HEADER TRANSFERASE 10-DEC-03 1RTR TITLE CRYSTAL STRUCTURE OF S. AUREUS FARNESYL PYROPHOSPHATE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GERANYLTRANSTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FARNESYL PYROPHOSPHATE SYNTHASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.J.HOSFIELD,Y.ZHANG,D.R.DOUGAN,A.BROOUN,L.W.TARI,R.V.SWANSON,J.FINN REVDAT 4 14-FEB-24 1RTR 1 SEQADV REVDAT 3 24-FEB-09 1RTR 1 VERSN REVDAT 2 06-APR-04 1RTR 1 JRNL REVDAT 1 02-MAR-04 1RTR 0 JRNL AUTH D.J.HOSFIELD,Y.ZHANG,D.R.DOUGAN,A.BROOUN,L.W.TARI, JRNL AUTH 2 R.V.SWANSON,J.FINN JRNL TITL STRUCTURAL BASIS FOR BISPHOSPHONATE-MEDIATED INHIBITION OF JRNL TITL 2 ISOPRENOID BIOSYNTHESIS JRNL REF J.MOL.BIOL. V. 279 8526 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 14672944 JRNL DOI 10.1074/JBC.C300511200 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.19 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 34204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3779 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2413 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 278 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4297 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 161 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : -0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.301 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.249 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.400 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4358 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5886 ; 1.211 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 544 ; 4.811 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 696 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3178 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2189 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 152 ; 0.127 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.208 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.228 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2714 ; 0.570 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4367 ; 1.116 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1644 ; 1.587 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1519 ; 2.801 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RTR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000021028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-02 REMARK 200 TEMPERATURE (KELVIN) : 97 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38076 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 0.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, PHOSPHATE, PH 5, NANOLITER REMARK 280 SITTING DROP VAPOUR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.39467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 108.78933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 81.59200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 135.98667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.19733 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.39467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 108.78933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 135.98667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 81.59200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.19733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 230 REMARK 465 GLY A 231 REMARK 465 LYS A 232 REMARK 465 LYS A 233 REMARK 465 VAL A 234 REMARK 465 GLY A 235 REMARK 465 SER A 236 REMARK 465 ASP A 237 REMARK 465 LEU A 238 REMARK 465 GLU A 239 REMARK 465 ASN A 240 REMARK 465 ASN A 241 REMARK 465 LYS A 242 REMARK 465 ASP A 292 REMARK 465 HIS A 293 REMARK 465 LYS A 294 REMARK 465 GLY