data_1S03 # _entry.id 1S03 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1S03 pdb_00001s03 10.2210/pdb1s03/pdb NDB PR0111 ? ? RCSB RCSB021197 ? ? WWPDB D_1000021197 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1S03 _pdbx_database_status.recvd_initial_deposition_date 2003-12-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Merianos, H.J.' 1 'Wang, J.' 2 'Moore, P.B.' 3 # _citation.id primary _citation.title 'The structure of a ribosomal protein S8/spc operon mRNA complex.' _citation.journal_abbrev RNA _citation.journal_volume 10 _citation.page_first 954 _citation.page_last 964 _citation.year 2004 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15146079 _citation.pdbx_database_id_DOI 10.1261/rna.7030704 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Merianos, H.J.' 1 ? primary 'Wang, J.' 2 ? primary 'Moore, P.B.' 3 ? # _cell.entry_id 1S03 _cell.length_a 61.22 _cell.length_b 61.22 _cell.length_c 332.52 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S03 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 47-MER 15116.042 2 ? ? ? ? 2 polymer nat '30S ribosomal protein S8' 14015.361 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 17 ? ? ? ? 4 water nat water 18.015 5 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGACGAUGGCGAAACUGCAUGAGGCAAUUCAUGCAAGUCCCUCGUCC GGACGAUGGCGAAACUGCAUGAGGCAAUUCAUGCAAGUCCCUCGUCC A,B ? 2 'polypeptide(L)' no no ;SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRP GLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA ; ;SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRP GLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA ; H,G ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 G n 1 6 A n 1 7 U n 1 8 G n 1 9 G n 1 10 C n 1 11 G n 1 12 A n 1 13 A n 1 14 A n 1 15 C n 1 16 U n 1 17 G n 1 18 C n 1 19 A n 1 20 U n 1 21 G n 1 22 A n 1 23 G n 1 24 G n 1 25 C n 1 26 A n 1 27 A n 1 28 U n 1 29 U n 1 30 C n 1 31 A n 1 32 U n 1 33 G n 1 34 C n 1 35 A n 1 36 A n 1 37 G n 1 38 U n 1 39 C n 1 40 C n 1 41 C n 1 42 U n 1 43 C n 1 44 G n 1 45 U n 1 46 C n 1 47 C n 2 1 SER n 2 2 MET n 2 3 GLN n 2 4 ASP n 2 5 PRO n 2 6 ILE n 2 7 ALA n 2 8 ASP n 2 9 MET n 2 10 LEU n 2 11 THR n 2 12 ARG n 2 13 ILE n 2 14 ARG n 2 15 ASN n 2 16 GLY n 2 17 GLN n 2 18 ALA n 2 19 ALA n 2 20 ASN n 2 21 LYS n 2 22 ALA n 2 23 ALA n 2 24 VAL n 2 25 THR n 2 26 MET n 2 27 PRO n 2 28 SER n 2 29 SER n 2 30 LYS n 2 31 LEU n 2 32 LYS n 2 33 VAL n 2 34 ALA n 2 35 ILE n 2 36 ALA n 2 37 ASN n 2 38 VAL n 2 39 LEU n 2 40 LYS n 2 41 GLU n 2 42 GLU n 2 43 GLY n 2 44 PHE n 2 45 ILE n 2 46 GLU n 2 47 ASP n 2 48 PHE n 2 49 LYS n 2 50 VAL n 2 51 GLU n 2 52 GLY n 2 53 ASP n 2 54 THR n 2 55 LYS n 2 56 PRO n 2 57 GLU n 2 58 LEU n 2 59 GLU n 2 60 LEU n 2 61 THR n 2 62 LEU n 2 63 LYS n 2 64 TYR n 2 65 PHE n 2 66 GLN n 2 67 GLY n 2 68 LYS n 2 69 ALA n 2 70 VAL n 2 71 VAL n 2 72 GLU n 2 73 SER n 2 74 ILE n 2 75 GLN n 2 76 ARG n 2 77 VAL n 2 78 SER n 2 79 ARG n 2 80 PRO n 2 81 GLY n 2 82 LEU n 2 83 ARG n 2 84 ILE n 2 85 TYR n 2 86 LYS n 2 87 ARG n 2 88 LYS n 2 89 ASP n 2 90 GLU n 2 91 LEU n 2 92 PRO n 2 93 LYS n 2 94 VAL n 2 95 MET n 2 96 ALA n 2 97 GLY n 2 98 LEU n 2 99 GLY n 2 100 ILE n 2 101 ALA n 2 102 VAL n 2 103 VAL n 2 104 SER n 2 105 THR n 2 106 SER n 2 107 LYS n 2 108 GLY n 2 109 VAL n 2 110 MET n 2 111 THR n 2 112 ASP n 2 113 ARG n 2 114 ALA n 2 115 ALA n 2 116 ARG n 2 117 GLN n 2 118 ALA n 2 119 GLY n 2 120 LEU n 2 121 GLY n 2 122 GLY n 2 123 GLU n 2 124 ILE n 2 125 ILE n 2 126 CYS n 2 127 TYR n 2 128 VAL n 2 129 ALA n # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus Escherichia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'RNA was prepared by in vitro transciption, sequence from E. coli spc operon' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RS8_ECOLI P0A7W7 2 ;SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRP GLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA ; 1 ? 2 PDB 1S03 1S03 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1S03 H 1 ? 129 ? P0A7W7 1 ? 129 ? 1 129 2 1 1S03 G 1 ? 129 ? P0A7W7 1 ? 129 ? 1 129 3 2 1S03 A 1 ? 47 ? 1S03 1 ? 47 ? 1 47 4 2 1S03 B 1 ? 47 ? 1S03 1 ? 47 ? 1 47 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1S03 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 61.93 _exptl_crystal.description ? _exptl_crystal.density_Matthews 3.26 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pdbx_details 'PEG 8000, zinc acetate, sodium acetate buffer, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 296K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 'zinc acetate' ? ? ? 1 3 1 'sodium acetate buffer' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 800' ? ? ? 1 6 2 'zinc acetate' ? ? ? 1 7 2 'sodium acetate buffer' ? ? ? 1 8 2 H2O ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 ? ? 1 2 ? ? 1 3 ? ? 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0049 1.0 2 0.9928 1.0 3 1.008998 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'NSLS BEAMLINE X25' NSLS X25 ? 1.0049 2 SYNCHROTRON 'NSLS BEAMLINE X25' NSLS X25 ? 0.9928 3 SYNCHROTRON 'NSLS BEAMLINE X25' NSLS X25 ? 1.008998 # _reflns.entry_id 1S03 _reflns.number_all ? _reflns.number_obs 20950 _reflns.percent_possible_obs ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 50.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3907 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1S03 _refine.ls_number_reflns_obs 19880 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.70 _refine.ls_percent_reflns_obs 99.80 _refine.ls_R_factor_obs 0.23734 _refine.ls_R_factor_all 0.23917 _refine.ls_R_factor_R_work 0.23734 _refine.ls_R_factor_R_free 0.27313 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1070 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.924 _refine.correlation_coeff_Fo_to_Fc_free 0.899 _refine.B_iso_mean 44.626 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.02 _refine.aniso_B[1][2] 0.01 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 1J5E' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.642 _refine.pdbx_overall_ESU_R_Free 0.335 _refine.overall_SU_ML 0.285 _refine.overall_SU_B 14.192 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1921 _refine_hist.pdbx_number_atoms_nucleic_acid 2008 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 3951 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 4185 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.331 2.570 ? 6102 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.905 5.000 ? 251 'X-RAY DIFFRACTION' ? r_chiral_restr 0.103 0.200 ? 681 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 2374 'X-RAY DIFFRACTION' ? r_nbd_refined 0.234 0.200 ? 1638 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.200 ? 128 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.316 0.200 ? 55 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.288 0.200 ? 7 'X-RAY DIFFRACTION' ? r_mcbond_it 2.187 3.500 ? 1253 'X-RAY DIFFRACTION' ? r_mcangle_it 3.773 4.000 ? 2010 'X-RAY DIFFRACTION' ? r_scbond_it 3.798 5.000 ? 2932 'X-RAY DIFFRACTION' ? r_scangle_it 5.825 8.000 ? 4092 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'tight positional' G 903 0.06 0.05 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 'tight positional' A 449 0.10 0.05 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? 1 'tight thermal' G 903 0.19 0.50 1 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? 1 'tight thermal' A 449 0.25 0.50 2 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.700 _refine_ls_shell.d_res_low 2.846 _refine_ls_shell.number_reflns_R_work 2819 _refine_ls_shell.R_factor_R_work 0.421 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.451 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 155 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 G 1 2 H 1 3 G 1 4 H 2 1 A 2 2 B 2 3 A 2 4 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 D ASP 4 . D VAL 50 . G ASP 4 G VAL 50 1 ? 