data_1RNJ # _entry.id 1RNJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RNJ pdb_00001rnj 10.2210/pdb1rnj/pdb RCSB RCSB020902 ? ? WWPDB D_1000020902 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1RN8 'The same complex with the wild type enzyme.' unspecified PDB 1RO1 'Crystal structure of dUTPase complexed with the high-energy intermediate alfa,beta-aminophosphorane-dUTP' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RNJ _pdbx_database_status.recvd_initial_deposition_date 2003-12-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barabas, O.' 1 'Pongracz, V.' 2 'Kovari, J.' 3 'Wilmanns, M.' 4 'Vertessy, B.G.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural Insights into the Catalytic Mechanism of Phosphate Ester Hydrolysis by dUTPase.' J.Biol.Chem. 279 42907 42915 2004 JBCHA3 US 0021-9258 0071 ? 15208312 10.1074/jbc.M406135200 1 'Atomic resolution structure of Escherichia coli dUTPase determined ab initio' 'Acta Crystallogr.,Sect.D' 57 767 774 2001 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444901004255 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barabas, O.' 1 ? primary 'Pongracz, V.' 2 ? primary 'Kovari, J.' 3 ? primary 'Wilmanns, M.' 4 ? primary 'Vertessy, B.G.' 5 ? 1 'Gonzalez, A.' 6 ? 1 'Larsson, G.' 7 ? 1 'Persson, R.' 8 ? 1 'Cedergren-Zeppezauer, E.' 9 ? # _cell.entry_id 1RNJ _cell.length_a 74.900 _cell.length_b 74.900 _cell.length_c 99.643 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RNJ _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Deoxyuridine 5'-triphosphate nucleotidohydrolase ; 16301.631 1 3.6.1.23 D90N ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; 467.157 1 ? ? ? ? 4 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 2 ? ? ? ? 5 water nat water 18.015 221 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'dUTPase, dUTP pyrophosphatase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGI VLGNLVGLINSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGI VLGNLVGLINSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 MET n 1 3 LYS n 1 4 LYS n 1 5 ILE n 1 6 ASP n 1 7 VAL n 1 8 LYS n 1 9 ILE n 1 10 LEU n 1 11 ASP n 1 12 PRO n 1 13 ARG n 1 14 VAL n 1 15 GLY n 1 16 LYS n 1 17 GLU n 1 18 PHE n 1 19 PRO n 1 20 LEU n 1 21 PRO n 1 22 THR n 1 23 TYR n 1 24 ALA n 1 25 THR n 1 26 SER n 1 27 GLY n 1 28 SER n 1 29 ALA n 1 30 GLY n 1 31 LEU n 1 32 ASP n 1 33 LEU n 1 34 ARG n 1 35 ALA n 1 36 CYS n 1 37 LEU n 1 38 ASN n 1 39 ASP n 1 40 ALA n 1 41 VAL n 1 42 GLU n 1 43 LEU n 1 44 ALA n 1 45 PRO n 1 46 GLY n 1 47 ASP n 1 48 THR n 1 49 THR n 1 50 LEU n 1 51 VAL n 1 52 PRO n 1 53 THR n 1 54 GLY n 1 55 LEU n 1 56 ALA n 1 57 ILE n 1 58 HIS n 1 59 ILE n 1 60 ALA n 1 61 ASP n 1 62 PRO n 1 63 SER n 1 64 LEU n 1 65 ALA n 1 66 ALA n 1 67 MET n 1 68 MET n 1 69 LEU n 1 70 PRO n 1 71 ARG n 1 72 SER n 1 73 GLY n 1 74 LEU n 1 75 GLY n 1 76 HIS n 1 77 LYS n 1 78 HIS n 1 79 GLY n 1 80 ILE n 1 81 VAL n 1 82 LEU n 1 83 GLY n 1 84 ASN n 1 85 LEU n 1 86 VAL n 1 87 GLY n 1 88 LEU n 1 89 ILE n 1 90 ASN n 1 91 SER n 1 92 ASP n 1 93 TYR n 1 94 GLN n 1 95 GLY n 1 96 GLN n 1 97 LEU n 1 98 MET n 1 99 ILE n 1 100 SER n 1 101 VAL n 1 102 TRP n 1 103 ASN n 1 104 ARG n 1 105 GLY n 1 106 GLN n 1 107 ASP n 1 108 SER n 1 109 PHE n 1 110 THR n 1 111 ILE n 1 112 GLN n 1 113 PRO n 1 114 GLY n 1 115 GLU n 1 116 ARG n 1 117 ILE n 1 118 ALA n 1 119 GLN n 1 120 MET n 1 121 ILE n 1 122 PHE n 1 123 VAL n 1 124 PRO n 1 125 VAL n 1 126 VAL n 1 127 GLN n 1 128 ALA n 1 129 GLU n 1 130 PHE n 1 131 ASN n 1 132 LEU n 1 133 VAL n 1 134 GLU n 1 135 ASP n 1 136 PHE n 1 137 ASP n 1 138 ALA n 1 139 THR n 1 140 ASP n 1 141 ARG n 1 142 GLY n 1 143 GLU n 1 144 GLY n 1 145 GLY n 1 146 PHE n 1 147 GLY n 1 148 HIS n 1 149 SER n 1 150 GLY n 1 151 ARG n 1 152 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene 'DUT, DNAS, SOF, B3640' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DUT_ECOLI _struct_ref.pdbx_db_accession P06968 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIV LGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1RNJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06968 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 151 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1RNJ MET A 1 ? UNP P06968 ? ? 