data_1S3K # _entry.id 1S3K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1S3K pdb_00001s3k 10.2210/pdb1s3k/pdb RCSB RCSB021322 ? ? WWPDB D_1000021322 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-01-01 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-10-25 7 'Structure model' 2 2 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Atomic model' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Refinement description' 14 6 'Structure model' 'Structure summary' 15 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity_src_gen 3 4 'Structure model' struct_conn 4 5 'Structure model' atom_site 5 5 'Structure model' chem_comp 6 5 'Structure model' entity 7 5 'Structure model' entity_name_com 8 5 'Structure model' pdbx_branch_scheme 9 5 'Structure model' pdbx_chem_comp_identifier 10 5 'Structure model' pdbx_entity_branch 11 5 'Structure model' pdbx_entity_branch_descriptor 12 5 'Structure model' pdbx_entity_branch_link 13 5 'Structure model' pdbx_entity_branch_list 14 5 'Structure model' pdbx_entity_nonpoly 15 5 'Structure model' pdbx_molecule_features 16 5 'Structure model' pdbx_nonpoly_scheme 17 5 'Structure model' pdbx_struct_assembly_gen 18 5 'Structure model' struct_asym 19 5 'Structure model' struct_conn 20 5 'Structure model' struct_site 21 5 'Structure model' struct_site_gen 22 6 'Structure model' chem_comp 23 6 'Structure model' chem_comp_atom 24 6 'Structure model' chem_comp_bond 25 6 'Structure model' database_2 26 6 'Structure model' pdbx_initial_refinement_model 27 7 'Structure model' pdbx_entry_details 28 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.type' 2 4 'Structure model' '_entity_src_gen.gene_src_common_name' 3 4 'Structure model' '_entity_src_gen.pdbx_description' 4 4 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 5 4 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_atom_site.B_iso_or_equiv' 8 5 'Structure model' '_atom_site.Cartn_x' 9 5 'Structure model' '_atom_site.Cartn_y' 10 5 'Structure model' '_atom_site.Cartn_z' 11 5 'Structure model' '_atom_site.auth_asym_id' 12 5 'Structure model' '_atom_site.auth_atom_id' 13 5 'Structure model' '_atom_site.auth_comp_id' 14 5 'Structure model' '_atom_site.auth_seq_id' 15 5 'Structure model' '_atom_site.label_asym_id' 16 5 'Structure model' '_atom_site.label_atom_id' 17 5 'Structure model' '_atom_site.label_comp_id' 18 5 'Structure model' '_atom_site.label_entity_id' 19 5 'Structure model' '_atom_site.type_symbol' 20 5 'Structure model' '_chem_comp.name' 21 5 'Structure model' '_chem_comp.type' 22 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 23 5 'Structure model' '_struct_conn.pdbx_dist_value' 24 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 6 'Structure model' '_chem_comp.pdbx_synonyms' 38 6 'Structure model' '_database_2.pdbx_DOI' 39 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1S3K _pdbx_database_status.recvd_initial_deposition_date 2004-01-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ramsland, P.A.' 1 ? 'Farrugia, W.' 2 ? 'Bradford, T.M.' 3 ? 