data_1RV1 # _entry.id 1RV1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RV1 pdb_00001rv1 10.2210/pdb1rv1/pdb RCSB RCSB021058 ? ? WWPDB D_1000021058 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YCR _pdbx_database_related.details 'STRUCTURE OF MDM2 WITH A P53 PEPTIDE BY KUSSIE ET AL.' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RV1 _pdbx_database_status.recvd_initial_deposition_date 2003-12-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lukacs, C.' 1 'Kammlott, U.' 2 'Graves, B.' 3 # _citation.id primary _citation.title 'In vivo activation of the p53 pathway by small-molecule antagonists of MDM2.' _citation.journal_abbrev Science _citation.journal_volume 303 _citation.page_first 844 _citation.page_last 848 _citation.year 2004 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14704432 _citation.pdbx_database_id_DOI 10.1126/science.1092472 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vassilev, L.T.' 1 ? primary 'Vu, B.T.' 2 ? primary 'Graves, B.' 3 ? primary 'Carvajal, D.' 4 ? primary 'Podlaski, F.' 5 ? primary 'Filipovic, Z.' 6 ? primary 'Kong, N.' 7 ? primary 'Kammlott, U.' 8 ? primary 'Lukacs, C.' 9 ? primary 'Klein, C.' 10 ? primary 'Fotouhi, N.' 11 ? primary 'Liu, E.A.' 12 ? # _cell.entry_id 1RV1 _cell.length_a 122.264 _cell.length_b 39.727 _cell.length_c 79.362 _cell.angle_alpha 90.00 _cell.angle_beta 114.29 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RV1 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin-protein ligase E3 Mdm2' 10060.845 3 6.3.2.- L33E 'RESIDUES 25-109' ? 2 non-polymer syn 'CIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE' 686.434 5 ? ? ? ? 3 water nat water 18.015 31 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'p53-binding protein Mdm2, Oncoprotein Mdm2, Double minute 2 protein, Hdm2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ETLVRPKPELLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIY RNLVV ; _entity_poly.pdbx_seq_one_letter_code_can ;ETLVRPKPELLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIY RNLVV ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 LEU n 1 4 VAL n 1 5 ARG n 1 6 PRO n 1 7 LYS n 1 8 PRO n 1 9 GLU n 1 10 LEU n 1 11 LEU n 1 12 LYS n 1 13 LEU n 1 14 LEU n 1 15 LYS n 1 16 SER n 1 17 VAL n 1 18 GLY n 1 19 ALA n 1 20 GLN n 1 21 LYS n 1 22 ASP n 1 23 THR n 1 24 TYR n 1 25 THR n 1 26 MET n 1 27 LYS n 1 28 GLU n 1 29 VAL n 1 30 LEU n 1 31 PHE n 1 32 TYR n 1 33 LEU n 1 34 GLY n 1 35 GLN n 1 36 TYR n 1 37 ILE n 1 38 MET n 1 39 THR n 1 40 LYS n 1 41 ARG n 1 42 LEU n 1 43 TYR n 1 44 ASP n 1 45 GLU n 1 46 LYS n 1 47 GLN n 1 48 GLN n 1 49 HIS n 1 50 ILE n 1 51 VAL n 1 52 TYR n 1 53 CYS n 1 54 SER n 1 55 ASN n 1 56 ASP n 1 57 LEU n 1 58 LEU n 1 59 GLY n 1 60 ASP n 1 61 LEU n 1 62 PHE n 1 63 GLY n 1 64 VAL n 1 65 PRO n 1 66 SER n 1 67 PHE n 1 68 SER n 1 69 VAL n 1 70 LYS