HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-DEC-03 1S04 TITLE SOLUTION NMR STRUCTURE OF PROTEIN PF0455 FROM PYROCOCCUS FURIOSUS. TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PFR13 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PF0455; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 GENE: PF0455; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPFR13-21.2 KEYWDS STRUCTURAL GENOMICS, PFR13, PF0455, REDUCED-DIMENSIONALITY, GFT, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,R.XIAO,D.K.SUKUMARAN,T.ACTON,G.T.MONTELIONE,T.SZYPERSKI, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 01-MAY-24 1S04 1 REMARK REVDAT 4 05-FEB-20 1S04 1 REMARK REVDAT 3 24-FEB-09 1S04 1 VERSN REVDAT 2 25-JAN-05 1S04 1 AUTHOR REVDAT 1 04-JAN-05 1S04 0 JRNL AUTH G.LIU,R.XIAO,D.K.SUKUMARAN,T.ACTON,G.T.MONTELIONE, JRNL AUTH 2 T.SZYPERSKI JRNL TITL SOLUTION STRUCTURE OF THE HYPOTHETICAL PROTEIN PF0455 FROM JRNL TITL 2 PYROCOCCUS FURIOSUS: NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM TARGET PFR13 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUNTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S04 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-03. REMARK 100 THE DEPOSITION ID IS D_1000021198. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM MES, 100 MM NACL, 10 MM REMARK 210 DTT, 5 MM CACL2, 0.02% NAN3, 95% REMARK 210 H2O/5% D2O, PROTEIN U-15N,13C REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; HNHA; 3D RD REMARK 210 HCCHCOSY; GFT (4,3)D HNNCACBCA; REMARK 210 GFT (4,3)D HNN(CO)CACBCA REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.3, NMRPIPE 1.0 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING, TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ILE A 40 O VAL A 49 1.55 REMARK 500 O PHE A 60 H LEU A 64 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 21 -114.12 -125.70 REMARK 500 1 ARG A 25 104.59 158.46 REMARK 500 1 LEU A 26 133.66 -39.30 REMARK 500 1 ASP A 38 -166.45 -164.88 REMARK 500 1 VAL A 72 -52.44 -133.99 REMARK 500 1 VAL A 76 148.73 -39.43 REMARK 500 1 LEU A 108 51.06 -100.74 REMARK 500 2 LYS A 21 -113.53 -123.04 REMARK 500 2 ARG A 25 114.50 171.64 REMARK 500 2 LEU A 26 135.40 -39.41 REMARK 500 2 TYR A 27 89.98 -69.24 REMARK 500 2 VAL A 72 -48.05 -139.60 REMARK 500 2 VAL A 76 148.60 -39.97 REMARK 500 2 GLU A 109 -98.21 -126.24 REMARK 500 3 LYS A 21 -111.37 -124.54 REMARK 500 3 ARG A 25 129.24 161.01 REMARK 500 3 LEU A 26 124.81 -37.43 REMARK 500 3 ASP A 28 -176.00 -178.52 REMARK 500 3 ASP A 38 -169.56 -164.33 REMARK 500 3 VAL A 76 152.05 -39.82 REMARK 500 4 LYS A 21 -115.27 -119.43 REMARK 500 4 LEU A 26 109.73 -55.65 REMARK 500 4 TYR A 27 173.37 -45.75 REMARK 500 4 VAL A 72 -53.98 -138.37 REMARK 500 4 VAL A 76 155.72 -38.47 REMARK 500 5 MET A 5 -159.26 -124.10 REMARK 500 5 LYS A 21 -116.24 -115.69 REMARK 500 5 ARG A 25 -178.36 175.74 REMARK 500 5 ASP A 28 -176.57 -68.96 REMARK 500 5 VAL A 72 -56.49 -152.46 REMARK 500 5 VAL A 76 150.70 -39.82 REMARK 500 5 GLU A 109 -101.03 -130.14 REMARK 500 6 LYS A 21 -114.68 -118.77 REMARK 500 6 ARG A 25 121.43 158.91 REMARK 500 6 LEU A 26 133.00 -39.04 REMARK 500 6 ASP A 28 -168.10 -101.19 REMARK 500 6 GLU A 43 40.19 39.14 REMARK 500 6 VAL A 72 -58.20 -137.30 REMARK 500 6 GLU A 109 -104.85 -146.67 REMARK 500 7 LYS A 21 -115.23 -126.15 REMARK 500 7 ARG A 25 101.14 175.88 REMARK 500 7 LEU A 26 141.41 -38.56 REMARK 500 7 VAL A 72 -58.78 -137.33 REMARK 500 7 VAL A 76 146.72 -38.81 REMARK 500 7 GLU A 109 -96.60 -69.40 REMARK 500 8 LYS A 21 -103.23 -126.23 REMARK 500 8 ARG A 25 110.09 170.27 REMARK 500 8 LEU A 26 135.84 -38.78 REMARK 500 8 VAL A 72 -46.44 -134.93 REMARK 500 8 VAL A 76 152.95 -39.51 REMARK 500 REMARK 500 THIS ENTRY HAS 137 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6045 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFTS AND STRUCTURAL CONSTRAINTS REMARK 900 RELATED ID: PFR13 RELATED DB: TARGETDB DBREF 1S04 A 1 110 UNP Q8U3L1 Q8U3L1_PYRFU 1 110 SEQRES 1 A 110 MET GLU TRP GLU MET GLY LEU GLN GLU GLU PHE LEU GLU SEQRES 2 A 110 LEU ILE LYS LEU ARG LYS LYS LYS ILE GLU GLY ARG LEU SEQRES 3 A 110 TYR ASP GLU LYS ARG ARG GLN ILE LYS PRO GLY ASP VAL SEQRES 4 A 110 ILE SER PHE GLU GLY GLY LYS LEU LYS VAL ARG VAL LYS SEQRES 5 A 110 ALA ILE ARG VAL TYR ASN SER PHE ARG GLU MET LEU GLU SEQRES 6 A 110 LYS GLU GLY LEU GLU ASN VAL LEU PRO GLY VAL LYS SER SEQRES 7 A 110 ILE GLU GLU GLY ILE GLN VAL TYR ARG ARG PHE TYR ASP SEQRES 8 A 110 GLU GLU LYS GLU LYS LYS TYR GLY VAL VAL ALA ILE GLU SEQRES 9 A 110 ILE GLU PRO LEU GLU TYR HELIX 1 1 GLN A 8 ARG A 18 1 11 HELIX 2 2 ASP A 28 ILE A 34 1 7 HELIX 3 3 SER A 59 GLU A 67 1 9 HELIX 4 4 SER A 78 TYR A 90 1 13 HELIX 5 5 ASP A 91 TYR A 98 1 8 SHEET 1 A 4 TRP A 3 MET A 5 0 SHEET 2 A 4 ILE A 40 PHE A 42 1 O SER A 41 N TRP A 3 SHEET 3 A 4 LEU A 47 ALA A 53 -1 O VAL A 49 N ILE A 40 SHEET 4 A 4 GLU A 104 GLU A 106 -1 O GLU A 104 N ALA A 53 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1