1 2 1 C ASP 4 . C VAL 50 . H ASP 4 H VAL 50 1 ? 1 3 2 D LEU 58 . D ALA 129 . G LEU 58 G ALA 129 1 ? 1 4 2 C LEU 58 . C ALA 129 . H LEU 58 H ALA 129 1 ? 2 1 1 A G 11 . A G 21 . A G 11 A G 21 1 ? 2 2 1 B G 11 . B G 21 . B G 11 B G 21 1 ? 2 3 2 A C 30 . A C 39 . A C 30 A C 39 1 ? 2 4 2 B C 30 . B C 39 . B C 30 B C 39 1 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details _struct_ncs_ens.point_group 1 ? ? 2 ? ? # _struct.entry_id 1S03 _struct.title 'The Structure of a Ribosomal Protein S8/spc Operon mRNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1S03 _struct_keywords.pdbx_keywords TRANSCRIPTION/RNA _struct_keywords.text 'protein-RNA complex, ribosomal, spc operon, TRANSCRIPTION-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 4 ? W N N 4 ? X N N 4 ? Y N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP C 4 ? ALA C 19 ? ASP H 4 ALA H 19 1 ? 16 HELX_P HELX_P2 2 SER C 29 ? GLU C 42 ? SER H 29 GLU H 42 1 ? 14 HELX_P HELX_P3 3 ARG C 87 ? LEU C 91 ? ARG H 87 LEU H 91 5 ? 5 HELX_P HELX_P4 4 ASP C 112 ? GLY C 119 ? ASP H 112 GLY H 119 1 ? 8 HELX_P HELX_P5 5 ASP D 4 ? ALA D 19 ? ASP G 4 ALA G 19 1 ? 16 HELX_P HELX_P6 6 SER D 29 ? GLU D 42 ? SER G 29 GLU G 42 1 ? 14 HELX_P HELX_P7 7 ARG D 87 ? LEU D 91 ? ARG G 87 LEU G 91 5 ? 5 HELX_P HELX_P8 8 ASP D 112 ? GLY D 119 ? ASP G 112 GLY G 119 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 1 OP1 ? ? ? 1_555 K ZN . ZN ? ? A G 1 A ZN 54 1_555 ? ? ? ? ? ? ? 2.505 ? ? metalc2 metalc ? ? A G 1 N7 ? ? ? 1_555 L ZN . ZN ? ? A G 1 A ZN 55 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc3 metalc ? ? A G 2 O6 ? ? ? 1_555 J ZN . ZN ? ? A G 2 A ZN 53 1_555 ? ? ? ? ? ? ? 2.767 ? ? metalc4 metalc ? ? A G 2 N7 ? ? ? 1_555 J ZN . ZN ? ? A G 2 A ZN 53 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc5 metalc ? ? A G 8 N7 ? ? ? 1_555 I ZN . ZN ? ? A G 8 A ZN 52 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc6 metalc ? ? B G 1 N7 ? ? ? 1_555 O ZN . ZN ? ? B G 1 B ZN 50 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc7 metalc ? ? B G 2 N7 ? ? ? 1_555 R ZN . ZN ? ? B G 2 B ZN 53 1_555 ? ? ? ? ? ? ? 2.611 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 1 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 1 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 1 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 46 N3 ? ? A G 2 A C 46 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog5 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 45 N3 ? ? A A 3 A U 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 45 O4 ? ? A A 3 A U 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 44 N1 ? ? A C 4 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 44 O6 ? ? A C 4 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 44 N2 ? ? A C 4 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 43 N3 ? ? A G 5 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 43 O2 ? ? A G 5 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 43 N4 ? ? A G 5 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 42 N3 ? ? A A 6 A U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 42 O4 ? ? A A 6 A U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 8 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 8 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 8 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 40 N3 ? ? A G 9 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 40 O2 ? ? A G 9 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 40 N4 ? ? A G 9 A C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 39 N3 ? ? A G 11 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 39 O2 ? ? A G 11 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 39 N4 ? ? A G 11 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A A 12 N1 ? ? ? 1_555 A U 38 N3 ? ? A A 12 A U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 12 N6 ? ? ? 1_555 A U 38 O4 ? ? A A 12 A U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 13 N3 ? ? ? 1_555 A A 14 N6 ? ? A A 13 A A 14 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog27 hydrog ? ? A A 14 N6 ? ? ? 1_555 A U 38 O2 ? ? A A 14 A U 38 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog28 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 37 N1 ? ? A C 15 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 37 O6 ? ? A C 15 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 37 N2 ? ? A C 15 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 36 N1 ? ? A U 16 A A 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 36 N6 ? ? A U 16 A A 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 17 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 17 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 17 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 33 N1 ? ? A C 18 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 33 O6 ? ? A C 18 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 33 N2 ? ? A C 18 A G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 19 N1 ? ? ? 1_555 A U 32 N3 ? ? A A 19 A U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A A 19 N6 ? ? ? 1_555 A U 32 O4 ? ? A A 19 A U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 31 N1 ? ? A U 20 A A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A U 20 O4 ? ? ? 1_555 A A 31 N6 ? ? A U 20 A A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 21 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 21 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 21 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A A 22 N1 ? ? ? 1_555 A U 29 N3 ? ? A A 22 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A A 22 N6 ? ? ? 1_555 A U 29 O4 ? ? A A 22 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A A 35 N3 ? ? ? 1_555 A A 36 N6 ? ? A A 35 A A 36 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog49 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 47 N3 ? ? B G 1 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 47 O2 ? ? B G 1 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 47 N4 ? ? B G 1 B C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 46 N3 ? ? B G 2 B C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 46 O2 ? ? B G 2 B C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 46 N4 ? ? B G 2 B C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 45 N3 ? ? B A 3 B U 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 45 O4 ? ? B A 3 B U 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 44 N1 ? ? B C 4 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 44 O6 ? ? B C 4 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 44 N2 ? ? B C 4 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 43 N3 ? ? B G 5 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 43 O2 ? ? B G 5 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B G 5 O6 ? ? ? 1_555 B C 43 N4 ? ? B G 5 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B A 6 N1 ? ? ? 1_555 B U 42 N3 ? ? B A 6 B U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B A 6 N6 ? ? ? 1_555 B U 42 O4 ? ? B A 6 B U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 41 N3 ? ? B G 8 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 41 O2 ? ? B G 8 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 41 N4 ? ? B G 8 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 40 N3 ? ? B G 9 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 40 O2 ? ? B G 9 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 40 N4 ? ? B G 9 B C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 39 N3 ? ? B G 11 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 39 O2 ? ? B G 11 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 39 N4 ? ? B G 11 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B A 12 N1 ? ? ? 