n 1 71 GLU n 1 72 HIS n 1 73 ARG n 1 74 LYS n 1 75 ILE n 1 76 TYR n 1 77 THR n 1 78 MET n 1 79 ILE n 1 80 TYR n 1 81 ARG n 1 82 ASN n 1 83 LEU n 1 84 VAL n 1 85 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene MDM2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE40 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MDM2_HUMAN _struct_ref.pdbx_db_accession Q00987 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIY RNLVV ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RV1 A 1 ? 85 ? Q00987 25 ? 109 ? 25 109 2 1 1RV1 B 1 ? 85 ? Q00987 25 ? 109 ? 25 109 3 1 1RV1 C 1 ? 85 ? Q00987 25 ? 109 ? 25 109 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1RV1 GLU A 9 ? UNP Q00987 LEU 33 'engineered mutation' 33 1 2 1RV1 GLU B 9 ? UNP Q00987 LEU 33 'engineered mutation' 33 2 3 1RV1 GLU C 9 ? UNP Q00987 LEU 33 'engineered mutation' 33 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMZ non-polymer . 'CIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE' ? 'C31 H34 Br2 N4 O4' 686.434 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RV1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.72 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.91 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_details ;54% SATD, AMMONIUM SULFATE, 2.5% PEG 200, 50mM GLUCOSE, 5mM DTT, 100mM TRIS, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 278K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-05-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.100 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X8C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X8C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.100 # _reflns.entry_id 1RV1 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 50.0 _reflns.number_all 15502 _reflns.number_obs 15502 _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.0 _reflns.B_iso_Wilson_estimate 41.7 _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 96.4 _reflns_shell.Rmerge_I_obs 0.249 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.4 _reflns_shell.pdbx_redundancy 3.47 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1515 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RV1 _refine.ls_d_res_high 2.30 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 15376 _refine.ls_number_reflns_obs 15376 _refine.ls_number_reflns_R_free 784 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.266 _refine.ls_R_factor_R_work 0.256 _refine.ls_R_factor_R_free 0.322 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1YCR' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2121 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 205 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 2357 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.5388 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.0089 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_all _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_all 15 2.30 2.35 . 