data_1RUW # _entry.id 1RUW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RUW pdb_00001ruw 10.2210/pdb1ruw/pdb RCSB RCSB021054 ? ? WWPDB D_1000021054 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-01 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RUW _pdbx_database_status.recvd_initial_deposition_date 2003-12-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1oot _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kursula, P.' 1 'Kursula, I.' 2 'Lehmann, F.' 3 'Song, Y.H.' 4 'Wilmanns, M.' 5 # _citation.id primary _citation.title 'Crystal structure of the SH3 domain from S. cerevisiae Myo3' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kursula, P.' 1 ? primary 'Kursula, I.' 2 ? primary 'Lehmann, F.' 3 ? primary 'Song, Y.H.' 4 ? primary 'Wilmanns, M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Myosin-3 isoform' 7588.495 1 ? ? 'SH3 domain' ? 2 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 3 water nat water 18.015 106 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Myo3 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPV _entity_poly.pdbx_seq_one_letter_code_can KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 IMIDAZOLE IMD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ASP n 1 3 PRO n 1 4 LYS n 1 5 PHE n 1 6 GLU n 1 7 ALA n 1 8 ALA n 1 9 TYR n 1 10 ASP n 1 11 PHE n 1 12 PRO n 1 13 GLY n 1 14 SER n 1 15 GLY n 1 16 SER n 1 17 SER n 1 18 SER n 1 19 GLU n 1 20 LEU n 1 21 PRO n 1 22 LEU n 1 23 LYS n 1 24 LYS n 1 25 GLY n 1 26 ASP n 1 27 ILE n 1 28 VAL n 1 29 PHE n 1 30 ILE n 1 31 SER n 1 32 ARG n 1 33 ASP n 1 34 GLU n 1 35 PRO n 1 36 SER n 1 37 GLY n 1 38 TRP n 1 39 SER n 1 40 LEU n 1 41 ALA n 1 42 LYS n 1 43 LEU n 1 44 LEU n 1 45 ASP n 1 46 GLY n 1 47 SER n 1 48 LYS n 1 49 GLU n 1 50 GLY n 1 51 TRP n 1 52 VAL n 1 53 PRO n 1 54 THR n 1 55 ALA n 1 56 TYR n 1 57 MET n 1 58 THR n 1 59 PRO n 1 60 TYR n 1 61 LYS n 1 62 ASP n 1 63 THR n 1 64 ARG n 1 65 ASN n 1 66 THR n 1 67 VAL n 1 68 PRO n 1 69 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 VAL 69 69 69 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD 1 2510 2510 IMD IMD A . C 3 HOH 1 2511 1 HOH HOH A . C 3 HOH 2 2512 2 HOH HOH A . C 3 HOH 3 2513 3 HOH HOH A . C 3 HOH 4 2514 4 HOH HOH A . C 3 HOH 5 2515 5 HOH HOH A . C 3 HOH 6 2516 6 HOH HOH A . C 3 HOH 7 2517 7 HOH HOH A . C 3 HOH 8 2518 8 HOH HOH A . C 3 HOH 9 2519 9 HOH HOH A . C 3 HOH 10 2520 10 HOH HOH A . C 3 HOH 11 2521 11 HOH HOH A . C 3 HOH 12 2522 12 HOH HOH A . C 3 HOH 13 2523 13 HOH HOH A . C 3 HOH 14 2524 14 HOH HOH A . C 3 HOH 15 2525 15 HOH HOH A . C 3 HOH 16 2526 16 HOH HOH A . C 3 HOH 17 2527 17 HOH HOH A . C 3 HOH 18 2528 18 HOH HOH A . C 3 HOH 19 2529 19 HOH HOH A . C 3 HOH 20 2530 20 HOH HOH A . C 3 HOH 21 2531 21 HOH HOH A . C 3 HOH 22 2532 22 HOH HOH A . C 3 HOH 23 2533 23 HOH HOH