1_555 B U 38 N3 ? ? B A 12 B U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B A 12 N6 ? ? ? 1_555 B U 38 O4 ? ? B A 12 B U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B A 13 N3 ? ? ? 1_555 B A 14 N6 ? ? B A 13 B A 14 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog77 hydrog ? ? B A 14 N6 ? ? ? 1_555 B U 38 O2 ? ? B A 14 B U 38 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog78 hydrog ? ? B C 15 N3 ? ? ? 1_555 B G 37 N1 ? ? B C 15 B G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B C 15 N4 ? ? ? 1_555 B G 37 O6 ? ? B C 15 B G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B C 15 O2 ? ? ? 1_555 B G 37 N2 ? ? B C 15 B G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B U 16 N3 ? ? ? 1_555 B A 36 N1 ? ? B U 16 B A 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B U 16 O4 ? ? ? 1_555 B A 36 N6 ? ? B U 16 B A 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 34 N3 ? ? B G 17 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 34 O2 ? ? B G 17 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 34 N4 ? ? B G 17 B C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 33 N1 ? ? B C 18 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 33 O6 ? ? B C 18 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 33 N2 ? ? B C 18 B G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B A 19 N1 ? ? ? 1_555 B U 32 N3 ? ? B A 19 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B A 19 N6 ? ? ? 1_555 B U 32 O4 ? ? B A 19 B U 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B U 20 N3 ? ? ? 1_555 B A 31 N1 ? ? B U 20 B A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B U 20 O4 ? ? ? 1_555 B A 31 N6 ? ? B U 20 B A 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 21 N1 ? ? ? 1_555 B C 30 N3 ? ? B G 21 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 21 N2 ? ? ? 1_555 B C 30 O2 ? ? B G 21 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 21 O6 ? ? ? 1_555 B C 30 N4 ? ? B G 21 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B A 22 N1 ? ? ? 1_555 B U 29 N3 ? ? B A 22 B U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B A 22 N6 ? ? ? 1_555 B U 29 O4 ? ? B A 22 B U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B A 35 N3 ? ? ? 1_555 B A 36 N6 ? ? B A 35 B A 36 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 4 ? D ? 3 ? E ? 3 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA C 23 ? PRO C 27 ? ALA H 23 PRO H 27 A 2 GLU C 57 ? LEU C 62 ? GLU H 57 LEU H 62 A 3 ILE C 45 ? GLU C 51 ? ILE H 45 GLU H 51 B 1 ILE C 74 ? ARG C 76 ? ILE H 74 ARG H 76 B 2 GLY C 122 ? VAL C 128 ? GLY H 122 VAL H 128 B 3 TYR C 85 ? LYS C 86 ? TYR H 85 LYS H 86 C 1 ILE C 74 ? ARG C 76 ? ILE H 74 ARG H 76 C 2 GLY C 122 ? VAL C 128 ? GLY H 122 VAL H 128 C 3 ILE C 100 ? THR C 105 ? ILE H 100 THR H 105 C 4 GLY C 108 ? THR C 111 ? GLY H 108 THR H 111 D 1 ALA D 23 ? PRO D 27 ? ALA G 23 PRO G 27 D 2 GLU D 57 ? LEU D 62 ? GLU G 57 LEU G 62 D 3 ILE D 45 ? VAL D 50 ? ILE G 45 VAL G 50 E 1 ILE D 74 ? ARG D 76 ? ILE G 74 ARG G 76 E 2 GLY D 122 ? VAL D 128 ? GLY G 122 VAL G 128 E 3 TYR D 85 ? LYS D 86 ? TYR G 85 LYS G 86 F 1 ILE D 74 ? ARG D 76 ? ILE G 74 ARG G 76 F 2 GLY D 122 ? VAL D 128 ? GLY G 122 VAL G 128 F 3 ILE D 100 ? THR D 105 ? ILE G 100 THR G 105 F 4 GLY D 108 ? THR D 111 ? GLY G 108 THR G 111 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET C 26 ? N MET H 26 O LEU C 58 ? O LEU H 58 A 2 3 O GLU C 59 ? O GLU H 59 N LYS C 49 ? N LYS H 49 B 1 2 N GLN C 75 ? N GLN H 75 O TYR C 127 ? O TYR H 127 B 2 3 O GLY C 122 ? O GLY H 122 N LYS C 86 ? N LYS H 86 C 1 2 N GLN C 75 ? N GLN H 75 O TYR C 127 ? O TYR H 127 C 2 3 O GLU C 123 ? O GLU H 123 N SER C 104 ? N SER H 104 C 3 4 N VAL C 103 ? N VAL H 103 O MET C 110 ? O MET H 110 D 1 2 N MET D 26 ? N MET G 26 O LEU D 58 ? O LEU G 58 D 2 3 O THR D 61 ? O THR G 61 N ASP D 47 ? N ASP G 47 E 1 2 N GLN D 75 ? N GLN G 75 O TYR D 127 ? O TYR G 127 E 2 3 O GLY D 122 ? O GLY G 122 N LYS D 86 ? N LYS G 86 F 1 2 N GLN D 75 ? N GLN G 75 O TYR D 127 ? O TYR G 127 F 2 3 O GLU D 123 ? O GLU G 123 N SER D 104 ? N SER G 104 F 3 4 N THR D 105 ? N THR G 105 O GLY D 108 ? O GLY G 108 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 50 ? 1 'BINDING SITE FOR RESIDUE ZN B 50' AC2 Software A ZN 52 ? 1 'BINDING SITE FOR RESIDUE ZN A 52' AC3 Software A ZN 53 ? 1 'BINDING SITE FOR RESIDUE ZN A 53' AC4 Software G ZN 131 ? 1 'BINDING SITE FOR RESIDUE ZN G 131' AC5 Software A ZN 54 ? 1 'BINDING SITE FOR RESIDUE ZN A 54' AC6 Software A ZN 55 ? 1 'BINDING SITE FOR RESIDUE ZN A 55' AC7 Software B ZN 53 ? 1 'BINDING SITE FOR RESIDUE ZN B 53' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 G B 1 ? G B 1 . ? 1_555 ? 2 AC2 1 G A 8 ? G A 8 . ? 1_555 ? 3 AC3 1 G A 2 ? G A 2 . ? 1_555 ? 4 AC4 1 GLU D 41 ? GLU G 41 . ? 1_555 ? 5 AC5 1 G A 1 ? G A 1 . ? 1_555 ? 6 AC6 1 G A 1 ? G A 1 . ? 1_555 ? 7 AC7 1 G B 2 ? G B 2 . ? 1_555 ? # _database_PDB_matrix.entry_id 1S03 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1S03 _atom_sites.fract_transf_matrix[1][1] 0.016336 _atom_sites.fract_transf_matrix[1][2] 0.009432 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018863 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003007 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 A 6 6 6 A A A . n A 1 7 U 7 7 7 U U A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 C 10 10 10 C C A . n A 1 11 G 11 11 11 G G A . n A 1 12 A 12 12 12 A A A . n A 1 13 A 13 13 13 A A A . n A 1 14 A 14 14 14 A A A . n A 1 15 C 15 15 15 C C A . n A 1 16 U 16 16 16 U U A . n A 1 17 G 17 17 17 G G A . n A 1 18 C 18 18 18 C C A . n A 1 19 A 19 19 19 A A A . n A 1 20 U 20 20 20 U U A . n A 1 21 G 21 21 21 G G A . n A 1 22 A 22 22 22 A A A . n A 1 23 G 23 23 23 G G A . n A 1 24 G 24 24 24 G G A . n A 1 25 C 25 25 25 C C A . n A 1 26 A 26 26 26 A A A . n A 1 27 A 27 27 27 A A A . n A 1 28 U 28 28 28 U U A . n A 1 29 U 29 29 29 U U A . n A 1 30 C 30 30 30 C C A . n A 1 31 A 31 31 31 A A A . n A 1 32 U 32 32 32 U U A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 A 35 35 35 A A A . n A 1 36 A 36 36 36 A A A . n A 1 37 G 37 37 37 G G A . n A 1 38 U 38 38 38 U U A . n A 1 39 C 39 39 39 C C A . n A 1 40 C 40 40 40 C C A . n A 1 41 C 41 41 41 C C A . n A 1 42 U 42 42 42 U U A . n A 1 43 C 43 43 43 C C A . n A 1 44 G 44 44 44 G G A . n A 1 45 U 45 45 45 U U A . n A 1 46 C 46 46 46 C C A . n A 1 47 C 47 47 47 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 A 3 3 3 A A B . n B 1 4 C 4 4 4 C C B . n B 1 5 G 5 5 5 G G B . n B 1 6 A 6 6 6 A A B . n B 1 7 U 7 7 7 U U B . n B 1 8 G 8 8 8 G G B . n B 1 9 G 9 9 9 G G B . n B 1 10 C 10 10 10 C C B . n B 1 11 G 11 11 11 G G B . n B 1 12 A 12 12 12 A A B . n B 1 13 A 13 13 13 A A B . n B 1 14 A 14 14 14 A A B . n B 1 15 C 15 15 15 C C B . n B 1 16 U 16 16 16 U U B . n B 1 17 G 17 17 17 G G B . n B 1 18 C 18 18 18 C C B . n B 1 19 A 19 19 19 A A B . n B 1 20 U 20 20 20 U U B . n B 1 21 G 21 21 21 G G B . n B 1 22 A 22 22 22 A A B . n B 1 23 G 23 23 23 G G B . n B 1 24 G 24 24 24 G G B . n B 1 25 C 25 25 25 C C B . n B 1 26 A 26 26 26 A A B . n B 1 27 A 27 27 27 A A B . n B 1 28 U 28 28 28 U U B . n B 1 29 U 29 29 29 U U B . n B 1 30 C 30 30 30 C C B . n B 1 31 A 31 31 31 A A B . n B 1 32 U 32 32 32 U U B . n B 1 33 G 33 33 33 G G B . n B 1 34 C 34 34 34 C C B . n B 1 35 A 35 35 35 A A B . n B 1 36 A 36 36 36 A A B . n B 1 37 G 37 37 37 G G B . n B 1 38 U 38 38 38 U U B . n B 1 39 C 39 39 39 C C B . n B 1 40 C 40 40 40 C C B . n B 1 41 C 41 41 41 C C B . n B 1 42 U 42 42 42 U U B . n B 1 43 C 43 43 43 C C B . n B 1 44 G 44 44 44 G G B . n B 1 45 U 45 45 45 U U B . n B 1 46 C 46 46 46 C C B . n B 1 47 C 47 47 47 C C B . n C 2 1 SER 1 1 ? ? ? H . n C 2 2 MET 2 2 ? ? ? H . n C 2 3 GLN 3 3 3 GLN GLN H . n C 2 4 ASP 