'Hogarth, P.M.' 4 ? 'Scott, A.M.' 5 ? # _citation.id primary _citation.title 'Structural convergence of antibody binding of carbohydrate determinants in lewis y tumor antigens' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 340 _citation.page_first 809 _citation.page_last 818 _citation.year 2004 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15223322 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.05.037 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramsland, P.A.' 1 ? primary 'Farrugia, W.' 2 ? primary 'Bradford, T.M.' 3 ? primary 'Hogarth, P.M.' 4 ? primary 'Scott, A.M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HU3S193 Fab fragment, light chain' 24066.689 1 ? ? ? 'murine complementarity determining regions grafted onto human framework and constant sequences' 2 polymer man 'HU3S193 Fab fragment, heavy chain' 23796.654 1 ? ? ? 'murine complementarity determining regions grafted onto human framework and constant sequences' 3 branched man 'alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose' 675.630 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 346 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Lewis Y antigen, alpha anomer' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIQMTQSPSSLSASVGDRVTITCRSSQRIVHSNGNTYLEWYQQTPGKAPKLLIYKVSNRFSGVPSRFSGSGSGTDFTFTI SSLQPEDIATYYCFQGSHVPFTFGQGTKLQITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;DIQMTQSPSSLSASVGDRVTITCRSSQRIVHSNGNTYLEWYQQTPGKAPKLLIYKVSNRFSGVPSRFSGSGSGTDFTFTI SSLQPEDIATYYCFQGSHVPFTFGQGTKLQITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; L ? 2 'polypeptide(L)' no no ;EVQLVESGGGVVQPGRSLRLSCSTSGFTFSDYYMYWVRQAPGKGLEWVAYMSNVGAITDYPDTVKGRFTISRDNSKNTLF LQMDSLRPEDTGVYFCARGTRDGSWFAYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSW NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ; ;EVQLVESGGGVVQPGRSLRLSCSTSGFTFSDYYMYWVRQAPGKGLEWVAYMSNVGAITDYPDTVKGRFTISRDNSKNTLF LQMDSLRPEDTGVYFCARGTRDGSWFAYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSW NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ; H ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 GLN n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 SER n 1 10 SER n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 VAL n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 THR n 1 21 ILE n 1 22 THR n 1 23 CYS n 1 24 ARG n 1 25 SER n 1 26 SER n 1 27 GLN n 1 28 ARG n 1 29 ILE n 1 30 VAL n 1 31 HIS n 1 32 SER n 1 33 ASN n 1 34 GLY n 1 35 ASN n 1 36 THR n 1 37 TYR n 1 38 LEU n 1 39 GLU n 1 40 TRP n 1 41 TYR n 1 42 GLN n 1 43 GLN n 1 44 THR n 1 45 PRO n 1 46 GLY n 1 47 LYS n 1 48 ALA n 1 49 PRO n 1 50 LYS n 1 51 LEU n 1 52 LEU n 1 53 ILE n 1 54 TYR n 1 55 LYS n 1 56 VAL n 1 57 SER n 1 58 ASN n 1 59 ARG n 1 60 PHE n 1 61 SER n 1 62 GLY n 1 63 VAL n 1 64 PRO n 1 65 SER n 1 66 ARG n 1 67 PHE n 1 68 SER n 1 69 GLY n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 GLY n 1 74 THR n 1 75 ASP n 1 76 PHE n 1 77 THR n 1 78 PHE n 1 79 THR n 1 80 ILE n 1 81 SER n 1 82 SER n 1 83 LEU n 1 84 GLN n 1 85 PRO n 