A . C 3 HOH 24 2534 24 HOH HOH A . C 3 HOH 25 2535 25 HOH HOH A . C 3 HOH 26 2536 26 HOH HOH A . C 3 HOH 27 2537 27 HOH HOH A . C 3 HOH 28 2538 28 HOH HOH A . C 3 HOH 29 2539 29 HOH HOH A . C 3 HOH 30 2540 30 HOH HOH A . C 3 HOH 31 2541 31 HOH HOH A . C 3 HOH 32 2542 32 HOH HOH A . C 3 HOH 33 2543 33 HOH HOH A . C 3 HOH 34 2544 34 HOH HOH A . C 3 HOH 35 2545 35 HOH HOH A . C 3 HOH 36 2546 36 HOH HOH A . C 3 HOH 37 2547 37 HOH HOH A . C 3 HOH 38 2548 38 HOH HOH A . C 3 HOH 39 2549 39 HOH HOH A . C 3 HOH 40 2550 40 HOH HOH A . C 3 HOH 41 2551 41 HOH HOH A . C 3 HOH 42 2552 42 HOH HOH A . C 3 HOH 43 2553 43 HOH HOH A . C 3 HOH 44 2554 44 HOH HOH A . C 3 HOH 45 2555 45 HOH HOH A . C 3 HOH 46 2556 46 HOH HOH A . C 3 HOH 47 2557 47 HOH HOH A . C 3 HOH 48 2558 48 HOH HOH A . C 3 HOH 49 2559 49 HOH HOH A . C 3 HOH 50 2560 50 HOH HOH A . C 3 HOH 51 2561 51 HOH HOH A . C 3 HOH 52 2562 52 HOH HOH A . C 3 HOH 53 2563 53 HOH HOH A . C 3 HOH 54 2564 54 HOH HOH A . C 3 HOH 55 2565 55 HOH HOH A . C 3 HOH 56 2566 56 HOH HOH A . C 3 HOH 57 2567 57 HOH HOH A . C 3 HOH 58 2568 58 HOH HOH A . C 3 HOH 59 2569 59 HOH HOH A . C 3 HOH 60 2570 60 HOH HOH A . C 3 HOH 61 2571 61 HOH HOH A . C 3 HOH 62 2572 62 HOH HOH A . C 3 HOH 63 2573 63 HOH HOH A . C 3 HOH 64 2574 64 HOH HOH A . C 3 HOH 65 2575 65 HOH HOH A . C 3 HOH 66 2576 66 HOH HOH A . C 3 HOH 67 2577 67 HOH HOH A . C 3 HOH 68 2578 68 HOH HOH A . C 3 HOH 69 2579 69 HOH HOH A . C 3 HOH 70 2580 70 HOH HOH A . C 3 HOH 71 2581 71 HOH HOH A . C 3 HOH 72 2582 72 HOH HOH A . C 3 HOH 73 2583 73 HOH HOH A . C 3 HOH 74 2584 74 HOH HOH A . C 3 HOH 75 2585 75 HOH HOH A . C 3 HOH 76 2586 76 HOH HOH A . C 3 HOH 77 2587 77 HOH HOH A . C 3 HOH 78 2588 78 HOH HOH A . C 3 HOH 79 2589 79 HOH HOH A . C 3 HOH 80 2590 80 HOH HOH A . C 3 HOH 81 2591 81 HOH HOH A . C 3 HOH 82 2592 82 HOH HOH A . C 3 HOH 83 2593 83 HOH HOH A . C 3 HOH 84 2594 84 HOH HOH A . C 3 HOH 85 2595 85 HOH HOH A . C 3 HOH 86 2596 86 HOH HOH A . C 3 HOH 87 2597 87 HOH HOH A . C 3 HOH 88 2598 88 HOH HOH A . C 3 HOH 89 2599 89 HOH HOH A . C 3 HOH 90 2600 90 HOH HOH A . C 3 HOH 91 2601 91 HOH HOH A . C 3 HOH 92 2602 92 HOH HOH A . C 3 HOH 93 2603 93 HOH HOH A . C 3 HOH 94 2604 94 HOH HOH A . C 3 HOH 95 2605 95 HOH HOH A . C 3 HOH 96 2606 96 HOH HOH A . C 3 HOH 97 2607 97 HOH HOH A . C 3 HOH 98 2608 98 HOH HOH A . C 3 HOH 99 2609 99 HOH HOH A . C 3 HOH 100 2610 100 HOH HOH A . C 3 HOH 101 2611 101 HOH HOH A . C 3 HOH 102 2612 102 HOH HOH A . C 3 HOH 103 2613 103 HOH HOH A . C 3 HOH 104 2614 104 HOH HOH A . C 3 HOH 105 2615 105 HOH HOH A . C 3 HOH 106 2616 106 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 DENZO 'data reduction' . ? 