4 4 4 ASP ASP H . n C 2 5 PRO 5 5 5 PRO PRO H . n C 2 6 ILE 6 6 6 ILE ILE H . n C 2 7 ALA 7 7 7 ALA ALA H . n C 2 8 ASP 8 8 8 ASP ASP H . n C 2 9 MET 9 9 9 MET MET H . n C 2 10 LEU 10 10 10 LEU LEU H . n C 2 11 THR 11 11 11 THR THR H . n C 2 12 ARG 12 12 12 ARG ARG H . n C 2 13 ILE 13 13 13 ILE ILE H . n C 2 14 ARG 14 14 14 ARG ARG H . n C 2 15 ASN 15 15 15 ASN ASN H . n C 2 16 GLY 16 16 16 GLY GLY H . n C 2 17 GLN 17 17 17 GLN GLN H . n C 2 18 ALA 18 18 18 ALA ALA H . n C 2 19 ALA 19 19 19 ALA ALA H . n C 2 20 ASN 20 20 20 ASN ASN H . n C 2 21 LYS 21 21 21 LYS LYS H . n C 2 22 ALA 22 22 22 ALA ALA H . n C 2 23 ALA 23 23 23 ALA ALA H . n C 2 24 VAL 24 24 24 VAL VAL H . n C 2 25 THR 25 25 25 THR THR H . n C 2 26 MET 26 26 26 MET MET H . n C 2 27 PRO 27 27 27 PRO PRO H . n C 2 28 SER 28 28 28 SER SER H . n C 2 29 SER 29 29 29 SER SER H . n C 2 30 LYS 30 30 30 LYS LYS H . n C 2 31 LEU 31 31 31 LEU LEU H . n C 2 32 LYS 32 32 32 LYS LYS H . n C 2 33 VAL 33 33 33 VAL VAL H . n C 2 34 ALA 34 34 34 ALA ALA H . n C 2 35 ILE 35 35 35 ILE ILE H . n C 2 36 ALA 36 36 36 ALA ALA H . n C 2 37 ASN 37 37 37 ASN ASN H . n C 2 38 VAL 38 38 38 VAL VAL H . n C 2 39 LEU 39 39 39 LEU LEU H . n C 2 40 LYS 40 40 40 LYS LYS H . n C 2 41 GLU 41 41 41 GLU GLU H . n C 2 42 GLU 42 42 42 GLU GLU H . n C 2 43 GLY 43 43 43 GLY GLY H . n C 2 44 PHE 44 44 44 PHE PHE H . n C 2 45 ILE 45 45 45 ILE ILE H . n C 2 46 GLU 46 46 46 GLU GLU H . n C 2 47 ASP 47 47 47 ASP ASP H . n C 2 48 PHE 48 48 48 PHE PHE H . n C 2 49 LYS 49 49 49 LYS LYS H . n C 2 50 VAL 50 50 50 VAL VAL H . n C 2 51 GLU 51 51 51 GLU GLU H . n C 2 52 GLY 52 52 52 GLY GLY H . n C 2 53 ASP 53 53 53 ASP ASP H . n C 2 54 THR 54 54 54 THR THR H . n C 2 55 LYS 55 55 55 LYS LYS H . n C 2 56 PRO 56 56 56 PRO PRO H . n C 2 57 GLU 57 57 57 GLU GLU H . n C 2 58 LEU 58 58 58 LEU LEU H . n C 2 59 GLU 59 59 59 GLU GLU H . n C 2 60 LEU 60 60 60 LEU LEU H . n C 2 61 THR 61 61 61 THR THR H . n C 2 62 LEU 62 62 62 LEU LEU H . n C 2 63 LYS 63 63 63 LYS LYS H . n C 2 64 TYR 64 64 64 TYR TYR H . n C 2 65 PHE 65 65 65 PHE PHE H . n C 2 66 GLN 66 66 66 GLN GLN H . n C 2 67 GLY 67 67 67 GLY GLY H . n C 2 68 LYS 68 68 68 LYS LYS H . n C 2 69 ALA 69 69 69 ALA ALA H . n C 2 70 VAL 70 70 70 VAL VAL H . n C 2 71 VAL 71 71 71 VAL VAL H . n C 2 72 GLU 72 72 72 GLU GLU H . n C 2 73 SER 73 73 73 SER SER H . n C 2 74 ILE 74 74 74 ILE ILE H . n C 2 75 GLN 75 75 75 GLN GLN H . n C 2 76 ARG 76 76 76 ARG ARG H . n C 2 77 VAL 77 77 77 VAL VAL H . n C 2 78 SER 78 78 78 SER SER H . n C 2 79 ARG 79 79 79 ARG ARG H . n C 2 80 PRO 80 80 80 PRO PRO H . n C 2 81 GLY 81 81 81 GLY GLY H . n C 2 82 LEU 82 82 82 LEU LEU H . n C 2 83 ARG 83 83 83 ARG ARG H . n C 2 84 ILE 84 84 84 ILE ILE H . n C 2 85 TYR 85 85 85 TYR TYR H . n C 2 86 LYS 86 86 86 LYS LYS H . n C 2 87 ARG 87 87 87 ARG ARG H . n C 2 88 LYS 88 88 88 LYS LYS H . n C 2 89 ASP 89 89 89 ASP ASP H . n C 2 90 GLU 90 90 90 GLU GLU H . n C 2 91 LEU 91 91 91 LEU LEU H . n C 2 92 PRO 92 92 92 PRO PRO H . n C 2 93 LYS 93 93 93 LYS LYS H . n C 2 94 VAL 94 94 94 VAL VAL H . n C 2 95 MET 95 95 95 MET MET H . n C 2 96 ALA 96 96 96 ALA ALA H . n C 2 97 GLY 97 97 97 GLY GLY H . n C 2 98 LEU 98 98 98 LEU LEU H . n C 2 99 GLY 99 99 99 GLY GLY H . n C 2 100 ILE 100 100 100 ILE ILE H . n C 2 101 ALA 101 101 101 ALA ALA H . n C 2 102 VAL 102 102 102 VAL VAL H . n C 2 103 VAL 103 103 103 VAL VAL H . n C 2 104 SER 104 104 104 SER SER H . n C 2 105 THR 105 105 105 THR THR H . n C 2 106 SER 106 106 106 SER SER H . n C 2 107 LYS 107 107 107 LYS LYS H . n C 2 108 GLY 108 108 108 GLY GLY H . n C 2 109 VAL 109 109 109 VAL VAL H . n C 2 110 MET 110 110 110 MET MET H . n C 2 111 THR 111 111 111 THR THR H . n C 2 112 ASP 112 112 112 ASP ASP H . n C 2 113 ARG 113 113 113 ARG ARG H . n C 2 114 ALA 114 114 114 ALA ALA H . n C 2 115 ALA 115 115 115 ALA ALA H . n C 2 116 ARG 116 116 116 ARG ARG H . n C 2 117 GLN 117 117 117 GLN GLN H . n C 2 118 ALA 118 118 118 ALA ALA H . n C 2 119 GLY 119 119 119 GLY GLY H . n C 2 120 LEU 120 120 120 LEU LEU H . n C 2 121 GLY 121 121 121 GLY GLY H . n C 2 122 GLY 122 122 122 GLY GLY H . n C 2 123 GLU 123 123 123 GLU GLU H . n C 2 124 ILE 124 124 124 ILE ILE H . n C 2 125 ILE 125 125 125 ILE ILE H . n C 2 126 CYS 126 126 126 CYS CYS H . n C 2 127 TYR 127 127 127 TYR TYR H . n C 2 128 VAL 128 128 128 VAL VAL H . n C 2 129 ALA 129 129 129 ALA ALA H . n D 2 1 SER 1 1 ? ? ? G . n D 2 2 MET 2 2 ? ? ? G . n D 2 3 GLN 3 3 ? ? ? G . n D 2 4 ASP 4 4 4 ASP ASP G . n D 2 5 PRO 5 5 5 PRO PRO G . n D 2 6 ILE 6 6 6 ILE ILE G . n D 2 7 ALA 7 7 7 ALA ALA G . n D 2 8 ASP 8 8 8 ASP ASP G . n D 2 9 MET 9 9 9 MET MET G . n D 2 10 LEU 10 10 10 LEU LEU G . n D 2 11 THR 11 11 11 THR THR G . n D 2 12 ARG 12 12 12 ARG ARG G . n D 2 13 ILE 13 13 13 ILE ILE G . n D 2 14 ARG 14 14 14 ARG ARG G . n D 2 15 ASN 15 15 15 ASN ASN G . n D 2 16 GLY 16 16 16 GLY GLY G . n D 2 17 GLN 17 17 17 GLN GLN G . n D 2 18 ALA 18 18 18 ALA ALA G . n D 2 19 ALA 19 19 19 ALA ALA G . n D 2 20 ASN 20 20 20 ASN ASN G . n D 2 21 LYS 21 21 21 LYS LYS G . n D 2 22 ALA 22 22 22 ALA ALA G . n D 2 23 ALA 23 23 23 ALA ALA G . n D 2 24 VAL 24 24 24 VAL VAL G . n D 2 25 THR 25 25 25 THR THR G . n D 2 26 MET 26 26 26 MET MET G . n D 2 27 PRO 27 27 27 PRO PRO G . n D 2 28 SER 28 28 28 SER SER G . n D 2 29 SER 29 29 29 SER SER G . n D 2 30 LYS 30 30 30 LYS LYS G . n D 2 31 LEU 31 31 31 LEU LEU G . n D 2 32 LYS 32 32 32 LYS LYS G . n D 2 33 VAL 33 33 33 VAL VAL G . n D 2 34 ALA 34 34 34 ALA ALA G . n D 2 35 ILE 35 35 35 ILE ILE G . n D 2 36 ALA 36 36 36 ALA ALA G . n D 2 37 ASN 37 37 37 ASN ASN G . n D 2 38 VAL 38 38 38 VAL VAL G . n D 2 39 LEU 39 39 39 LEU LEU G . n D 2 40 LYS 40 40 40 LYS LYS G . n D 2 41 GLU 41 41 41 GLU GLU G . n D 2 42 GLU 42 42 42 GLU GLU G . n D 2 43 GLY 43 43 43 GLY GLY G . n D 2 44 PHE 44 44 44 PHE PHE G . n D 2 45 ILE 45 45 45 ILE ILE G . n D 2 46 GLU 46 46 46 GLU GLU G . n D 2 47 ASP 47 47 47 ASP ASP G . n D 2 48 PHE 48 48 48 PHE PHE G . n D 2 49 LYS 49 49 49 LYS LYS G . n D 2 50 VAL 50 50 50 VAL VAL G . n D 2 51 GLU 51 51 51 GLU GLU G . n D 2 52 GLY 52 52 52 GLY GLY G . n D 2 53 ASP 53 53 53 ASP ASP G . n D 2 54 THR 54 54 54 THR THR G . n D 2 55 LYS 55 55 55 LYS LYS G . n D 2 56 PRO 56 56 56 PRO PRO G . n D 2 57 GLU 57 57 57 GLU GLU G . n D 2 58 LEU 58 58 58 LEU LEU G . n D 2 59 GLU 59 59 59 GLU GLU G . n D 2 60 LEU 60 60 60 LEU LEU G . n D 2 61 THR 61 61 61 THR THR G . n D 2 62 LEU 62 62 62 LEU LEU G . n D 2 63 LYS 63 63 63 LYS LYS G . n D 2 64 TYR 64 64 64 TYR TYR G . n D 2 65 PHE 65 65 65 PHE PHE G . n D 2 66 GLN 66 66 66 GLN GLN G . n D 2 67 GLY 67 67 67 GLY GLY G . n D 2 68 LYS 68 68 68 LYS LYS G . n D 2 69 ALA 69 69 69 ALA ALA G . n D 2 70 VAL 70 70 70 VAL VAL G . n D 2 71 VAL 71 71 71 VAL VAL G . n D 2 72 GLU 72 72 72 GLU GLU G . n D 2 73 SER 73 73 73 SER SER G . n D 2 74 ILE 74 74 74 ILE ILE G . n D 2 75 GLN 75 75 75 GLN GLN G . n D 2 76 ARG 76 76 76 ARG ARG G . n D 2 77 VAL 77 77 77 VAL VAL G . n D 2 78 SER 78 78 78 SER SER G . n D 2 79 ARG 79 79 79 ARG ARG G . n D 2 80 PRO 80 80 80 PRO PRO G . n D 2 81 GLY 81 81 81 GLY GLY G . n D 2 82 LEU 82 82 82 LEU LEU G . n D 2 83 ARG 83 83 83 ARG ARG G . n D 2 84 ILE 84 84 84 ILE ILE G . n D 2 85 TYR 85 85 85 TYR TYR G . n D 2 86 LYS 86 86 86 LYS LYS G . n D 2 87 ARG 87 87 87 ARG ARG G . n D 2 88 LYS 88 88 88 LYS LYS G . n D 2 89 ASP 89 89 89 ASP ASP G . n D 2 90 GLU 90 90 90 GLU GLU G . n D 2 91 LEU 91 91 91 LEU LEU G . n D 2 92 PRO 92 92 92 PRO PRO G . n D 2 93 LYS 93 93 93 LYS LYS G . n D 2 94 VAL 94 94 94 VAL VAL G . n D 2 95 MET 95 95 95 MET MET G . n D 2 96 ALA 96 96 96 ALA ALA G . n D 2 97 GLY 97 97 97 GLY GLY G . n D 2 98 LEU 98 98 98 LEU LEU G . n D 2 99 GLY 99 99 99 GLY GLY G . n D 2 100 ILE 100 100 100 ILE ILE G . n D 2 101 ALA 101 101 101 ALA ALA G . n D 2 102 VAL 102 102 102 VAL VAL G . n D 2 103 VAL 103 103 103 VAL VAL G . n D 2 104 SER 104 104 104 SER SER G . n D 2 105 THR 105 105 105 THR THR G . n D 2 106 SER 106 106 106 SER SER G . n D 2 107 LYS 107 107 107 LYS LYS G . n D 2 108 GLY 108 108 108 GLY GLY G . n D 2 109 VAL 109 109 109 VAL VAL G . n D 2 110 MET 110 110 110 MET MET G . n D 2 111 THR 111 111 111 THR THR G . n D 2 112 ASP 112 112 112 ASP ASP G . n D 2 113 ARG 113 113 113 ARG ARG G . n D 2 114 ALA 114 114 114 ALA ALA G . n D 2 115 ALA 115 115 115 ALA ALA G . n D 2 116 ARG 116 116 116 ARG ARG G . n D 2 117 GLN 117 117 117 GLN GLN G . n D 2 118 ALA 118 118 118 ALA ALA G . n D 2 119 GLY 119 119 119 GLY GLY G . n D 2 120 LEU 120 120 120 LEU LEU G . n D 2 121 GLY 121 121 121 GLY GLY G . n D 2 122 GLY 122 122 122 GLY GLY G . n D 2 123 GLU 123 123 123 GLU GLU G . n D 2 124 ILE 124 124 124 ILE ILE G . n D 2 125 ILE 125 125 125 ILE ILE G . n D 2 126 CYS 126 126 126 CYS CYS G . n D 2 127 TYR 127 127 127 TYR TYR G . n D 2 128 VAL 128 128 128 VAL VAL G . n D 2 129 ALA 129 129 129 ALA ALA G . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN 1 48 1 ZN ZN A . F 3 ZN 1 49 2 ZN ZN A . G 3 ZN 1 50 8 ZN ZN A . H 3 ZN 1 51 9 ZN ZN A . I 3 ZN 1 52 10 ZN ZN A . J 3 ZN 1 53 12 ZN ZN A . K 3 ZN 1 54 15 ZN ZN A . L 3 ZN 1 55 16 ZN ZN A . M 3 ZN 1 48 3 ZN ZN B . N 3 ZN 1 49 4 ZN ZN B . O 3 ZN 1 50 6 ZN ZN B . P 3 ZN 1 51 11 ZN ZN B . Q 3 ZN 1 52 13 ZN ZN B . R 3 ZN 1 53 17 ZN ZN B . S 3 ZN 1 130 5 ZN ZN H . T 3 ZN 1 130 7 ZN ZN G . U 3 ZN 1 131 14 ZN ZN G . V 4 HOH 1 56 4 HOH HOH A . V 4 HOH 2 57 5 HOH HOH A . W 4 HOH 1 54 1 HOH HOH B . X 4 HOH 1 131 3 HOH HOH H . Y 4 HOH 1 132 2 HOH HOH G . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,H,I,J,K,L,S,V,X 2 1 B,D,M,N,O,P,Q,R,T,U,W,Y # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O6 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id G _pdbx_struct_conn_angle.ptnr1_label_seq_id 2 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id G _pdbx_struct_conn_angle.ptnr1_auth_seq_id 2 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id ZN _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id J _pdbx_struct_conn_angle.ptnr2_label_comp_id ZN _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id ZN _pdbx_struct_conn_angle.ptnr2_auth_seq_id 53 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id N7 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id G _pdbx_struct_conn_angle.ptnr3_label_seq_id 2 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id G _pdbx_struct_conn_angle.ptnr3_auth_seq_id 2 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 77.0 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-25 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ncs_dom_lim 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 17 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 37.8577 16.3348 116.5550 0.3062 0.1716 0.7253 0.1695 0.0316 -0.1235 4.7711 9.2682 5.3678 -1.6295 0.2184 2.4129 -0.1844 -0.5780 1.0567 0.1251 0.1660 -1.4775 -0.3135 -0.1948 0.0184 'X-RAY DIFFRACTION' 2 ? refined 25.2635 31.0900 49.9943 0.3256 0.1716 0.3019 0.0428 0.0237 0.0315 5.0988 3.0517 3.4916 -2.3430 3.2293 -0.5338 0.4319 0.4751 -0.0941 -0.2652 -0.4059 0.1682 0.3705 0.5858 -0.0260 'X-RAY DIFFRACTION' 3 ? refined 8.9274 40.2727 63.3524 0.2751 0.0102 0.3031 -0.0503 0.1977 -0.0234 4.9798 3.9057 7.5409 0.2285 -0.8666 0.2445 0.6335 -0.3755 0.6057 0.4184 -0.2330 0.4303 -0.4759 -0.3686 -0.4005 'X-RAY DIFFRACTION' 4 ? refined 37.7240 -3.1373 104.6358 0.4685 0.2794 0.3523 0.1536 0.1392 0.0090 0.9035 2.6727 3.2937 0.0880 0.3335 -1.7635 -0.0998 -0.1184 -0.1073 0.0512 0.1195 -0.2013 0.1852 -0.0790 -0.0198 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 D 4 4 D 129 129 ? G G 'X-RAY DIFFRACTION' ? 2 2 A 1 1 A 47 47 ? A A 'X-RAY DIFFRACTION' ? 3 3 C 4 4 C 129 129 ? H H 'X-RAY DIFFRACTION' ? 4 4 B 1 1 B 47 47 ? B B 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A G 1 ? ? P A G 1 ? ? OP1 A G 1 ? ? 99.20 105.70 -6.50 0.90 N 2 1 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 114.51 108.50 6.01 0.70 N 3 1 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 114.25 108.50 5.75 0.70 N 4 1 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 113.18 108.50 4.68 0.70 N 5 1 "C3'" A A 6 ? ? "O3'" A A 6 ? ? P A U 7 ? ? 127.02 119.70 7.32 1.20 Y 6 1 "C5'" A C 10 ? ? "C4'" A C 10 ? ? "O4'" A C 10 ? ? 119.45 109.80 9.65 0.90 N 7 1 "C1'" A C 10 ? ? "O4'" A C 10 ? ? "C4'" A C 10 ? ? 102.86 109.70 -6.84 0.70 N 8 1 "O4'" A C 10 ? ? "C1'" A C 10 ? ? N1 A C 10 ? ? 123.11 108.50 14.61 0.70 N 9 1 C2 A C 10 ? ? N1 A C 10 ? ? "C1'" A C 10 ? ? 125.59 118.80 6.79 1.10 N 10 1 "C3'" A C 10 ? ? "O3'" A C 10 ? ? P A G 11 ? ? 127.29 119.70 7.59 1.20 Y 11 1 N1 A G 11 ? ? C6 A G 11 ? ? O6 A G 11 ? ? 115.63 119.90 -4.27 0.60 N 12 1 "O4'" A A 13 ? ? "C1'" A A 13 ? ? N9 A A 13 ? ? 116.82 108.50 8.32 0.70 N 13 1 "O4'" A U 16 ? ? "C4'" A U 16 ? ? "C3'" A U 16 ? ? 97.39 104.00 -6.61 1.00 N 14 1 "C4'" A U 16 ? ? "C3'" A U 16 ? ? "C2'" A U 16 ? ? 95.75 102.60 -6.85 1.00 N 15 1 N1 A G 17 ? ? C6 A G 17 ? ? O6 A G 17 ? ? 115.89 119.90 -4.01 0.60 N 16 1 "O5'" A C 18 ? ? P A C 18 ? ? OP2 A C 18 ? ? 99.66 105.70 -6.04 0.90 N 17 1 N3 A C 18 ? ? C4 A C 18 ? ? C5 A C 18 ? ? 124.32 121.90 2.42 0.40 N 18 1 "O4'" A G 21 ? ? "C1'" A G 21 ? ? N9 A G 21 ? ? 112.89 108.50 4.39 0.70 N 19 1 "O4'" A A 22 ? ? "C1'" A A 22 ? ? N9 A A 22 ? ? 114.49 108.50 5.99 0.70 N 20 1 C8 A A 22 ? ? N9 A A 22 ? ? C4 A A 22 ? ? 103.22 105.80 -2.58 0.40 N 21 1 "O4'" A G 23 ? ? "C1'" A G 23 ? ? N9 A G 23 ? ? 113.84 108.50 5.34 0.70 N 22 1 "C3'" A G 24 ? ? "O3'" A G 24 ? ? P A C 25 ? ? 129.85 119.70 10.15 1.20 Y 23 1 "C1'" A C 25 ? ? "O4'" A C 25 ? ? "C4'" A C 25 ? ? 101.06 109.70 -8.64 0.70 N 24 1 "C3'" A A 26 ? ? "C2'" A A 26 ? ? "C1'" A A 26 ? ? 96.21 101.30 -5.09 0.70 N 25 1 "O4'" A A 26 ? ? "C1'" A A 26 ? ? N9 A A 26 ? ? 113.72 108.50 5.22 0.70 N 26 1 "C3'" A A 27 ? ? "O3'" A A 27 ? ? P A U 28 ? ? 132.97 119.70 13.27 1.20 Y 27 1 N1 A U 28 ? ? "C1'" A U 28 ? ? "C2'" A U 28 ? ? 122.71 114.00 8.71 1.30 N 28 1 "O4'" A U 28 ? ? "C1'" A U 28 ? ? N1 A U 28 ? ? 102.67 108.20 -5.53 0.80 N 29 1 "C3'" A U 28 ? ? "O3'" A U 28 ? ? P A U 29 ? ? 133.19 119.70 13.49 1.20 Y 30 1 "O5'" A U 29 ? ? P A U 29 ? ? OP2 A U 29 ? ? 99.93 105.70 -5.77 0.90 N 31 1 "C4'" A U 29 ? ? "C3'" A U 29 ? ? "C2'" A U 29 ? ? 96.58 102.60 -6.02 1.00 N 32 1 "C4'" A C 30 ? ? "C3'" A C 30 ? ? "C2'" A C 30 ? ? 96.44 102.60 -6.16 1.00 N 33 1 "O3'" A A 31 ? ? P A U 32 ? ? "O5'" A U 32 ? ? 92.08 104.00 -11.92 1.90 Y 34 1 "C4'" A G 33 ? ? "C3'" A G 33 ? ? "C2'" A G 33 ? ? 95.81 102.60 -6.79 1.00 N 35 1 N1 A G 33 ? ? C6 A G 33 ? ? O6 A G 33 ? ? 116.08 119.90 -3.82 0.60 N 36 1 "O4'" A A 35 ? ? "C1'" A A 35 ? ? N9 A A 35 ? ? 120.82 108.50 12.32 0.70 N 37 1 C5 A A 35 ? ? C6 A A 35 ? ? N6 A A 35 ? ? 118.67 123.70 -5.03 0.80 N 38 1 C5 A G 37 ? ? C6 A G 37 ? ? N1 A G 37 ? ? 114.63 111.50 3.13 0.50 N 39 1 N3 A U 38 ? ? C2 A U 38 ? ? O2 A U 38 ? ? 117.22 122.20 -4.98 0.70 N 40 1 OP1 A C 39 ? ? P A C 39 ? ? OP2 A C 39 ? ? 101.76 119.60 -17.84 1.50 N 41 1 "O4'" A C 39 ? ? "C4'" A C 39 ? ? "C3'" A C 39 ? ? 96.48 104.00 -7.52 1.00 N 42 1 "C3'" A C 39 ? ? "C2'" A C 39 ? ? "C1'" A C 39 ? ? 95.50 101.30 -5.80 0.70 N 43 1 "C3'" A C 39 ? ? "O3'" A C 39 ? ? P A C 40 ? ? 127.99 119.70 8.29 1.20 Y 44 1 "O4'" A C 41 ? ? "C1'" A C 41 ? ? N1 A C 41 ? ? 116.33 108.50 7.83 0.70 N 45 1 "C2'" A C 46 ? ? "C3'" A C 46 ? ? "O3'" A C 46 ? ? 124.72 113.70 11.02 1.60 N 46 1 "C4'" A C 46 ? ? "C3'" A C 46 ? ? "C2'" A C 46 ? ? 96.28 102.60 -6.32 1.00 N 47 1 "C3'" A C 46 ? ? "C2'" A C 46 ? ? "C1'" A C 46 ? ? 96.12 101.30 -5.18 0.70 N 48 1 "C3'" A C 46 ? ? "O3'" A C 46 ? ? P A C 47 ? ? 128.76 119.70 9.06 1.20 Y 49 1 "O4'" B G 1 ? ? "C1'" B G 1 ? ? N9 B G 1 ? ? 114.11 108.50 5.61 0.70 N 50 1 "O4'" B G 2 ? ? "C1'" B G 2 ? ? N9 B G 2 ? ? 