'initiating methionine' 1 1 1 1RNJ ASN A 90 ? UNP P06968 ASP 89 'engineered mutation' 90 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DUP non-polymer . ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; ? 'C9 H16 N3 O13 P3' 467.157 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RNJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.3 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details 'PEG 3350, sodium acetate, Tris, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-03-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9392 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9392 # _reflns.entry_id 1RNJ _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 22.0 _reflns.number_all ? _reflns.number_obs 18342 _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI 8.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 20.32 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 98.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.38 _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 20.81 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1268 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1RNJ _refine.ls_number_reflns_obs 17392 _refine.ls_number_reflns_all 17392 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 98.2 _refine.ls_R_factor_obs 0.15812 _refine.ls_R_factor_all 0.18 _refine.ls_R_factor_R_work 0.15654 _refine.ls_R_factor_R_free 0.1872 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 949 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 19.221 _refine.aniso_B[1][1] -0.31 _refine.aniso_B[2][2] -0.31 _refine.aniso_B[3][3] 0.46 _refine.aniso_B[1][2] -0.15 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1EUW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.092 _refine.pdbx_overall_ESU_R_Free 0.091 _refine.overall_SU_ML 0.054 _refine.overall_SU_B 1.624 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1069 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 221 _refine_hist.number_atoms_total 1327 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 1148 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1094 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.537 2.009 ? 1556 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.576 3.000 ? 2546 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.865 5.000 ? 136 'X-RAY DIFFRACTION' ? r_chiral_restr 0.088 0.200 ? 184 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1202 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.005 0.020 ? 208 'X-RAY DIFFRACTION' ? r_nbd_refined 0.182 0.200 ? 176 'X-RAY DIFFRACTION' ? r_nbd_other 0.278 0.200 ? 1126 'X-RAY DIFFRACTION' ? r_nbtor_other 0.094 0.200 ? 606 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.219 0.200 ? 154 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.146 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.150 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.322 0.200 ? 151 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.194 0.200 ? 46 'X-RAY DIFFRACTION' ? r_mcbond_it 2.354 4.000 ? 702 'X-RAY DIFFRACTION' ? r_mcangle_it 4.712 50.000 ? 1138 'X-RAY DIFFRACTION' ? r_scbond_it 7.396 50.000 ? 446 'X-RAY DIFFRACTION' ? r_scangle_it 9.450 50.000 ? 418 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1186 _refine_ls_shell.R_factor_R_work 0.204 _refine_ls_shell.percent_reflns_obs 98.2 _refine_ls_shell.R_factor_R_free 0.272 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.number_reflns_obs 1268 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1RNJ _struct.title 'Crystal structure of inactive mutant dUTPase complexed with substrate analogue imido-dUTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RNJ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Jelly Roll, Enzyme-ligand complex, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ;The biological assembly is a trimer generated from the monomer in the asymmetric unit by the operations: 1-y, x-y, z and 1-x+y, 1-x, z. ; _struct_biol.pdbx_parent_biol_id ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ARG _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 71 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 79 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ARG _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 71 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 79 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C DUP . O1B ? ? ? 