2 CCP4 'data scaling' '(TRUNCATE)' ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1RUW _cell.length_a 40.330 _cell.length_b 48.000 _cell.length_c 78.860 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RUW _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1RUW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.98 _exptl_crystal.density_percent_sol 37.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details 'Ammonium sulfate, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-11-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'TRIANGULAR MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.811 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.811 # _reflns.entry_id 1RUW _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 20 _reflns.number_all 7396 _reflns.number_obs 7337 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs 0.084 _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_sigmaI 12.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.9 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs 0.295 _reflns_shell.pdbx_Rsym_value 0.367 _reflns_shell.meanI_over_sigI_obs 3.8 _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RUW _refine.ls_number_reflns_obs 6782 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.36 _refine.ls_R_factor_obs 0.17759 _refine.ls_R_factor_all 0.17759 _refine.ls_R_factor_R_work 0.17279 _refine.ls_R_factor_R_free 0.24611 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.0 _refine.ls_number_reflns_R_free 511 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.B_iso_mean 19.649 _refine.aniso_B[1][1] 1.13 _refine.aniso_B[2][2] -1.82 _refine.aniso_B[3][3] 0.69 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.132 _refine.pdbx_overall_ESU_R_Free 0.145 _refine.overall_SU_ML 0.099 _refine.overall_SU_B 3.242 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 578 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 689 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 599 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 547 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.018 1.989 ? 810 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.641 3.000 ? 1298 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.696 5.000 ? 68 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 88 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 629 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 115 'X-RAY DIFFRACTION' ? r_nbd_refined 0.183 0.200 ? 133 'X-RAY DIFFRACTION' ? r_nbd_other 0.248 0.200 ? 642 'X-RAY DIFFRACTION' ? r_nbtor_other 0.082 0.200 ? 355 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.167 0.200 ? 70 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.233 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.262 0.200 ? 78 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.165 0.200 ? 28 'X-RAY DIFFRACTION' ? r_mcbond_it 2.512 3.000 ? 355 'X-RAY DIFFRACTION' ? r_mcangle_it 3.583 5.000 ? 