1 86 GLU n 1 87 ASP n 1 88 ILE n 1 89 ALA n 1 90 THR n 1 91 TYR n 1 92 TYR n 1 93 CYS n 1 94 PHE n 1 95 GLN n 1 96 GLY n 1 97 SER n 1 98 HIS n 1 99 VAL n 1 100 PRO n 1 101 PHE n 1 102 THR n 1 103 PHE n 1 104 GLY n 1 105 GLN n 1 106 GLY n 1 107 THR n 1 108 LYS n 1 109 LEU n 1 110 GLN n 1 111 ILE n 1 112 THR n 1 113 ARG n 1 114 THR n 1 115 VAL n 1 116 ALA n 1 117 ALA n 1 118 PRO n 1 119 SER n 1 120 VAL n 1 121 PHE n 1 122 ILE n 1 123 PHE n 1 124 PRO n 1 125 PRO n 1 126 SER n 1 127 ASP n 1 128 GLU n 1 129 GLN n 1 130 LEU n 1 131 LYS n 1 132 SER n 1 133 GLY n 1 134 THR n 1 135 ALA n 1 136 SER n 1 137 VAL n 1 138 VAL n 1 139 CYS n 1 140 LEU n 1 141 LEU n 1 142 ASN n 1 143 ASN n 1 144 PHE n 1 145 TYR n 1 146 PRO n 1 147 ARG n 1 148 GLU n 1 149 ALA n 1 150 LYS n 1 151 VAL n 1 152 GLN n 1 153 TRP n 1 154 LYS n 1 155 VAL n 1 156 ASP n 1 157 ASN n 1 158 ALA n 1 159 LEU n 1 160 GLN n 1 161 SER n 1 162 GLY n 1 163 ASN n 1 164 SER n 1 165 GLN n 1 166 GLU n 1 167 SER n 1 168 VAL n 1 169 THR n 1 170 GLU n 1 171 GLN n 1 172 ASP n 1 173 SER n 1 174 LYS n 1 175 ASP n 1 176 SER n 1 177 THR n 1 178 TYR n 1 179 SER n 1 180 LEU n 1 181 SER n 1 182 SER n 1 183 THR n 1 184 LEU n 1 185 THR n 1 186 LEU n 1 187 SER n 1 188 LYS n 1 189 ALA n 1 190 ASP n 1 191 TYR n 1 192 GLU n 1 193 LYS n 1 194 HIS n 1 195 LYS n 1 196 VAL n 1 197 TYR n 1 198 ALA n 1 199 CYS n 1 200 GLU n 1 201 VAL n 1 202 THR n 1 203 HIS n 1 204 GLN n 1 205 GLY n 1 206 LEU n 1 207 SER n 1 208 SER n 1 209 PRO n 1 210 VAL n 1 211 THR n 1 212 LYS n 1 213 SER n 1 214 PHE n 1 215 ASN n 1 216 ARG n 1 217 GLY n 1 218 GLU n 1 219 CYS n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 VAL n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 ARG n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 SER n 2 24 THR n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 THR n 2 29 PHE n 2 30 SER n 2 31 ASP n 2 32 TYR n 2 33 TYR n 2 34 MET n 2 35 TYR n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 TYR n 2 51 MET n 2 52 SER n 2 53 ASN n 2 54 VAL n 2 55 GLY n 2 56 ALA n 2 57 ILE n 2 58 THR n 2 59 ASP n 2 60 TYR n 2 61 PRO n 2 62 ASP n 2 63 THR n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASN n 2 75 SER n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 LEU n 2 80 PHE n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASP n 2 85 SER n 2 86 LEU n 2 87 ARG n 2 88 PRO n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 GLY n 2 93 VAL n 2 94 TYR n 2 95 PHE n 2 96 CYS n 2 97 ALA n 2 98 ARG n 2 99 GLY n 2 100 THR n 2 101 ARG n 2 102 ASP n 2 103 GLY n 2 104 SER n 2 105 TRP n 2 106 PHE n 2 107 ALA n 2 108 TYR n 2 109 TRP n 2 110 GLY n 2 111 GLN n 2 112 GLY n 2 113 THR n 2 114 PRO n 2 115 VAL n 2 116 THR n 2 117 VAL n 2 118 SER n 2 119 SER n 2 120 ALA n 2 121 SER n 2 122 THR n 2 123 LYS n 2 124 GLY n 2 125 PRO n 2 126 SER n 2 127 VAL n 2 128 PHE n 2 129 PRO n 2 130 LEU n 2 131 ALA n 2 132 PRO n 2 133 SER n 2 134 SER n 2 135 LYS n 2 136 SER n 2 137 THR n 2 138 SER n 2 139 GLY n 2 140 GLY n 2 141 THR n 2 142 ALA n 2 143 ALA n 2 144 LEU