1_555 B MG . MG ? ? A DUP 777 A MG 999 1_555 ? ? ? ? ? ? ? 1.885 ? ? metalc2 metalc ? ? C DUP . O1A ? ? ? 1_555 B MG . MG ? ? A DUP 777 A MG 999 1_555 ? ? ? ? ? ? ? 2.022 ? ? metalc3 metalc ? ? C DUP . O2G ? ? ? 1_555 B MG . MG ? ? A DUP 777 A MG 999 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 999 A HOH 1110 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 999 A HOH 1111 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 999 A HOH 1135 1_555 ? ? ? ? ? ? ? 1.811 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 6 ? ILE A 9 ? ASP A 6 ILE A 9 A 2 THR A 48 ? HIS A 58 ? THR A 48 HIS A 58 A 3 GLN A 96 ? ASN A 103 ? GLN A 96 ASN A 103 A 4 ILE A 80 ? LEU A 82 ? ILE A 80 LEU A 82 B 1 LEU A 31 ? ARG A 34 ? LEU A 31 ARG A 34 B 2 ARG A 116 ? PRO A 124 ? ARG A 116 PRO A 124 B 3 LEU A 64 ? LEU A 69 ? LEU A 64 LEU A 69 B 4 GLY A 87 ? ILE A 89 ? GLY A 87 ILE A 89 C 1 VAL A 41 ? LEU A 43 ? VAL A 41 LEU A 43 C 2 PHE A 109 ? ILE A 111 ? PHE A 109 ILE A 111 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 8 ? N LYS A 8 O ALA A 56 ? O ALA A 56 A 2 3 N VAL A 51 ? N VAL A 51 O ILE A 99 ? O ILE A 99 A 3 4 O TRP A 102 ? O TRP A 102 N VAL A 81 ? N VAL A 81 B 1 2 N LEU A 31 ? N LEU A 31 O MET A 120 ? O MET A 120 B 2 3 O GLN A 119 ? O GLN A 119 N LEU A 69 ? N LEU A 69 B 3 4 N ALA A 66 ? N ALA A 66 O ILE A 89 ? O ILE A 89 C 1 2 N LEU A 43 ? N LEU A 43 O PHE A 109 ? O PHE A 109 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 999 ? 4 'BINDING SITE FOR RESIDUE MG A 999' AC2 Software A DUP 777 ? 27 'BINDING SITE FOR RESIDUE DUP A 777' AC3 Software A TRS 801 ? 6 'BINDING SITE FOR RESIDUE TRS A 801' AC4 Software A TRS 802 ? 2 'BINDING SITE FOR RESIDUE TRS A 802' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DUP C . ? DUP A 777 . ? 1_555 ? 2 AC1 4 HOH F . ? HOH A 1110 . ? 1_555 ? 3 AC1 4 HOH F . ? HOH A 1111 . ? 1_555 ? 4 AC1 4 HOH F . ? HOH A 1135 . ? 1_555 ? 5 AC2 27 MET A 68 ? MET A 68 . ? 1_555 ? 6 AC2 27 ARG A 71 ? ARG A 71 . ? 3_665 ? 7 AC2 27 SER A 72 ? SER A 72 . ? 3_665 ? 8 AC2 27 GLY A 73 ? GLY A 73 . ? 3_665 ? 9 AC2 27 ASN A 84 ? ASN A 84 . ? 1_555 ? 10 AC2 27 GLY A 87 ? GLY A 87 . ? 1_555 ? 11 AC2 27 LEU A 88 ? LEU A 88 . ? 1_555 ? 12 AC2 27 ASN A 90 ? ASN A 90 . ? 1_555 ? 13 AC2 27 TYR A 93 ? TYR A 93 . ? 1_555 ? 14 AC2 27 MET A 98 ? MET A 98 . ? 1_555 ? 15 AC2 27 GLN A 119 ? GLN A 119 . ? 3_665 ? 16 AC2 27 MG B . ? MG A 999 . ? 1_555 ? 17 AC2 27 HOH F . ? HOH A 1002 . ? 1_555 ? 18 AC2 27 HOH F . ? HOH A 1004 . ? 1_555 ? 19 AC2 27 HOH F . ? HOH A 1006 . ? 1_555 ? 20 AC2 27 HOH F . ? HOH A 1026 . ? 1_555 ? 21 AC2 27 HOH F . ? HOH A 1033 . ? 1_555 ? 22 AC2 27 HOH F . ? HOH A 1051 . ? 1_555 ? 23 AC2 27 HOH F . ? HOH A 1056 . ? 2_655 ? 24 AC2 27 HOH F . ? HOH A 1064 . ? 1_555 ? 25 AC2 27 HOH F . ? HOH A 1097 . ? 1_555 ? 26 AC2 27 HOH F . ? HOH A 1099 . ? 1_555 ? 27 AC2 27 HOH F . ? HOH A 1110 . ? 1_555 ? 28 AC2 27 HOH F . ? HOH A 1111 . ? 1_555 ? 29 AC2 27 HOH F . ? HOH A 1135 . ? 1_555 ? 30 AC2 27 HOH F . ? HOH A 1161 . ? 8_565 ? 31 AC2 27 HOH F . ? HOH A 1218 . ? 1_555 ? 32 AC3 6 TRP A 102 ? TRP A 102 . ? 1_555 ? 33 AC3 6 TRP A 102 ? TRP A 102 . ? 2_655 ? 34 AC3 6 TRP A 102 ? TRP A 102 . ? 3_665 ? 35 AC3 6 ARG A 104 ? ARG A 104 . ? 1_555 ? 36 AC3 6 HOH F . ? HOH A 1048 . ? 3_665 ? 37 AC3 6 HOH F . ? HOH A 1081 . ? 1_555 ? 38 AC4 2 MET A 1 ? MET A 1 . ? 1_555 ? 39 AC4 2 PRO A 124 ? PRO A 124 . ? 