data_1RPU # _entry.id 1RPU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RPU pdb_00001rpu 10.2210/pdb1rpu/pdb NDB PR0109 ? ? RCSB RCSB020934 ? ? WWPDB D_1000020934 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-01-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RPU _pdbx_database_status.recvd_initial_deposition_date 2003-12-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vargason, J.M.' 1 'Szittya, G.' 2 'Burgyan, J.' 3 'Hall, T.M.T.' 4 # _citation.id primary _citation.title 'Size selective recognition of siRNA by an RNA silencing suppressor' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 115 _citation.page_first 799 _citation.page_last 811 _citation.year 2003 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14697199 _citation.pdbx_database_id_DOI '10.1016/S0092-8674(03)00984-X' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vargason, J.M.' 1 ? primary 'Szittya, G.' 2 ? primary 'Burgyan, J.' 3 ? primary 'Hall, T.M.T.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*UP*CP*AP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3'" 6680.997 2 ? ? ? ? 2 polymer man '19 kDa protein' 19358.373 2 ? ? ? ? 3 water nat water 18.015 111 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGUACGCGUCACGCGUACGUU CGUACGCGUCACGCGUACGUU C,D ? 2 'polypeptide(L)' no no ;MERAIQGNDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTE ASLHRVLGSWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTPVEVESNVSRGC PEGIETFKKESE ; ;MERAIQGNDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTE ASLHRVLGSWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTPVEVESNVSRGC PEGIETFKKESE ; A,B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 U n 1 4 A n 1 5 C n 1 6 G n 1 7 C n 1 8 G n 1 9 U n 1 10 C n 1 11 A n 1 12 C n 1 13 G n 1 14 C n 1 15 G n 1 16 U n 1 17 A n 1 18 C n 1 19 G n 1 20 U n 1 21 U n 2 1 MET n 2 2 GLU n 2 3 ARG n 2 4 ALA n 2 5 ILE n 2 6 GLN n 2 7 GLY n 2 8 ASN n 2 9 ASP n 2 10 THR n 2 11 ARG n 2 12 GLU n 2 13 GLN n 2 14 ALA n 2 15 ASN n 2 16 GLY n 2 17 GLU n 2 18 ARG n 2 19 TRP n 2 20 ASP n 2 21 GLY n 2 22 GLY n 2 23 SER n 2 24 GLY n 2 25 GLY n 2 26 ILE n 2 27 THR n 2 28 SER n 2 29 PRO n 2 30 PHE n 2 31 LYS n 2 32 LEU n 2 33 PRO n 2 34 ASP n 2 35 GLU n 2 36 SER n 2 37 PRO n 2 38 SER n 2 39 TRP n 2 40 THR n 2 41 GLU n 2 42 TRP n 2 43 ARG n 2 44 LEU n 2 45 TYR n 2 46 ASN n 2 47 ASP n 2 48 GLU n 2 49 THR n 2 50 ASN n 2 51 SER n 2 52 ASN n 2 53 GLN n 2 54 ASP n 2 55 ASN n 2 56 PRO n 2 57 LEU n 2 58 GLY n 2 59 PHE n 2 60 LYS n 2 61 GLU n 2 62 SER n 2 63 TRP n 2 64 GLY n 2 65 PHE n 2 66 GLY n 2 67 LYS n 2 68 VAL n 2 69 VAL n 2 70 PHE n 2 71 LYS n 2 72 ARG n 2 73 TYR n 2 74 LEU n 2 75 ARG n 2 76 TYR n 2 77 ASP n 2 78 ARG n 2 79 THR n 2 80 GLU n 2 81 ALA n 2 82 SER n 2 83 LEU n 2 84 HIS n 2 85 ARG n 2 86 VAL n 2 87 LEU n 2 88 GLY n 2 89 SER n 2 90 TRP n 2 91 THR n 2 92 GLY n 2 93 ASP n 2 94 SER n 2 95 VAL n 2 96 ASN n 2 97 TYR n 2 98 ALA n 2 99 ALA n 2 100 SER n 2 101 ARG n 2 102 PHE n 2 103 LEU n 2 104 GLY n 2 105 ALA n 2 106 ASN n 2 107 GLN n 2 108 VAL n 2 109 GLY n 2 110 CYS n 2 111 THR n 2 112 TYR n 2 113 SER n 2 114 ILE n 2 115 ARG n 2 116 PHE n 2 117 ARG n 2 118 GLY n 2 119 VAL n 2 120 SER n 2 121 VAL n 2 122 THR n 2 123 ILE n 2 124 SER n 2 125 GLY n 2 126 GLY n 2 127 SER n 2 128 ARG n 2 129 THR n 2 130 LEU n 2 131 GLN n 2 132 HIS n 2 133 LEU n 2 134 CYS n 2 135 GLU n 2 136 MET n 2 137 ALA n 2 138 ILE n 2 139 ARG n 2 140 SER n 2 141 LYS n 2 142 GLN n 2 143 GLU n 2 144 LEU n 2 145 LEU n 2 146 GLN n 2 147 LEU n 2 148 THR n 2 149 PRO n 2 150 VAL n 2 151 GLU n 2 152 VAL n 2 153 GLU n 2 154 SER n 2 155 ASN n 2 156 VAL n 2 157 SER n 2 158 ARG n 2 159 GLY n 2 160 CYS n 2 161 PRO n 2 162 GLU n 2 163 GLY n 2 164 ILE n 2 165 GLU n 2 166 THR n 2 167 PHE n 2 168 LYS n 2 169 LYS n 2 170 GLU n 2 171 SER n 2 172 GLU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Tombusvirus _entity_src_gen.pdbx_gene_src_gene p19 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Carnation Italian ringspot virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 39443 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX2T _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthesized by Dharmacon' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C C . n A 1 2 G 2 2 2 G G C . n A 1 3 U 3 3 3 U U C . n A 1 4 A 4 4 4 A A C . n A 1 5 C 5 5 5 C C C . n A 1 6 G 6 6 6 G G C . n A 1 7 C 7 7 7 C C C . n A 1 8 G 8 8 8 G G C . n A 1 9 U 9 9 9 U U C . n A 1 10 C 10 10 10 C C C . n A 1 11 A 11 11 11 A A C . n A 1 12 C 12 12 12 C C C . n A 1 13 G 13 13 13 G G C . n A 1 14 C 14 14 14 C C C . n A 1 15 G 15 15 15 G G C . n A 1 16 U 16 16 16 U U C . n A 1 17 A 17 17 17 A A C . n A 1 18 C 18 18 18 C C C . n A 1 19 G 19 19 19 G G C . n A 1 20 U 20 20 20 U U C . n A 1 21 U 21 21 21 U U C . n B 1 1 C 1 1 1 C C D . n B 1 2 G 2 2 2 G G D . n B 1 3 U 3 3 3 U U D . n B 1 4 A 4 4 4 A A D . n B 1 5 C 5 5 5 C C D . n B 1 6 G 6 6 6 G G D . n B 1 7 C 7 7 7 C C D . n B 1 8 G 8 8 8 G G D . n B 1 9 U 9 9 9 U U D . n B 1 10 C 10 10 10 C C D . n B 1 11 A 11 11 11 A A D . n B 1 12 C 12 12 12 C C D . n B 1 13 G 13 13 13 G G D . n B 1 14 C 14 14 14 C C D . n B 1 15 G 15 15 15 G G D . n B 1 16 U 16 16 16 U U D . n B 1 17 A 17 17 17 A A D . n B 1 18 C 18 18 18 C C D . n B 1 19 G 19 19 19 G G D . n B 1 20 U 20 20 20 U U D . n B 1 21 U 21 21 21 U U D . n C 2 1 MET 1 1 ? ? ? A . n C 2 2 GLU 2 2 ? ? ? A . n C 2 3 ARG 3 3 ? ? ? A . n C 2 4 ALA 4 4 ? ? ? A . n C 2 5 ILE 5 5 ? ? ? A . n C 2 6 GLN 6 6 ? ? ? A . n C 2 7 GLY 7 7 ? ? ? A . n C 2 8 ASN 8 8 8 ASN ASN A . n C 2 9 ASP 9 9 9 ASP ASP A . n C 2 10 THR 10 10 10 THR THR A . n C 2 11 ARG 11 11 11 ARG ARG A . n C 2 12 GLU 12 12 12 GLU GLU A . n C 2 13 GLN 13 13 13 GLN GLN A . n C 2 14 ALA 14 14 14 ALA ALA A . n C 2 15 ASN 15 15 15 ASN ASN A . n C 2 16 GLY 16 16 16 GLY GLY A . n C 2 17 GLU 17 17 17 GLU GLU A . n C 2 18 ARG 18 18 18 ARG ARG A . n C 2 19 TRP 19 19 19 TRP TRP A . n C 2 20 ASP 20 20 20 ASP ASP A . n C 2 21 GLY 21 21 21 GLY GLY A . n C 2 22 GLY 22 22 22 GLY GLY A . n C 2 23 SER 23 23 23 SER SER A . n C 2 24 GLY 24 24 24 GLY GLY A . n C 2 25 GLY 25 25 25 GLY GLY A . n C 2 26 ILE 26 26 26 ILE ILE A . n C 2 27 THR 27 27 27 THR THR A . n C 2 28 SER 28 28 28 SER SER A . n C 2 29 PRO 29 29 29 PRO PRO A . n C 2 30 PHE 30 30 30 PHE PHE A . n C 2 31 LYS 31 31 31 LYS LYS A . n C 2 32 LEU 32 32 32 LEU LEU A . n C 2 33 PRO 33 33 33 PRO PRO A . n C 2 34 ASP 34 34 34 ASP ASP A . n C 2 35 GLU 35 35 35 GLU GLU A . n C 2 36 SER 36 36 36 SER SER A . n C 2 37 PRO 37 37 37 PRO PRO A . n C 2 38 SER 38 38 38 SER SER A . n C 2 39 TRP 39 39 39 TRP TRP A . n C 2 40 THR 40 40 40 THR THR A . n C 2 41 GLU 41 41 41 GLU GLU A . n C 2 42 TRP 42 42 42 TRP TRP A . n C 2 43 ARG 43 43 43 ARG ARG A . n C 2 44 LEU 44 44 44 LEU LEU A . n C 2 45 TYR 45 45 45 TYR TYR A . n C 2 46 ASN 46 46 46 ASN ASN A . n C 2 47 ASP 47 47 47 ASP ASP A . n C 2 48 GLU 48 48 48 GLU GLU A . n C 2 49 THR 49 49 ? ? ? A . n C 2 50 ASN 50 50 ? ? ? A . n C 2 51 SER 51 51 ? ? ? A . n C 2 52 ASN 52 52 ? ? ? A . n C 2 53 GLN 53 53 ? ? ? A . n C 2 54 ASP 54 54 ? ? ? A . n C 2 55 ASN 55 55 55 ASN ASN A . n C 2 56 PRO 56 56 56 PRO PRO A . n C 2 57 LEU 57 57 57 LEU LEU A . n C 2 58 GLY 58 58 58 GLY GLY A . n C 2 59 PHE 59 59 59 PHE PHE A . n C 2 60 LYS 60 60 60 LYS LYS A . n C 2 61 GLU 61 61 61 GLU GLU A . n C 2 62 SER 62 62 62 SER SER A . n C 2 63 TRP 63 63 63 TRP TRP A . n C 2 64 GLY 64 64 64 GLY GLY A . n C 2 65 PHE 65 65 65 PHE PHE A . n C 2 66 GLY 66 66 66 GLY GLY A . n C 2 67 LYS 67 67 67 LYS LYS A . n C 2 68 VAL 68 68 68 VAL VAL A . n C 2 69 VAL 69 69 69 VAL VAL A . n C 2 70 PHE 70 70 70 PHE PHE A . n C 2 71 LYS 71 71 71 LYS LYS A . n C 2 72 ARG 72 72 72 ARG ARG A . n C 2 73 TYR 73 73 73 TYR TYR A . n C 2 74 LEU 74 74 74 LEU LEU A . n C 2 75 ARG 75 75 75 ARG ARG A . n C 2 76 TYR 76 76 76 TYR TYR A . n C 2 77 ASP 77 77 77 ASP ASP A . n C 2 78 ARG 78 78 78 ARG ARG A . n C 2 79 THR 79 79 79 THR THR A . n C 2 80 GLU 80 80 80 GLU GLU A . n C 2 81 ALA 81 81 81 ALA ALA A . n C 2 82 SER 82 82 82 SER SER A . n C 2 83 LEU 83 83 83 LEU LEU A . n C 2 84 HIS 84 84 84 HIS HIS A . n C 2 85 ARG 85 85 85 ARG ARG A . n C 2 86 VAL 86 86 86 VAL VAL A . n C 2 87 LEU 87 87 87 LEU LEU A . n C 2 88 GLY 88 88 88 GLY GLY A . n C 2 89 SER 89 89 89 SER SER A . n C 2 90 TRP 90 90 90 TRP TRP A . n C 2 91 THR 91 91 91 THR THR A . n C 2 92 GLY 92 92 92 GLY GLY A . n C 2 93 ASP 93 93 93 ASP ASP A . n C 2 94 SER 94 94 94 SER SER A . n C 2 95 VAL 95 95 95 VAL VAL A . n C 2 96 ASN 96 96 96 ASN ASN A . n C 2 97 TYR 97 97 97 TYR TYR A . n C 2 98 ALA 98 98 98 ALA ALA A . n C 2 99 ALA 99 99 99 ALA ALA A . n C 2 100 SER 100 100 100 SER SER A . n C 2 101 ARG 101 101 101 ARG ARG A . n C 2 102 PHE 102 102 102 PHE PHE A . n C 2 103 LEU 103 103 103 LEU LEU A . n C 2 104 GLY 104 104 104 GLY GLY A . n C 2 105 ALA 105 105 105 ALA ALA A . n C 2 106 ASN 106 106 106 ASN ASN A . n C 2 107 GLN 107 107 107 GLN GLN A . n C 2 108 VAL 108 108 108 VAL VAL A . n C 2 109 GLY 109 109 109 GLY GLY A . n C 2 110 CYS 110 110 110 CYS CYS A . n C 2 111 THR 111 111 111 THR THR A . n C 2 112 TYR 112 112 112 TYR TYR A . n C 2 113 SER 113 113 113 SER SER A . n C 2 114 ILE 114 114 114 ILE ILE A . n C 2 115 ARG 115 115 115 ARG ARG A . n C 2 116 PHE 116 116 116 PHE PHE A . n C 2 117 ARG 117 117 117 ARG ARG A . n C 2 118 GLY 118 118 118 GLY GLY A . n C 2 119 VAL 119 119 119 VAL VAL A . n C 2 120 SER 120 120 120 SER SER A . n C 2 121 VAL 121 121 121 VAL VAL A . n C 2 122 THR 122 122 122 THR THR A . n C 2 123 ILE 123 123 123 ILE ILE A . n C 2 124 SER 124 124 124 SER SER A . n C 2 125 GLY 125 125 125 GLY GLY A . n C 2 126 GLY 126 126 126 GLY GLY A . n C 2 127 SER 127 127 127 SER SER A . n C 2 128 ARG 128 128 128 ARG ARG A . n C 2 129 THR 129 129 129 THR THR A . n C 2 130 LEU 130 130 130 LEU LEU A . n C 2 131 GLN 131 131 131 GLN GLN A . n C 2 132 HIS 132 132 132 HIS HIS A . n C 2 133 LEU 133 133 133 LEU LEU A . n C 2 134 CYS 134 134 134 CYS CYS A . n C 2 135 GLU 135 135 135 GLU GLU A . n C 2 136 MET 136 136 136 MET MET A . n C 2 137 ALA 137 137 137 ALA ALA A . n C 2 138 ILE 138 138 138 ILE ILE A . n C 2 139 ARG 139 139 139 ARG ARG A . n C 2 140 SER 140 140 140 SER SER A . n C 2 141 LYS 141 141 141 LYS LYS A . n C 2 142 GLN 142 142 142 GLN GLN A . n C 2 143 GLU 143 143 143 GLU GLU A . n C 2 144 LEU 144 144 144 LEU LEU A . n C 2 145 LEU 145 145 145 LEU LEU A . n C 2 146 GLN 146 146 146 GLN GLN A . n C 2 147 LEU 147 147 147 LEU LEU A . n C 2 148 THR 148 148 148 THR THR A . n C 2 149 PRO 149 149 149 PRO PRO A . n C 2 150 VAL 150 150 150 VAL VAL A . n C 2 151 GLU 151 151 151 GLU GLU A . n C 2 152 VAL 152 152 152 VAL VAL A . n C 2 153 GLU 153 153 ? ? ? A . n C 2 154 SER 154 154 ? ? ? A . n C 2 155 ASN 155 155 ? ? ? A . n C 2 156 VAL 156 156 ? ? ? A . n C 2 157 SER 157 157 ? ? ? A . n C 2 158 ARG 158 158 ? ? ? A . n C 2 159 GLY 159 159 ? ? ? A . n C 