587 'X-RAY DIFFRACTION' ? r_scbond_it 4.174 5.000 ? 244 'X-RAY DIFFRACTION' ? r_scangle_it 5.165 6.000 ? 223 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.845 _refine_ls_shell.number_reflns_R_work 454 _refine_ls_shell.R_factor_R_work 0.22 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.282 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1RUW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1RUW _struct.title 'Crystal structure of the SH3 domain from S. cerevisiae Myo3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RUW _struct_keywords.pdbx_keywords 'CONTRACTILE PROTEIN' _struct_keywords.text 'SH3 domain, Myo3, yeast, high-throughput, structural genomics, CONTRACTILE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MYO3_YEAST _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPV _struct_ref.pdbx_align_begin 1122 _struct_ref.pdbx_db_accession P36006 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1RUW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 69 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P36006 _struct_ref_seq.db_align_beg 1122 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1190 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 69 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 49 ? PRO A 53 ? GLU A 49 PRO A 53 A 2 TRP A 38 ? LEU A 43 ? TRP A 38 LEU A 43 A 3 ILE A 27 ? ASP A 33 ? ILE A 27 ASP A 33 A 4 LYS A 4 ? ALA A 7 ? LYS A 4 ALA A 7 A 5 MET A 57 ? PRO A 59 ? MET A 57 PRO A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 52 ? O VAL A 52 N SER A 39 ? N SER A 39 A 2 3 O LYS A 42 ? O LYS A 42 N PHE A 29 ? N PHE A 29 A 3 4 O VAL A 28 ? O VAL A 28 N PHE A 5 ? N PHE A 5 A 4 5 N GLU A 6 ? N GLU A 6 O THR A 58 ? O THR A 58 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id IMD _struct_site.pdbx_auth_seq_id 2510 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE IMD A 2510' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ASP A 33 ? ASP A 33 . ? 1_555 ? 2 AC1 13 ASP A 33 ? ASP A 33 . ? 3_656 ? 3 AC1 13 GLU A 34 ? GLU A 34 . ? 1_555 ? 4 AC1 13 GLU A 34 ? GLU A 34 . ? 3_656 ? 5 AC1 13 PRO A 35 ? PRO A 35 . ? 1_555 ? 6 AC1 13 HOH C . ? HOH A 2562 . ? 4_566 ? 7 AC1 13 HOH C . ? HOH A 2562 . ? 2_665 ? 8 AC1 13 HOH C . ? HOH A 2598 . ? 4_566 ? 9 AC1 13 HOH C . ? HOH A 2598 . ? 3_656 ? 10 AC1 13 HOH C . ? HOH A 2598 . ? 2_665 ? 11 AC1 13 HOH C . ? HOH A 2598 . ? 1_555 ? 12 AC1 13 HOH C . ? HOH A 2608 . ? 1_555 ? 13 AC1 13 HOH C . ? HOH A 2608 . ? 