n 2 145 GLY n 2 146 CYS n 2 147 LEU n 2 148 VAL n 2 149 LYS n 2 150 ASP n 2 151 TYR n 2 152 PHE n 2 153 PRO n 2 154 GLN n 2 155 PRO n 2 156 VAL n 2 157 THR n 2 158 VAL n 2 159 SER n 2 160 TRP n 2 161 ASN n 2 162 SER n 2 163 GLY n 2 164 ALA n 2 165 LEU n 2 166 THR n 2 167 SER n 2 168 GLY n 2 169 VAL n 2 170 HIS n 2 171 THR n 2 172 PHE n 2 173 PRO n 2 174 ALA n 2 175 VAL n 2 176 LEU n 2 177 GLN n 2 178 SER n 2 179 SER n 2 180 GLY n 2 181 LEU n 2 182 TYR n 2 183 SER n 2 184 LEU n 2 185 SER n 2 186 SER n 2 187 VAL n 2 188 VAL n 2 189 THR n 2 190 VAL n 2 191 PRO n 2 192 SER n 2 193 SER n 2 194 SER n 2 195 LEU n 2 196 GLY n 2 197 THR n 2 198 GLN n 2 199 THR n 2 200 TYR n 2 201 ILE n 2 202 CYS n 2 203 ASN n 2 204 VAL n 2 205 ASN n 2 206 HIS n 2 207 LYS n 2 208 PRO n 2 209 SER n 2 210 ASN n 2 211 THR n 2 212 LYS n 2 213 VAL n 2 214 ASP n 2 215 LYS n 2 216 LYS n 2 217 VAL n 2 218 GLU n 2 219 PRO n 2 220 LYS n 2 221 SER n 2 222 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' 'Homo, Mus' ? , , ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? 'house mouse' 'Mus musculus' 10090 Mus ? ? ? ? ? ? ? ? ? ? 'NS0 murine myeloma cells' ? ? ? ? ? ? ? ? Humanized 2 1 sample ? ? ? 'house mouse' 'Mus, Homo' ? , , ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? 'house mouse' 'Mus musculus' 10090 Mus ? ? ? ? ? ? ? ? ? ? 'NS0 murine myeloma cells' ? ? ? ? ? ? ? ? Humanized # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'LFucpa1-2DGalpb1-4[LFucpa1-3]DGlcpNAca1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,4,3/[a2122h-1a_1-5_2*NCC/3=O][a1221m-1a_1-5][a2112h-1b_1-5]/1-2-3-2/a3-b1_a4-c1_c2-d1' WURCS PDB2Glycan 1.1.0 3 3 '[][a-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 GAL C1 O1 1 NDG O4 HO4 sing ? 2 3 3 FUC C1 O1 2 GAL O2 HO2 sing ? 3 3 4 FUC C1 O1 1 NDG O3 HO3 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 GLN 3 3 3 GLN GLN L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 SER 9 9 9 SER SER L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 ALA 13 13 13 ALA ALA L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 VAL 15 15 15 VAL VAL L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 ARG 18 18 18 ARG ARG L . n A 1 19 VAL 19 19 19 VAL VAL L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 THR 22 22 22 THR THR L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 SER 25 25 25 SER SER L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 ARG 28 28 28 ARG ARG L . n A 1 29 ILE 29 29 29 ILE ILE L . n A 1 30 VAL 30 30 30 VAL VAL L . n A 1 31 HIS 31 31 31 HIS HIS L . n A 1 32 SER 32 32 32 SER SER L . n A 1 33 ASN 33 33 33 ASN ASN L . n A 1 34 GLY 34 34 34 GLY GLY L . n A 1 35 ASN 35 35 35 ASN ASN L . n A 1 36 THR 36 36 36 THR THR L . n A 1 37 TYR 37 37 37 TYR TYR L . n A 1 38 LEU 38 38 38 LEU LEU L . n A 1 39 GLU 39 39 39 GLU GLU L . n A 1 40 TRP 40 40 40 TRP TRP L . n A 1 41 TYR 41 41 41 TYR TYR L . n A 1 42 GLN 42 42 42 GLN GLN L . n A 1 43 GLN 43 43 43 GLN GLN L . n A 1 44 THR 44 44 44 THR THR L . n A 1 45 PRO 45 45 45 PRO PRO L . n A 1 46 GLY 