3_665 ? # _database_PDB_matrix.entry_id 1RNJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RNJ _atom_sites.fract_transf_matrix[1][1] 0.013351 _atom_sites.fract_transf_matrix[1][2] 0.007708 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015417 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 MET 2 2 2 MET MET A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 TRP 102 102 102 TRP TRP A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 PHE 136 136 136 PHE PHE A . n A 1 137 ASP 137 137 ? ? ? A . n A 1 138 ALA 138 138 ? ? ? A . n A 1 139 THR 139 139 ? ? ? A . n A 1 140 ASP 140 140 ? ? ? A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 GLY 142 142 ? ? ? A . n A 1 143 GLU 143 143 ? ? ? A . n A 1 144 GLY 144 144 ? ? ? A . n A 1 145 GLY 145 145 ? ? ? A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLY 147 147 ? ? ? A . n A 1 148 HIS 148 148 ? ? ? A . n A 1 149 SER 149 149 ? ? ? A . n A 1 150 GLY 150 150 ? ? ? A . n A 1 151 ARG 151 151 151 ARG ARG A . n A 1 152 GLN 152 152 152 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 999 999 MG MG A . C 3 DUP 1 777 777 DUP UNP A . D 4 TRS 1 801 1 TRS TRS A . E 4 TRS 1 802 2 TRS TRS A . F 5 HOH 1 1000 1 HOH HOH A . F 5 HOH 2 1001 2 HOH HOH A . F 5 HOH 3 1002 3 HOH HOH A . F 5 HOH 4 1003 4 HOH HOH A . F 5 HOH 5 1004 5 HOH HOH A . F 5 HOH 6 1005 6 HOH HOH A . F 5 HOH 7 1006 7 HOH HOH A . F 5 HOH 8 1007 8 HOH HOH A . F 5 HOH 9 1008 9 HOH HOH A . F 5 HOH 10 1009 10 HOH HOH A . F 5 HOH 11 1010 11 HOH HOH A . F 5 HOH 12 1011 12 HOH HOH A . F 5 HOH 13 1012 13 HOH HOH A . F 5 HOH 14 1013 14 HOH HOH A . F 5 HOH 15 1014 15 HOH HOH A . F 5 HOH 16 1015 16 HOH HOH A . F 5 HOH 17 1016 17 HOH HOH A . F 5 HOH 18 1017 18 HOH HOH A . F 5 HOH 19 1018 19 HOH HOH A . F 5 HOH 20 1019 20 HOH HOH A . F 5 HOH 21 1020 21 HOH HOH A . F 5 HOH 22 1021 22 HOH HOH A . F 5 HOH 23 1022 23 HOH HOH A . F 5 HOH 24 1023 24 HOH HOH A . F 5 HOH 25 1024 25 HOH HOH A . F 5 HOH 26 1025 26 HOH HOH A . F 5 HOH 27 1026 27 HOH HOH A . F 5 HOH 28 1027 28 HOH HOH A . F 5 HOH 29 1028 29 HOH HOH A . F 5 HOH 30 1029 30 HOH HOH A . F 5 HOH 31 1030 31 HOH HOH A . F 5 HOH 32 1031 32 HOH HOH A . F 5 HOH 33 1032 33 HOH HOH A . F 5 HOH 34 1033 34 HOH HOH A . F 5 HOH 35 1034 35 HOH HOH A . F 5 HOH 36 1035 36 HOH HOH A . F 5 HOH 37 1036 37 HOH HOH A . F 5 HOH 38 1037 38 HOH HOH A . F 5 HOH 39 1038 39 HOH HOH A . F 5 HOH 40 1039 40 HOH HOH A . F 5 HOH 41 1040 41 HOH HOH A . F 5 HOH 42 1041 42 HOH HOH A . F 5 HOH 43 1042 43 HOH HOH A . F 5 HOH 44 1043 44 HOH HOH A . F 5 HOH 45 1044 45 HOH HOH A . F 5 HOH 46 1045 46 HOH HOH A . F 5 HOH 47 1046 47 HOH HOH A . F 5 HOH 48 1047 48 HOH HOH A . F 5 HOH 49 1048 49 HOH HOH A . F 5 HOH 50 1049 50 HOH HOH A . F 5 HOH 51 1050 51 HOH HOH A . F 5 HOH 52 1051 52 HOH HOH A . F 5 HOH 53 1052 53 HOH HOH A . F 5 HOH 54 1053 54 HOH HOH A . F 5 HOH 55 1054 55 HOH HOH A . F 5 HOH 56 1055 56 HOH HOH A . F 5 HOH 57 1056 57 HOH HOH A . F 5 HOH 58 1057 58 HOH HOH A . F 5 HOH 59 1058 59 HOH HOH A . F 5 HOH 60 1059 60 HOH HOH A . F 5 HOH 61 1060 61 HOH HOH A . F 5 HOH 62 1061 62 HOH HOH A . F 5 HOH 63 1062 63 HOH HOH A . F 5 HOH 64 1063 64 HOH HOH A . F 5 HOH 65 1064 65 HOH HOH A . F 5 HOH 66 1065 66 HOH HOH A . F 5 HOH 67 1066 67 HOH HOH A . F 5 HOH 68 1067 68 HOH HOH A . F 5 HOH 69 1068 69 HOH HOH A . F 5 HOH 70 1069 70 HOH HOH A . F 5 HOH 71 1070 71 HOH HOH A . F 5 HOH 72 1071 72 HOH HOH A . F 5 HOH 73 1072 73 HOH HOH A . F 5 HOH 74 1073 74 HOH HOH A . F 5 HOH 75 1074 75 HOH HOH A . F 5 HOH 76 1075 76 HOH HOH A . F 5 HOH 77 1076 77 HOH HOH A . F 5 HOH 78 1077 78 HOH HOH A . F 5 HOH 79 1078 79 HOH HOH A . F 5 HOH 80 1079 80 HOH HOH A . F 5 HOH 81 1080 81 HOH HOH A . F 5 HOH 82 1081 82 HOH HOH A . F 5 HOH 83 1082 83 HOH HOH A . F 5 HOH 84 1083 84 HOH HOH A . F 5 HOH 85 1084 85 HOH HOH A . F 5 HOH 86 1085 86 HOH HOH A . F 5 HOH 87 1086 87 HOH HOH A . F 5 HOH 88 1087 88 HOH HOH A . F 5 HOH 89 1088 89 HOH HOH A . F 5 HOH 90 1089 90 HOH HOH A . F 5 HOH 91 1090 91 HOH HOH A . F 5 HOH 92 1091 92 HOH HOH A . F 5 HOH 93 1092 93 HOH HOH A . F 5 HOH 94 1093 94 HOH HOH A . F 5 HOH 95 1094 95 HOH HOH A . F 5 HOH 96 1095 96 HOH