0.3598 . 0.403 . . 922 979 . . 'X-RAY DIFFRACTION' . 15 2.35 2.41 . 0.3851 . 0.4847 . . 943 993 . . 'X-RAY DIFFRACTION' . 15 2.41 2.48 . 0.3431 . 0.4147 . . 988 1035 . . 'X-RAY DIFFRACTION' . 15 2.48 2.55 . 0.3348 . 0.3448 . . 934 986 . . 'X-RAY DIFFRACTION' . 15 2.55 2.63 . 0.3227 . 0.3331 . . 957 997 . . 'X-RAY DIFFRACTION' . 15 2.63 2.73 . 0.3151 . 0.4655 . . 963 1020 . . 'X-RAY DIFFRACTION' . 15 2.73 2.83 . 0.327 . 0.3218 . . 980 1031 . . 'X-RAY DIFFRACTION' . 15 2.83 2.96 . 0.3116 . 0.3278 . . 962 1013 . . 'X-RAY DIFFRACTION' . 15 2.96 3.12 . 0.3173 . 0.3495 . . 958 1013 . . 'X-RAY DIFFRACTION' . 15 3.12 3.31 . 0.2817 . 0.322 . . 992 1055 . . 'X-RAY DIFFRACTION' . 15 3.31 3.57 . 0.2655 . 0.3111 . . 972 1027 . . 'X-RAY DIFFRACTION' . 15 3.57 3.93 . 0.244 . 0.2744 . . 981 1029 . . 'X-RAY DIFFRACTION' . 15 3.93 4.49 . 0.2162 . 0.3008 . . 994 1048 . . 'X-RAY DIFFRACTION' . 15 4.49 5.63 . 0.2258 . 0.3057 . . 1004 1061 . . 'X-RAY DIFFRACTION' . 15 5.63 20.0 . 0.2227 . 0.2772 . . 1042 1089 . . 'X-RAY DIFFRACTION' . # _struct.entry_id 1RV1 _struct.title 'CRYSTAL STRUCTURE OF HUMAN MDM2 WITH AN IMIDAZOLINE INHIBITOR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RV1 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'MDM2, P53, PROTEIN-PROTEIN INTERACTION, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 7 ? SER A 16 ? LYS A 31 SER A 40 1 ? 10 HELX_P HELX_P2 2 MET A 26 ? LYS A 40 ? MET A 50 LYS A 64 1 ? 15 HELX_P HELX_P3 3 ASP A 56 ? GLY A 63 ? ASP A 80 GLY A 87 1 ? 8 HELX_P HELX_P4 4 GLU A 71 ? ARG A 81 ? GLU A 95 ARG A 105 1 ? 11 HELX_P HELX_P5 5 LYS B 7 ? VAL B 17 ? LYS B 31 VAL B 41 1 ? 11 HELX_P HELX_P6 6 MET B 26 ? LYS B 40 ? MET B 50 LYS B 64 1 ? 15 HELX_P HELX_P7 7 ASP B 56 ? GLY B 63 ? ASP B 80 GLY B 87 1 ? 8 HELX_P HELX_P8 8 GLU B 71 ? ARG B 81 ? GLU B 95 ARG B 105 1 ? 11 HELX_P HELX_P9 9 LYS C 7 ? VAL C 17 ? LYS C 31 VAL C 41 1 ? 11 HELX_P HELX_P10 10 MET C 26 ? ARG C 41 ? MET C 50 ARG C 65 1 ? 16 HELX_P HELX_P11 11 ASP C 56 ? GLY C 63 ? ASP C 80 GLY C 87 1 ? 8 HELX_P HELX_P12 12 GLU C 71 ? ARG C 81 ? GLU C 95 ARG C 105 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 2 ? E ? 3 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 3 ? VAL A 4 ? LEU A 27 VAL A 28 A 2 TYR A 24 ? THR A 25 ? TYR A 48 THR A 49 B 1 TYR A 43 ? ASP A 44 ? TYR A 67 ASP A 68 B 2 GLN A 47 ? TYR A 52 ? GLN A 71 TYR A 76 B 3 SER A 66 ? SER A 68 ? SER A 90 SER A 92 C 1 LEU B 3 ? VAL B 4 ? LEU B 27 VAL B 28 C 2 TYR B 24 ? THR B 25 ? TYR B 48 THR B 49 D 1 ILE B 50 ? TYR B 52 ? ILE B 74 TYR B 76 D 2 SER B 66 ? SER B 68 ? SER B 90 SER B 92 E 1 TYR C 24 ? THR C 25 ? TYR C 48 THR C 49 E 2 LEU C 3 ? PRO C 6 ? LEU C 27 PRO C 30 E 3 LEU C 83 ? VAL C 84 ? LEU C 107 VAL C 108 F 1 TYR C 