2 160 CYS 160 160 ? ? ? A . n C 2 161 PRO 161 161 ? ? ? A . n C 2 162 GLU 162 162 ? ? ? A . n C 2 163 GLY 163 163 ? ? ? A . n C 2 164 ILE 164 164 ? ? ? A . n C 2 165 GLU 165 165 ? ? ? A . n C 2 166 THR 166 166 ? ? ? A . n C 2 167 PHE 167 167 ? ? ? A . n C 2 168 LYS 168 168 ? ? ? A . n C 2 169 LYS 169 169 ? ? ? A . n C 2 170 GLU 170 170 ? ? ? A . n C 2 171 SER 171 171 ? ? ? A . n C 2 172 GLU 172 172 ? ? ? A . n D 2 1 MET 1 1 ? ? ? B . n D 2 2 GLU 2 2 ? ? ? B . n D 2 3 ARG 3 3 ? ? ? B . n D 2 4 ALA 4 4 ? ? ? B . n D 2 5 ILE 5 5 ? ? ? B . n D 2 6 GLN 6 6 ? ? ? B . n D 2 7 GLY 7 7 ? ? ? B . n D 2 8 ASN 8 8 8 ASN ASN B . n D 2 9 ASP 9 9 9 ASP ASP B . n D 2 10 THR 10 10 10 THR THR B . n D 2 11 ARG 11 11 11 ARG ARG B . n D 2 12 GLU 12 12 12 GLU GLU B . n D 2 13 GLN 13 13 13 GLN GLN B . n D 2 14 ALA 14 14 14 ALA ALA B . n D 2 15 ASN 15 15 15 ASN ASN B . n D 2 16 GLY 16 16 16 GLY GLY B . n D 2 17 GLU 17 17 17 GLU GLU B . n D 2 18 ARG 18 18 18 ARG ARG B . n D 2 19 TRP 19 19 19 TRP TRP B . n D 2 20 ASP 20 20 20 ASP ASP B . n D 2 21 GLY 21 21 21 GLY GLY B . n D 2 22 GLY 22 22 22 GLY GLY B . n D 2 23 SER 23 23 23 SER SER B . n D 2 24 GLY 24 24 24 GLY GLY B . n D 2 25 GLY 25 25 25 GLY GLY B . n D 2 26 ILE 26 26 26 ILE ILE B . n D 2 27 THR 27 27 27 THR THR B . n D 2 28 SER 28 28 28 SER SER B . n D 2 29 PRO 29 29 29 PRO PRO B . n D 2 30 PHE 30 30 30 PHE PHE B . n D 2 31 LYS 31 31 31 LYS LYS B . n D 2 32 LEU 32 32 32 LEU LEU B . n D 2 33 PRO 33 33 33 PRO PRO B . n D 2 34 ASP 34 34 34 ASP ASP B . n D 2 35 GLU 35 35 35 GLU GLU B . n D 2 36 SER 36 36 36 SER SER B . n D 2 37 PRO 37 37 37 PRO PRO B . n D 2 38 SER 38 38 38 SER SER B . n D 2 39 TRP 39 39 39 TRP TRP B . n D 2 40 THR 40 40 40 THR THR B . n D 2 41 GLU 41 41 41 GLU GLU B . n D 2 42 TRP 42 42 42 TRP TRP B . n D 2 43 ARG 43 43 43 ARG ARG B . n D 2 44 LEU 44 44 44 LEU LEU B . n D 2 45 TYR 45 45 45 TYR TYR B . n D 2 46 ASN 46 46 46 ASN ASN B . n D 2 47 ASP 47 47 47 ASP ASP B . n D 2 48 GLU 48 48 48 GLU GLU B . n D 2 49 THR 49 49 ? ? ? B . n D 2 50 ASN 50 50 ? ? ? B . n D 2 51 SER 51 51 ? ? ? B . n D 2 52 ASN 52 52 ? ? ? B . n D 2 53 GLN 53 53 ? ? ? B . n D 2 54 ASP 54 54 ? ? ? B . n D 2 55 ASN 55 55 55 ASN ASN B . n D 2 56 PRO 56 56 56 PRO PRO B . n D 2 57 LEU 57 57 57 LEU LEU B . n D 2 58 GLY 58 58 58 GLY GLY B . n D 2 59 PHE 59 59 59 PHE PHE B . n D 2 60 LYS 60 60 60 LYS LYS B . n D 2 61 GLU 61 61 61 GLU GLU B . n D 2 62 SER 62 62 62 SER SER B . n D 2 63 TRP 63 63 63 TRP TRP B . n D 2 64 GLY 64 64 64 GLY GLY B . n D 2 65 PHE 65 65 65 PHE PHE B . n D 2 66 GLY 66 66 66 GLY GLY B . n D 2 67 LYS 67 67 67 LYS LYS B . n D 2 68 VAL 68 68 68 VAL VAL B . n D 2 69 VAL 69 69 69 VAL VAL B . n D 2 70 PHE 70 70 70 PHE PHE B . n D 2 71 LYS 71 71 71 LYS LYS B . n D 2 72 ARG 72 72 72 ARG ARG B . n D 2 73 TYR 73 73 73 TYR TYR B . n D 2 74 LEU 74 74 74 LEU LEU B . n D 2 75 ARG 75 75 75 ARG ARG B . n D 2 76 TYR 76 76 76 TYR TYR B . n D 2 77 ASP 77 77 77 ASP ASP B . n D 2 78 ARG 78 78 78 ARG ARG B . n D 2 79 THR 79 79 79 THR THR B . n D 2 80 GLU 80 80 80 GLU GLU B . n D 2 81 ALA 81 81 81 ALA ALA B . n D 2 82 SER 82 82 82 SER SER B . n D 2 83 LEU 83 83 83 LEU LEU B . n D 2 84 HIS 84 84 84 HIS HIS B . n D 2 85 ARG 85 85 85 ARG ARG B . n D 2 86 VAL 86 86 86 VAL VAL B . n D 2 87 LEU 87 87 87 LEU LEU B . n D 2 88 GLY 88 88 88 GLY GLY B . n D 2 89 SER 89 89 89 SER SER B . n D 2 90 TRP 90 90 90 TRP TRP B . n D 2 91 THR 91 91 91 THR THR B . n D 2 92 GLY 92 92 92 GLY GLY B . n D 2 93 ASP 93 93 93 ASP ASP B . n D 2 94 SER 94 94 94 SER SER B . n D 2 95 VAL 95 95 95 VAL VAL B . n D 2 96 ASN 96 96 96 ASN ASN B . n D 2 97 TYR 97 97 97 TYR TYR B . n D 2 98 ALA 98 98 98 ALA ALA B . n D 2 99 ALA 99 99 99 ALA ALA B . n D 2 100 SER 100 100 100 SER SER B . n D 2 101 ARG 101 101 101 ARG ARG B . n D 2 102 PHE 102 102 102 PHE PHE B . n D 2 103 LEU 103 103 103 LEU LEU B . n D 2 104 GLY 104 104 104 GLY GLY B . n D 2 105 ALA 105 105 105 ALA ALA B . n D 2 106 ASN 106 106 106 ASN ASN B . n D 2 107 GLN 107 107 107 GLN GLN B . n D 2 108 VAL 108 108 108 VAL VAL B . n D 2 109 GLY 109 109 109 GLY GLY B . n D 2 110 CYS 110 110 110 CYS CYS B . n D 2 111 THR 111 111 111 THR THR B . n D 2 112 TYR 112 112 112 TYR TYR B . n D 2 113 SER 113 113 113 SER SER B . n D 2 114 ILE 114 114 114 ILE ILE B . n D 2 115 ARG 115 115 115 ARG ARG B . n D 2 116 PHE 116 116 116 PHE PHE B . n D 2 117 ARG 117 117 117 ARG ARG B . n D 2 118 GLY 118 118 118 GLY GLY B . n D 2 119 VAL 119 119 119 VAL VAL B . n D 2 120 SER 120 120 120 SER SER B . n D 2 121 VAL 121 121 121 VAL VAL B . n D 2 122 THR 122 122 122 THR THR B . n D 2 123 ILE 123 123 123 ILE ILE B . n D 2 124 SER 124 124 124 SER SER B . n D 2 125 GLY 125 125 125 GLY GLY B . n D 2 126 GLY 126 126 126 GLY GLY B . n D 2 127 SER 127 127 127 SER SER B . n D 2 128 ARG 128 128 128 ARG ARG B . n D 2 129 THR 129 129 129 THR THR B . n D 2 130 LEU 130 130 130 LEU LEU B . n D 2 131 GLN 131 131 131 GLN GLN B . n D 2 132 HIS 132 132 132 HIS HIS B . n D 2 133 LEU 133 133 133 LEU LEU B . n D 2 134 CYS 134 134 134 CYS CYS B . n D 2 135 GLU 135 135 135 GLU GLU B . n D 2 136 MET 136 136 136 MET MET B . n D 2 137 ALA 137 137 137 ALA ALA B . n D 2 138 ILE 138 138 138 ILE ILE B . n D 2 139 ARG 139 139 139 ARG ARG B . n D 2 140 SER 140 140 140 SER SER B . n D 2 141 LYS 141 141 141 LYS LYS B . n D 2 142 GLN 142 142 142 GLN GLN B . n D 2 143 GLU 143 143 143 GLU GLU B . n D 2 144 LEU 144 144 144 LEU LEU B . n D 2 145 LEU 145 145 