46 46 46 GLY GLY L . n A 1 47 LYS 47 47 47 LYS LYS L . n A 1 48 ALA 48 48 48 ALA ALA L . n A 1 49 PRO 49 49 49 PRO PRO L . n A 1 50 LYS 50 50 50 LYS LYS L . n A 1 51 LEU 51 51 51 LEU LEU L . n A 1 52 LEU 52 52 52 LEU LEU L . n A 1 53 ILE 53 53 53 ILE ILE L . n A 1 54 TYR 54 54 54 TYR TYR L . n A 1 55 LYS 55 55 55 LYS LYS L . n A 1 56 VAL 56 56 56 VAL VAL L . n A 1 57 SER 57 57 57 SER SER L . n A 1 58 ASN 58 58 58 ASN ASN L . n A 1 59 ARG 59 59 59 ARG ARG L . n A 1 60 PHE 60 60 60 PHE PHE L . n A 1 61 SER 61 61 61 SER SER L . n A 1 62 GLY 62 62 62 GLY GLY L . n A 1 63 VAL 63 63 63 VAL VAL L . n A 1 64 PRO 64 64 64 PRO PRO L . n A 1 65 SER 65 65 65 SER SER L . n A 1 66 ARG 66 66 66 ARG ARG L . n A 1 67 PHE 67 67 67 PHE PHE L . n A 1 68 SER 68 68 68 SER SER L . n A 1 69 GLY 69 69 69 GLY GLY L . n A 1 70 SER 70 70 70 SER SER L . n A 1 71 GLY 71 71 71 GLY GLY L . n A 1 72 SER 72 72 72 SER SER L . n A 1 73 GLY 73 73 73 GLY GLY L . n A 1 74 THR 74 74 74 THR THR L . n A 1 75 ASP 75 75 75 ASP ASP L . n A 1 76 PHE 76 76 76 PHE PHE L . n A 1 77 THR 77 77 77 THR THR L . n A 1 78 PHE 78 78 78 PHE PHE L . n A 1 79 THR 79 79 79 THR THR L . n A 1 80 ILE 80 80 80 ILE ILE L . n A 1 81 SER 81 81 81 SER SER L . n A 1 82 SER 82 82 82 SER SER L . n A 1 83 LEU 83 83 83 LEU LEU L . n A 1 84 GLN 84 84 84 GLN GLN L . n A 1 85 PRO 85 85 85 PRO PRO L . n A 1 86 GLU 86 86 86 GLU GLU L . n A 1 87 ASP 87 87 87 ASP ASP L . n A 1 88 ILE 88 88 88 ILE ILE L . n A 1 89 ALA 89 89 89 ALA ALA L . n A 1 90 THR 90 90 90 THR THR L . n A 1 91 TYR 91 91 91 TYR TYR L . n A 1 92 TYR 92 92 92 TYR TYR L . n A 1 93 CYS 93 93 93 CYS CYS L . n A 1 94 PHE 94 94 94 PHE PHE L . n A 1 95 GLN 95 95 95 GLN GLN L . n A 1 96 GLY 96 96 96 GLY GLY L . n A 1 97 SER 97 97 97 SER SER L . n A 1 98 HIS 98 98 98 HIS HIS L . n A 1 99 VAL 99 99 99 VAL VAL L . n A 1 100 PRO 100 100 100 PRO PRO L . n A 1 101 PHE 101 101 101 PHE PHE L . n A 1 102 THR 102 102 102 THR THR L . n A 1 103 PHE 103 103 103 PHE PHE L . n A 1 104 GLY 104 104 104 GLY GLY L . n A 1 105 GLN 105 105 105 GLN GLN L . n A 1 106 GLY 106 106 106 GLY GLY L . n A 1 107 THR 107 107 107 THR THR L . n A 1 108 LYS 108 108 108 LYS LYS L . n A 1 109 LEU 109 109 109 LEU LEU L . n A 1 110 GLN 110 110 110 GLN GLN L . n A 1 111 ILE 111 111 111 ILE ILE L . n A 1 112 THR 112 112 112 THR THR L . n A 1 113 ARG 113 113 113 ARG ARG L . n A 1 114 THR 114 114 114 THR THR L . n A 1 115 VAL 115 115 115 VAL VAL L . n A 1 116 ALA 116 116 116 ALA ALA L . n A 1 117 ALA 117 117 117 ALA ALA L . n A 1 118 PRO 118 118 118 PRO PRO L . n A 1 119 SER 119 119 119 SER SER L . n A 1 120 VAL 120 120 120 VAL VAL L . n A 1 121 PHE 121 121 121 PHE PHE L . n A 1 122 ILE 122 122 122 ILE ILE L . n A 1 123 PHE 123 123 123 PHE PHE L . n A 1 124 PRO 124 124 124 PRO PRO L . n A 1 125 PRO 125 125 125 PRO PRO L . n A 1 126 SER 126 126 126 SER SER L . n A 1 127 ASP 127 127 127 ASP ASP L . n A 1 128 GLU 128 128 128 GLU GLU L . n A 1 129 GLN 129 129 129 GLN GLN L . n A 1 130 LEU 130 130 130 LEU LEU L . n A 1 131 LYS 131 131 131 LYS LYS