HOH A . F 5 HOH 97 1096 97 HOH HOH A . F 5 HOH 98 1097 98 HOH HOH A . F 5 HOH 99 1098 99 HOH HOH A . F 5 HOH 100 1099 100 HOH HOH A . F 5 HOH 101 1100 101 HOH HOH A . F 5 HOH 102 1101 102 HOH HOH A . F 5 HOH 103 1102 103 HOH HOH A . F 5 HOH 104 1103 104 HOH HOH A . F 5 HOH 105 1104 105 HOH HOH A . F 5 HOH 106 1105 106 HOH HOH A . F 5 HOH 107 1106 107 HOH HOH A . F 5 HOH 108 1107 108 HOH HOH A . F 5 HOH 109 1108 109 HOH HOH A . F 5 HOH 110 1109 110 HOH HOH A . F 5 HOH 111 1110 111 HOH HOH A . F 5 HOH 112 1111 112 HOH HOH A . F 5 HOH 113 1112 113 HOH HOH A . F 5 HOH 114 1113 114 HOH HOH A . F 5 HOH 115 1114 115 HOH HOH A . F 5 HOH 116 1115 116 HOH HOH A . F 5 HOH 117 1116 117 HOH HOH A . F 5 HOH 118 1117 118 HOH HOH A . F 5 HOH 119 1118 119 HOH HOH A . F 5 HOH 120 1119 120 HOH HOH A . F 5 HOH 121 1120 121 HOH HOH A . F 5 HOH 122 1121 122 HOH HOH A . F 5 HOH 123 1122 123 HOH HOH A . F 5 HOH 124 1123 124 HOH HOH A . F 5 HOH 125 1124 125 HOH HOH A . F 5 HOH 126 1125 126 HOH HOH A . F 5 HOH 127 1126 127 HOH HOH A . F 5 HOH 128 1127 128 HOH HOH A . F 5 HOH 129 1128 129 HOH HOH A . F 5 HOH 130 1129 130 HOH HOH A . F 5 HOH 131 1130 131 HOH HOH A . F 5 HOH 132 1131 132 HOH HOH A . F 5 HOH 133 1132 133 HOH HOH A . F 5 HOH 134 1133 134 HOH HOH A . F 5 HOH 135 1134 136 HOH HOH A . F 5 HOH 136 1135 137 HOH HOH A . F 5 HOH 137 1136 139 HOH HOH A . F 5 HOH 138 1137 140 HOH HOH A . F 5 HOH 139 1138 143 HOH HOH A . F 5 HOH 140 1139 144 HOH HOH A . F 5 HOH 141 1140 145 HOH HOH A . F 5 HOH 142 1141 146 HOH HOH A . F 5 HOH 143 1142 147 HOH HOH A . F 5 HOH 144 1143 148 HOH HOH A . F 5 HOH 145 1144 150 HOH HOH A . F 5 HOH 146 1145 151 HOH HOH A . F 5 HOH 147 1146 153 HOH HOH A . F 5 HOH 148 1147 154 HOH HOH A . F 5 HOH 149 1148 155 HOH HOH A . F 5 HOH 150 1149 156 HOH HOH A . F 5 HOH 151 1150 157 HOH HOH A . F 5 HOH 152 1151 158 HOH HOH A . F 5 HOH 153 1152 159 HOH HOH A . F 5 HOH 154 1153 160 HOH HOH A . F 5 HOH 155 1154 161 HOH HOH A . F 5 HOH 156 1155 162 HOH HOH A . F 5 HOH 157 1156 163 HOH HOH A . F 5 HOH 158 1157 164 HOH HOH A . F 5 HOH 159 1158 166 HOH HOH A . F 5 HOH 160 1159 167 HOH HOH A . F 5 HOH 161 1160 168 HOH HOH A . F 5 HOH 162 1161 169 HOH HOH A . F 5 HOH 163 1162 170 HOH HOH A . F 5 HOH 164 1163 171 HOH HOH A . F 5 HOH 165 1164 172 HOH HOH A . F 5 HOH 166 1165 173 HOH HOH A . F 5 HOH 167 1166 174 HOH HOH A . F 5 HOH 168 1167 175 HOH HOH A . F 5 HOH 169 1168 176 HOH HOH A . F 5 HOH 170 1169 177 HOH HOH A . F 5 HOH 171 1170 178 HOH HOH A . F 5 HOH 172 1171 181 HOH HOH A . F 5 HOH 173 1172 184 HOH HOH A . F 5 HOH 174 1173 185 HOH HOH A . F 5 HOH 175 1174 186 HOH HOH A . F 5 HOH 176 1175 187 HOH HOH A . F 5 HOH 177 1176 190 HOH HOH A . F 5 HOH 178 1177 191 HOH HOH A . F 5 HOH 179 1178 192 HOH HOH A . F 5 HOH 180 1179 193 HOH HOH A . F 5 HOH 181 1180 195 HOH HOH A . F 5 HOH 182 1181 200 HOH HOH A . F 5 HOH 183 1182 201 HOH HOH A . F 5 HOH 184 1183 203 HOH HOH A . F 5 HOH 185 1184 204 HOH HOH A . F 5 HOH 186 1185 207 HOH HOH A . F 5 HOH 187 1186 208 HOH HOH A . F 5 HOH 188 1187 210 HOH HOH A . F 5 HOH 189 1188 211 HOH HOH A . F 5 HOH 190 1189 212 HOH HOH A . F 5 HOH 191 1190 214 HOH HOH A . F 5 HOH 192 1191 215 HOH HOH A . F 5 HOH 193 1192 216 HOH HOH A . F 5 HOH 194 1193 217 HOH HOH A . F 5 HOH 195 1194 219 HOH HOH A . F 5 HOH 196 1195 223 HOH HOH A . F 5 HOH 197 1196 228 HOH HOH A . F 5 HOH 198 1197 231 HOH HOH A . F 5 HOH 199 1198 232 HOH HOH A . F 5 HOH 200 1199 233 HOH HOH A . F 5 HOH 201 1200 234 HOH HOH A . F 5 HOH 202 1201 235 HOH HOH A . F 5 HOH 203 1202 236 HOH HOH A . F 5 HOH 204 1203 238 HOH HOH A . F 5 HOH 205 1204 240 HOH HOH A . F 5 HOH 206 1205 243 HOH HOH A . F 5 HOH 207 1206 245 HOH HOH A . F 5 HOH 208 1207 248 HOH HOH A . F 5 HOH 209 1208 249 HOH HOH A . F 5 HOH 210 1209 251 HOH HOH A . F 5 HOH 211 1210 258 HOH HOH A . F 5 HOH 212 1211 260 HOH HOH A . F 5 HOH 213 1212 262 HOH HOH A . F 5 HOH 214 1213 266 HOH HOH A . F 5 HOH 215 1214 271 HOH HOH A . F 5 HOH 216 1215 274 HOH HOH A . F 5 HOH 217 1216 279 HOH HOH A . F 5 HOH 218 1217 280 HOH HOH A . F 5 HOH 219 1218 281 HOH HOH A . F 5 HOH 220 1219 284 HOH HOH A . F 5 HOH 221 1220 290 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 16830 ? 