145 LEU LEU B . n D 2 146 GLN 146 146 146 GLN GLN B . n D 2 147 LEU 147 147 147 LEU LEU B . n D 2 148 THR 148 148 148 THR THR B . n D 2 149 PRO 149 149 149 PRO PRO B . n D 2 150 VAL 150 150 ? ? ? B . n D 2 151 GLU 151 151 ? ? ? B . n D 2 152 VAL 152 152 ? ? ? B . n D 2 153 GLU 153 153 ? ? ? B . n D 2 154 SER 154 154 ? ? ? B . n D 2 155 ASN 155 155 ? ? ? B . n D 2 156 VAL 156 156 ? ? ? B . n D 2 157 SER 157 157 ? ? ? B . n D 2 158 ARG 158 158 ? ? ? B . n D 2 159 GLY 159 159 ? ? ? B . n D 2 160 CYS 160 160 ? ? ? B . n D 2 161 PRO 161 161 ? ? ? B . n D 2 162 GLU 162 162 ? ? ? B . n D 2 163 GLY 163 163 ? ? ? B . n D 2 164 ILE 164 164 ? ? ? B . n D 2 165 GLU 165 165 ? ? ? B . n D 2 166 THR 166 166 ? ? ? B . n D 2 167 PHE 167 167 ? ? ? B . n D 2 168 LYS 168 168 ? ? ? B . n D 2 169 LYS 169 169 ? ? ? B . n D 2 170 GLU 170 170 ? ? ? B . n D 2 171 SER 171 171 ? ? ? B . n D 2 172 GLU 172 172 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 22 5 HOH HOH C . E 3 HOH 2 23 9 HOH HOH C . E 3 HOH 3 24 10 HOH HOH C . E 3 HOH 4 25 23 HOH HOH C . E 3 HOH 5 26 31 HOH HOH C . E 3 HOH 6 27 62 HOH HOH C . E 3 HOH 7 28 70 HOH HOH C . E 3 HOH 8 29 77 HOH HOH C . E 3 HOH 9 30 79 HOH HOH C . E 3 HOH 10 31 82 HOH HOH C . E 3 HOH 11 32 87 HOH HOH C . E 3 HOH 12 33 94 HOH HOH C . E 3 HOH 13 34 99 HOH HOH C . E 3 HOH 14 35 102 HOH HOH C . E 3 HOH 15 36 108 HOH HOH C . F 3 HOH 1 22 6 HOH HOH D . F 3 HOH 2 23 11 HOH HOH D . F 3 HOH 3 24 21 HOH HOH D . F 3 HOH 4 25 22 HOH HOH D . F 3 HOH 5 26 60 HOH HOH D . F 3 HOH 6 27 72 HOH HOH D . F 3 HOH 7 28 97 HOH HOH D . F 3 HOH 8 29 104 HOH HOH D . F 3 HOH 9 30 110 HOH HOH D . G 3 HOH 1 173 1 HOH HOH A . G 3 HOH 2 174 2 HOH HOH A . G 3 HOH 3 175 3 HOH HOH A . G 3 HOH 4 176 13 HOH HOH A . G 3 HOH 5 177 15 HOH HOH A . G 3 HOH 6 178 16 HOH HOH A . G 3 HOH 7 179 17 HOH HOH A . G 3 HOH 8 180 18 HOH HOH A . G 3 HOH 9 181 19 HOH HOH A . G 3 HOH 10 182 20 HOH HOH A . G 3 HOH 11 183 25 HOH HOH A . G 3 HOH 12 184 26 HOH HOH A . G 3 HOH 13 185 28 HOH HOH A . G 3 HOH 14 186 30 HOH HOH A . G 3 HOH 15 187 33 HOH HOH A . G 3 HOH 16 188 36 HOH HOH A . G 3 HOH 17 189 39 HOH HOH A . G 3 HOH 18 190 40 HOH HOH A . G 3 HOH 19 191 41 HOH HOH A . G 3 HOH 20 192 44 HOH HOH A . G 3 HOH 21 193 45 HOH HOH A . G 3 HOH 22 194 46 HOH HOH A . G 3 HOH 23 195 48 HOH HOH A . G 3 HOH 24 196 49 HOH HOH A . G 3 HOH 25 197 51 HOH HOH A . G 3 HOH 26 198 53 HOH HOH A . G 3 HOH 27 199 57 HOH HOH A . G 3 HOH 28 200 58 HOH HOH A . G 3 HOH 29 201 59 HOH HOH A . G 3 HOH 30 202 63 HOH HOH A . G 3 HOH 31 203 65 HOH HOH A . G 3 HOH 32 204 75 HOH HOH A . G 3 HOH 33 205 78 HOH HOH A . G 3 HOH 34 206 80 HOH HOH A . G 3 HOH 35 207 81 HOH HOH A . G 3 HOH 36 208 84 HOH HOH A . G 3 HOH 37 209 85 HOH HOH A . G 3 HOH 38 210 88 HOH HOH A . G 3 HOH 39 211 89 HOH HOH A . G 3 HOH 40 212 90 HOH HOH A . G 3 HOH 41 213 93 HOH HOH A . G 3 HOH 42 214 106 HOH HOH A . G 3 HOH 43 215 107 HOH HOH A . G 3 HOH 44 216 111 HOH HOH A . H 3 HOH 1 173 4 HOH HOH B . H 3 HOH 2 174 7 HOH HOH B . H 3 HOH 3 175 8 HOH HOH B . H 3 HOH 4 176 12 HOH HOH B . H 3 HOH 5 177 14 HOH HOH B . H 3 HOH 6 178 24 HOH HOH B . H 3 HOH 7 179 27 HOH HOH B . H 3 HOH 8 180 29 HOH HOH B . H 3 HOH 9 181 32 HOH HOH B . H 3 HOH 10 182 34 HOH HOH B . H 3 HOH 11 183 35 HOH HOH B . H 3 HOH 12 184 37 HOH HOH B . H 3 HOH 13 185 38 HOH HOH B . H 3 HOH 14 186 42 HOH HOH B . H 3 HOH 15 187 43 HOH HOH B . H 3 HOH 16 188 47 HOH HOH B . H 3 HOH 17 189 50 HOH HOH B . H 3 HOH 18 190 52 HOH HOH B . H 3 HOH 19 191 54 HOH HOH B . H 3 HOH 20 192 55 HOH HOH B . H 3 HOH 21 193 56 HOH HOH B . H 3 HOH 22 194 61 HOH HOH B . H 3 HOH 23 195 64 HOH HOH B . H 3 HOH 24 196 66 HOH HOH B . H 3 HOH 25 197 67 HOH HOH B . H 3 HOH 26 198 68 HOH HOH B . H 3 HOH 27 199 69 HOH HOH B . H 3 HOH 28 200 71 HOH HOH B . H 3 HOH 29 201 73 HOH HOH B . H 3 HOH 30 202 74 HOH HOH B . H 3 HOH 31 203 76 HOH HOH B . H 3 HOH 32 204 83 HOH HOH B . H 3 HOH 33 205 86 HOH HOH B . H 3 HOH 34 206 91 HOH HOH B . H 3 HOH 35 207 92 HOH HOH B . H 3 HOH 36 208 95 HOH HOH B . H 3 HOH 37 209 96 HOH HOH B . H 3 HOH 38 210 98 HOH HOH B . H 3 HOH 39 211 100 HOH HOH B . H 3 HOH 40 212 101 HOH HOH B . H 3 HOH 41 213 103 HOH HOH B . H 3 HOH 42 214 105 HOH HOH B . H 3 HOH 43 215 109 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 8 ? N ? C ASN 8 N 2 1 Y 1 A ASN 8 ? CA ? C ASN 8 CA 3 1 Y 1 A ASN 8 ? CB ? C ASN 8 CB 4 1 Y 1 A ASN 8 ? CG ? C ASN 8 CG 5 1 Y 1 A ASN 8 ? OD1 ? C ASN 8 OD1 6 1 Y 1 A ASN 8 ? ND2 ? C ASN 8 ND2 7 1 Y 1 A ARG 128 ? CG ? C ARG 128 CG 8 1 Y 1 A ARG 128 ? CD ? C ARG 128 CD 9 1 Y 1 A ARG 128 ? NE ? C ARG 128 NE 10 1 Y 1 A ARG 128 ? CZ ? C ARG 128 CZ 11 1 Y 1 A ARG 128 ? NH1 ? C ARG 128 NH1 12 1 Y 1 A ARG 128 ? NH2 ? C ARG 128 NH2 13 1 Y 1 B ASN 8 ? N ? D ASN 8 N 14 1 Y 1 B ASN 8 ? CB ? D ASN 8 CB 15 1 Y 1 B ASN 8 ? CG ? D ASN 8 CG 16 1 Y 1 B ASN 8 ? OD1 ? D ASN 8 OD1 17 1 Y 1 B ASN 8 ? ND2 ? D ASN 8 ND2 18 1 Y 1 B ARG 101 ? NE ? D ARG 101 NE 19 1 Y 1 B ARG 101 ? CZ ? D ARG 101 CZ 20 1 Y 1 B ARG 101 ? NH1 ? D ARG 101 NH1 21 1 Y 1 B ARG 101 ? NH2 ? D ARG 101 NH2 22 1 Y 1 B ARG 128 ? CG ? D ARG 128 CG 23 1 Y 1 B ARG 128 ? CD ? D ARG 128 CD 24 1 Y 1 B ARG 128 ? NE ? D ARG 128 NE 25 1 Y 1 B ARG 128 ? CZ ? D ARG 128 CZ 26 1 Y 1 B ARG 128 ? NH1 ? D ARG 128 NH1 27 1 Y 1 B ARG 128 ? NH2 ? D ARG 128 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SHARP phasing . ? 3 CNS refinement 1.1 ? 4 # _cell.entry_id 1RPU _cell.length_a 115.400 _cell.length_b 115.400 _cell.length_c 128.