A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 HIS A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 MET B 1 REMARK 465 TYR B 224 REMARK 465 GLY B 225 REMARK 465 ASP B 226 REMARK 465 GLU B 227 REMARK 465 ALA B 228 REMARK 465 LYS B 229 REMARK 465 LEU B 230 REMARK 465 GLY B 231 REMARK 465 LYS B 232 REMARK 465 LYS B 233 REMARK 465 VAL B 234 REMARK 465 GLY B 235 REMARK 465 SER B 236 REMARK 465 ASP B 237 REMARK 465 LEU B 238 REMARK 465 GLU B 239 REMARK 465 ASN B 240 REMARK 465 ASN B 241 REMARK 465 LYS B 242 REMARK 465 ASP B 292 REMARK 465 HIS B 293 REMARK 465 LYS B 294 REMARK 465 GLY B 295 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 465 HIS B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 689 O HOH B 706 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 50 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 ASP A 91 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 126 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 157 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 219 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 286 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP B 83 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 91 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 113 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 126 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 222 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 40 -36.32 -38.56 REMARK 500 MET A 87 -118.62 -122.06 REMARK 500 ASN A 89 62.45 64.61 REMARK 500 MET B 87 -113.87 -114.32 REMARK 500 ARG B 94 53.74 32.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RQI RELATED DB: PDB REMARK 900 RELATED ID: 1RQJ RELATED DB: PDB DBREF 1RTR A 1 293 UNP Q8NWD6 Q8NWD6_STAAW 1 293 DBREF 1RTR B 1 293 UNP Q8NWD6 Q8NWD6_STAAW 1 293 SEQADV 1RTR THR A 198 UNP Q8NWD6 ALA 198 CONFLICT SEQADV 1RTR LYS A 294 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR GLY A 295 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS A 296 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS A 297 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS A 298 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS A 299 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS A 300 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS A 301 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR THR B 198 UNP Q8NWD6 ALA 198 CONFLICT SEQADV 1RTR LYS B 294 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR GLY B 295 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS B 296 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS B 297 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS B 298 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS B 299 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS B 300 UNP Q8NWD6 EXPRESSION TAG SEQADV 1RTR HIS B 301 UNP Q8NWD6 EXPRESSION TAG SEQRES 1 A 301 MET THR ASN LEU PRO MET ASN LYS LEU ILE ASP GLU VAL SEQRES 2 A 301 ASN ASN GLU LEU SER VAL ALA ILE ASN LYS SER VAL MET SEQRES 3 A 301 ASP THR GLN LEU GLU GLU SER MET LEU TYR SER LEU ASN SEQRES 4 A 301 ALA GLY GLY LYS ARG ILE ARG PRO VAL LEU LEU LEU LEU SEQRES 5 A 301 THR LEU ASP SER LEU ASN THR GLU TYR GLU LEU GLY MET SEQRES 6 A 301 LYS SER ALA ILE ALA LEU GLU MET ILE HIS THR TYR SER SEQRES 7 A 301 LEU ILE HIS ASP ASP LEU PRO ALA MET ASP ASN ASP ASP SEQRES 8 A 301 TYR ARG ARG GLY LYS LEU THR ASN HIS LYS VAL TYR GLY SEQRES 9 A 301 GLU TRP THR ALA ILE LEU ALA GLY ASP ALA LEU LEU THR SEQRES 10 A 301 LYS ALA PHE GLU LEU ILE SER SER ASP ASP ARG LEU THR SEQRES 11 A 301 ASP GLU VAL LYS ILE LYS VAL LEU GLN ARG LEU SER ILE SEQRES 12 A 301 ALA SER GLY HIS VAL GLY MET VAL GLY GLY GLN MET LEU SEQRES 13 A 301 ASP MET GLN SER GLU GLY GLN PRO ILE ASP LEU GLU THR