113.56 108.50 5.06 0.70 N 51 1 N7 B G 2 ? ? C8 B G 2 ? ? N9 B G 2 ? ? 116.20 113.10 3.10 0.50 N 52 1 C8 B G 2 ? ? N9 B G 2 ? ? C4 B G 2 ? ? 103.40 106.40 -3.00 0.40 N 53 1 "C1'" B U 7 ? ? "O4'" B U 7 ? ? "C4'" B U 7 ? ? 104.16 109.70 -5.54 0.70 N 54 1 "O4'" B U 7 ? ? "C1'" B U 7 ? ? N1 B U 7 ? ? 115.09 108.50 6.59 0.70 N 55 1 "O4'" B A 13 ? ? "C1'" B A 13 ? ? N9 B A 13 ? ? 119.31 108.50 10.81 0.70 N 56 1 C5 B A 13 ? ? C6 B A 13 ? ? N1 B A 13 ? ? 120.77 117.70 3.07 0.50 N 57 1 "O4'" B U 16 ? ? "C4'" B U 16 ? ? "C3'" B U 16 ? ? 92.91 104.00 -11.09 1.00 N 58 1 N1 B U 16 ? ? C2 B U 16 ? ? N3 B U 16 ? ? 111.04 114.90 -3.86 0.60 N 59 1 C4 B U 16 ? ? C5 B U 16 ? ? C6 B U 16 ? ? 115.71 119.70 -3.99 0.60 N 60 1 N3 B C 18 ? ? C4 B C 18 ? ? C5 B C 18 ? ? 124.64 121.90 2.74 0.40 N 61 1 "O5'" B A 19 ? ? "C5'" B A 19 ? ? "C4'" B A 19 ? ? 103.17 109.40 -6.23 0.80 N 62 1 "C4'" B A 22 ? ? "C3'" B A 22 ? ? "C2'" B A 22 ? ? 96.45 102.60 -6.15 1.00 N 63 1 "O4'" B A 22 ? ? "C1'" B A 22 ? ? N9 B A 22 ? ? 115.19 108.50 6.69 0.70 N 64 1 C8 B A 22 ? ? N9 B A 22 ? ? C4 B A 22 ? ? 103.38 105.80 -2.42 0.40 N 65 1 "C3'" B C 25 ? ? "O3'" B C 25 ? ? P B A 26 ? ? 132.77 119.70 13.07 1.20 Y 66 1 "C3'" B A 27 ? ? "O3'" B A 27 ? ? P B U 28 ? ? 129.69 119.70 9.99 1.20 Y 67 1 "C3'" B U 28 ? ? "O3'" B U 28 ? ? P B U 29 ? ? 131.20 119.70 11.50 1.20 Y 68 1 N9 B A 31 ? ? C4 B A 31 ? ? C5 B A 31 ? ? 108.21 105.80 2.41 0.40 N 69 1 N1 B A 31 ? ? C6 B A 31 ? ? N6 B A 31 ? ? 113.68 118.60 -4.92 0.60 N 70 1 N9 B A 35 ? ? "C1'" B A 35 ? ? "C2'" B A 35 ? ? 104.37 112.00 -7.63 1.10 N 71 1 "O4'" B A 35 ? ? "C1'" B A 35 ? ? N9 B A 35 ? ? 119.28 108.50 10.78 0.70 N 72 1 "O5'" B U 38 ? ? "C5'" B U 38 ? ? "C4'" B U 38 ? ? 104.37 109.40 -5.03 0.80 N 73 1 "O4'" B U 38 ? ? "C4'" B U 38 ? ? "C3'" B U 38 ? ? 97.75 104.00 -6.25 1.00 N 74 1 C5 B U 38 ? ? C6 B U 38 ? ? N1 B U 38 ? ? 119.64 122.70 -3.06 0.50 N 75 1 OP1 B C 39 ? ? P B C 39 ? ? OP2 B C 39 ? ? 96.39 119.60 -23.21 1.50 N 76 1 "O4'" B C 39 ? ? "C4'" B C 39 ? ? "C3'" B C 39 ? ? 94.76 104.00 -9.24 1.00 N 77 1 "C2'" B C 39 ? ? "C3'" B C 39 ? ? "O3'" B C 39 ? ? 123.92 113.70 10.22 1.60 N 78 1 "C3'" B C 39 ? ? "C2'" B C 39 ? ? "C1'" B C 39 ? ? 90.78 101.30 -10.52 0.70 N 79 1 "O4'" B C 39 ? ? "C1'" B C 39 ? ? N1 B C 39 ? ? 112.71 108.50 4.21 0.70 N 80 1 N3 B C 39 ? ? C4 B C 39 ? ? C5 B C 39 ? ? 124.44 121.90 2.54 0.40 N 81 1 "C3'" B C 39 ? ? "O3'" B C 39 ? ? P B C 40 ? ? 131.66 119.70 11.96 1.20 Y 82 1 "C4'" B C 41 ? ? "C3'" B C 41 ? ? "C2'" B C 41 ? ? 95.92 102.60 -6.68 1.00 N 83 1 CB H ASP 47 ? ? CG H ASP 47 ? ? OD2 H ASP 47 ? ? 123.72 118.30 5.42 0.90 N 84 1 NE H ARG 83 ? ? CZ H ARG 83 ? ? NH1 H ARG 83 ? ? 125.69 120.30 5.39 0.50 N 85 1 NE H ARG 83 ? ? CZ H ARG 83 ? ? NH2 H ARG 83 ? ? 115.08 120.30 -5.22 0.50 N 86 1 CB G ASP 4 ? ? CG G ASP 4 ? ? OD2 G ASP 4 ? ? 125.13 118.30 6.83 0.90 N 87 1 N G GLY 43 ? ? CA G GLY 43 ? ? C G GLY 43 ? ? 128.23 113.10 15.13 2.50 N 88 1 NE G ARG 83 ? ? CZ G ARG 83 ? ? NH1 G ARG 83 ? ? 124.91 120.30 4.61 0.50 N 89 1 NE G ARG 83 ? ? CZ G ARG 83 ? ? NH2 G ARG 83 ? ? 115.84 120.30 -4.46 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN H 20 ? ? 49.65 25.30 2 1 GLU H 42 ? ? -92.06 36.58 3 1 PHE H 65 ? ? -101.76 76.06 4 1 VAL H 77 ? ? -118.66 -81.83 5 1 PRO H 92 ? ? -38.34 131.94 6 1 VAL H 94 ? ? 87.12 26.73 7 1 LEU H 98 ? ? 170.21 -6.47 8 1 ASN G 20 ? ? 54.03 19.83 9 1 GLU G 51 ? ? -81.81 -150.42 10 1 THR G 54 ? ? 56.75 -50.75 11 1 LYS G 55 ? ? -115.20 74.41 12 1 PHE G 65 ? ? -102.33 79.14 13 1 VAL G 77 ? ? -115.04 -70.08 14 1 PRO G 92 ? ? -38.16 133.33 15 1 VAL G 94 ? ? 85.20 27.19 16 1 LEU G 98 ? ? 174.30 -8.64 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H SER 1 ? C SER 1 2 1 Y 1 H MET 2 ? C MET 2 3 1 Y 1 G SER 1 ? D SER 1 4 1 Y 1 G MET 2 ? D MET 2 5 1 Y 1 G GLN 3 ? D GLN 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HOH O O N N 247 HOH H1 H N N 248 HOH H2 H N N 249 ILE N N N N 250 ILE CA C N S 251 ILE C C N N 252 ILE O O N N 253 ILE CB C N S 254 ILE CG1 C N N 255 ILE CG2 C N N 256 ILE CD1 C N N 257 ILE OXT O N N 258 ILE H H N N 259 ILE H2 H N N 260 ILE HA H N N 261 ILE HB H N N 262 ILE HG12 H N N 263 ILE HG13 H N N 264 ILE HG21 H N N 265 ILE HG22 H N N 266 ILE HG23 H N N 267 ILE HD11 H N N 268 ILE HD12 H N N 269 ILE HD13 H N N 270 ILE HXT H N N 271 LEU N N N N 272 LEU CA C N S 273 LEU C C N N 274 LEU O O N N 275 LEU CB C N N 276 LEU CG C N N 277 LEU CD1 C N N 278 LEU CD2 C N N 279 LEU OXT O N N 280 LEU H H N N 281 LEU H2 H N N 282 LEU HA H N N 283 LEU HB2 H N N 284 LEU HB3 H N N 285 LEU HG H N N 286 LEU HD11 H N N 287 LEU HD12 H N N 288 LEU HD13 H N N 289 LEU HD21 H N N 290 LEU HD22 H N N 291 LEU HD23 H N N 292 LEU HXT H N N 293 LYS N N N N 294 LYS CA C N S 295 LYS C C N N 296 LYS O O N N 297 LYS CB C N N 298 LYS CG C N N 299 LYS CD C N N 300 LYS CE C N N 301 LYS NZ N N N 302 LYS OXT O N N 303 LYS H H N N 304 LYS H2 H N N 305 LYS HA H N N 306 LYS HB2 H N N 307 LYS HB3 H N N 308 LYS HG2 H N N 309 LYS HG3 H N N 310 LYS HD2 H N N 311 LYS HD3 H N N 312 LYS HE2 H N N 313 LYS HE3 H N N 314 LYS HZ1 H N N 315 LYS HZ2 H N N 316 LYS HZ3 H N N 317 LYS HXT H N N 318 MET N N N N 319 MET CA C N S 320 MET C C N N 321 MET O O N N 322 MET CB C N N 323 MET CG C N N 324 MET SD S N N 325 MET CE C N N 326 MET OXT O N N 327 MET H H N N 328 MET H2 H N N 329 MET HA H N N 330 MET HB2 H N N 331 MET HB3 H N N 332 MET HG2 H N N 333 MET HG3 H N N 334 MET HE1 H N N 335 MET HE2 H N N 336 MET HE3 H N N 337 MET HXT H N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 THR N N N N 393 THR CA C N S 394 THR C C N N 395 THR O O N N 396 THR CB C N R 397 THR OG1 O N N 398 THR CG2 C N N 399 THR OXT O N N 400 THR H H N N 401 THR H2 H N N 402 THR HA H N N 403 THR HB H N N 404 THR HG1 H N N 405 THR HG21 H N N 406 THR HG22 H N N 407 THR HG23 H N N 408 THR HXT H N N 409 TYR N N N N 410 TYR CA C N S 411 TYR C C N N 412 TYR O O N N 413 TYR CB C N N 414 TYR CG C Y N 415 TYR CD1 C Y N 416 TYR CD2 C Y N 417 TYR CE1 C Y N 418 TYR CE2 C Y N 419 TYR CZ C Y N 420 TYR OH O N N 421 TYR OXT O N N 422 TYR H H N N 423 TYR H2 H N N 424 TYR HA H N N 425 TYR HB2 H N N 426 TYR HB3 H N N 427 TYR HD1 H N N 428 TYR HD2 H N N 429 TYR HE1 H N N 430 TYR HE2 H N N 431 TYR HH H N N 432 TYR HXT H N N 433 U OP3 O N N 434 U P P N N 435 U OP1 O N N 436 U OP2 O N N 437 U "O5'" O N N 438 U "C5'" C N N 439 U "C4'" C N R 440 U "O4'" O N N 441 U "C3'" C N S 442 U "O3'" O N N 443 U "C2'" C N R 444 U "O2'" O N N 445 U "C1'" C N R 446 U N1 N N N 447 U C2 C N N 448 U O2 O N N 449 U N3 N N N 450 U C4 C N N 451 U O4 O N N 452 U C5 C N N 453 U C6 C N N 454 U HOP3 H N N 455 U HOP2 H N N 456 U "H5'" H N N 457 U "H5''" H N N 458 U "H4'" H N N 459 U "H3'" H N N 460 U "HO3'" H N N 461 U "H2'" H N N 462 U "HO2'" H N N 463 U "H1'" H N N 464 U H3 H N N 465 U H5 H N N 466 U H6 H N N 467 VAL N N N N 468 VAL CA C N S 469 VAL C C N N 470 VAL O O N N 471 VAL CB C N N 472 VAL CG1 C N N 473 VAL CG2 C N N 474 VAL OXT O N N 475 VAL H H N N 476 VAL H2 H N N 477 VAL HA H N N 478 VAL HB H N N 479 VAL HG11 H N N 480 VAL HG12 H N N 481 VAL HG13 H N N 482 VAL HG21 H N N 483 VAL HG22 H N N 484 VAL HG23 H N N 485 VAL HXT H N N 486 ZN ZN ZN N N 487 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HOH O H1 sing N N 244 HOH O H2 sing N N 245 ILE N CA sing N N 246 ILE N H sing N N 247 ILE N H2 sing N N 248 ILE CA C sing N N 249 ILE CA CB sing N N 250 ILE CA HA sing N N 251 ILE C O doub N N 252 ILE C OXT sing N N 253 ILE CB CG1 sing N N 254 ILE CB CG2 sing N N 255 ILE CB HB sing N N 256 ILE CG1 CD1 sing N N 257 ILE CG1 HG12 sing N N 258 ILE CG1 HG13 sing N N 259 ILE CG2 HG21 sing N N 260 ILE CG2 HG22 sing N N 261 ILE CG2 HG23 sing N N 262 ILE CD1 HD11 sing N N 263 ILE CD1 HD12 sing N N 264 ILE CD1 HD13 sing N N 265 ILE OXT HXT sing N N 266 LEU N CA sing N N 267 LEU N H sing N N 268 LEU N H2 sing N N 269 LEU CA