HEADER IMMUNOGLOBULIN 16-DEC-94 1RMF TITLE STRUCTURES OF A MONOCLONAL ANTI-ICAM-1 ANTIBODY R6.5 TITLE 2 FRAGMENT AT 2.8 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG2A-KAPPA R6.5 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IGG2A-KAPPA R6.5 FAB (HEAVY CHAIN); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.JEDRZEJAS,M.LUO REVDAT 3 25-AUG-09 1RMF 1 SOURCE REVDAT 2 24-FEB-09 1RMF 1 VERSN REVDAT 1 27-FEB-95 1RMF 0 JRNL AUTH M.J.JEDRZEJAS,J.MIGLIETTA,J.A.GRIFFIN,M.LUO JRNL TITL STRUCTURE OF A MONOCLONAL ANTI-ICAM-1 ANTIBODY R6.5 JRNL TITL 2 FAB FRAGMENT AT 2.8 A RESOLUTION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 51 380 1995 JRNL REFN ISSN 0907-4449 JRNL PMID 15299305 JRNL DOI 10.1107/S0907444994011054 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 10606 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4091 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 117 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 3.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RMF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12598 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.18000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.66000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 68.88000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.66000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.18000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 68.88000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 31 NE2 HIS L 31 CD2 -0.067 REMARK 500 HIS L 39 NE2 HIS L 39 CD2 -0.075 REMARK 500 HIS L 203 NE2 HIS L 203 CD2 -0.086 REMARK 500 HIS H 35 NE2 HIS H 35 CD2 -0.085 REMARK 500 HIS H 41 NE2 HIS H 41 CD2 -0.067 REMARK 500 HIS H 170 NE2 HIS H 170 CD2 -0.070 REMARK 500 HIS H 205 NE2 HIS H 205 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP L 40 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP L 40 CE2 - CD2 - CG ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG L 113 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 TRP L 153 CD1 - CG - CD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP L 153 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 GLN L 161 N - CA - C ANGL. DEV. = 21.0 DEGREES REMARK 500 TRP L 168 CD1 - CG - CD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 TRP L 168 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP H 36 CD1 - CG - CD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 TRP H 36 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 TRP H 47 CD1 - CG - CD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 TRP H 47 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 TRP H 101 CD1 - CG - CD2 ANGL. DEV. = 8.5 DEGREES REMARK 500 TRP H 101 CG - CD1 - NE1 ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP H 101 CE2 - CD2 - CG ANGL. DEV. = -6.3 DEGREES REMARK 500 LEU H 104 N - CA - C ANGL. DEV. = 17.4 DEGREES REMARK 500 TRP H 109 