0.574 3.202 15.244 -6.099 50.969 12 DD_5BU5G6:A205BU21_DD D 5 ? D 21 ? D 6 ? D 20 ? 1 B G 6 1_555 B A 20 1_555 B A 7 1_555 B G 19 1_555 0.339 -1.898 4.313 4.063 -7.829 -8.565 19.370 7.033 1.690 40.762 21.154 -12.289 13 DD_G6A7:G19A20_DD D 6 ? D 20 ? D 7 ? D 19 ? 1 A A 13 1_555 A G 10 1_555 A G 14 1_555 A C 9 1_555 2.306 -1.010 2.913 3.603 7.855 47.196 -1.798 -2.584 2.878 9.715 -4.457 47.936 14 CC_A13G14:C9G10_CC C 13 ? C 10 ? C 14 ? C 9 ? 1 A G 14 1_555 A C 9 1_555 A G 15 1_555 A C 8 1_555 0.302 -1.789 3.195 0.872 4.185 34.926 -3.550 -0.376 2.974 6.940 -1.447 35.179 15 CC_G14G15:C8C9_CC C 14 ? C 9 ? C 15 ? C 8 ? 1 A G 15 1_555 A C 8 1_555 A C 16 1_555 A G 17 1_555 0.569 -2.217 4.466 -4.474 39.750 -17.257 -4.296 -0.052 3.883 -67.175 -7.561 -43.425 16 CC_G15C16:G17C8_CC C 15 ? C 8 ? C 16 ? C 17 ? 1 B A 13 1_555 B G 10 1_555 B G 14 1_555 B C 9 1_555 2.057 -1.380 2.989 3.133 9.458 50.724 -2.159 -2.172 2.820 10.920 -3.617 51.630 17 DD_A13G14:C9G10_DD D 13 ? D 10 ? D 14 ? D 9 ? 1 B G 14 1_555 B C 9 1_555 B G 15 1_555 B C 8 1_555 0.219 -2.040 2.980 -4.579 -0.299 29.512 -3.903 -1.291 2.933 -0.583 8.921 29.858 18 DD_G14G15:C8C9_DD D 14 ? D 9 ? D 15 ? D 8 ? 1 B G 15 1_555 B C 8 1_555 B C 16 1_555 B G 17 1_555 0.051 -2.944 4.605 -3.713 33.708 -19.361 -3.678 -0.815 4.856 -60.755 -6.692 -38.908 19 DD_G15C16:G17C8_DD D 15 ? D 8 ? D 16 ? D 17 ? # _atom_sites.entry_id 1RLG _atom_sites.fract_transf_matrix[1][1] 0.008293 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008293 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008293 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O P S # loop_