L . n A 1 132 SER 132 132 132 SER SER L . n A 1 133 GLY 133 133 133 GLY GLY L . n A 1 134 THR 134 134 134 THR THR L . n A 1 135 ALA 135 135 135 ALA ALA L . n A 1 136 SER 136 136 136 SER SER L . n A 1 137 VAL 137 137 137 VAL VAL L . n A 1 138 VAL 138 138 138 VAL VAL L . n A 1 139 CYS 139 139 139 CYS CYS L . n A 1 140 LEU 140 140 140 LEU LEU L . n A 1 141 LEU 141 141 141 LEU LEU L . n A 1 142 ASN 142 142 142 ASN ASN L . n A 1 143 ASN 143 143 143 ASN ASN L . n A 1 144 PHE 144 144 144 PHE PHE L . n A 1 145 TYR 145 145 145 TYR TYR L . n A 1 146 PRO 146 146 146 PRO PRO L . n A 1 147 ARG 147 147 147 ARG ARG L . n A 1 148 GLU 148 148 148 GLU GLU L . n A 1 149 ALA 149 149 149 ALA ALA L . n A 1 150 LYS 150 150 150 LYS LYS L . n A 1 151 VAL 151 151 151 VAL VAL L . n A 1 152 GLN 152 152 152 GLN GLN L . n A 1 153 TRP 153 153 153 TRP TRP L . n A 1 154 LYS 154 154 154 LYS LYS L . n A 1 155 VAL 155 155 155 VAL VAL L . n A 1 156 ASP 156 156 156 ASP ASP L . n A 1 157 ASN 157 157 157 ASN ASN L . n A 1 158 ALA 158 158 158 ALA ALA L . n A 1 159 LEU 159 159 159 LEU LEU L . n A 1 160 GLN 160 160 160 GLN GLN L . n A 1 161 SER 161 161 161 SER SER L . n A 1 162 GLY 162 162 162 GLY GLY L . n A 1 163 ASN 163 163 163 ASN ASN L . n A 1 164 SER 164 164 164 SER SER L . n A 1 165 GLN 165 165 165 GLN GLN L . n A 1 166 GLU 166 166 166 GLU GLU L . n A 1 167 SER 167 167 167 SER SER L . n A 1 168 VAL 168 168 168 VAL VAL L . n A 1 169 THR 169 169 169 THR THR L . n A 1 170 GLU 170 170 170 GLU GLU L . n A 1 171 GLN 171 171 171 GLN GLN L . n A 1 172 ASP 172 172 172 ASP ASP L . n A 1 173 SER 173 173 173 SER SER L . n A 1 174 LYS 174 174 174 LYS LYS L . n A 1 175 ASP 175 175 175 ASP ASP L . n A 1 176 SER 176 176 176 SER SER L . n A 1 177 THR 177 177 177 THR THR L . n A 1 178 TYR 178 178 178 TYR TYR L . n A 1 179 SER 179 179 179 SER SER L . n A 1 180 LEU 180 180 180 LEU LEU L . n A 1 181 SER 181 181 181 SER SER L . n A 1 182 SER 182 182 182 SER SER L . n A 1 183 THR 183 183 183 THR THR L . n A 1 184 LEU 184 184 184 LEU LEU L . n A 1 185 THR 185 185 185 THR THR L . n A 1 186 LEU 186 186 186 LEU LEU L . n A 1 187 SER 187 187 187 SER SER L . n A 1 188 LYS 188 188 188 LYS LYS L . n A 1 189 ALA 189 189 189 ALA ALA L . n A 1 190 ASP 190 190 190 ASP ASP L . n A 1 191 TYR 191 191 191 TYR TYR L . n A 1 192 GLU 192 192 192 GLU GLU L . n A 1 193 LYS 193 193 193 LYS LYS L . n A 1 194 HIS 194 194 194 HIS HIS L . n A 1 195 LYS 195 195 195 LYS LYS L . n A 1 196 VAL 196 196 196 VAL VAL L . n A 1 197 TYR 197 197 197 TYR TYR L . n A 1 198 ALA 198 198 198 ALA ALA L . n A 1 199 CYS 199 199 199 CYS CYS L . n A 1 200 GLU 200 200 200 GLU GLU L . n A 1 201 VAL 201 201 201 VAL VAL L . n A 1 202 THR 202 202 202 THR THR L . n A 1 203 HIS 203 203 203 HIS HIS L . n A 1 204 GLN 204 204 204 GLN GLN L . n A 1 205 GLY 205 205 205 GLY GLY L . n A 1 206 LEU 206 206 206 LEU LEU L . n A 1 207 SER 207 207 207 SER SER L . n A 1 208 SER 208 208 208 SER SER L . n A 1 209 PRO 209 209 209 PRO PRO L . n A 1 210 VAL 210 210 210 VAL VAL L . n A 1 211 THR 211 211 211 THR THR L . n A 1 212 LYS 212 212 212 LYS LYS L . n A 1 213 SER 213 213 213 SER SER L . n A 1 214 PHE 214 214 214 PHE PHE L . n A 1 215 ASN 215 215 215 ASN ASN L . n A 1 216 ARG 216 216 216 ARG ARG L . n A 1 217 GLY 217 217 ? ? ? L . n A 1 218 GLU 218 218 ? ? ? L . n A 1 219 CYS 219 219 ? ? ? L . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLU 6 6 6 GLU GLU H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 GLY 9 9 9 GLY GLY H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 VAL 11 11 11 VAL VAL H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 GLN 13 13 13 GLN GLN H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ARG 16 16 16 ARG ARG H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 LEU 18 18 18 LEU LEU H . n B 2 19 ARG 19 19 19 ARG ARG H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 SER 23 23 23 SER SER H . n B 2 24 THR 24 24 24 THR THR H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 PHE 27 27 27 PHE PHE H . n B 2 28 THR 28 28 28 THR THR H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 SER 30 30 30 SER SER H . n B 2 31 ASP 31 31 31 ASP ASP H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 TYR 33 33 33 TYR TYR H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 TYR 35 35 35 TYR TYR H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 LYS 43 43 43 LYS LYS H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 VAL 48 48 48 VAL VAL H . n B 2 49 ALA 49 49 49 ALA ALA H . n B 2 50 TYR 50 50 50 TYR TYR H . n B 2 51 MET 51 51 51 MET MET H . n B 2 52 SER 52 52 52 SER SER H . n B 2 53 ASN 53 53 53 ASN ASN H . n B 2 54 VAL 54 54 54 VAL VAL H . n B 2 55 GLY 55 55 55 GLY GLY H . n B 2 56 ALA 56 56 56 ALA ALA H . n B 2 57 ILE 57 57 57 ILE ILE H . n B 2 58 THR 58 58 58 THR THR H . n B 2 59 ASP 59 59 59 ASP ASP H . n B 2 60 TYR 60 60 60 TYR TYR H . n B 2 61 PRO 61 61 61 PRO PRO H . n B 2 62 ASP 62 62 62 ASP ASP H . n B 2 63 THR 63 63 63 THR THR H . n B 2 64 VAL 64 64 64 VAL VAL H . n B 2 65 LYS 65 65 65 LYS LYS H . n B 2 66 GLY 66 66 66 GLY GLY H . n B 2 67 ARG 67 67 67 ARG ARG H . n B 2 68 PHE 68 68 68 PHE PHE H . n B 2 69 THR 69 69 69 THR THR H . n B 2 70 ILE 70 70 70 ILE ILE H . n B 2 71 SER 71 71 71 SER SER H . n B 2 72 ARG 72 72 72 ARG ARG H . n B 2 73 ASP 73 73 73 ASP ASP H . n B 2 74 ASN 74 74 74 ASN ASN H . n B 2 75 SER 75 75 75 SER SER H . n B 2 76 LYS 76 76 76 LYS LYS H . n B 2 77 ASN 77 77 77 ASN ASN H . n B 2 78 THR 78 78 78 THR THR H . n B 2 79 LEU 79 79 79 LEU LEU H . n B 2 80 PHE 80 80 80 PHE PHE H . n B 2 81 LEU 81 81 81 LEU LEU H . n B 2 82 GLN 82 82 82 GLN GLN H . n B 2 83 MET 83 83 83 MET MET H . n B 2 84 ASP 84 84 84 ASP ASP H . n B 2 85 SER 85 85 85 SER SER H . n B 2 86 LEU 86 86 86 LEU LEU H . n B 2 87 ARG 87 87 87 ARG ARG H . n B 2 88 PRO 88 88 88 PRO PRO H . n B 2 89 GLU 89 89 89 GLU GLU H . n B 2 90 ASP 90 90 90 ASP ASP H . n B 2 91 THR 91 91 91 THR THR H . n B 2 92 GLY 92 92 92 GLY GLY H . n B 2 93 VAL 93 93 93 VAL VAL H . n B 2 94 TYR 94 94 94 TYR TYR H . n B 2 95 PHE 95 95 95 PHE PHE H . n B 2 96 CYS 96 96 96 CYS