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RPU _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 1RPU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.00 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.37 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details 'PEG MME 2000, ammonium sulfate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG MME 2000' ? ? ? 1 2 1 'ammonium sulfate' ? ? ? 1 3 1 'sodium acetate' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG MME 2000' ? ? ? 1 6 2 'ammonium sulfate' ? ? ? 1 7 2 'sodium acetate' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 93.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-04-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 1RPU _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 50.0 _reflns.number_all 17767 _reflns.number_obs 17767 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.087 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 95.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.381 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RPU _refine.ls_d_res_high 2.5 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 17767 _refine.ls_number_reflns_obs 17767 _refine.ls_number_reflns_R_free 862 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.24 _refine.ls_R_factor_obs 0.24 _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.289 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2164 _refine_hist.pdbx_number_atoms_nucleic_acid 1780 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 4055 _refine_hist.d_res_high 2.5 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.18 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1RPU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1RPU _struct.title 'Crystal Structure of CIRV p19 bound to siRNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RPU _struct_keywords.pdbx_keywords 'RNA Binding Protein/RNA' _struct_keywords.text 'RNAi, PROTEIN-RNA COMPLEX, RNA DOUBLE HELIX, RNA LENGTH RECOGNITION, RNA Binding Protein-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VP19_CIRV Q66104 2 ;MERAIQGNDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTE ASLHRVLGSWTGDSVNYAASRFLGANQVGCTYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTPVEVESNVSRGC PEGIETFKKESE ; 1 ? 2 PDB 1RPU 1RPU 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RPU A 1 ? 172 ? Q66104 1 ? 172 ? 1 172 2 1 1RPU B 1 ? 172 ? Q66104 1 ? 172 ? 1 172 3 2 1RPU C 1 ? 21 ? 1RPU 1 ? 21 ? 1 21 4 2 1RPU D 1 ? 21 ? 1RPU 1 ? 21 ? 1 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP C 9 ? ARG C 18 ? ASP A 9 ARG A 18 1 ? 10 HELX_P HELX_P2 2 SER C 38 ? ASN C 46 ? SER A 38 ASN A 46 1 ? 9 HELX_P HELX_P3 3 THR C 79 ? LEU C 87 ? THR A 79 LEU A 87 1 ? 9 HELX_P HELX_P4 4 GLY C 88 ? TRP C 90 ? GLY A 88 TRP A 90 5 ? 3 HELX_P HELX_P5 5 THR C 91 ? ARG C 101 ? THR A 91 ARG A 101 1 ? 11 HELX_P HELX_P6 6 THR C 129 ? GLN C 146 ? THR A 129 GLN A 146 1 ? 18 HELX_P HELX_P7 7 ASN D 8 ? ARG D 18 ? ASN B 8 ARG B 18 1 ? 11 HELX_P HELX_P8 8 SER D 38 ? ASN D 46 ? SER B 38 ASN B 46 1 ? 9 HELX_P HELX_P9 9 THR D 79 ? LEU D 87 ? THR B 79 LEU B 87 1 ? 9 HELX_P HELX_P10 10 THR D 91 ? ARG D 101 ? THR B 91 ARG B 101 1 ? 11 HELX_P HELX_P11 11 THR D 129 ? LEU D 145 ? THR B 129 LEU B 145 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 N3 A ? ? 1_555 B G 19 N1 A ? C C 1 D G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 A ? ? 1_555 B G 19 O6 A ? C C 1 D G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 A ? ? 1_555 B G 19 N2 A ? C C 1 D G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 A ? ? 1_555 B C 18 N3 A ? C G 2 D C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 A ? ? 1_555 B C 18 O2 A ? C G 2 D C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 A ? ? 1_555 B C 18 N4 A ? C G 2 D C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 A ? ? 1_555 B A 17 N1 A ? C U 3 D A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 A ? ? 1_555 B A 17 N6 A ? C U 3 D A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A A 4 N1 A ? ? 1_555 B U 16 N3 A ? C A 4 D U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N6 A ? ? 1_555 B U 16 O4 A ? C A 4 D U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N3 A ? ? 1_555 B G 15 N1 A ? C C 5 D G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N4 A ? ? 1_555 B G 15 O6 A ? C C 5 D G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 O2 A ? ? 1_555 B G 15 N2 A ? C C 5 D G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 A ? ? 1_555 B C 14 N3 A ? C G 6 D C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 A ? ? 1_555 B C 14 O2 A ? C G 6 D C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 A ? ? 1_555 B C 14 N4 A ? C G 6 D C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 A ? ? 1_555 B G 13 N1 A ? C C 7 D G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 A ? ? 1_555 B G 13 O6 A ? C C 7 D G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 A ? ? 1_555 B G 13 N2 A ? C C 7 D G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 A ? ? 1_555 B C 12 N3 A ? C G 8 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 A ? ? 1_555 B C 12 O2 A ? C G 8 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 A ? ? 1_555 B C 12 N4 A ? C G 8 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 9 N3 A ? ? 1_555 B A 11 N1 A ? C U 9 D A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 9 O4 A ? ? 