CD1 - CG - CD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 TRP H 109 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 TRP H 160 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP H 160 CE2 - CD2 - CG ANGL. DEV. = -5.1 DEGREES REMARK 500 TRP H 194 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP H 194 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 LYS H 211 N - CA - C ANGL. DEV. = 27.3 DEGREES REMARK 500 LYS H 215 CA - C - N ANGL. DEV. = -17.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR L 37 73.23 -101.49 REMARK 500 LYS L 55 -111.53 80.13 REMARK 500 VAL L 56 -33.19 -132.83 REMARK 500 ASP L 65 -3.39 -54.47 REMARK 500 SER L 72 123.41 -172.23 REMARK 500 ARG L 113 -159.09 -127.48 REMARK 500 PRO L 146 -178.54 -63.82 REMARK 500 GLU L 159 59.15 -106.98 REMARK 500 ARG L 160 13.71 -64.99 REMARK 500 LYS L 174 -96.74 -87.15 REMARK 500 ASP L 175 0.62 -63.78 REMARK 500 ASN L 195 -81.69 -102.20 REMARK 500 LYS L 204 -2.05 -53.13 REMARK 500 ARG L 216 159.37 115.05 REMARK 500 ASN L 217 106.91 116.43 REMARK 500 LYS H 43 -3.36 50.73 REMARK 500 SER H 52 165.79 78.88 REMARK 500 ALA H 53 -142.47 44.72 REMARK 500 THR H 58 -94.37 75.96 REMARK 500 TYR H 60 74.98 -168.25 REMARK 500 GLN H 62 -61.91 -15.41 REMARK 500 ASP H 73 69.02 -164.54 REMARK 500 ASN H 77 38.21 34.97 REMARK 500 GLU H 89 -8.71 -57.73 REMARK 500 ALA H 92 -175.70 -170.18 REMARK 500 TRP H 101 -145.98 -75.30 REMARK 500 LEU H 102 -13.13 -47.80 REMARK 500 LEU H 104 119.82 -26.39 REMARK 500 SER H 105 -136.83 59.15 REMARK 500 THR H 114 121.88 80.43 REMARK 500 VAL H 133 -114.39 19.54 REMARK 500 SER H 140 -36.15 121.77 REMARK 500 ASN H 161 63.43 39.37 REMARK 500 SER H 162 -3.05 53.21 REMARK 500 GLN H 177 -60.24 -100.76 REMARK 500 SER H 178 79.48 -158.73 REMARK 500 ASP H 179 -33.47 81.64 REMARK 500 SER H 196 -18.67 -49.82 REMARK 500 GLN H 197 51.16 72.55 REMARK 500 PRO H 206 -31.61 -29.33 REMARK 500 SER H 208 80.76 73.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA H 131 PRO H 132 -139.04 REMARK 500 TRP H 194 PRO H 195 51.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR H 181 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS H 215 12.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 217 DISTANCE = 9.18 ANGSTROMS REMARK 525 HOH L 220 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH H 218 DISTANCE = 5.49 ANGSTROMS REMARK 525 HOH L 221 DISTANCE = 8.09 ANGSTROMS REMARK 525 HOH H 219 DISTANCE = 12.56 ANGSTROMS REMARK 525 HOH L 222 DISTANCE = 12.33 ANGSTROMS REMARK 525 HOH H 220 DISTANCE = 15.23 ANGSTROMS REMARK 525 HOH H 221 DISTANCE = 7.62 ANGSTROMS REMARK 525 HOH H 222 DISTANCE = 8.33 ANGSTROMS REMARK 525 HOH L 225 DISTANCE = 10.65 ANGSTROMS REMARK 525 HOH H 225 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH H 228 DISTANCE = 10.17 ANGSTROMS REMARK 525 HOH L 234 DISTANCE = 7.72 ANGSTROMS REMARK 525 HOH H 232 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH L 235 