43 ? ASP C 44 ? TYR C 67 ASP C 68 F 2 GLN C 47 ? TYR C 52 ? GLN C 71 TYR C 76 F 3 SER C 66 ? SER C 68 ? SER C 90 SER C 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 4 ? N VAL A 28 O TYR A 24 ? O TYR A 48 B 1 2 N ASP A 44 ? N ASP A 68 O ILE A 50 ? O ILE A 74 B 2 3 N VAL A 51 ? N VAL A 75 O PHE A 67 ? O PHE A 91 C 1 2 N VAL B 4 ? N VAL B 28 O TYR B 24 ? O TYR B 48 D 1 2 N VAL B 51 ? N VAL B 75 O PHE B 67 ? O PHE B 91 E 1 2 O TYR C 24 ? O TYR C 48 N VAL C 4 ? N VAL C 28 E 2 3 N ARG C 5 ? N ARG C 29 O VAL C 84 ? O VAL C 108 F 1 2 N ASP C 44 ? N ASP C 68 O ILE C 50 ? O ILE C 74 F 2 3 N VAL C 51 ? N VAL C 75 O PHE C 67 ? O PHE C 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IMZ 110 ? 15 'BINDING SITE FOR RESIDUE IMZ A 110' AC2 Software B IMZ 110 ? 12 'BINDING SITE FOR RESIDUE IMZ B 110' AC3 Software C IMZ 110 ? 13 'BINDING SITE FOR RESIDUE IMZ C 110' AC4 Software A IMZ 111 ? 10 'BINDING SITE FOR RESIDUE IMZ A 111' AC5 Software B IMZ 111 ? 11 'BINDING SITE FOR RESIDUE IMZ B 111' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 HOH I . ? HOH A 10 . ? 1_555 ? 2 AC1 15 HOH I . ? HOH A 20 . ? 1_555 ? 3 AC1 15 LEU A 30 ? LEU A 54 . ? 1_555 ? 4 AC1 15 GLY A 34 ? GLY A 58 . ? 1_555 ? 5 AC1 15 ILE A 37 ? ILE A 61 . ? 1_555 ? 6 AC1 15 MET A 38 ? MET A 62 . ? 1_555 ? 7 AC1 15 GLN A 48 ? GLN A 72 . ? 1_555 ? 8 AC1 15 HIS A 49 ? HIS A 73 . ? 1_555 ? 9 AC1 15 VAL A 69 ? VAL A 93 . ? 1_555 ? 10 AC1 15 HIS A 72 ? HIS A 96 . ? 1_555 ? 11 AC1 15 HOH K . ? HOH C 9 . ? 1_555 ? 12 AC1 15 LEU C 30 ? LEU C 54 . ? 1_555 ? 13 AC1 15 HIS C 72 ? HIS C 96 . ? 1_555 ? 14 AC1 15 TYR C 76 ? TYR C 100 . ? 1_555 ? 15 AC1 15 IMZ H . ? IMZ C 110 . ? 1_555 ? 16 AC2 12 LEU B 30 ? LEU B 54 . ? 1_555 ? 17 AC2 12 LEU B 30 ? LEU B 54 . ? 2_656 ? 18 AC2 12 GLY B 34 ? GLY B 58 . ? 1_555 ? 19 AC2 12 MET B 38 ? MET B 62 . ? 1_555 ? 20 AC2 12 GLN B 48 ? GLN B 72 . ? 1_555 ? 21 AC2 12 HIS B 49 ? HIS B 73 . ? 1_555 ? 22 AC2 12 VAL B 69 ? VAL B 93 . ? 1_555 ? 23 AC2 12 HIS B 72 ? HIS B 96 . ? 1_555 ? 24 AC2 12 HIS B 72 ? HIS B 96 . ? 2_656 ? 25 AC2 12 TYR B 76 ? TYR B 100 . ? 2_656 ? 26 AC2 12 IMZ G . ? IMZ B 111 . ? 2_656 ? 27 AC2 12 HOH J . ? HOH B 120 . ? 1_555 ? 28 AC3 13 LEU A 30 ? LEU A 54 . ? 1_555 ? 29 AC3 13 HIS A 72 ? HIS A 96 . ? 1_555 ? 30 AC3 13 TYR A 76 ? TYR A 100 . ? 1_555 ? 31 AC3 13 IMZ D . ? IMZ A 110 . ? 1_555 ? 32 AC3 13 IMZ E . ? IMZ A 111 . ? 1_555 ? 33 AC3 13 HOH K . ? HOH C 9 . ? 1_555 ? 34 AC3 13 LEU C 30 ? LEU C 54 . ? 1_555 ? 35 AC3 13 GLY C 34 ? GLY C 58 . ? 1_555 ? 36 AC3 13 MET C 38 ? MET C 62 . ? 1_555 ? 37 AC3 13 GLN C 48 ? GLN C 72 . ? 1_555 ? 38 AC3 13 HIS C 49 ? HIS C 73 . ? 1_555 ? 39 AC3 13 VAL C 69 ? VAL C 93 . ? 1_555 ? 40 AC3 13 HIS C 72 ? HIS C 96 . ? 1_555 ? 41 AC4 10 HOH I . ? HOH A 8 . ? 1_555 ? 42 AC4 10 HOH I . ? HOH A 13 . ? 1_555 ? 43 AC4 10 HOH I . ? HOH A 22 . ? 1_555 ? 