3_656 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 2 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 138.45 _pdbx_validate_torsion.psi -37.52 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LYS _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 1 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 2 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 140.35 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2588 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLU N N N N 74 GLU CA C N S 75 GLU C C N N 76 GLU O O N N 77 GLU CB C N N 78 GLU CG C N N 79 GLU CD C N N 80 GLU OE1 O N N 81 GLU OE2 O N N 82 GLU OXT O N N 83 GLU H H N N 84 GLU H2 H N N 85 GLU HA H N N 86 GLU HB2 H N N 87 GLU HB3 H N N 88 GLU HG2 H N N 89 GLU HG3 H N N 90 GLU HE2 H N N 91 GLU HXT H N N 92 GLY N N N N 93 GLY CA C N N 94 GLY C C N N 95 GLY O O N N 96 GLY OXT O N N 97 GLY H H N N 98 GLY H2 H N N 99 GLY HA2 H N N 100 GLY HA3 H N N 101 GLY HXT H N N 102 HOH O O N N 103 HOH H1 H N N 104 HOH H2 H N N 105 ILE N N N N 106 ILE CA C N S 107 ILE C C N N 108 ILE O O N N 109 ILE CB C N S 110 ILE CG1 C N N 111 ILE CG2 C N N 112 ILE CD1 C N N 113 ILE OXT O N N 114 ILE H H N N 115 ILE H2 H N N 116 ILE HA H N N 117 ILE HB H N N 118 ILE HG12 H N N 119 ILE HG13 H N N 120 ILE HG21 H N N 121 ILE HG22 H N N 122 ILE HG23 H N N 123 ILE HD11 H N N 124 ILE HD12 H N N 125 ILE HD13 H N N 126 ILE HXT H N N 127 IMD N1 N Y N 128 IMD C2 C Y N 129 IMD N3 N Y N 130 IMD C4 C Y N 131 IMD C5 C Y N 132 IMD HN1 H N N 133 IMD H2 H N N 134 IMD HN3 H N N 135 IMD H4 H N N 136 IMD H5 H N N 137 LEU N N N N 138 LEU CA C N S 139 LEU C C N N 140 LEU O O N N 141 LEU CB C N N 142 LEU CG C N N 143 LEU CD1 C N N 144 LEU CD2 C N N 145 LEU OXT O N N 146 LEU H H N N 147 LEU H2 H N N 148 LEU HA H N N 149 LEU HB2 H N N 150 LEU HB3 H N N 151 LEU HG H N N 152 LEU HD11 H N N 153 LEU HD12 H N N 154 LEU HD13 H N N 155 LEU HD21 H N N 156 LEU HD22 H N N 157 LEU HD23 H N N 158 LEU HXT H N N 159 LYS N N N N 160 LYS CA C N S 161 LYS C C N N 162 LYS O O N N 163 LYS CB C N N 164 LYS CG C N N 165 LYS CD C N N 166 LYS CE C N N 167 LYS NZ N N N 168 LYS OXT O N N 169 LYS H H N N 170 LYS H2 H N N 171 LYS HA H N N 172 LYS HB2 H N N 173 LYS HB3 H N N 174 LYS HG2 H N N 175 LYS HG3 H N N 176 LYS HD2 H N N 177 LYS HD3 H N N 178 LYS HE2 H N N 179 LYS HE3 H N N 180 LYS HZ1 H N N 181 LYS HZ2 H N N 182 LYS HZ3 H N N 183 LYS HXT H N N 184 MET N N N N 185 MET CA C N S 186 MET C C N N 187 MET O O N N 188 MET CB C N N 189 MET CG C N N 190 MET SD S N N 191 MET CE C N N 192 MET OXT O N N 193 MET H H N N 194 MET H2 H N N 195 MET HA H N N 196 MET HB2 H N N 197 MET HB3 H N N 198 MET HG2 H N N 199 MET HG3 H N N 200 MET HE1 H N N 201 MET HE2 H N N 202 MET HE3 H N N 203 MET HXT H N N 204 PHE N N N N 205 PHE CA C N S 206 PHE C C N N 207 PHE O O N N 208 PHE CB C N N 209 PHE CG C Y N 210 PHE CD1 C Y N 211 PHE CD2 C Y N 212 PHE CE1 C Y N 213 PHE CE2 C Y N 214 PHE CZ C Y N 215 PHE OXT O N N 216 PHE H H N N 217 PHE H2 H N N 218 PHE HA H N N 219 PHE HB2 H N N 220 PHE HB3 H N N 221 PHE HD1 H N N 222 PHE HD2 H N N 223 PHE HE1 H N N 224 PHE HE2 H N N 225 PHE HZ H N N 226 PHE HXT H N N 227 PRO N N N N 228 PRO CA C N S 229 PRO C C