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH H 233 DISTANCE = 11.68 ANGSTROMS REMARK 525 HOH L 236 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH L 237 DISTANCE = 5.05 ANGSTROMS REMARK 525 HOH L 238 DISTANCE = 11.72 ANGSTROMS REMARK 525 HOH L 239 DISTANCE = 7.83 ANGSTROMS REMARK 525 HOH L 240 DISTANCE = 7.70 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CL1 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COMPLEMENTARITY DETERMINING REGION FOR LIGHT REMARK 800 CHAIN, 1 REMARK 800 SITE_IDENTIFIER: CL2 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COMPLEMENTARITY DETERMINING REGION FOR LIGHT REMARK 800 CHAIN, 2 REMARK 800 SITE_IDENTIFIER: CL3 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COMPLEMENTARITY DETERMINING REGION FOR LIGHT REMARK 800 CHAIN, 3 REMARK 800 SITE_IDENTIFIER: CH1 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COMPLEMENTARITY DETERMINING REGION FOR HEAVY REMARK 800 CHAIN, 1 REMARK 800 SITE_IDENTIFIER: CH2 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COMPLEMENTARITY DETERMINING REGION FOR HEAVY REMARK 800 CHAIN, 2 REMARK 800 SITE_IDENTIFIER: CH3 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: COMPLEMENTARITY DETERMINING REGION FOR HEAVY REMARK 800 CHAIN, 3 DBREF 1RMF L 1 219 PIR S16112 S16112 1 219 DBREF 1RMF H 2 213 GB 2852989 AAC02212 1 213 SEQADV 1RMF SER L 7 PIR S16112 THR 7 CONFLICT SEQADV 1RMF ASN L 36 PIR S16112 THR 36 CONFLICT SEQADV 1RMF HIS L 39 PIR S16112 TYR 39 CONFLICT SEQADV 1RMF SER L 45 PIR S16112 PRO 45 CONFLICT SEQADV 1RMF ALA L 48 PIR S16112 SER 48 CONFLICT SEQADV 1RMF LEU L 51 PIR S16112 PRO 51 CONFLICT SEQADV 1RMF LYS L 55 PIR S16112 ARG 55 CONFLICT SEQADV 1RMF SER L 94 PIR S16112 PHE 94 CONFLICT SEQADV 1RMF SER L 96 PIR S16112 GLY 96 CONFLICT SEQADV 1RMF LEU L 101 PIR S16112 TYR 101 CONFLICT SEQADV 1RMF LYS L 108 PIR S16112 ARG 108 CONFLICT SEQADV 1RMF GLN H 6 GB 2852989 GLU 5 CONFLICT SEQADV 1RMF ILE H 30 GB 2852989 THR 29 CONFLICT SEQADV 1RMF ALA H 33 GB 2852989 PRO 32 CONFLICT SEQADV 1RMF ILE H 34 GB 2852989 MET 33 CONFLICT SEQADV 1RMF GLU H 39 GB 2852989 GLN 38 CONFLICT SEQADV 1RMF ALA H 53 GB 2852989 THR 52 CONFLICT SEQADV 1RMF SER H 55 GB 2852989 TYR 54 CONFLICT SEQADV 1RMF ASP H 57 GB 2852989 ASN 56 CONFLICT SEQADV 1RMF GLN H 62 GB 2852989 ARG 61 CONFLICT SEQADV 1RMF LYS H 63 GB 2852989 ASN 62 CONFLICT SEQADV 1RMF ASN H 77 GB 2852989 SER 76 CONFLICT SEQADV 1RMF LEU H 81 GB 2852989 MET 80 CONFLICT SEQADV 1RMF GLY H 99 GB 2852989 INSERTION SEQADV 1RMF GLY H 100 GB 2852989 INSERTION SEQADV 1RMF TRP H 101 GB 2852989 INSERTION SEQADV 1RMF LEU H 103 GB 2852989 ASN 99 CONFLICT SEQADV 1RMF H GB 2852989 ASP 101 DELETION SEQADV 1RMF H GB 2852989 GLY 102 DELETION SEQADV 1RMF H GB 2852989 TYR 103 DELETION SEQADV 1RMF H GB 2852989 TYR 104 DELETION SEQADV 1RMF SER H 105 GB 2852989 GLY 105 CONFLICT SEQADV 1RMF ASP H 107 GB 2852989 ALA 107 CONFLICT SEQADV 1RMF THR H 114 GB 