1_555 B A 11 N6 A ? C U 9 D A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 10 N3 A ? ? 1_555 B C 10 N4 A ? C C 10 D C 10 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog26 hydrog ? ? A A 11 N1 A ? ? 1_555 B U 9 N3 A ? C A 11 D U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 11 N6 A ? ? 1_555 B U 9 O4 A ? C A 11 D U 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 N3 A ? ? 1_555 B G 8 N1 A ? C C 12 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 12 N4 A ? ? 1_555 B G 8 O6 A ? C C 12 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 12 O2 A ? ? 1_555 B G 8 N2 A ? C C 12 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 13 N1 A ? ? 1_555 B C 7 N3 A ? C G 13 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 13 N2 A ? ? 1_555 B C 7 O2 A ? C G 13 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 13 O6 A ? ? 1_555 B C 7 N4 A ? C G 13 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 14 N3 A ? ? 1_555 B G 6 N1 A ? C C 14 D G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 14 N4 A ? ? 1_555 B G 6 O6 A ? C C 14 D G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 14 O2 A ? ? 1_555 B G 6 N2 A ? C C 14 D G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 15 N1 A ? ? 1_555 B C 5 N3 A ? C G 15 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 15 N2 A ? ? 1_555 B C 5 O2 A ? C G 15 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 15 O6 A ? ? 1_555 B C 5 N4 A ? C G 15 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 16 N3 A ? ? 1_555 B A 4 N1 A ? C U 16 D A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 16 O4 A ? ? 1_555 B A 4 N6 A ? C U 16 D A 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A A 17 N1 A ? ? 1_555 B U 3 N3 A ? C A 17 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A A 17 N6 A ? ? 1_555 B U 3 O4 A ? C A 17 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 18 N3 A ? ? 1_555 B G 2 N1 A ? C C 18 D G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 18 N4 A ? ? 1_555 B G 2 O6 A ? C C 18 D G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 18 O2 A ? ? 1_555 B G 2 N2 A ? C C 18 D G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 19 N1 A ? ? 1_555 B C 1 N3 A ? C G 19 D C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 19 N2 A ? ? 1_555 B C 1 O2 A ? C G 19 D C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 19 O6 A ? ? 1_555 B C 1 N4 A ? C G 19 D C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 68 ? ARG C 75 ? VAL A 68 ARG A 75 A 2 GLY C 58 ? PHE C 65 ? GLY A 58 PHE A 65 A 3 GLY C 109 ? PHE C 116 ? GLY A 109 PHE A 116 A 4 VAL C 119 ? GLY C 126 ? VAL A 119 GLY A 126 A 5 VAL D 119 ? GLY D 126 ? VAL B 119 GLY B 126 A 6 GLY D 109 ? PHE D 116 ? GLY B 109 PHE B 116 A 7 GLY D 58 ? PHE D 65 ? GLY B 58 PHE B 65 A 8 VAL D 68 ? ARG D 75 ? VAL B 68 ARG B 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE C 70 ? O PHE A 70 N TRP C 63 ? N TRP A 63 A 2 3 N GLY C 64 ? N GLY A 64 O THR C 111 ? O THR A 111 A 3 4 N TYR C 112 ? N TYR A 112 O ILE C 123 ? O ILE A 123 A 4 5 N SER C 124 ? N SER A 124 O SER D 120 ? O SER B 120 A 5 6 O ILE D 123 ? O ILE B 123 N TYR D 112 ? N TYR B 112 A 6 7 O THR D 111 ? O THR B 111 N GLY D 64 ? N GLY B 64 A 7 8 N TRP D 63 ? N TRP B 63 O PHE D 70 ? O PHE B 70 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P C C 1 ? A OP3 C C 1 ? A 1.518 1.607 -0.089 0.012 N 2 1 P C C 1 ? B OP3 C C 1 ? B 1.521 1.607 -0.086 0.012 N 3 1 P D C 1 ? A OP3 D C 1 ? A 1.519 1.607 -0.088 0.012 N 4 1 P D C 1 ? B OP3 D C 1 ? B 1.522 1.607 -0.085 0.012 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 55 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 56 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 56 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 130.35 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 11.05 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 23 ? ? -57.33 -177.68 2 1 TRP A 42 ? ? -67.71 -73.06 3 1 ASP A 47 ? ? -145.58 -21.27 4 1 THR A 148 ? ? -8.84 117.37 5 1 PRO A 149 ? ? -38.73 142.75 6 1 SER B 23 ? ? 62.02 141.08 7 1 GLU B 35 ? ? -143.92 27.22 8 1 ASN B 46 ? ? -78.09 34.41 9 1 ASP B 47 ? ? -143.35 -13.16 10 1 ARG B 78 ? ? 82.78 36.43 11 1 SER B 89 ? ? -48.52 -19.98 12 1 ARG B 101 ? ? -66.13 8.41 13 1 PHE B 102 ? ? -144.50 -9.60 14 1 LEU B 103 ? ? -26.43 -58.61 15 1 ALA B 105 ? ? 64.15 -16.93 16 1 SER B 127 ? ? -39.08 -35.72 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id U _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 9 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id A _pdbx_validate_planes.rmsd 0.080 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? C MET 1 2 1 Y 1 A GLU 2 ? C GLU 2 3 1 Y 1 A ARG 3 ? C ARG 3 4 1 Y 1 A ALA 4 ? C ALA 4 5 1 Y 1 A ILE 5 ? C ILE 5 6 1 Y 1 A GLN 6 ? C GLN 6 7 1 Y 1 A GLY 7 ? C GLY 7 8 1 Y 1 A THR 49 ? C THR 49 9 1 Y 1 A ASN 50 ? C ASN 50 10 1 Y 1 A SER 51 ? C SER 51 11 1 Y 1 A ASN 52 ? C ASN 52 12 1 Y 1 A GLN 53 ? C GLN 53 13 1 Y 1 A ASP 54 ? C ASP 54 14 1 Y 1 A GLU 153 ? C GLU 153 15 1 Y 1 A SER 154 ? C SER 154 16 1 Y 1 A ASN 155 ? C ASN 155 17 1 Y 1 A VAL 156 ? C VAL 156 18 1 Y 1 A SER 157 ? C SER 157 19 1 Y 1 A ARG 158 ? C ARG 158 20 1 Y 1 A GLY 159 ? C GLY 159 21 1 Y 1 A CYS 160 ? C CYS 160 22 1 Y 1 A PRO 161 ? C PRO 161 23 1 Y 1 A GLU 162 ? C GLU 162 24 1 Y 1 A GLY 163 ? C GLY 163 25 1 Y 1 A ILE 164 ? C ILE 164 26 1 Y 1 A GLU 165 ? C GLU 165 27 1 Y 1 A THR 166 ? C THR 166 28 1 Y 1 A PHE 167 ? C PHE 167 29 1 Y 1 