HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04-DEC-03 1RQ8 TITLE SOLUTION STRUCTURE OF THE HYPOTHETICAL PROTEIN SAV1595 FROM TITLE 2 STAPHYLOCOCCUS AUREUS, A PUTATIVE RNA BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: HOMOLOGOUS TO YHBY OF E.COLI. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS STRUCTURAL GENOMICS, SAV1595, YHBY, UPF0044, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR D.LIU,D.F.WYSS REVDAT 3 02-MAR-22 1RQ8 1 REMARK SEQADV REVDAT 2 24-FEB-09 1RQ8 1 VERSN REVDAT 1 06-JUL-04 1RQ8 0 JRNL AUTH D.LIU,D.F.WYSS JRNL TITL SOLUTION STRUCTURE OF THE HYPOTHETICAL PROTEIN SAV1595 FROM JRNL TITL 2 STAPHYLOCOCCUS AUREUS, A PUTATIVE RNA BINDING PROTEIN. JRNL REF J.BIOMOL.NMR V. 29 391 2004 JRNL REFN ISSN 0925-2738 JRNL PMID 15213438 JRNL DOI 10.1023/B:JNMR.0000032524.62229.93 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 98, X-PLOR 98 REMARK 3 AUTHORS : ACCELRYS (X-PLOR), ACCELRYS (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RQ8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000020946. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0.45 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM SAV1595, U-15N,13C; 75 MM REMARK 210 PHOSPHATE BUFFER, 8%D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 10 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 LEU A 97 REMARK 465 GLU A 98 REMARK 465 HIS A 99 REMARK 465 HIS A 100 REMARK 465 HIS A 101 REMARK 465 HIS A 102 REMARK 465 HIS A 103 REMARK 465 HIS A 104 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 33 H ASP A 37 1.53 REMARK 500 O LEU A 61 H LEU A 65 1.53 REMARK 500 O VAL A 48 H ILE A 81 1.54 REMARK 500 O GLN A 75 H VAL A 82 1.55 REMARK 500 O LEU A 40 HE ARG A 85 1.56 REMARK 500 O GLU A 30 H LYS A 34 1.58 REMARK 500 O LYS A 7 H ARG A 11 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 53 -60.50 66.38 REMARK 500 1 GLN A 75 168.16 175.96 REMARK 500 1 GLU A 86 169.42 -37.23 REMARK 500 1 LYS A 88 -48.03 -146.73 REMARK 500 1 ASN A 90 81.28 -57.25 REMARK 500 1 GLU A 92 75.72 -64.69 REMARK 500 1 LEU A 95 65.52 -173.06 REMARK 500 2 LEU A 51 34.42 -86.46 REMARK 500 2 SER A 71 -167.37 -117.37 REMARK 500 2 GLN A 75 179.03 171.73 REMARK 500 2 GLU A 86 -149.05 30.97 REMARK 500 2 LYS A 88 -58.80 -141.74 REMARK 500 2 ASN A 90 81.66 -57.45 REMARK 500 2 LYS A 91 -166.92 -100.01 REMARK 500 3 LEU A 51 40.03 -86.24 REMARK 500 3 GLN A 75 -177.64 176.76 REMARK 500 3 GLU A 86 174.22 -41.29 REMARK 500 3 LYS A 88 -48.22 -148.15 REMARK 500 3 ASN A 90 83.81 -54.17 REMARK 500 3 GLU A 92 74.00 -64.54 REMARK 500 3 LEU A 95 69.55 -175.83 REMARK 500 4 ARG A 43 -158.82 -106.35 REMARK 500 4 GLU A 44 -57.21 -121.82 REMARK 500 4 ASN A 53 14.22 59.80 REMARK 500 4 PHE A 55 -70.71 -82.35 REMARK 500 4 GLU A 86 -144.93 24.01 REMARK 500 4 LYS A 88 -62.27 -152.59 REMARK 500 4 ASN A 90 78.03 -62.09 REMARK 500 4 GLU A 92 74.23 -65.15 REMARK 500 4 LEU A 95 65.05 -168.90 REMARK 500 5 ARG A 43 -153.39 79.68 REMARK 500 5 GLU A 44 -146.60 73.75 REMARK 500 5 PHE A 55 -84.99 -77.44 REMARK 500 5 GLN A 75 -174.06 178.30 REMARK 500 5 GLU A 86 -145.14 18.65 REMARK 500 5 LYS A 88 -63.96 -156.28 REMARK 500 5 ASN A 90 77.37 -60.39 REMARK 500 5 GLU A 92 71.89 -65.26 REMARK 500 5 LEU A 95 65.93 -176.14 REMARK 500 6 LEU A 51 44.15 -88.74 REMARK 500 6 ASN A 53 -73.76 63.95 REMARK 500 6 SER A 71 -167.29 -121.43 REMARK 500 6 GLN A 75 170.33 179.14 REMARK 500 6 SER A 79 -1.13 71.86 REMARK 500 6 GLU A 86 -146.10 27.28 REMARK 500 6 LYS A 88 -62.20 -150.82 REMARK 500 6 ASN A 90 80.45 -60.05 REMARK 500 6 GLU A 92 73.53 -64.77 REMARK 500 6 LEU A 95 62.64 -164.75 REMARK 500 7 ASN A 53 -59.16 65.83 REMARK 500 REMARK 500 THIS ENTRY HAS 83 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 8 0.19 SIDE CHAIN REMARK 500 1 ARG A 11 0.20 SIDE CHAIN REMARK 500 1 ARG A 43 0.28 SIDE CHAIN REMARK 500 1 ARG A 70 0.32 SIDE CHAIN REMARK 500 1 ARG A 85 0.31 SIDE CHAIN REMARK 500 2 ARG A 8 0.32 SIDE CHAIN REMARK 500 2 ARG A 11 0.22 SIDE CHAIN REMARK 500 2 ARG A 43 0.24 SIDE CHAIN REMARK 500 2 ARG A 70 0.16 SIDE CHAIN REMARK 500 2 ARG A 85 0.21 SIDE CHAIN REMARK 500 3 ARG A 8 0.20 SIDE CHAIN REMARK 500 3 ARG A 11 0.30 SIDE CHAIN REMARK 500 3 ARG A 43 0.30 SIDE CHAIN REMARK 500 3 ARG A 70 0.23 SIDE CHAIN REMARK 500 3 ARG A 85 0.30 SIDE CHAIN REMARK 500 4 ARG A 8 0.23 SIDE CHAIN REMARK 500 4 ARG A 11 0.31 SIDE CHAIN REMARK 500 4 ARG A 43 0.28 SIDE CHAIN REMARK 500 4 ARG A 70 0.31 SIDE CHAIN REMARK 500 4 ARG A 85 0.25 SIDE CHAIN REMARK 500 5 ARG A 8 0.18 SIDE CHAIN REMARK 500 5 ARG A 11 0.25 SIDE CHAIN REMARK 500 5 ARG A 43 0.32 SIDE CHAIN REMARK 500 5 ARG A 70 0.24 SIDE CHAIN REMARK 500 5 ARG A 85 0.32 SIDE CHAIN REMARK 500 6 ARG A 8 0.27 SIDE CHAIN REMARK 500 6 ARG A 11 0.27 SIDE CHAIN REMARK 500 6 ARG A 43 0.30 SIDE CHAIN REMARK 500 6 ARG A 70 0.25 SIDE CHAIN REMARK 500 6 ARG A 85 0.19 SIDE CHAIN REMARK 500 7 ARG A 8 0.27 SIDE CHAIN REMARK 500 7 ARG A 11 0.30 SIDE CHAIN REMARK 500 7 ARG A 43 0.31 SIDE CHAIN REMARK 500 7 ARG A 70 0.32 SIDE CHAIN REMARK 500 7 ARG A 85 0.21 SIDE CHAIN REMARK 500 8 ARG A 8 0.28 SIDE CHAIN REMARK 500 8 ARG A 11 0.26 SIDE CHAIN REMARK 500 8 ARG A 43 0.27 SIDE CHAIN REMARK 500 8 ARG A 70 0.21 SIDE CHAIN REMARK 500 8 ARG A 85 0.15 SIDE CHAIN REMARK 500 9 ARG A 8 0.25 SIDE CHAIN REMARK 500 9 ARG A 11 0.32 SIDE CHAIN REMARK 500 9 ARG A 43 0.29 SIDE CHAIN REMARK 500 9 ARG A 70 0.20 SIDE CHAIN REMARK 500 9 ARG A 85 0.20 SIDE CHAIN REMARK 500 10 ARG A 8 0.29 SIDE CHAIN REMARK 500 10 ARG A 11 0.29 SIDE CHAIN REMARK 500 10 ARG A 43 0.15 SIDE CHAIN REMARK 500 10 ARG A 70 0.22 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1RQ8 A 1 96 UNP Q99TQ4 Q99TQ4_STAAM 1 96 SEQADV 1RQ8 LEU A 97 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 GLU A 98 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 HIS A 99 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 HIS A 100 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 HIS A 101 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 HIS A 102 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 HIS A 103 UNP Q99TQ4 EXPRESSION TAG SEQADV 1RQ8 HIS A 104 UNP Q99TQ4 EXPRESSION TAG SEQRES 1 A 104 MET LEU THR GLY LYS GLN LYS ARG TYR LEU ARG SER LEU SEQRES 2 A 104 ALA HIS ASN ILE ASP PRO ILE PHE GLN ILE GLY LYS GLY SEQRES 3 A 104 GLY ILE ASN GLU ASN MET ILE LYS GLN ILE ASP ASP THR SEQRES 4 A 104 LEU GLU ASN ARG GLU LEU ILE LYS VAL HIS VAL LEU GLN SEQRES 5 A 104 ASN ASN PHE ASP ASP LYS LYS GLU LEU ALA GLU THR LEU SEQRES 6 A 104 SER GLU ALA THR ARG SER GLU LEU VAL GLN VAL ILE GLY SEQRES 7 A 104 SER MET ILE VAL ILE TYR ARG GLU SER LYS GLU ASN LYS SEQRES 8 A 104 GLU ILE GLU LEU PRO LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 THR A 3 ALA A 14 1 12 HELIX 2 2 ASN A 29 ARG A 43 1 15 HELIX 3 3 ASN A 54 ARG A 70 1 17 SHEET 1 A 4 GLN A 22 ILE A 23 0 SHEET 2 A 4 LEU A 45 VAL A 50 1 O HIS A 49 N ILE A 23 SHEET 3 A 4 MET A 80 ARG A 85 -1 O ILE A 81 N VAL A 48 SHEET 4 A 4 SER A 71 ILE A 77 -1 N GLN A 75 O VAL A 82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1