N N 230 PRO O O N N 231 PRO CB C N N 232 PRO CG C N N 233 PRO CD C N N 234 PRO OXT O N N 235 PRO H H N N 236 PRO HA H N N 237 PRO HB2 H N N 238 PRO HB3 H N N 239 PRO HG2 H N N 240 PRO HG3 H N N 241 PRO HD2 H N N 242 PRO HD3 H N N 243 PRO HXT H N N 244 SER N N N N 245 SER CA C N S 246 SER C C N N 247 SER O O N N 248 SER CB C N N 249 SER OG O N N 250 SER OXT O N N 251 SER H H N N 252 SER H2 H N N 253 SER HA H N N 254 SER HB2 H N N 255 SER HB3 H N N 256 SER HG H N N 257 SER HXT H N N 258 THR N N N N 259 THR CA C N S 260 THR C C N N 261 THR O O N N 262 THR CB C N R 263 THR OG1 O N N 264 THR CG2 C N N 265 THR OXT O N N 266 THR H H N N 267 THR H2 H N N 268 THR HA H N N 269 THR HB H N N 270 THR HG1 H N N 271 THR HG21 H N N 272 THR HG22 H N N 273 THR HG23 H N N 274 THR HXT H N N 275 TRP N N N N 276 TRP CA C N S 277 TRP C C N N 278 TRP O O N N 279 TRP CB C N N 280 TRP CG C Y N 281 TRP CD1 C Y N 282 TRP CD2 C Y N 283 TRP NE1 N Y N 284 TRP CE2 C Y N 285 TRP CE3 C Y N 286 TRP CZ2 C Y N 287 TRP CZ3 C Y N 288 TRP CH2 C Y N 289 TRP OXT O N N 290 TRP H H N N 291 TRP H2 H N N 292 TRP HA H N N 293 TRP HB2 H N N 294 TRP HB3 H N N 295 TRP HD1 H N N 296 TRP HE1 H N N 297 TRP HE3 H N N 298 TRP HZ2 H N N 299 TRP HZ3 H N N 300 TRP HH2 H N N 301 TRP HXT H N N 302 TYR N N N N 303 TYR CA C N S 304 TYR C C N N 305 TYR O O N N 306 TYR CB C N N 307 TYR CG C Y N 308 TYR CD1 C Y N 309 TYR CD2 C Y N 310 TYR CE1 C Y N 311 TYR CE2 C Y N 312 TYR CZ C Y N 313 TYR OH O N N 314 TYR OXT O N N 315 TYR H H N N 316 TYR H2 H N N 317 TYR HA H N N 318 TYR HB2 H N N 319 TYR HB3 H N N 320 TYR HD1 H N N 321 TYR HD2 H N N 322 TYR HE1 H N N 323 TYR HE2 H N N 324 TYR HH H N N 325 TYR HXT H N N 326 VAL N N N N 327 VAL CA C N S 328 VAL C C N N 329 VAL O O N N 330 VAL CB C N N 331 VAL CG1 C N N 332 VAL CG2 C N N 333 VAL OXT O N N 334 VAL H H N N 335 VAL H2 H N N 336 VAL HA H N N 337 VAL HB H N N 338 VAL HG11 H N N 339 VAL HG12 H N N 340 VAL HG13 H N N 341 VAL HG21 H N N 342 VAL HG22 H N N 343 VAL HG23 H N N 344 VAL HXT H N N 345 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLU N CA sing N N 70 GLU N H sing N N 71 GLU N H2 sing N N 72 GLU CA C sing N N 73 GLU CA CB sing N N 74 GLU CA HA sing N N 75 GLU C O doub N N 76 GLU C OXT sing N N 77 GLU CB CG sing N N 78 GLU CB HB2 sing N N 79 GLU CB HB3 sing N N 80 GLU CG CD sing N N 81 GLU CG HG2 sing N N 82 GLU CG HG3 sing N N 83 GLU CD OE1 doub N N 84 GLU CD OE2 sing N N 85 GLU OE2 HE2 sing N N 86 GLU OXT HXT sing N N 87 GLY N CA sing N N 88 GLY N H sing N N 89 GLY N H2 sing N N 90 GLY CA C sing N N 91 GLY CA HA2 sing N N 92 GLY CA HA3 sing N N 93 GLY C O doub N N 94 GLY C OXT sing N N 95 GLY OXT HXT sing N N 96 HOH O H1 sing N N 97 HOH O H2 sing N N 98 ILE N CA sing N N 99 ILE N H sing N N 100 ILE N H2 sing N N 101 ILE CA C sing N N 102 ILE CA CB sing N N 103 ILE CA HA