44 AC4 10 THR A 2 ? THR A 26 . ? 1_555 ? 45 AC4 10 MET A 26 ? MET A 50 . ? 1_555 ? 46 AC4 10 TYR A 76 ? TYR A 100 . ? 1_555 ? 47 AC4 10 THR B 2 ? THR B 26 . ? 1_555 ? 48 AC4 10 IMZ G . ? IMZ B 111 . ? 1_555 ? 49 AC4 10 GLU C 45 ? GLU C 69 . ? 1_555 ? 50 AC4 10 IMZ H . ? IMZ C 110 . ? 1_555 ? 51 AC5 11 HOH I . ? HOH A 22 . ? 1_555 ? 52 AC5 11 THR A 2 ? THR A 26 . ? 1_555 ? 53 AC5 11 IMZ E . ? IMZ A 111 . ? 1_555 ? 54 AC5 11 THR B 2 ? THR B 26 . ? 1_555 ? 55 AC5 11 MET B 26 ? MET B 50 . ? 1_555 ? 56 AC5 11 GLU B 45 ? GLU B 69 . ? 2_656 ? 57 AC5 11 LYS B 46 ? LYS B 70 . ? 2_656 ? 58 AC5 11 GLN B 48 ? GLN B 72 . ? 2_656 ? 59 AC5 11 TYR B 76 ? TYR B 100 . ? 1_555 ? 60 AC5 11 TYR B 80 ? TYR B 104 . ? 1_555 ? 61 AC5 11 IMZ F . ? IMZ B 110 . ? 2_656 ? # _database_PDB_matrix.entry_id 1RV1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RV1 _atom_sites.fract_transf_matrix[1][1] 0.008179 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003691 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025172 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013824 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 25 25 GLU GLU A . n A 1 2 THR 2 26 26 THR THR A . n A 1 3 LEU 3 27 27 LEU LEU A . n A 1 4 VAL 4 28 28 VAL VAL A . n A 1 5 ARG 5 29 29 ARG ARG A . n A 1 6 PRO 6 30 30 PRO PRO A . n A 1 7 LYS 7 31 31 LYS LYS A . n A 1 8 PRO 8 32 32 PRO PRO A . n A 1 9 GLU 9 33 33 GLU GLU A . n A 1 10 LEU 10 34 34 LEU LEU A . n A 1 11 LEU 11 35 35 LEU LEU A . n A 1 12 LYS 12 36 36 LYS LYS A . n A 1 13 LEU 13 37 37 LEU LEU A . n A 1 14 LEU 14 38 38 LEU LEU A . n A 1 15 LYS 15 39 39 LYS LYS A . n A 1 16 SER 16 40 40 SER SER A . n A 1 17 VAL 17 41 41 VAL VAL A . n A 1 18 GLY 18 42 42 GLY GLY A . n A 1 19 ALA 19 43 43 ALA ALA A . n A 1 20 GLN 20 44 44 GLN GLN A . n A 1 21 LYS 21 45 45 LYS LYS A . n A 1 22 ASP 22 46 46 ASP ASP A . n A 1 23 THR 23 47 47 THR THR A . n A 1 24 TYR 24 48 48 TYR TYR A . n A 1 25 THR 25 49 49 THR THR A . n A 1 26 MET 26 50 50 MET MET A . n A 1 27 LYS 27 51 51 LYS LYS A . n A 1 28 GLU 28 52 52 GLU GLU A . n A 1 29 VAL 29 53 53 VAL VAL A . n A 1 30 LEU 30 54 54 LEU LEU A . n A 1 31 PHE 31 55 55 PHE PHE A . n A 1 32 TYR 32 56 56 TYR TYR A . n A 1 33 LEU 33 57 57 LEU LEU A . n A 1 34 GLY 34 58 58 GLY GLY A . n A 1 35 GLN 35 59 59 GLN GLN A . n A 1 36 TYR 36 60 60 TYR TYR A . n A 1 37 ILE 37 61 61 ILE ILE A . n A 1 38 MET 38 62 62 MET MET A . n A 1 39 THR 39 63 63 THR THR A . n A 1 40 LYS 40 64 64 LYS LYS A . n A 1 41 ARG 41 65 65 ARG ARG A . n A 1 42 LEU 42 66 66 LEU LEU A . n A 1 43 TYR 43 67 67 TYR TYR A . n A 1 44 ASP 44 68 68 ASP ASP A . n A 1 45 GLU 45 69 69 GLU GLU A . n A 1 46 LYS 46 70 70 LYS LYS A . n A 1 47 GLN 47 71 71 GLN GLN A . n A 1 48 GLN 48 72 72 GLN GLN A . n A 1 49 HIS 49 73 73 HIS HIS A . n A 1 50 ILE 50 74 74 ILE ILE A . n A 1 51 VAL 51 75 75 VAL VAL A . n A 1 52 