C sing N N 270 LEU CA CB sing N N 271 LEU CA HA sing N N 272 LEU C O doub N N 273 LEU C OXT sing N N 274 LEU CB CG sing N N 275 LEU CB HB2 sing N N 276 LEU CB HB3 sing N N 277 LEU CG CD1 sing N N 278 LEU CG CD2 sing N N 279 LEU CG HG sing N N 280 LEU CD1 HD11 sing N N 281 LEU CD1 HD12 sing N N 282 LEU CD1 HD13 sing N N 283 LEU CD2 HD21 sing N N 284 LEU CD2 HD22 sing N N 285 LEU CD2 HD23 sing N N 286 LEU OXT HXT sing N N 287 LYS N CA sing N N 288 LYS N H sing N N 289 LYS N H2 sing N N 290 LYS CA C sing N N 291 LYS CA CB sing N N 292 LYS CA HA sing N N 293 LYS C O doub N N 294 LYS C OXT sing N N 295 LYS CB CG sing N N 296 LYS CB HB2 sing N N 297 LYS CB HB3 sing N N 298 LYS CG CD sing N N 299 LYS CG HG2 sing N N 300 LYS CG HG3 sing N N 301 LYS CD CE sing N N 302 LYS CD HD2 sing N N 303 LYS CD HD3 sing N N 304 LYS CE NZ sing N N 305 LYS CE HE2 sing N N 306 LYS CE HE3 sing N N 307 LYS NZ HZ1 sing N N 308 LYS NZ HZ2 sing N N 309 LYS NZ HZ3 sing N N 310 LYS OXT HXT sing N N 311 MET N CA sing N N 312 MET N H sing N N 313 MET N H2 sing N N 314 MET CA C sing N N 315 MET CA CB sing N N 316 MET CA HA sing N N 317 MET C O doub N N 318 MET C OXT sing N N 319 MET CB CG sing N N 320 MET CB HB2 sing N N 321 MET CB HB3 sing N N 322 MET CG SD sing N N 323 MET CG HG2 sing N N 324 MET CG HG3 sing N N 325 MET SD CE sing N N 326 MET CE HE1 sing N N 327 MET CE HE2 sing N N 328 MET CE HE3 sing N N 329 MET OXT HXT sing N N 330 PHE N CA sing N N 331 PHE N H sing N N 332 PHE N H2 sing N N 333 PHE CA C sing N N 334 PHE CA CB sing N N 335 PHE CA HA sing N N 336 PHE C O doub N N 337 PHE C OXT sing N N 338 PHE CB CG sing N N 339 PHE CB HB2 sing N N 340 PHE CB HB3 sing N N 341 PHE CG CD1 doub Y N 342 PHE CG CD2 sing Y N 343 PHE CD1 CE1 sing Y N 344 PHE CD1 HD1 sing N N 345 PHE CD2 CE2 doub Y N 346 PHE CD2 HD2 sing N N 347 PHE CE1 CZ doub Y N 348 PHE CE1 HE1 sing N N 349 PHE CE2 CZ sing Y N 350 PHE CE2 HE2 sing N N 351 PHE CZ HZ sing N N 352 PHE OXT HXT sing N N 353 PRO N CA sing N N 354 PRO N CD sing N N 355 PRO N H sing N N 356 PRO CA C sing N N 357 PRO CA CB sing N N 358 PRO CA HA sing N N 359 PRO C O doub N N 360 PRO C OXT sing N N 361 PRO CB CG sing N N 362 PRO CB HB2 sing N N 363 PRO CB HB3 sing N N 364 PRO CG CD sing N N 365 PRO CG HG2 sing N N 366 PRO CG HG3 sing N N 367 PRO CD HD2 sing N N 368 PRO CD HD3 sing N N 369 PRO OXT HXT sing N N 370 SER N CA sing N N 371 SER N H sing N N 372 SER N H2 sing N N 373 SER CA C sing N N 374 SER CA CB sing N N 375 SER CA HA sing N N 376 SER C O doub N N 377 SER C OXT sing N N 378 SER CB OG sing N N 379 SER CB HB2 sing N N 380 SER CB HB3 sing N N 381 SER OG HG sing N N 382 SER OXT HXT sing N N 383 THR N CA sing N N 384 THR N H sing N N 385 THR N H2 sing N N 386 THR CA C sing N N 387 THR CA CB sing N N 388 THR CA HA sing N N 389 THR C O doub N N 390 THR C OXT sing N N 391 THR CB OG1 sing N N 392 THR CB CG2 sing N N 393 THR CB HB sing N N 394 THR OG1 HG1 sing N N 395 THR CG2 HG21 sing N N 396 THR CG2 HG22 sing N N 397 THR CG2 HG23 sing N N 398 THR OXT HXT sing N N 399 TYR N CA sing N N 400 TYR N H sing N N 401 TYR N H2 sing N N 402 TYR CA C sing N N 403 TYR CA CB sing N N 404 TYR CA HA sing N N 405 TYR C O doub N N 406 TYR C OXT sing N N 407 TYR CB CG sing N N 408 TYR CB HB2 sing N N 409 TYR CB HB3 sing N N 410 TYR CG CD1 doub Y N 411 TYR CG CD2 sing Y N 412 TYR CD1 CE1 sing Y N 413 TYR CD1 HD1 sing N N 414 TYR CD2 CE2 doub Y N 415 TYR CD2 HD2 sing N N 416 TYR CE1 CZ doub Y N 417 TYR CE1 HE1 sing N N 418 TYR CE2 CZ sing Y N 419 TYR CE2 HE2 sing N N 420 TYR CZ OH sing N N 421 TYR OH HH sing N N 422 TYR OXT HXT sing N N 423 U OP3 P sing N N 424 U OP3 HOP3 sing N N 425 U P OP1 doub N N 426 U P OP2 sing N N 427 U P "O5'" sing N N 428 U OP2 HOP2 sing N N 429 U "O5'" "C5'" sing N N 430 U "C5'" "C4'" sing N N 431 U "C5'" "H5'" sing N N 432 U "C5'" "H5''" sing N N 433 U "C4'" "O4'" sing N N 434 U "C4'" "C3'" sing N N 435 U "C4'" "H4'" sing N N 436 U "O4'" "C1'" sing N N 437 U "C3'" "O3'" sing N N 438 U "C3'" "C2'" sing N N 439 U "C3'" "H3'" sing N N 440 U "O3'" "HO3'" sing N N 441 U "C2'" "O2'" sing N N 442 U "C2'" "C1'" sing N N 443 U "C2'" "H2'" sing N N 444 U "O2'" "HO2'" sing N N 445 U "C1'" N1 sing N N 446 U "C1'" "H1'" sing N N 447 U N1 C2 sing N N 448 U N1 C6 sing N N 449 U C2 O2 doub N N 450 U C2 N3 sing N N 451 U N3 C4 sing N N 452 U N3 H3 sing N N 453 U C4 O4 doub N N 454 U C4 C5 sing N N 455 U C5 C6 doub N N 456 U C5 H5 sing N N 457 U C6 H6 sing N N 458 VAL N CA sing N N 459 VAL N H sing N N 460 VAL N H2 sing N N 461 VAL CA C sing N N 462 VAL CA CB sing N N 463 VAL CA HA sing N N 464 VAL C O doub N N 465 VAL C OXT sing N N 466 VAL CB CG1 sing N N 467 VAL CB CG2 sing N N 468 VAL CB HB sing N N 469 VAL CG1 HG11 sing N N 470 VAL CG1 HG12 sing N N 471 VAL CG1 HG13 sing N N 472 VAL CG2 HG21 sing N N 473 VAL CG2 HG22 sing N N 474 VAL CG2 HG23 sing N N 475 VAL OXT HXT sing N N 476 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1S03 'double helix' 1S03 'a-form double helix' 1S03 'hairpin loop' 1S03 'bulge loop' 1S03 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 47 1_555 -1.199 -0.163 -0.329 -6.082 -8.191 -6.287 1 A_G1:C47_A A 1 ? A 47 ? 19 1 1 A G 2 1_555 A C 46 1_555 -0.420 0.388 1.097 4.205 -19.462 11.032 2 A_G2:C46_A A 2 ? A 46 ? ? 1 1 A A 3 1_555 A U 45 1_555 0.730 -0.212 -0.274 -10.119 -16.276 -5.355 3 A_A3:U45_A A 3 ? A 45 ? 20 1 1 A C 4 1_555 A G 44 1_555 -0.870 -0.148 0.162 -0.176 -12.355 -3.997 4 A_C4:G44_A A 4 ? A 44 ? 19 1 1 A G 5 1_555 A C 43 1_555 0.736 -0.154 -0.432 -13.644 -17.552 -4.415 5 A_G5:C43_A A 5 ? A 43 ? 19 1 1 A A 6 1_555 A U 42 1_555 -0.856 -0.384 0.190 -8.462 -9.104 0.884 6 A_A6:U42_A A 6 ? A 42 ? 20 1 1 A G 8 1_555 A C 41 1_555 0.391 -0.239 -0.031 -8.037 -20.317 -1.936 7 A_G8:C41_A A 8 ? A 41 ? 19 1 1 A G 9 1_555 A C 40 1_555 0.450 -0.104 -0.154 -4.131 -7.126 -9.199 8 A_G9:C40_A A 9 ? A 40 ? 19 1 1 A G 11 1_555 A C 39 1_555 -0.081 -0.140 -0.043 -9.097 -11.246 -0.851 9 A_G11:C39_A A 11 ? A 39 ? 19 1 1 A A 12 1_555 A U 38 1_555 0.217 -0.050 -0.401 -14.929 -17.198 -6.214 10 A_A12:U38_A A 12 ? A 38 ? 20 1 1 A A 14 1_555 A A 13 1_555 -7.203 0.191 -1.393 24.823 -11.555 -6.116 11 A_A14:A13_A A 14 ? A 13 ? ? ? 1 A C 15 1_555 A G 37 1_555 0.067 -0.185 -0.024 15.656 -19.521 -0.815 12 A_C15:G37_A A 15 ? A 37 ? 19 1 1 A U 16 1_555 A A 36 1_555 -0.262 -0.236 -0.056 -4.430 0.382 0.157 13 A_U16:A36_A A 16 ? A 36 ? 20 1 1 A G 17 1_555 A C 34 1_555 -0.342 -0.265 0.256 3.480 -15.901 -3.726 14 A_G17:C34_A A 17 ? A 34 ? 19 1 1 A C 18 1_555 A G 33 1_555 0.038 -0.127 0.166 -0.191 -16.996 3.310 15 A_C18:G33_A A 18 ? A 33 ? 19 1 1 A A 19 1_555 A U 32 1_555 -0.015 -0.056 -0.110 -4.794 -14.149 2.230 16 A_A19:U32_A A 19 ? A 32 ? 20 1 1 A U 20 1_555 A A 31 1_555 -0.042 -0.115 -0.097 -2.496 -10.521 4.088 17 A_U20:A31_A A 20 ? A 31 ? 20 1 1 A G 21 1_555 A C 30 1_555 0.001 -0.155 0.097 -2.410 -13.192 0.873 18 A_G21:C30_A A 21 ? A 30 ? 19 1 1 A A 22 1_555 A U 29 1_555 -0.034 -0.106 0.150 4.802 -9.724 8.593 19 A_A22:U29_A A 22 ? A 29 ? 20 1 1 B G 1 1_555 B C 47 1_555 -1.127 -0.411 -0.051 -7.462 -10.711 -0.235 20 B_G1:C47_B B 1 ? B 47 ? 19 1 1 B G 2 1_555 B C 46 1_555 -0.646 0.029 0.042 -5.373 -13.128 9.397 21 B_G2:C46_B B 2 ? B 46 ? 19 1 1 B A 3 1_555 B U 45 1_555 0.208 0.028 0.377 -4.529 -9.157 7.449 22 B_A3:U45_B B 3 ? B 45 ? 20 1 1 B C 4 1_555 B G 44 1_555 0.186 -0.038 0.361 -0.187 -5.537 -2.076 23 B_C4:G44_B B 4 ? B 44 ? 19 1 1 B G 5 1_555 B C 43 1_555 -0.187 -0.230 0.233 -7.393 -15.443 1.330 24 B_G5:C43_B B 5 ? B 43 ? 19 1 1 B A 6 1_555 B U 42 1_555 -0.153 -0.341 0.380 -2.979 -8.148 -0.323 25 B_A6:U42_B B 6 ? B 42 ? 20 1 1 B G 8 1_555 B C 41 1_555 0.054 -0.168 0.019 -10.305 -17.215 5.141 26 B_G8:C41_B B 8 ? B 41 ? 19 1 1 B G 9 1_555 B C 40 1_555 0.347 -0.048 0.049 -6.178 -7.300 3.278 27 B_G9:C40_B B 9 ? B 40 ? 