sing N N 104 ILE C O doub N N 105 ILE C OXT sing N N 106 ILE CB CG1 sing N N 107 ILE CB CG2 sing N N 108 ILE CB HB sing N N 109 ILE CG1 CD1 sing N N 110 ILE CG1 HG12 sing N N 111 ILE CG1 HG13 sing N N 112 ILE CG2 HG21 sing N N 113 ILE CG2 HG22 sing N N 114 ILE CG2 HG23 sing N N 115 ILE CD1 HD11 sing N N 116 ILE CD1 HD12 sing N N 117 ILE CD1 HD13 sing N N 118 ILE OXT HXT sing N N 119 IMD N1 C2 sing Y N 120 IMD N1 C5 sing Y N 121 IMD N1 HN1 sing N N 122 IMD C2 N3 doub Y N 123 IMD C2 H2 sing N N 124 IMD N3 C4 sing Y N 125 IMD N3 HN3 sing N N 126 IMD C4 C5 doub Y N 127 IMD C4 H4 sing N N 128 IMD C5 H5 sing N N 129 LEU N CA sing N N 130 LEU N H sing N N 131 LEU N H2 sing N N 132 LEU CA C sing N N 133 LEU CA CB sing N N 134 LEU CA HA sing N N 135 LEU C O doub N N 136 LEU C OXT sing N N 137 LEU CB CG sing N N 138 LEU CB HB2 sing N N 139 LEU CB HB3 sing N N 140 LEU CG CD1 sing N N 141 LEU CG CD2 sing N N 142 LEU CG HG sing N N 143 LEU CD1 HD11 sing N N 144 LEU CD1 HD12 sing N N 145 LEU CD1 HD13 sing N N 146 LEU CD2 HD21 sing N N 147 LEU CD2 HD22 sing N N 148 LEU CD2 HD23 sing N N 149 LEU OXT HXT sing N N 150 LYS N CA sing N N 151 LYS N H sing N N 152 LYS N H2 sing N N 153 LYS CA C sing N N 154 LYS CA CB sing N N 155 LYS CA HA sing N N 156 LYS C O doub N N 157 LYS C OXT sing N N 158 LYS CB CG sing N N 159 LYS CB HB2 sing N N 160 LYS CB HB3 sing N N 161 LYS CG CD sing N N 162 LYS CG HG2 sing N N 163 LYS CG HG3 sing N N 164 LYS CD CE sing N N 165 LYS CD HD2 sing N N 166 LYS CD HD3 sing N N 167 LYS CE NZ sing N N 168 LYS CE HE2 sing N N 169 LYS CE HE3 sing N N 170 LYS NZ HZ1 sing N N 171 LYS NZ HZ2 sing N N 172 LYS NZ HZ3 sing N N 173 LYS OXT HXT sing N N 174 MET N CA sing N N 175 MET N H sing N N 176 MET N H2 sing N N 177 MET CA C sing N N 178 MET CA CB sing N N 179 MET CA HA sing N N 180 MET C O doub N N 181 MET C OXT sing N N 182 MET CB CG sing N N 183 MET CB HB2 sing N N 184 MET CB HB3 sing N N 185 MET CG SD sing N N 186 MET CG HG2 sing N N 187 MET CG HG3 sing N N 188 MET SD CE sing N N 189 MET CE HE1 sing N N 190 MET CE HE2 sing N N 191 MET CE HE3 sing N N 192 MET OXT HXT sing N N 193 PHE N CA sing N N 194 PHE N H sing N N 195 PHE N H2 sing N N 196 PHE CA C sing N N 197 PHE CA CB sing N N 198 PHE CA HA sing N N 199 PHE C O doub N N 200 PHE C OXT sing N N 201 PHE CB CG sing N N 202 PHE CB HB2 sing N N 203 PHE CB HB3 sing N N 204 PHE CG CD1 doub Y N 205 PHE CG CD2 sing Y N 206 PHE CD1 CE1 sing Y N 207 PHE CD1 HD1 sing N N 208 PHE CD2 CE2 doub Y N 209 PHE CD2 HD2 sing N N 210 PHE CE1 CZ doub Y N 211 PHE CE1 HE1 sing N N 212 PHE CE2 CZ sing Y N 213 PHE CE2 HE2 sing N N 214 PHE CZ HZ sing N N 215 PHE OXT HXT sing N N 216 PRO N CA sing N N 217 PRO N CD sing N N 218 PRO N H sing N N 219 PRO CA C sing N N 220 PRO CA CB sing N N 221 PRO CA HA sing N N 222 PRO C O doub N N 223 PRO C