TYR 52 76 76 TYR TYR A . n A 1 53 CYS 53 77 77 CYS CYS A . n A 1 54 SER 54 78 78 SER SER A . n A 1 55 ASN 55 79 79 ASN ASN A . n A 1 56 ASP 56 80 80 ASP ASP A . n A 1 57 LEU 57 81 81 LEU LEU A . n A 1 58 LEU 58 82 82 LEU LEU A . n A 1 59 GLY 59 83 83 GLY GLY A . n A 1 60 ASP 60 84 84 ASP ASP A . n A 1 61 LEU 61 85 85 LEU LEU A . n A 1 62 PHE 62 86 86 PHE PHE A . n A 1 63 GLY 63 87 87 GLY GLY A . n A 1 64 VAL 64 88 88 VAL VAL A . n A 1 65 PRO 65 89 89 PRO PRO A . n A 1 66 SER 66 90 90 SER SER A . n A 1 67 PHE 67 91 91 PHE PHE A . n A 1 68 SER 68 92 92 SER SER A . n A 1 69 VAL 69 93 93 VAL VAL A . n A 1 70 LYS 70 94 94 LYS LYS A . n A 1 71 GLU 71 95 95 GLU GLU A . n A 1 72 HIS 72 96 96 HIS HIS A . n A 1 73 ARG 73 97 97 ARG ARG A . n A 1 74 LYS 74 98 98 LYS LYS A . n A 1 75 ILE 75 99 99 ILE ILE A . n A 1 76 TYR 76 100 100 TYR TYR A . n A 1 77 THR 77 101 101 THR THR A . n A 1 78 MET 78 102 102 MET MET A . n A 1 79 ILE 79 103 103 ILE ILE A . n A 1 80 TYR 80 104 104 TYR TYR A . n A 1 81 ARG 81 105 105 ARG ARG A . n A 1 82 ASN 82 106 106 ASN ASN A . n A 1 83 LEU 83 107 107 LEU LEU A . n A 1 84 VAL 84 108 108 VAL VAL A . n A 1 85 VAL 85 109 109 VAL VAL A . n B 1 1 GLU 1 25 25 GLU GLU B . n B 1 2 THR 2 26 26 THR THR B . n B 1 3 LEU 3 27 27 LEU LEU B . n B 1 4 VAL 4 28 28 VAL VAL B . n B 1 5 ARG 5 29 29 ARG ARG B . n B 1 6 PRO 6 30 30 PRO PRO B . n B 1 7 LYS 7 31 31 LYS LYS B . n B 1 8 PRO 8 32 32 PRO PRO B . n B 1 9 GLU 9 33 33 GLU GLU B . n B 1 10 LEU 10 34 34 LEU LEU B . n B 1 11 LEU 11 35 35 LEU LEU B . n B 1 12 LYS 12 36 36 LYS LYS B . n B 1 13 LEU 13 37 37 LEU LEU B . n B 1 14 LEU 14 38 38 LEU LEU B . n B 1 15 LYS 15 39 39 LYS LYS B . n B 1 16 SER 16 40 40 SER SER B . n B 1 17 VAL 17 41 41 VAL VAL B . n B 1 18 GLY 18 42 42 GLY GLY B . n B 1 19 ALA 19 43 43 ALA ALA B . n B 1 20 GLN 20 44 44 GLN GLN B . n B 1 21 LYS 21 45 45 LYS LYS B . n B 1 22 ASP 22 46 46 ASP ASP B . n B 1 23 THR 23 47 47 THR THR B . n B 1 24 TYR 24 48 48 TYR TYR B . n B 1 25 THR 25 49 49 THR THR B . n B 1 26 MET 26 50 50 MET MET B . n B 1 27 LYS 27 51 51 LYS LYS B . n B 1 28 GLU 28 52 52 GLU GLU B . n B 1 29 VAL 29 53 53 VAL VAL B . n B 1 30 LEU 30 54 54 LEU LEU B . n B 1 31 PHE 31 55 55 PHE PHE B . n B 1 32 TYR 32 56 56 TYR TYR B . n B 1 33 LEU 33 57 57 LEU LEU B . n B 1 34 GLY 34 58 58 GLY GLY B . n B 1 35 GLN 35 59 59 GLN GLN B . n B 1 36 TYR 36 60 60 TYR TYR B . n B 1 37 ILE 37 61 61 ILE ILE B . n B 1 38 MET 38 62 62 MET MET B . n B 1 39 THR 39 63 63 THR THR B . n B 1 40 LYS 40 64 64 LYS LYS B . n B 1 41 ARG 41 65 65 ARG ARG B . n B 1 42 LEU 42 66 66 LEU LEU B . n B 1 43 TYR 43 67 67 TYR TYR B . n B 1 44 ASP 44 68 68 ASP ASP B . n B 1 45 GLU 45 69 69 GLU GLU B . n B 1 46 LYS 46 70 70 LYS LYS B . n B 1 47 GLN 47 71 71 GLN GLN B . n B 1 48 GLN 48 72 72 GLN GLN B . n B 1 49 HIS 49 73 73 HIS HIS B . n B 1 50 ILE 50 74 74 