2852989 LEU 114 CONFLICT SEQADV 1RMF LEU H 115 GB 2852989 VAL 115 CONFLICT SEQADV 1RMF SER H 119 GB 2852989 ALA 119 CONFLICT SEQADV 1RMF THR H 128 GB 2852989 TYR 128 CONFLICT SEQADV 1RMF VAL H 146 GB 2852989 CYS 146 CONFLICT SEQRES 1 L 219 ASP VAL VAL MET THR GLN SER PRO LEU SER LEU PRO VAL SEQRES 2 L 219 SER LEU GLY ASP GLN ALA SER ILE SER CYS ARG SER SER SEQRES 3 L 219 GLN SER LEU VAL HIS SER ASN GLY ASN ASN TYR LEU HIS SEQRES 4 L 219 TRP TYR LEU GLN LYS SER GLY GLN ALA PRO LYS LEU LEU SEQRES 5 L 219 ILE TYR LYS VAL SER ASN ARG PHE SER GLY VAL PRO ASP SEQRES 6 L 219 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 219 LYS ILE SER ARG VAL GLU ALA GLU ASP LEU GLY VAL TYR SEQRES 8 L 219 PHE CYS SER GLN SER THR HIS VAL PRO LEU THR PHE GLY SEQRES 9 L 219 GLY GLY THR LYS LEU GLU ILE LYS ARG ALA ASP ALA ALA SEQRES 10 L 219 PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU SEQRES 11 L 219 THR SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN SEQRES 12 L 219 PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP SEQRES 13 L 219 GLY SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR SEQRES 14 L 219 ASP GLN ASP SER LYS ASP SER THR TYR SER MET SER SER SEQRES 15 L 219 THR LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SEQRES 16 L 219 SER TYR THR CYS GLU ALA THR HIS LYS THR SER THR SER SEQRES 17 L 219 PRO ILE VAL LYS SER PHE ASN ARG ASN GLU CYS SEQRES 1 H 216 GLN VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL ARG SEQRES 2 H 216 PRO GLY VAL SER VAL LYS ILE SER CYS LYS GLY SER GLY SEQRES 3 H 216 TYR THR PHE ILE ASP TYR ALA ILE HIS TRP VAL LYS GLU SEQRES 4 H 216 SER HIS ALA LYS SER LEU GLU TRP ILE GLY VAL ILE SER SEQRES 5 H 216 ALA TYR SER GLY ASP THR ASN TYR ASN GLN LYS PHE LYS SEQRES 6 H 216 GLY LYS ALA THR MET THR VAL ASP LYS SER SER ASN THR SEQRES 7 H 216 ALA TYR LEU GLU LEU ALA ARG LEU THR SER GLU ASP SER SEQRES 8 H 216 ALA ILE TYR TYR CYS ALA ARG GLY GLY TRP LEU LEU LEU SEQRES 9 H 216 SER PHE ASP TYR TRP GLY GLN GLY THR THR LEU THR VAL SEQRES 10 H 216 SER SER ALA LYS THR THR ALA PRO SER VAL THR PRO LEU SEQRES 11 H 216 ALA PRO VAL CYS GLY ASP THR THR GLY SER SER VAL THR SEQRES 12 H 216 LEU GLY VAL LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL SEQRES 13 H 216 THR LEU THR TRP ASN SER GLY SER LEU SER SER GLY VAL SEQRES 14 H 216 HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR SEQRES 15 H 216 LEU SER SER SER VAL THR VAL THR SER SER THR TRP PRO SEQRES 16 H 216 SER GLN SER ILE THR CYS ASN VAL ALA HIS PRO ALA SER SEQRES 17 H 216 SER THR LYS VAL ASP LYS LYS ILE FORMUL 3 HOH *39(H2 O) HELIX 1 1 ALA L 85 ASP L 87 5 3 HELIX 2 2 SER L 127 LEU L 130 1 4 HELIX 3 3 LYS L 188 ARG L 193 1 6 HELIX 4 4 PHE H 29 ASP H 31 5 3 HELIX 5 5 GLN H 62 PHE H 64 5 3 HELIX 6 6 LYS H 74 SER H 76 5 3 HELIX 7 7 SER H 88 ASP H 90 5 3 HELIX 8 8 ASN H 161 GLY H 163 5 3 HELIX 9 9 SER H 191 THR H 193 5 3 SHEET 1 A 4 MET L 4 SER L 7 0 SHEET 2 A 4 ALA L 19 SER