A LYS 168 ? C LYS 168 30 1 Y 1 A LYS 169 ? C LYS 169 31 1 Y 1 A GLU 170 ? C GLU 170 32 1 Y 1 A SER 171 ? C SER 171 33 1 Y 1 A GLU 172 ? C GLU 172 34 1 Y 1 B MET 1 ? D MET 1 35 1 Y 1 B GLU 2 ? D GLU 2 36 1 Y 1 B ARG 3 ? D ARG 3 37 1 Y 1 B ALA 4 ? D ALA 4 38 1 Y 1 B ILE 5 ? D ILE 5 39 1 Y 1 B GLN 6 ? D GLN 6 40 1 Y 1 B GLY 7 ? D GLY 7 41 1 Y 1 B THR 49 ? D THR 49 42 1 Y 1 B ASN 50 ? D ASN 50 43 1 Y 1 B SER 51 ? D SER 51 44 1 Y 1 B ASN 52 ? D ASN 52 45 1 Y 1 B GLN 53 ? D GLN 53 46 1 Y 1 B ASP 54 ? D ASP 54 47 1 Y 1 B VAL 150 ? D VAL 150 48 1 Y 1 B GLU 151 ? D GLU 151 49 1 Y 1 B VAL 152 ? D VAL 152 50 1 Y 1 B GLU 153 ? D GLU 153 51 1 Y 1 B SER 154 ? D SER 154 52 1 Y 1 B ASN 155 ? D ASN 155 53 1 Y 1 B VAL 156 ? D VAL 156 54 1 Y 1 B SER 157 ? D SER 157 55 1 Y 1 B ARG 158 ? D ARG 158 56 1 Y 1 B GLY 159 ? D GLY 159 57 1 Y 1 B CYS 160 ? D CYS 160 58 1 Y 1 B PRO 161 ? D PRO 161 59 1 Y 1 B GLU 162 ? D GLU 162 60 1 Y 1 B GLY 163 ? D GLY 163 61 1 Y 1 B ILE 164 ? D ILE 164 62 1 Y 1 B GLU 165 ? D GLU 165 63 1 Y 1 B THR 166 ? D THR 166 64 1 Y 1 B PHE 167 ? D PHE 167 65 1 Y 1 B LYS 168 ? D LYS 168 66 1 Y 1 B LYS 169 ? D LYS 169 67 1 Y 1 B GLU 170 ? D GLU 170 68 1 Y 1 B SER 171 ? D SER 171 69 1 Y 1 B GLU 172 ? D GLU 172 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 PHE N N N N 360 PHE CA C N S 361 PHE C C N N 362 PHE O O N N 363 PHE CB C N N 364 PHE CG C Y N 365 PHE CD1 C Y N 366 PHE CD2 C Y N 367 PHE CE1 C Y N 368 PHE CE2 C Y N 369 PHE CZ C Y N 370 PHE OXT O N N 371 PHE H H N N 372 PHE H2 H N N 373 PHE HA H N N 374 PHE HB2 H N N 375 PHE HB3 H N N 376 PHE HD1 H N N 377 PHE HD2 H N N 378 PHE HE1 H N N 379 PHE HE2 H N N 380 PHE HZ H N N 381 PHE HXT H N N 382 PRO N N N N 383 PRO CA C N S 384 PRO C C N N 385 PRO O O N N 386 PRO CB C N N 387 PRO CG C N N 388 PRO CD C N N 389 PRO OXT O N N 390 PRO H H N N 391 PRO HA H N N 392 PRO HB2 H N N 393 PRO HB3 H N N 394 PRO HG2 H N N 395 PRO HG3 H N N 396 PRO HD2 H N N 397 PRO HD3 H N N 398 PRO HXT H N N 399 SER N N N N 400 SER CA C N S 401 SER C C N N 402 SER O O N N 403 SER CB C N N 404 SER OG O N N 405 SER OXT O N N 406 SER H H N N 407 SER H2 H N N 408 SER HA H N N 409 SER HB2 H N N 410 SER HB3 H N N 411 SER HG H N N 412 SER HXT H N N 413 THR N N N N 414 THR CA C N S 415 THR C C N N 416 THR O O N N 417 THR CB C N R 418 THR OG1 O N N 419 THR CG2 C N N 420 THR OXT O N N 421 THR H H N N 422 THR H2 H N N 423 THR HA H N N 424 THR HB H N N 425 THR HG1 H N N 426 THR HG21 H N N 427 THR HG22 H N N 428 THR HG23 H N N 429 THR HXT H N N 430 TRP N N N N 431 TRP CA C N S 432 TRP C C N N 433 TRP O O N N 434 TRP CB C N N 435 TRP CG C Y N 436 TRP CD1 C Y N 437 TRP CD2 C Y N 438 TRP NE1 N Y N 439 TRP CE2 C Y N 440 TRP CE3 C Y N 441 TRP CZ2 C Y N 442 TRP CZ3 C Y N 443 TRP CH2 C Y N 444 TRP OXT O N N 445 TRP H H N N 446 TRP H2 H N N 447 TRP HA H N N 448 TRP HB2 H N N 449 TRP HB3 H N N 450 TRP HD1 H N N 451 TRP HE1 H N N 452 TRP HE3 H N N 453 TRP HZ2 H N N 454 TRP HZ3 H N N 455 TRP HH2 H N N 456 TRP HXT H N N 457 TYR N N N N 458 TYR CA C N S 459 TYR C C N N 460 TYR O O N N 461 TYR CB C N N 462 TYR CG C Y N 463 TYR CD1 C Y N 464 TYR CD2 C Y N 465 TYR CE1 C Y N 466 TYR CE2 C Y N 467 TYR CZ C Y N 468 TYR OH O N N 469 TYR OXT O N N 470 TYR H H N N 471 TYR H2 H N N 472 TYR HA H N N 473 TYR HB2 H N N 474 TYR HB3 H N N 475 TYR HD1 H N N 476 TYR HD2 H N N 477 TYR HE1 H N N 478 TYR HE2 H N N 479 TYR HH H N N 480 TYR HXT H N N 481 U OP3 O N N 482 U P P N N 483 U OP1 O N N 484 U OP2 O N N 485 U "O5'" O N N 486 U "C5'" C N N 487 U "C4'" C N R 488 U "O4'" O N N 489 U "C3'" C N S 490 U "O3'" O N N 491 U "C2'" C N R 492 U "O2'" O N N 493 U "C1'" C N R 494 U N1 N N N 495 U C2 C N N 496 U O2 O N N 497 U N3 N N N 498 U C4 C N N 499 U O4 O N N 500 U C5 C N N 501 U C6 C N N 502 U HOP3 H N N 503 U HOP2 H N N 504 U "H5'" H N N 505 U "H5''" H N N 506 U "H4'" H N N 507 U "H3'" H N N 508 U "HO3'" H N N 509 U "H2'" H N N 510 U "HO2'" H N N 511 U "H1'" H N N 512 U H3 H N N 513 U H5 H N N 514 U H6 H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 U OP3 P sing N N 473 U OP3 HOP3 sing N N 474 U P OP1 doub N N 475 U P OP2 sing N N 476 U P "O5'" sing N N 477 U OP2 HOP2 sing N N 478 U "O5'" "C5'" sing N N 479 U "C5'" "C4'" sing N N 480 U "C5'" "H5'" sing N N 481 U "C5'" "H5''" sing N N 482 U "C4'" "O4'" sing N N 483 U "C4'" "C3'" sing N N 484 U "C4'" "H4'" sing N N 485 U "O4'" "C1'" sing N N 486 U "C3'" "O3'" sing N N 487 U "C3'" "C2'" sing N N 488 U "C3'" "H3'" sing N N 489 U "O3'" "HO3'" sing N N 490 U "C2'" "O2'" sing N N 491 U "C2'" "C1'" sing N N 492 U "C2'" "H2'" sing N N 493 U "O2'" "HO2'" sing N N 494 U "C1'" N1 sing N N 495 U "C1'" "H1'" sing N N 496 U N1 C2 sing N N 497 U N1 C6 sing N N 498 U C2 O2 doub N N 499 U C2 N3 sing N N 500 U N3 C4 sing N N 501 U N3 H3 sing N N 502 U C4 O4 doub N N 503 U C4 C5 sing N N 504 U C5 C6 doub N N 505 U C5 H5 sing N N 506 U C6 H6 sing N N 507 VAL N CA sing N N 508 VAL N H sing N N 509 VAL N H2 sing N N 510 VAL CA C sing N N 511 VAL CA CB sing N N 512 VAL CA HA sing N N 513 VAL C O doub N N 514 VAL C OXT sing N N 515 VAL CB CG1 sing N N 516 VAL CB CG2 sing N N 517 VAL CB HB sing N N 518 VAL CG1 HG11 sing N N 519 VAL CG1 HG12 sing N N 520 VAL CG1 HG13 sing N N 521 VAL CG2 HG21 sing N N 522 VAL CG2 HG22 sing N N 523 VAL CG2 HG23 sing N N 524 VAL OXT HXT sing N N 525 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1RPU 'a-form double helix' 1RPU 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 B G 19 1_555 0.142 -0.024 -0.537 9.053 -5.665 -0.156 1 C_C1:G19_D C 1 ? D 19 ? 