SEQRES 14 A 301 LEU GLU MET ILE HIS LYS THR LYS THR GLY ALA LEU LEU SEQRES 15 A 301 THR PHE ALA VAL MET SER ALA ALA ASP ILE ALA ASN VAL SEQRES 16 A 301 ASP ASP THR THR LYS GLU HIS LEU GLU SER TYR SER TYR SEQRES 17 A 301 HIS LEU GLY MET MET PHE GLN ILE LYS ASP ASP LEU LEU SEQRES 18 A 301 ASP CYS TYR GLY ASP GLU ALA LYS LEU GLY LYS LYS VAL SEQRES 19 A 301 GLY SER ASP LEU GLU ASN ASN LYS SER THR TYR VAL SER SEQRES 20 A 301 LEU LEU GLY LYS ASP GLY ALA GLU ASP LYS LEU THR TYR SEQRES 21 A 301 HIS ARG ASP ALA ALA VAL ASP GLU LEU THR GLN ILE ASP SEQRES 22 A 301 GLU GLN PHE ASN THR LYS HIS LEU LEU GLU ILE VAL ASP SEQRES 23 A 301 LEU PHE TYR SER ARG ASP HIS LYS GLY HIS HIS HIS HIS SEQRES 24 A 301 HIS HIS SEQRES 1 B 301 MET THR ASN LEU PRO MET ASN LYS LEU ILE ASP GLU VAL SEQRES 2 B 301 ASN ASN GLU LEU SER VAL ALA ILE ASN LYS SER VAL MET SEQRES 3 B 301 ASP THR GLN LEU GLU GLU SER MET LEU TYR SER LEU ASN SEQRES 4 B 301 ALA GLY GLY LYS ARG ILE ARG PRO VAL LEU LEU LEU LEU SEQRES 5 B 301 THR LEU ASP SER LEU ASN THR GLU TYR GLU LEU GLY MET SEQRES 6 B 301 LYS SER ALA ILE ALA LEU GLU MET ILE HIS THR TYR SER SEQRES 7 B 301 LEU ILE HIS ASP ASP LEU PRO ALA MET ASP ASN ASP ASP SEQRES 8 B 301 TYR ARG ARG GLY LYS LEU THR ASN HIS LYS VAL TYR GLY SEQRES 9 B 301 GLU TRP THR ALA ILE LEU ALA GLY ASP ALA LEU LEU THR SEQRES 10 B 301 LYS ALA PHE GLU LEU ILE SER SER ASP ASP ARG LEU THR SEQRES 11 B 301 ASP GLU VAL LYS ILE LYS VAL LEU GLN ARG LEU SER ILE SEQRES 12 B 301 ALA SER GLY HIS VAL GLY MET VAL GLY GLY GLN MET LEU SEQRES 13 B 301 ASP MET GLN SER GLU GLY GLN PRO ILE ASP LEU GLU THR SEQRES 14 B 301 LEU GLU MET ILE HIS LYS THR LYS THR GLY ALA LEU LEU SEQRES 15 B 301 THR PHE ALA VAL MET SER ALA ALA ASP ILE ALA ASN VAL SEQRES 16 B 301 ASP ASP THR THR LYS GLU HIS LEU GLU SER TYR SER TYR SEQRES 17 B 301 HIS LEU GLY MET MET PHE GLN ILE LYS ASP ASP LEU LEU SEQRES 18 B 301 ASP CYS TYR GLY ASP GLU ALA LYS LEU GLY LYS LYS VAL SEQRES 19 B 301 GLY SER ASP LEU GLU ASN ASN LYS SER THR TYR VAL SER SEQRES 20 B 301 LEU LEU GLY LYS ASP GLY ALA GLU ASP LYS LEU THR TYR SEQRES 21 B 301 HIS ARG ASP ALA ALA VAL ASP GLU LEU THR GLN ILE ASP SEQRES 22 B 301 GLU GLN PHE ASN THR LYS HIS LEU LEU GLU ILE VAL ASP SEQRES 23 B 301 LEU PHE TYR SER ARG ASP HIS LYS GLY HIS HIS HIS HIS SEQRES 24 B 301 HIS HIS FORMUL 3 HOH *161(H2 O) HELIX 1 1 PRO A 5 VAL A 19 1 15 HELIX 2 2 GLN A 29 ASN A 39 1 11 HELIX 3 3 ARG A 44 LEU A 57 1 14 HELIX 4 4 GLU A 60 LEU A 63 5 4 HELIX 5 5 GLY A 64 LEU A 84 1 21 HELIX 6 6 THR A 98 GLY A 104 1 7 HELIX 7 7 GLY A 104 SER A 125 1 22 HELIX 8 8 THR A 130 GLY A 146 1 17 HELIX 9 9 GLY A 149 SER A 160 1 12 HELIX 10 10 ASP A 166 THR A 178 1 13 HELIX 11 11 THR A 178 ASN A 194 1 17 HELIX 12 12 ASP A 196 ALA A 228 1 33 HELIX 13 13 THR A 244 GLN A 271 1 28 HELIX 14 14 THR A 278 SER A 290 1 13 HELIX 15 15 PRO B 5 VAL B 19 1 15 HELIX 16 16 GLN B 29 ASN B 39 1 11 HELIX 17 17 ARG B 44 LEU B 57 1 14 HELIX 18 18 GLU B 60 LEU B 63 5 4 HELIX 19 19 GLY B 64 ASP B 83 1 20 HELIX 20 20 THR B 98 GLY B 104 1 7 HELIX 21 21 GLY B 104 SER B 125 1 22 HELIX 22 22 THR B 130 GLY B 146 1 17 HELIX 23 23 GLY B 149 SER B 160 1 12 HELIX 24 24 ASP B 166 THR B 178 1 13 HELIX 25 25 THR B 178 ASN B 194 1 17 HELIX 26 26 ASP B 196 ASP B 222 1 27 HELIX 27 27 THR B 244 GLY B 250 1 7 HELIX 28 28 GLY B 250 ILE B 272 1 23 HELIX 29 29 THR B 278 ARG B 291 1 14 SHEET 1 A 2 TYR A 92 ARG A 93 0 SHEET 2 A 2 LYS A 96 LEU A 97 -1 O LYS A 96 N ARG A 93 SHEET 1 B 2 TYR B 92 ARG B 93 0 SHEET 2 B 2 LYS B 96 LEU B 97 -1 O LYS B 96 N ARG B 93 CRYST1 150.201 150.201 163.184 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006658 0.003844 0.000000 0.00000 SCALE2 0.000000 0.007688 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006128 0.00000