1 MORE -115 ? 1 'SSA (A^2)' 15870 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 74.9000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 37.4500000000 -0.8660254038 -0.5000000000 0.0000000000 64.8653027435 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A TRS 801 ? D TRS . 2 1 A HOH 1117 ? F HOH . 3 1 A HOH 1171 ? F HOH . 4 1 A HOH 1194 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1B ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O1A ? C DUP . ? A DUP 777 ? 1_555 93.3 ? 2 O1B ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O2G ? C DUP . ? A DUP 777 ? 1_555 90.9 ? 3 O1A ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O2G ? C DUP . ? A DUP 777 ? 1_555 95.5 ? 4 O1B ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1110 ? 1_555 96.4 ? 5 O1A ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1110 ? 1_555 87.3 ? 6 O2G ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1110 ? 1_555 171.9 ? 7 O1B ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1111 ? 1_555 92.7 ? 8 O1A ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1111 ? 1_555 168.9 ? 9 O2G ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1111 ? 1_555 93.6 ? 10 O ? F HOH . ? A HOH 1110 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1111 ? 1_555 82.8 ? 11 O1B ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1135 ? 1_555 176.9 ? 12 O1A ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1135 ? 1_555 83.8 ? 13 O2G ? C DUP . ? A DUP 777 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1135 ? 1_555 90.4 ? 14 O ? F HOH . ? A HOH 1110 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1135 ? 1_555 82.4 ? 15 O ? F HOH . ? A HOH 1111 ? 1_555 MG ? B MG . ? A MG 999 ? 1_555 O ? F HOH . ? A HOH 1135 ? 1_555 90.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-07 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' pdbx_struct_special_symmetry 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.value' 6 4 'Structure model' '_struct_conn.pdbx_dist_value' 7 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 4 'Structure model' '_struct_ref_seq_dif.details' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MOSFLM 'data reduction' . ? 2 CCP4 'data scaling' '(SCALA)' ? 3 MOLREP phasing . ? 4 # _pdbx_database_remark.id 600 _pdbx_database_remark.text ;HETEROGEN THE TRIS MOLECULES (TRS), WHICH HAVE INHERENT THREEFOLD SYMMETRY, ARE LOCATED ON A CRYSTALLOGRAPHIC THREEFOLD AXIS IN THE PRESENT STRUCTURE. IN AN ASYMMETRIC UNIT THERE IS ONLY ONE THIRD OF THE MOLECULES AND THE COMPLETE MOLECULES ARE BUILT BY THREEFOLD CRYSTALLOGRAPHIC SYMMETRY IN THE CRYSTAL. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 1045 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1206 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MET _pdbx_validate_rmsd_bond.auth_seq_id_1 120 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MET _pdbx_validate_rmsd_bond.auth_seq_id_2 120 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.432 _pdbx_validate_rmsd_bond.bond_target_value 1.774 _pdbx_validate_rmsd_bond.bond_deviation -0.342 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.056 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 16 ? ? -128.76 -101.29 2 1 ALA A 60 ? ? 74.41 -36.02 3 1 LEU A 85 ? ? 74.24 -63.28 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A TRS 801 ? C1 ? D TRS 1 C1 2 1 N 1 A TRS 801 ? C2 ? D TRS 1 C2 3 1 N 1 A TRS 801 ? O1 ? D TRS 1 O1 4 1 N 1 A TRS 801 ? O2 ? D TRS 1 O2 5 1 N 1 A TRS 802 ? C1 ? E TRS 1 C1 6 1 N 1 A TRS 802 ? C3 ? E TRS 1 C3 7 1 N 1 A TRS 802 ? O1 ? E TRS 1 O1 8 1 N 1 A TRS 802 ? O3 ? E TRS 1 O3 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 137 ? A ASP 137 2 1 Y 1 A ALA 138 ? A ALA 138 3 1 Y 1 A THR 139 ? A THR 139 4 1 Y 1 A ASP 140 ? A ASP 140 5 1 Y 1 A GLY 142 ? A GLY 142 6 1 Y 1 A GLU 143 ? A GLU 143 7 1 Y 1 A GLY 144 ? A GLY 144 8 1 Y 1 A GLY 145 ? A GLY 145 9 1 Y 1 A