19 1 1 B G 11 1_555 B C 39 1_555 -0.105 -0.127 -0.221 -10.491 -13.301 -0.456 28 B_G11:C39_B B 11 ? B 39 ? 19 1 1 B A 12 1_555 B U 38 1_555 0.327 -0.079 -0.413 -16.432 -14.493 -6.652 29 B_A12:U38_B B 12 ? B 38 ? 20 1 1 B A 14 1_555 B A 13 1_555 -7.195 0.191 -1.414 24.435 -10.676 -5.088 30 B_A14:A13_B B 14 ? B 13 ? ? ? 1 B C 15 1_555 B G 37 1_555 0.199 -0.159 -0.291 21.958 -20.740 -2.797 31 B_C15:G37_B B 15 ? B 37 ? 19 1 1 B U 16 1_555 B A 36 1_555 -0.281 -0.345 -0.117 -1.883 -1.919 -1.142 32 B_U16:A36_B B 16 ? B 36 ? 20 1 1 B G 17 1_555 B C 34 1_555 -0.353 -0.316 0.301 6.264 -13.860 -4.889 33 B_G17:C34_B B 17 ? B 34 ? 19 1 1 B C 18 1_555 B G 33 1_555 0.117 -0.110 0.165 0.282 -19.591 3.562 34 B_C18:G33_B B 18 ? B 33 ? 19 1 1 B A 19 1_555 B U 32 1_555 0.225 -0.071 -0.070 -0.854 -13.130 1.121 35 B_A19:U32_B B 19 ? B 32 ? 20 1 1 B U 20 1_555 B A 31 1_555 0.085 -0.225 0.035 -0.543 -10.734 1.437 36 B_U20:A31_B B 20 ? B 31 ? 20 1 1 B G 21 1_555 B C 30 1_555 0.162 -0.241 -0.088 -2.211 -17.331 0.525 37 B_G21:C30_B B 21 ? B 30 ? 19 1 1 B A 22 1_555 B U 29 1_555 0.408 0.071 0.124 5.820 -8.500 5.097 38 B_A22:U29_B B 22 ? B 29 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 47 1_555 A G 2 1_555 A C 46 1_555 1.471 -1.393 2.718 -6.187 7.003 35.596 -2.929 -2.969 2.138 11.219 9.911 36.764 1 AA_G1G2:C46C47_AA A 1 ? A 47 ? A 2 ? A 46 ? 1 A G 2 1_555 A C 46 1_555 A A 3 1_555 A U 45 1_555 -0.847 -1.615 3.586 12.247 6.869 44.415 -2.644 2.139 2.997 8.829 -15.741 46.474 2 AA_G2A3:U45C46_AA A 2 ? A 46 ? A 3 ? A 45 ? 1 A A 3 1_555 A U 45 1_555 A C 4 1_555 A G 44 1_555 0.951 -2.656 2.854 1.542 6.617 10.461 -17.475 -3.154 1.107 32.207 -7.505 12.468 3 AA_A3C4:G44U45_AA A 3 ? A 45 ? A 4 ? A 44 ? 1 A C 4 1_555 A G 44 1_555 A G 5 1_555 A C 43 1_555 -0.125 -1.608 3.451 5.132 12.424 39.841 -3.519 0.701 2.812 17.634 -7.284 41.960 4 AA_C4G5:C43G44_AA A 4 ? A 44 ? A 5 ? A 43 ? 1 A G 5 1_555 A C 43 1_555 A A 6 1_555 A U 42 1_555 -0.212 -2.406 2.985 -3.283 10.935 29.345 -6.054 -0.093 1.994 20.628 6.192 31.443 5 AA_G5A6:U42C43_AA A 5 ? A 43 ? A 6 ? A 42 ? 1 A A 6 1_555 A U 42 1_555 A G 8 1_555 A C 41 1_555 1.578 -2.319 3.459 8.847 5.934 22.724 -7.206 -0.858 3.148 14.107 -21.032 25.067 6 AA_A6G8:C41U42_AA A 6 ? A 42 ? A 8 ? A 41 ? 1 A G 8 1_555 A C 41 1_555 A G 9 1_555 A C 40 1_555 -0.979 -1.505 3.127 -1.285 8.801 31.931 -3.979 1.523 2.665 15.622 2.280 33.115 7 AA_G8G9:C40C41_AA A 8 ? A 41 ? A 9 ? A 40 ? 1 A G 9 1_555 A C 40 1_555 A G 11 1_555 A C 39 1_555 -0.101 -2.289 3.333 0.377 8.745 35.151 -4.838 0.213 2.703 14.210 -0.612 36.191 8 AA_G9G11:C39C40_AA A 9 ? A 40 ? A 11 ? A 39 ? 1 A G 11 1_555 A C 39 1_555 A A 12 1_555 A U 38 1_555 -0.869 -1.819 3.389 2.448 7.527 38.230 -3.611 1.590 2.934 11.344 -3.690 39.011 9 AA_G11A12:U38C39_AA A 11 ? A 39 ? A 12 ? A 38 ? 1 A A 12 1_555 A U 38 1_555 A A 14 1_555 A A 13 1_555 -1.844 0.030 1.961 19.177 6.372 27.321 -0.392 4.499 0.571 11.678 -35.147 33.867 10 AA_A12A14:A13U38_AA A 12 ? A 38 ? A 14 ? A 13 ? 1 A A 14 1_555 A A 13 1_555 A C 15 1_555 A G 37 1_555 -2.633 -0.880 2.079 0.313 7.837 35.197 -2.095 4.284 1.824 12.764 -0.510 36.033 11 AA_A14C15:G37A13_AA A 14 ? A 13 ? A 15 ? A 37 ? 1 A C 15 1_555 A G 37 1_555 A U 16 1_555 A A 36 1_555 0.258 -2.709 3.793 -1.462 5.144 29.433 -6.409 -0.830 3.267 10.021 2.847 29.904 12 AA_C15U16:A36G37_AA A 15 ? A 37 ? A 16 ? A 36 ? 1 A U 16 1_555 A A 36 1_555 A G 17 1_555 A C 34 1_555 2.587 -1.022 3.110 -4.517 8.955 55.881 -1.526 -2.951 2.731 9.470 4.777 56.703 13 AA_U16G17:C34A36_AA A 16 ? A 36 ? A 17 ? A 34 ? 1 A G 17 1_555 A C 34 1_555 A C 18 1_555 A G 33 1_555 0.297 -1.431 3.333 -0.202 9.601 36.339 -3.434 -0.487 2.875 15.074 0.317 37.545 14 AA_G17C18:G33C34_AA A 17 ? A 34 ? A 18 ? A 33 ? 1 A C 18 1_555 A G 33 1_555 A A 19 1_555 A U 32 1_555 -0.182 -1.633 3.365 0.318 14.236 26.810 -5.742 0.408 2.230 28.308 -0.632 30.296 15 AA_C18A19:U32G33_AA A 18 ? A 33 ? A 19 ? A 32 ? 1 A A 19 1_555 A U 32 1_555 A U 20 1_555 A A 31 1_555 0.040 -1.374 3.143 -1.728 12.195 31.068 -4.187 -0.324 2.440 21.728 3.079 33.365 16 AA_A19U20:A31U32_AA A 19 ? A 32 ? A 20 ? A 31 ? 1 A U 20 1_555 A A 31 1_555 A G 21 1_555 A C 30 1_555 0.406 -1.585 3.267 -0.494 7.209 30.272 -4.256 -0.846 2.817 13.563 0.929 31.103 17 AA_U20G21:C30A31_AA A 20 ? A 31 ? A 21 ? A 30 ? 1 A G 21 1_555 A C 30 1_555 A A 22 1_555 A U 29 1_555 0.352 -1.922 3.116 -0.273 2.749 29.408 -4.311 -0.744 2.925 5.400 0.537 29.535 18 AA_G21A22:U29C30_AA A 21 ? A 30 ? A 22 ? A 29 ? 1 B G 1 1_555 B C 47 1_555 B G 2 1_555 B C 46 1_555 0.202 -1.380 3.254 -0.664 -0.128 34.552 -2.304 -0.443 3.255 -0.215 1.118 34.559 19 BB_G1G2:C46C47_BB B 1 ? B 47 ? B 2 ? B 46 ? 1 B G 2 1_555 B C 46 1_555 B A 3 1_555 B U 45 1_555 -0.044 -1.587 3.015 -3.233 7.881 36.045 -3.426 -0.310 2.616 12.522 5.137 37.005 20 BB_G2A3:U45C46_BB B 2 ? B 46 ? B 3 ? B 45 ? 1 B A 3 1_555 B U 45 1_555 B C 4 1_555 B G 44 1_555 -0.030 -1.419 3.046 2.693 8.882 31.504 -3.845 0.457 2.552 15.931 -4.830 32.810 21 BB_A3C4:G44U45_BB B 3 ? B 45 ? B 4 ? B 44 ? 1 B C 4 1_555 B G 44 1_555 B G 5 1_555 B C 43 1_555 0.530 -2.190 3.176 5.181 7.371 27.465 -5.869 -0.025 2.568 15.021 -10.559 28.878 22 BB_C4G5:C43G44_BB B 4 ? B 44 ? B 5 ? B 43 ? 1 B G 5 1_555 B C 43 1_555 B A 6 1_555 B U 42 1_555 0.075 -1.553 3.051 0.651 8.638 32.608 -3.906 -0.036 2.568 15.055 -1.135 33.709 23 BB_G5A6:U42C43_BB B 5 ? B 43 ? B 6 ? B 42 ? 1 B A 6 1_555 B U 42 1_555 B G 8 1_555 B C 41 1_555 1.202 -2.146 3.430 8.868 7.003 29.673 -5.257 -0.519 3.081 13.092 -16.578 31.707 24 BB_A6G8:C41U42_BB B 6 ? B 42 ? B 8 ? B 41 ? 1 B G 8 1_555 B C 41 1_555 B G 9 1_555 B C 40 1_555 -1.034 -1.733 3.155 -2.284 4.155 33.483 -3.613 1.430 2.987 7.167 3.940 33.808 25 BB_G8G9:C40C41_BB B 8 ? B 41 ? B 9 ? B 40 ? 1 B G 9 1_555 B C 40 1_555 B G 11 1_555 B C 39 1_555 -0.843 -1.839 3.213 2.553 6.297 36.748 -3.644 1.629 2.808 9.884 -4.007 37.349 26 BB_G9G11:C39C40_BB B 9 ? B 40 ? B 11 ? B 39 ? 1 B G 11 1_555 B C 39 1_555 B A 12 1_555 B U 38 1_555 -0.992 -1.744 3.406 -0.689 9.421 38.221 -3.691 1.394 2.929 14.125 1.034 39.329 27 BB_G11A12:U38C39_BB B 11 ? B 39 ? B 12 ? B 38 ? 1 B A 12 1_555 B U 38 1_555 B A 14 1_555 B A 13 1_555 -1.840 0.062 1.852 19.751 3.771 27.692 -0.131 4.377 0.474 6.852 -35.885 34.107 28 BB_A12A14:A13U38_BB B 12 ? B 38 ? B 14 ? B 13 ? 1 B A 14 1_555 B A 13 1_555 B C 15 1_555 B G 37 1_555 -2.676 -0.741 2.004 2.020 7.033 35.855 -1.732 4.423 1.685 11.279 -3.240 36.570 29 BB_A14C15:G37A13_BB B 14 ? B 13 ? B 15 ? B 37 ? 1 B C 15 1_555 B G 37 1_555 B U 16 1_555 B A 36 1_555 0.311 -2.699 3.945 -2.039 8.539 27.369 -7.518 -1.124 2.955 17.485 4.174 28.717 30 BB_C15U16:A36G37_BB B 15 ? B 37 ? B 16 ? B 36 ? 1 B U 16 1_555 B A 36 1_555 B G 17 1_555 B C 34 1_555 2.591 -1.118 3.105 -6.752 9.147 56.467 -1.600 -3.016 2.611 9.560 7.057 57.508 31 BB_U16G17:C34A36_BB B 16 ? B 36 ? B 17 ? B 34 ? 1 B G 17 1_555 B C 34 1_555 B C 18 1_555 B G 33 1_555 0.344 -1.454 3.436 -0.034 8.370 36.625 -3.357 -0.539 3.042 13.109 0.054 37.537 32 BB_G17C18:G33C34_BB B 17 ? B 34 ? B 18 ? B 33 ? 1 B C 18 1_555 B G 33 1_555 B A 19 1_555 B U 32 1_555 -0.271 -1.717 3.212 1.250 15.890 28.273 -5.466 0.673 1.978 29.730 -2.338 32.376 33 BB_C18A19:U32G33_BB B 18 ? B 33 ? B 19 ? B 32 ? 1 B A 19 1_555 B U 32 1_555 B U 20 1_555 B A 31 1_555 -0.048 -1.303 3.227 -2.348 8.372 30.733 -3.795 -0.312 2.780 15.413 4.324 31.911 34 BB_A19U20:A31U32_BB B 19 ? B 32 ? B 20 ? B 31 ? 1 B U 20 1_555 B A 31 1_555 B G 21 1_555 B C 30 1_555 0.493 -1.590 3.360 4.002 8.984 29.660 -4.608 -0.179 2.811 16.972 -7.560 31.214 35 BB_U20G21:C30A31_BB B 20 ? B 31 ? B 21 ? B 30 ? 1 B G 21 1_555 B C 30 1_555 B A 22 1_555 B U 29 1_555 0.122 -1.899 3.086 -1.668 5.200 29.284 -4.666 -0.548 2.705 10.173 3.263 29.778 36 BB_G21A22:U29C30_BB B 21 ? B 30 ? B 22 ? B 29 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1J5E _pdbx_initial_refinement_model.details 'PDB entry 1J5E' #