L 25 -1 N ARG L 24 O THR L 5 SHEET 3 A 4 ASP L 75 ILE L 80 -1 N ILE L 80 O ALA L 19 SHEET 4 A 4 PHE L 67 SER L 72 -1 N SER L 72 O ASP L 75 SHEET 1 B 2 SER L 10 VAL L 13 0 SHEET 2 B 2 LYS L 108 ILE L 111 1 N LYS L 108 O LEU L 11 SHEET 1 C 3 VAL L 90 GLN L 95 0 SHEET 2 C 3 LEU L 38 GLN L 43 -1 N GLN L 43 O VAL L 90 SHEET 3 C 3 LYS L 50 LYS L 55 -1 N LYS L 55 O LEU L 38 SHEET 1 D 4 THR L 119 PHE L 123 0 SHEET 2 D 4 GLY L 134 PHE L 144 -1 N ASN L 142 O THR L 119 SHEET 3 D 4 TYR L 178 THR L 187 -1 N LEU L 186 O ALA L 135 SHEET 4 D 4 VAL L 164 TRP L 168 -1 N SER L 167 O SER L 181 SHEET 1 E 3 ASN L 150 ILE L 155 0 SHEET 2 E 3 SER L 196 THR L 202 -1 N THR L 202 O ASN L 150 SHEET 3 E 3 ILE L 210 ASN L 215 -1 N PHE L 214 O TYR L 197 SHEET 1 F 4 GLN H 3 SER H 7 0 SHEET 2 F 4 SER H 17 SER H 25 -1 N SER H 25 O GLN H 3 SHEET 3 F 4 THR H 78 ALA H 84 -1 N LEU H 83 O VAL H 18 SHEET 4 F 4 ALA H 68 THR H 71 -1 N THR H 71 O TYR H 80 SHEET 1 G 2 GLU H 10 VAL H 12 0 SHEET 2 G 2 LEU H 115 VAL H 117 1 N THR H 116 O GLU H 10 SHEET 1 H 3 ILE H 93 ARG H 98 0 SHEET 2 H 3 ILE H 34 GLU H 39 -1 N GLU H 39 O ILE H 93 SHEET 3 H 3 LEU H 45 ILE H 51 -1 N ILE H 51 O ILE H 34 SHEET 1 I 4 SER H 126 LEU H 130 0 SHEET 2 I 4 SER H 141 TYR H 151 -1 N LYS H 149 O SER H 126 SHEET 3 I 4 TYR H 181 THR H 190 -1 N VAL H 189 O VAL H 142 SHEET 4 I 4 VAL H 169 THR H 171 -1 N HIS H 170 O SER H 186 SHEET 1 J 2 THR H 157 TRP H 160 0 SHEET 2 J 2 CYS H 201 ALA H 204 -1 N ALA H 204 O THR H 157 SHEET 1 K 2 VAL H 175 SER H 178 0 SHEET 2 K 2 LEU H 180 THR H 182 -1 N THR H 182 O VAL H 175 SSBOND 1 CYS L 139 CYS L 199 1555 1555 2.34 SSBOND 2 CYS H 22 CYS H 96 1555 1555 2.03 CISPEP 1 SER L 7 PRO L 8 0 14.43 CISPEP 2 VAL L 99 PRO L 100 0 -8.27 CISPEP 3 TYR L 145 PRO L 146 0 -2.81 CISPEP 4 GLY H 8 PRO H 9 0 -11.49 CISPEP 5 PHE H 152 PRO H 153 0 -5.66 CISPEP 6 GLU H 154 PRO H 155 0 -18.61 SITE 1 CL1 16 ARG L 24 SER L 25 SER L 26 GLN L 27 SITE 2 CL1 16 SER L 28 LEU L 29 VAL L 30 HIS L 31 SITE 3 CL1 16 SER L 32 ASN L 33 GLY L 34 ASN L 35 SITE 4 CL1 16 ASN L 36 TYR L 37 LEU L 38 HIS L 39 SITE 1 CL2 7 LYS L 55 VAL L 56 SER L 57 ASN L 58 SITE 2 CL2 7 ARG L 59 PHE L 60 SER L 61 SITE 1 CL3 9 SER L 94 GLN L 95 SER L 96 THR L 97 SITE 2 CL3 9 HIS L 98 VAL L 99 PRO L 100 LEU L 101 SITE 3 CL3 9 THR L 102 SITE 1 CH1 5 ASP H 31 TYR H 32 ALA H 33 ILE H 34 SITE 2 CH1 5 HIS H 35 SITE 1 CH2 17 VAL H 50 ILE H 51 SER H 52 ALA H 53 SITE 2 CH2 17 TYR H 54 SER H 55 GLY H 56 ASP H 57 SITE 3 CH2 17 THR H 58 ASN H 59 TYR H 60 ASN H 61 SITE 4 CH2 17 GLN H 62 LYS H 63 PHE H 64 LYS H 65 SITE 5 CH2 17 GLY H 66 SITE 1 CH3 10 GLY H 99 GLY H 100 TRP H 101 LEU H 102 SITE 2 CH3 10 LEU H 103 LEU H 104 SER H 105 PHE H 106 SITE 3 CH3 10 ASP H 107 TYR H 108 CRYST1 40.360 137.760 91.320 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024777 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007259 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010951 0.00000