OXT sing N N 224 PRO CB CG sing N N 225 PRO CB HB2 sing N N 226 PRO CB HB3 sing N N 227 PRO CG CD sing N N 228 PRO CG HG2 sing N N 229 PRO CG HG3 sing N N 230 PRO CD HD2 sing N N 231 PRO CD HD3 sing N N 232 PRO OXT HXT sing N N 233 SER N CA sing N N 234 SER N H sing N N 235 SER N H2 sing N N 236 SER CA C sing N N 237 SER CA CB sing N N 238 SER CA HA sing N N 239 SER C O doub N N 240 SER C OXT sing N N 241 SER CB OG sing N N 242 SER CB HB2 sing N N 243 SER CB HB3 sing N N 244 SER OG HG sing N N 245 SER OXT HXT sing N N 246 THR N CA sing N N 247 THR N H sing N N 248 THR N H2 sing N N 249 THR CA C sing N N 250 THR CA CB sing N N 251 THR CA HA sing N N 252 THR C O doub N N 253 THR C OXT sing N N 254 THR CB OG1 sing N N 255 THR CB CG2 sing N N 256 THR CB HB sing N N 257 THR OG1 HG1 sing N N 258 THR CG2 HG21 sing N N 259 THR CG2 HG22 sing N N 260 THR CG2 HG23 sing N N 261 THR OXT HXT sing N N 262 TRP N CA sing N N 263 TRP N H sing N N 264 TRP N H2 sing N N 265 TRP CA C sing N N 266 TRP CA CB sing N N 267 TRP CA HA sing N N 268 TRP C O doub N N 269 TRP C OXT sing N N 270 TRP CB CG sing N N 271 TRP CB HB2 sing N N 272 TRP CB HB3 sing N N 273 TRP CG CD1 doub Y N 274 TRP CG CD2 sing Y N 275 TRP CD1 NE1 sing Y N 276 TRP CD1 HD1 sing N N 277 TRP CD2 CE2 doub Y N 278 TRP CD2 CE3 sing Y N 279 TRP NE1 CE2 sing Y N 280 TRP NE1 HE1 sing N N 281 TRP CE2 CZ2 sing Y N 282 TRP CE3 CZ3 doub Y N 283 TRP CE3 HE3 sing N N 284 TRP CZ2 CH2 doub Y N 285 TRP CZ2 HZ2 sing N N 286 TRP CZ3 CH2 sing Y N 287 TRP CZ3 HZ3 sing N N 288 TRP CH2 HH2 sing N N 289 TRP OXT HXT sing N N 290 TYR N CA sing N N 291 TYR N H sing N N 292 TYR N H2 sing N N 293 TYR CA C sing N N 294 TYR CA CB sing N N 295 TYR CA HA sing N N 296 TYR C O doub N N 297 TYR C OXT sing N N 298 TYR CB CG sing N N 299 TYR CB HB2 sing N N 300 TYR CB HB3 sing N N 301 TYR CG CD1 doub Y N 302 TYR CG CD2 sing Y N 303 TYR CD1 CE1 sing Y N 304 TYR CD1 HD1 sing N N 305 TYR CD2 CE2 doub Y N 306 TYR CD2 HD2 sing N N 307 TYR CE1 CZ doub Y N 308 TYR CE1 HE1 sing N N 309 TYR CE2 CZ sing Y N 310 TYR CE2 HE2 sing N N 311 TYR CZ OH sing N N 312 TYR OH HH sing N N 313 TYR OXT HXT sing N N 314 VAL N CA sing N N 315 VAL N H sing N N 316 VAL N H2 sing N N 317 VAL CA C sing N N 318 VAL CA CB sing N N 319 VAL CA HA sing N N 320 VAL C O doub N N 321 VAL C OXT sing N N 322 VAL CB CG1 sing N N 323 VAL CB CG2 sing N N 324 VAL CB HB sing N N 325 VAL CG1 HG11 sing N N 326 VAL CG1 HG12 sing N N 327 VAL CG1 HG13 sing N N 328 VAL CG2 HG21 sing N N 329 VAL CG2 HG22 sing N N 330 VAL CG2 HG23 sing N N 331 VAL OXT HXT sing N N 332 # _atom_sites.entry_id 1RUW _atom_sites.fract_transf_matrix[1][1] 0.024795 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020833 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012681 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_