19 1 1 A G 2 1_555 B C 18 1_555 -0.209 -0.059 -0.387 -8.524 -18.492 4.751 2 C_G2:C18_D C 2 ? D 18 ? 19 1 1 A U 3 1_555 B A 17 1_555 -0.033 -0.071 -0.600 1.806 -22.604 4.317 3 C_U3:A17_D C 3 ? D 17 ? 20 1 1 A A 4 1_555 B U 16 1_555 0.157 -0.011 -0.279 -7.447 -14.505 1.732 4 C_A4:U16_D C 4 ? D 16 ? 20 1 1 A C 5 1_555 B G 15 1_555 0.064 -0.061 -0.237 8.326 -11.120 1.497 5 C_C5:G15_D C 5 ? D 15 ? 19 1 1 A G 6 1_555 B C 14 1_555 -0.191 -0.200 0.250 4.922 -8.619 -0.084 6 C_G6:C14_D C 6 ? D 14 ? 19 1 1 A C 7 1_555 B G 13 1_555 0.120 -0.082 -0.026 -2.029 -6.325 -2.127 7 C_C7:G13_D C 7 ? D 13 ? 19 1 1 A G 8 1_555 B C 12 1_555 -0.064 -0.016 -0.146 -9.244 -10.607 -0.112 8 C_G8:C12_D C 8 ? D 12 ? 19 1 1 A U 9 1_555 B A 11 1_555 -0.053 -0.059 -0.064 -4.712 -7.037 0.027 9 C_U9:A11_D C 9 ? D 11 ? 20 1 1 A C 10 1_555 B C 10 1_555 3.160 -1.181 0.303 -0.573 -5.768 -10.924 10 C_C10:C10_D C 10 ? D 10 ? ? ? 1 A A 11 1_555 B U 9 1_555 0.007 -0.111 -0.319 -5.288 -11.698 6.337 11 C_A11:U9_D C 11 ? D 9 ? 20 1 1 A C 12 1_555 B G 8 1_555 0.131 -0.026 -0.697 19.507 -21.594 0.911 12 C_C12:G8_D C 12 ? D 8 ? 19 1 1 A G 13 1_555 B C 7 1_555 -0.259 -0.126 0.108 4.841 -12.991 0.221 13 C_G13:C7_D C 13 ? D 7 ? 19 1 1 A C 14 1_555 B G 6 1_555 0.058 -0.033 0.133 3.174 -16.707 -0.055 14 C_C14:G6_D C 14 ? D 6 ? 19 1 1 A G 15 1_555 B C 5 1_555 0.082 -0.004 -0.185 -7.267 -11.068 -2.691 15 C_G15:C5_D C 15 ? D 5 ? 19 1 1 A U 16 1_555 B A 4 1_555 -0.028 0.002 0.360 -0.028 -16.574 -1.765 16 C_U16:A4_D C 16 ? D 4 ? 20 1 1 A A 17 1_555 B U 3 1_555 -0.083 -0.046 0.108 3.027 -6.905 2.099 17 C_A17:U3_D C 17 ? D 3 ? 20 1 1 A C 18 1_555 B G 2 1_555 0.059 -0.129 -0.230 1.915 -20.939 2.483 18 C_C18:G2_D C 18 ? D 2 ? 19 1 1 A G 19 1_555 B C 1 1_555 -0.096 -0.083 -0.512 -9.977 -0.822 1.956 19 C_G19:C1_D C 19 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 B G 19 1_555 A G 2 1_555 B C 18 1_555 -0.072 -2.100 3.855 -3.844 13.571 29.533 -6.200 -0.570 2.650 24.910 7.056 32.661 1 CC_C1G2:C18G19_DD C 1 ? D 19 ? C 2 ? D 18 ? 1 A G 2 1_555 B C 18 1_555 A U 3 1_555 B A 17 1_555 -0.297 -1.537 2.914 2.245 2.964 32.101 -3.217 0.878 2.739 5.338 -4.042 32.310 2 CC_G2U3:A17C18_DD C 2 ? D 18 ? C 3 ? D 17 ? 1 A U 3 1_555 B A 17 1_555 A A 4 1_555 B U 16 1_555 0.210 -1.485 3.604 0.039 14.933 32.098 -4.676 -0.341 2.673 25.363 -0.067 35.319 3 CC_U3A4:U16A17_DD C 3 ? D 17 ? C 4 ? D 16 ? 1 A A 4 1_555 B U 16 1_555 A C 5 1_555 B G 15 1_555 0.256 -1.789 2.866 0.600 1.325 26.811 -4.147 -0.418 2.781 2.855 -1.293 26.850 4 CC_A4C5:G15U16_DD C 4 ? D 16 ? C 5 ? D 15 ? 1 A C 5 1_555 B G 15 1_555 A G 6 1_555 B C 14 1_555 -0.475 -2.134 3.367 -6.438 7.006 25.167 -6.325 -0.572 2.721 15.393 14.146 26.879 5 CC_C5G6:C14G15_DD C 5 ? D 15 ? C 6 ? D 14 ? 1 A G 6 1_555 B C 14 1_555 A C 7 1_555 B G 13 1_555 -0.199 -1.904 3.352 1.866 11.637 36.392 -4.287 0.525 2.629 18.059 -2.896 38.192 6 CC_G6C7:G13C14_DD C 6 ? D 14 ? C 7 ? D 13 ? 1 A C 7 1_555 B G 13 1_555 A G 8 1_555 B C 12 1_555 0.898 -1.892 3.370 7.687 7.780 29.980 -4.856 -0.242 2.935 14.449 -14.275 31.869 7 CC_C7G8:C12G13_DD C 7 ? D 13 ? C 8 ? D 12 ? 1 A G 8 1_555 B C 12 1_555 A U 9 1_555 B A 11 1_555 1.226 -1.893 3.135 3.681 3.340 28.181 -4.550 -1.690 3.027 6.792 -7.486 28.607 8 CC_G8U9:A11C12_DD C 8 ? D 12 ? C 9 ? D 11 ? 1 A U 9 1_555 B A 11 1_555 A C 10 1_555 B C 10 1_555 -1.179 -1.713 3.174 -3.189 5.939 39.416 -3.153 1.378 2.978 8.727 4.687 39.966 9 CC_U9C10:C10A11_DD C 9 ? D 11 ? C 10 ? D 10 ? 1 A C 10 1_555 B C 10 1_555 A A 11 1_555 B U 9 1_555 1.157 -2.307 3.359 9.229 7.749 23.335 -7.150 -0.091 2.724 17.724 -21.108 26.225 10 CC_C10A11:U9C10_DD C 10 ? D 10 ? C 11 ? D 9 ? 1 A A 11 1_555 B U 9 1_555 A C 12 1_555 B G 8 1_555 -1.171 -1.521 2.748 0.563 -2.108 26.832 -2.805 2.638 2.832 -4.532 -1.211 26.919 11 CC_A11C12:G8U9_DD C 11 ? D 9 ? C 12 ? D 8 ? 1 A C 12 1_555 B G 8 1_555 A G 13 1_555 B C 7 1_555 -0.449 -1.892 3.622 -7.379 16.931 29.675 -5.689 -0.353 2.292 29.712 12.949 34.843 12 CC_C12G13:C7G8_DD C 12 ? D 8 ? C 13 ? D 7 ? 1 A G 13 1_555 B C 7 1_555 A C 14 1_555 B G 6 1_555 0.023 -1.711 3.219 -1.353 7.077 35.314 -3.706 -0.217 2.832 11.518 2.203 36.019 13 CC_G13C14:G6C7_DD C 13 ? D 7 ? C 14 ? D 6 ? 1 A C 14 1_555 B G 6 1_555 A G 15 1_555 B C 5 1_555 -0.269 -2.143 3.455 1.659 11.277 31.398 -5.506 0.730 2.538 20.029 -2.947 33.354 14 CC_C14G15:C5G6_DD C 14 ? D 6 ? C 15 ? D 5 ? 1 A G 15 1_555 B C 5 1_555 A U 16 1_555 B A 4 1_555 0.799 -1.765 3.028 -2.450 7.106 27.536 -4.958 -2.097 2.426 14.588 5.030 28.525 15 CC_G15U16:A4C5_DD C 15 ? D 5 ? C 16 ? D 4 ? 1 A U 16 1_555 B A 4 1_555 A A 17 1_555 B U 3 1_555 -0.550 -1.946 3.076 -0.128 2.480 26.223 -4.877 1.176 2.885 5.451 0.282 26.338 16 CC_U16A17:U3A4_DD C 16 ? D 4 ? C 17 ? D 3 ? 1 A A 17 1_555 B U 3 1_555 A C 18 1_555 B G 2 1_555 -0.015 -1.570 3.218 2.677 8.126 31.530 -4.098 0.456 2.729 14.620 -4.817 32.641 17 CC_A17C18:G2U3_DD C 17 ? D 3 ? C 18 ? D 2 ? 1 A C 18 1_555 B G 2 1_555 A G 19 1_555 B C 1 1_555 -0.090 -1.983 3.608 1.040 13.907 29.560 -5.886 0.337 2.448 25.544 -1.910 32.618 18 CC_C18G19:C1G2_DD C 18 ? D 2 ? C 19 ? D 1 ? # _atom_sites.entry_id 1RPU _atom_sites.fract_transf_matrix[1][1] 0.008666 _atom_sites.fract_transf_matrix[1][2] 0.005003 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010006 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007800 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_