ILE ILE B . n B 1 51 VAL 51 75 75 VAL VAL B . n B 1 52 TYR 52 76 76 TYR TYR B . n B 1 53 CYS 53 77 77 CYS CYS B . n B 1 54 SER 54 78 78 SER SER B . n B 1 55 ASN 55 79 79 ASN ASN B . n B 1 56 ASP 56 80 80 ASP ASP B . n B 1 57 LEU 57 81 81 LEU LEU B . n B 1 58 LEU 58 82 82 LEU LEU B . n B 1 59 GLY 59 83 83 GLY GLY B . n B 1 60 ASP 60 84 84 ASP ASP B . n B 1 61 LEU 61 85 85 LEU LEU B . n B 1 62 PHE 62 86 86 PHE PHE B . n B 1 63 GLY 63 87 87 GLY GLY B . n B 1 64 VAL 64 88 88 VAL VAL B . n B 1 65 PRO 65 89 89 PRO PRO B . n B 1 66 SER 66 90 90 SER SER B . n B 1 67 PHE 67 91 91 PHE PHE B . n B 1 68 SER 68 92 92 SER SER B . n B 1 69 VAL 69 93 93 VAL VAL B . n B 1 70 LYS 70 94 94 LYS LYS B . n B 1 71 GLU 71 95 95 GLU GLU B . n B 1 72 HIS 72 96 96 HIS HIS B . n B 1 73 ARG 73 97 97 ARG ARG B . n B 1 74 LYS 74 98 98 LYS LYS B . n B 1 75 ILE 75 99 99 ILE ILE B . n B 1 76 TYR 76 100 100 TYR TYR B . n B 1 77 THR 77 101 101 THR THR B . n B 1 78 MET 78 102 102 MET MET B . n B 1 79 ILE 79 103 103 ILE ILE B . n B 1 80 TYR 80 104 104 TYR TYR B . n B 1 81 ARG 81 105 105 ARG ARG B . n B 1 82 ASN 82 106 106 ASN ASN B . n B 1 83 LEU 83 107 107 LEU LEU B . n B 1 84 VAL 84 108 108 VAL VAL B . n B 1 85 VAL 85 109 109 VAL VAL B . n C 1 1 GLU 1 25 25 GLU GLU C . n C 1 2 THR 2 26 26 THR THR C . n C 1 3 LEU 3 27 27 LEU LEU C . n C 1 4 VAL 4 28 28 VAL VAL C . n C 1 5 ARG 5 29 29 ARG ARG C . n C 1 6 PRO 6 30 30 PRO PRO C . n C 1 7 LYS 7 31 31 LYS LYS C . n C 1 8 PRO 8 32 32 PRO PRO C . n C 1 9 GLU 9 33 33 GLU GLU C . n C 1 10 LEU 10 34 34 LEU LEU C . n C 1 11 LEU 11 35 35 LEU LEU C . n C 1 12 LYS 12 36 36 LYS LYS C . n C 1 13 LEU 13 37 37 LEU LEU C . n C 1 14 LEU 14 38 38 LEU LEU C . n C 1 15 LYS 15 39 39 LYS LYS C . n C 1 16 SER 16 40 40 SER SER C . n C 1 17 VAL 17 41 41 VAL VAL C . n C 1 18 GLY 18 42 42 GLY GLY C . n C 1 19 ALA 19 43 43 ALA ALA C . n C 1 20 GLN 20 44 44 GLN GLN C . n C 1 21 LYS 21 45 45 LYS LYS C . n C 1 22 ASP 22 46 46 ASP ASP C . n C 1 23 THR 23 47 47 THR THR C . n C 1 24 TYR 24 48 48 TYR TYR C . n C 1 25 THR 25 49 49 THR THR C . n C 1 26 MET 26 50 50 MET MET C . n C 1 27 LYS 27 51 51 LYS LYS C . n C 1 28 GLU 28 52 52 GLU GLU C . n C 1 29 VAL 29 53 53 VAL VAL C . n C 1 30 LEU 30 54 54 LEU LEU C . n C 1 31 PHE 31 55 55 PHE PHE C . n C 1 32 TYR 32 56 56 TYR TYR C . n C 1 33 LEU 33 57 57 LEU LEU C . n C 1 34 GLY 34 58 58 GLY GLY C . n C 1 35 GLN 35 59 59 GLN GLN C . n C 1 36 TYR 36 60 60 TYR TYR C . n C 1 37 ILE 37 61 61 ILE ILE C . n C 1 38 MET 38 62 62 MET MET C . n C 1 39 THR 39 63 63 THR THR C . n C 1 40 LYS 40 64 64 LYS LYS C . n C 1 41 ARG 41 65 65 ARG ARG C . n C 1 42 LEU 42 66 66 LEU LEU C . n C 1 43 TYR 43 67 67 TYR TYR C . n C 1 44 ASP 44 68 68 ASP ASP C . n C 1 45 GLU 45 69 69 GLU GLU C . n C 1 46 LYS 46 70 70 LYS LYS C . n C 1 47 GLN 47 71 71 GLN GLN C . n C 1 48 GLN 48 72 72 GLN GLN C . n