GLY 147 ? A GLY 147 10 1 Y 1 A HIS 148 ? A HIS 148 11 1 Y 1 A SER 149 ? A SER 149 12 1 Y 1 A GLY 150 ? A GLY 150 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DUP O4 O N N 88 DUP C4 C Y N 89 DUP C5 C Y N 90 DUP C6 C Y N 91 DUP N3 N Y N 92 DUP C2 C Y N 93 DUP O2 O N N 94 DUP N1 N Y N 95 DUP "C1'" C N R 96 DUP "C2'" C N N 97 DUP "C3'" C N S 98 DUP "O3'" O N N 99 DUP "O4'" O N N 100 DUP "C4'" C N R 101 DUP "C5'" C N N 102 DUP "O5'" O N N 103 DUP PA P N S 104 DUP O1A O N N 105 DUP O2A O N N 106 DUP N3A N N N 107 DUP PB P N R 108 DUP O1B O N N 109 DUP O2B O N N 110 DUP O3B O N N 111 DUP PG P N N 112 DUP O2G O N N 113 DUP O1G O N N 114 DUP O3G O N N 115 DUP H5 H N N 116 DUP H6 H N N 117 DUP HN3 H N N 118 DUP "H1'" H N N 119 DUP "H2'1" H N N 120 DUP "H2'2" H N N 121 DUP H1 H N N 122 DUP "H3'" H N N 123 DUP "H4'" H N N 124 DUP "H5'1" H N N 125 DUP "H5'2" H N N 126 DUP H2A H N N 127 DUP H3A H N N 128 DUP H2B H N N 129 DUP H1G H N N 130 DUP H3G H N N 131 GLN N N N N 132 GLN CA C N S 133 GLN C C N N 134 GLN O O N N 135 GLN CB C N N 136 GLN CG C N N 137 GLN CD C N N 138 GLN OE1 O N N 139 GLN NE2 N N N 140 GLN OXT O N N 141 GLN H H N N 142 GLN H2 H N N 143 GLN HA H N N 144 GLN HB2 H N N 145 GLN HB3 H N N 146 GLN HG2 H N N 147 GLN HG3 H N N 148 GLN HE21 H N N 149 GLN HE22 H N N 150 GLN HXT H N N 151 GLU N N N N 152 GLU CA C N S 153 GLU C C N N 154 GLU O O N N 155 GLU CB C N N 156 GLU CG C N N 157 GLU CD C N N 158 GLU OE1 O N N 159 GLU OE2 O N N 160 GLU OXT O N N 161 GLU H H N N 162 GLU H2 H N N 163 GLU HA H N N 164 GLU HB2 H N N 165 GLU HB3 H N N 166 GLU HG2 H N N 167 GLU HG3 H N N 168 GLU HE2 H N N 169 GLU HXT H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 HIS N N N N 181 HIS CA C N S 182 HIS C C N N 183 HIS O O N N 184 HIS CB C N N 185 HIS CG C Y N 186 HIS ND1 N Y N 187 HIS CD2 C Y N 188 HIS CE1 C Y N 189 HIS NE2 N Y N 190 HIS OXT O N N 191 HIS H H N N 192 HIS H2 H N N 193 HIS HA H N N 194 HIS HB2 H N N 195 HIS HB3 H N N 196 HIS HD1 H N N 197 HIS HD2 H N N 198 HIS HE1 H N N 199 HIS HE2 H N N 200 HIS HXT H N N 201 HOH O O N N 202 HOH H1 H N N 203 HOH H2 H N N 204 ILE N N N N 205 ILE CA C N S 206 ILE C C N N 207 ILE O O N N 208 ILE CB C N S 209 ILE CG1 C N N 210 ILE CG2 C N N 211 ILE CD1 C N N 212 ILE OXT O N N 213 ILE H H N N 214 ILE H2 H N N 215 ILE HA H N N 216 ILE HB H N N 217 ILE HG12 H N N 218 ILE HG13 H N N 219 ILE HG21 H N N 220 ILE HG22 H N N 221 ILE HG23 H N N 222 ILE HD11 H N N 223 ILE HD12 H N N 224 ILE HD13 H N N 225 ILE HXT H N N 226 LEU N N N N 227 LEU CA C N S 228 LEU C C N N 229 LEU O O N N 230 LEU CB C N N 231 LEU CG C N N 232 LEU CD1 C N N 233 LEU CD2 C N N 234 LEU OXT O N N 235 LEU H H N N 236 LEU H2 H N N 237 LEU HA H N N 238 LEU HB2 H N N 239 LEU HB3 H N N 240 LEU HG H N N 241 LEU HD11 H N N 242 LEU HD12 H N N 243 LEU HD13 H N N 244 LEU HD21 H N N 245 LEU HD22 H N N 246 LEU HD23 H N N 247 LEU HXT H N N 248 LYS N N N N 249 LYS CA C N S 250 LYS C C N N 251 LYS O O N N 252 LYS CB C N N 253 LYS CG C N N 254 LYS CD C N N 255 LYS CE C N N 256 LYS NZ N N N 257 LYS OXT O N N 258 LYS H H N N 259 LYS H2 H N N 260 LYS HA H N N 261 LYS HB2 H N N 262 LYS HB3 H N N 263 LYS HG2 H N N 264 LYS HG3 H N N 265 LYS HD2 H N N 266 LYS HD3 H N N 267 LYS HE2 H N N 268 LYS HE3 H N N 269 LYS HZ1 H N N 270 LYS HZ2 H N N 271 LYS HZ3 H N N 272 LYS HXT H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 MG MG MG N N 294 PHE N N N N 295 PHE CA C N S 296 PHE C C N N 297 PHE O O N N 298 PHE CB C N N 299 PHE CG C Y N 300 PHE CD1 C Y N 301 PHE CD2 C Y N 302 PHE CE1 C Y N 303 PHE CE2 C Y N 304 PHE CZ C Y N 305 PHE OXT O N N 306 PHE H H N N 307 PHE H2 H N N 308 PHE HA H N N 309 PHE HB2 H N N 310 PHE HB3 H N N 311 PHE HD1 H N N 312 PHE HD2 H N N 313 PHE HE1 H N N 314 PHE HE2 H N N 315 PHE HZ H N N 316 PHE HXT H N N 317 PRO N N N N 318 PRO CA C N S 319 PRO C C N N 320 PRO O O N N 321 PRO CB C N N 322 PRO CG C N N 323 PRO CD C N N 324 PRO OXT O N N 325 PRO H H N N 326 PRO HA H N N 327 PRO HB2 H N N 328 PRO HB3 H N N 329 PRO HG2 H N N 330 PRO HG3 H N N 331 PRO HD2 H N N 332 PRO