C 1 49 HIS 49 73 73 HIS HIS C . n C 1 50 ILE 50 74 74 ILE ILE C . n C 1 51 VAL 51 75 75 VAL VAL C . n C 1 52 TYR 52 76 76 TYR TYR C . n C 1 53 CYS 53 77 77 CYS CYS C . n C 1 54 SER 54 78 78 SER SER C . n C 1 55 ASN 55 79 79 ASN ASN C . n C 1 56 ASP 56 80 80 ASP ASP C . n C 1 57 LEU 57 81 81 LEU LEU C . n C 1 58 LEU 58 82 82 LEU LEU C . n C 1 59 GLY 59 83 83 GLY GLY C . n C 1 60 ASP 60 84 84 ASP ASP C . n C 1 61 LEU 61 85 85 LEU LEU C . n C 1 62 PHE 62 86 86 PHE PHE C . n C 1 63 GLY 63 87 87 GLY GLY C . n C 1 64 VAL 64 88 88 VAL VAL C . n C 1 65 PRO 65 89 89 PRO PRO C . n C 1 66 SER 66 90 90 SER SER C . n C 1 67 PHE 67 91 91 PHE PHE C . n C 1 68 SER 68 92 92 SER SER C . n C 1 69 VAL 69 93 93 VAL VAL C . n C 1 70 LYS 70 94 94 LYS LYS C . n C 1 71 GLU 71 95 95 GLU GLU C . n C 1 72 HIS 72 96 96 HIS HIS C . n C 1 73 ARG 73 97 97 ARG ARG C . n C 1 74 LYS 74 98 98 LYS LYS C . n C 1 75 ILE 75 99 99 ILE ILE C . n C 1 76 TYR 76 100 100 TYR TYR C . n C 1 77 THR 77 101 101 THR THR C . n C 1 78 MET 78 102 102 MET MET C . n C 1 79 ILE 79 103 103 ILE ILE C . n C 1 80 TYR 80 104 104 TYR TYR C . n C 1 81 ARG 81 105 105 ARG ARG C . n C 1 82 ASN 82 106 106 ASN ASN C . n C 1 83 LEU 83 107 107 LEU LEU C . n C 1 84 VAL 84 108 108 VAL VAL C . n C 1 85 VAL 85 109 109 VAL VAL C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 IMZ 1 110 1 IMZ IMZ A . E 2 IMZ 1 111 1 IMZ IMZ A . F 2 IMZ 1 110 1 IMZ IMZ B . G 2 IMZ 1 111 1 IMZ IMZ B . H 2 IMZ 1 110 1 IMZ IMZ C . I 3 HOH 1 1 1 HOH HOH A . I 3 HOH 2 2 2 HOH HOH A . I 3 HOH 3 3 3 HOH HOH A . I 3 HOH 4 4 4 HOH HOH A . I 3 HOH 5 5 5 HOH HOH A . I 3 HOH 6 6 6 HOH HOH A . I 3 HOH 7 7 7 HOH HOH A . I 3 HOH 8 8 8 HOH HOH A . I 3 HOH 9 10 10 HOH HOH A . I 3 HOH 10 11 11 HOH HOH A . I 3 HOH 11 12 12 HOH HOH A . I 3 HOH 12 13 13 HOH HOH A . I 3 HOH 13 14 14 HOH HOH A . I 3 HOH 14 15 15 HOH HOH A . I 3 HOH 15 16 16 HOH HOH A . I 3 HOH 16 17 17 HOH HOH A . I 3 HOH 17 18 18 HOH HOH A . I 3 HOH 18 19 19 HOH HOH A . I 3 HOH 19 20 20 HOH HOH A . I 3 HOH 20 21 21 HOH HOH A . I 3 HOH 21 22 22 HOH HOH A . J 3 HOH 1 112 1 HOH HOH B . J 3 HOH 2 113 2 HOH HOH B . J 3 HOH 3 114 3 HOH HOH B . J 3 HOH 4 115 4 HOH HOH B . J 3 HOH 5 116 5 HOH HOH B . J 3 HOH 6 117 6 HOH HOH B . J 3 HOH 7 118 7 HOH HOH B . J 3 HOH 8 119 8 HOH HOH B . J 3 HOH 9 120 9 HOH HOH B . K 3 HOH 1 9 9 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-01-20 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 MOLREP phasing . ? 3 CNX refinement 2000.1 ? 4 HKL-2000 'data reduction' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 45 ? ? -120.71 -167.19 2 1 GLN A 71 ? ? -162.24 79.77 3 1 VAL A 108 ? ? -76.12 39.05 4 1 LYS B 45 ? ? -110.53 -167.95 5 1 MET C 62 ? ? -55.05 -73.41 6 1 GLN C 71 ? ? -161.38 81.55 7 1 SER C 78 ? ? -47.27 159.40 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE' IMZ 3 water HOH #