HD3 H N N 333 PRO HXT H N N 334 SER N N N N 335 SER CA C N S 336 SER C C N N 337 SER O O N N 338 SER CB C N N 339 SER OG O N N 340 SER OXT O N N 341 SER H H N N 342 SER H2 H N N 343 SER HA H N N 344 SER HB2 H N N 345 SER HB3 H N N 346 SER HG H N N 347 SER HXT H N N 348 THR N N N N 349 THR CA C N S 350 THR C C N N 351 THR O O N N 352 THR CB C N R 353 THR OG1 O N N 354 THR CG2 C N N 355 THR OXT O N N 356 THR H H N N 357 THR H2 H N N 358 THR HA H N N 359 THR HB H N N 360 THR HG1 H N N 361 THR HG21 H N N 362 THR HG22 H N N 363 THR HG23 H N N 364 THR HXT H N N 365 TRP N N N N 366 TRP CA C N S 367 TRP C C N N 368 TRP O O N N 369 TRP CB C N N 370 TRP CG C Y N 371 TRP CD1 C Y N 372 TRP CD2 C Y N 373 TRP NE1 N Y N 374 TRP CE2 C Y N 375 TRP CE3 C Y N 376 TRP CZ2 C Y N 377 TRP CZ3 C Y N 378 TRP CH2 C Y N 379 TRP OXT O N N 380 TRP H H N N 381 TRP H2 H N N 382 TRP HA H N N 383 TRP HB2 H N N 384 TRP HB3 H N N 385 TRP HD1 H N N 386 TRP HE1 H N N 387 TRP HE3 H N N 388 TRP HZ2 H N N 389 TRP HZ3 H N N 390 TRP HH2 H N N 391 TRP HXT H N N 392 TRS C C N N 393 TRS C1 C N N 394 TRS C2 C N N 395 TRS C3 C N N 396 TRS N N N N 397 TRS O1 O N N 398 TRS O2 O N N 399 TRS O3 O N N 400 TRS H11 H N N 401 TRS H12 H N N 402 TRS H21 H N N 403 TRS H22 H N N 404 TRS H31 H N N 405 TRS H32 H N N 406 TRS HN1 H N N 407 TRS HN2 H N N 408 TRS HN3 H N N 409 TRS HO1 H N N 410 TRS HO2 H N N 411 TRS HO3 H N N 412 TYR N N N N 413 TYR CA C N S 414 TYR C C N N 415 TYR O O N N 416 TYR CB C N N 417 TYR CG C Y N 418 TYR CD1 C Y N 419 TYR CD2 C Y N 420 TYR CE1 C Y N 421 TYR CE2 C Y N 422 TYR CZ C Y N 423 TYR OH O N N 424 TYR OXT O N N 425 TYR H H N N 426 TYR H2 H N N 427 TYR HA H N N 428 TYR HB2 H N N 429 TYR HB3 H N N 430 TYR HD1 H N N 431 TYR HD2 H N N 432 TYR HE1 H N N 433 TYR HE2 H N N 434 TYR HH H N N 435 TYR HXT H N N 436 VAL N N N N 437 VAL CA C N S 438 VAL C C N N 439 VAL O O N N 440 VAL CB C N N 441 VAL CG1 C N N 442 VAL CG2 C N N 443 VAL OXT O N N 444 VAL H H N N 445 VAL H2 H N N 446 VAL HA H N N 447 VAL HB H N N 448 VAL HG11 H N N 449 VAL HG12 H N N 450 VAL HG13 H N N 451 VAL HG21 H N N 452 VAL HG22 H N N 453 VAL HG23 H N N 454 VAL HXT H N N 455 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DUP O4 C4 doub N N 83 DUP C4 C5 sing Y N 84 DUP C4 N3 sing Y N 85 DUP C5 C6 doub Y N 86 DUP C5 H5 sing N N 87 DUP C6 N1 sing Y N 88 DUP C6 H6 sing N N 89 DUP N3 C2 sing Y N 90 DUP N3 HN3 sing N N 91 DUP C2 O2 doub N N 92 DUP C2 N1 sing Y N 93 DUP N1 "C1'" sing N N 94 DUP "C1'" "C2'" sing N N 95 DUP "C1'" "O4'" sing N N 96 DUP "C1'" "H1'" sing N N 97 DUP "C2'" "C3'" sing N N 98 DUP "C2'" "H2'1" sing N N 99 DUP "C2'" "H2'2" sing N N 100 DUP "C3'" "O3'" sing N N 101 DUP "C3'" "C4'" sing N N 102 DUP "C3'" H1 sing N N 103 DUP "O3'" "H3'" sing N N 104 DUP "O4'" "C4'" sing N N 105 DUP "C4'" "C5'" sing N N 106 DUP "C4'" "H4'" sing N N 107 DUP "C5'" "O5'" sing N N 108 DUP "C5'" "H5'1" sing N N 109 DUP "C5'" "H5'2" sing N N 110 DUP "O5'" PA sing N N 111 DUP PA O1A doub N N 112 DUP PA O2A sing N N 113 DUP PA N3A sing N N 114 DUP O2A H2A sing N N 115 DUP N3A PB sing N N 116 DUP N3A H3A sing N N 117 DUP PB O1B doub N N 118 DUP PB O2B sing N N 119 DUP PB O3B sing N N 120 DUP O2B H2B sing N N 121 DUP O3B PG sing N N 122 DUP PG O2G doub N N 123 DUP PG O1G sing N N 124 DUP PG O3G sing N N 125 DUP O1G H1G sing N N 126 DUP O3G H3G sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TRS C C1 sing N N 379 TRS C C2 sing N N 380 TRS C C3 sing N N 381 TRS C N sing N N 382 TRS C1 O1 sing N N 383 TRS C1 H11 sing N N 384 TRS C1 H12 sing N N 385 TRS C2 O2 sing N N 386 TRS C2 H21 sing N N 387 TRS C2 H22 sing N N 388 TRS C3 O3 sing N N 389 TRS C3 H31 sing N N 390 TRS C3 H32 sing N N 391 TRS N HN1 sing N N 392 TRS N HN2 sing N N 393 TRS N HN3 sing N N 394 TRS O1 HO1 sing N N 395 TRS O2 HO2 sing N N 396 TRS O3 HO3 sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 ;2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE ; DUP 4 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EUW _pdbx_initial_refinement_model.details 'PDB ENTRY 1EUW' #