CYS H . n B 2 97 ALA 97 97 97 ALA ALA H . n B 2 98 ARG 98 98 98 ARG ARG H . n B 2 99 GLY 99 99 99 GLY GLY H . n B 2 100 THR 100 100 100 THR THR H . n B 2 101 ARG 101 101 101 ARG ARG H . n B 2 102 ASP 102 102 102 ASP ASP H . n B 2 103 GLY 103 103 103 GLY GLY H . n B 2 104 SER 104 104 104 SER SER H . n B 2 105 TRP 105 105 105 TRP TRP H . n B 2 106 PHE 106 106 106 PHE PHE H . n B 2 107 ALA 107 107 107 ALA ALA H . n B 2 108 TYR 108 108 108 TYR TYR H . n B 2 109 TRP 109 109 109 TRP TRP H . n B 2 110 GLY 110 110 110 GLY GLY H . n B 2 111 GLN 111 111 111 GLN GLN H . n B 2 112 GLY 112 112 112 GLY GLY H . n B 2 113 THR 113 113 113 THR THR H . n B 2 114 PRO 114 114 114 PRO PRO H . n B 2 115 VAL 115 115 115 VAL VAL H . n B 2 116 THR 116 116 116 THR THR H . n B 2 117 VAL 117 117 117 VAL VAL H . n B 2 118 SER 118 118 118 SER SER H . n B 2 119 SER 119 119 119 SER SER H . n B 2 120 ALA 120 120 120 ALA ALA H . n B 2 121 SER 121 121 121 SER SER H . n B 2 122 THR 122 122 122 THR THR H . n B 2 123 LYS 123 123 123 LYS LYS H . n B 2 124 GLY 124 124 124 GLY GLY H . n B 2 125 PRO 125 125 125 PRO PRO H . n B 2 126 SER 126 126 126 SER SER H . n B 2 127 VAL 127 127 127 VAL VAL H . n B 2 128 PHE 128 128 128 PHE PHE H . n B 2 129 PRO 129 129 129 PRO PRO H . n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 ALA 131 131 131 ALA ALA H . n B 2 132 PRO 132 132 132 PRO PRO H . n B 2 133 SER 133 133 ? ? ? H . n B 2 134 SER 134 134 ? ? ? H . n B 2 135 LYS 135 135 ? ? ? H . n B 2 136 SER 136 136 ? ? ? H . n B 2 137 THR 137 137 ? ? ? H . n B 2 138 SER 138 138 ? ? ? H . n B 2 139 GLY 139 139 ? ? ? H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 THR 141 141 141 THR THR H . n B 2 142 ALA 142 142 142 ALA ALA H . n B 2 143 ALA 143 143 143 ALA ALA H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 GLY 145 145 145 GLY GLY H . n B 2 146 CYS 146 146 146 CYS CYS H . n B 2 147 LEU 147 147 147 LEU LEU H . n B 2 148 VAL 148 148 148 VAL VAL H . n B 2 149 LYS 149 149 149 LYS LYS H . n B 2 150 ASP 150 150 150 ASP ASP H . n B 2 151 TYR 151 151 151 TYR TYR H . n B 2 152 PHE 152 152 152 PHE PHE H . n B 2 153 PRO 153 153 153 PRO PRO H . n B 2 154 GLN 154 154 154 GLN GLN H . n B 2 155 PRO 155 155 155 PRO PRO H . n B 2 156 VAL 156 156 156 VAL VAL H . n B 2 157 THR 157 157 157 THR THR H . n B 2 158 VAL 158 158 158 VAL VAL H . n B 2 159 SER 159 159 159 SER SER H . n B 2 160 TRP 160 160 160 TRP TRP H . n B 2 161 ASN 161 161 161 ASN ASN H . n B 2 162 SER 162 162 162 SER SER H . n B 2 163 GLY 163 163 163 GLY GLY H . n B 2 164 ALA 164 164 164 ALA ALA H . n B 2 165 LEU 165 165 165 LEU LEU H . n B 2 166 THR 166 166 166 THR THR H . n B 2 167 SER 167 167 167 SER SER H . n B 2 168 GLY 168 168 168 GLY GLY H . n B 2 169 VAL 169 169 169 VAL VAL H . n B 2 170 HIS 170 170 170 HIS HIS H . n B 2 171 THR 171 171 171 THR THR H . n B 2 172 PHE 172 172 172 PHE PHE H . n B 2 173 PRO 173 173 173 PRO PRO H . n B 2 174 ALA 174 174 174 ALA ALA H . n B 2 175 VAL 175 175 175 VAL VAL H . n B 2 176 LEU 176 176 176 LEU LEU H . n B 2 177 GLN 177 177 177 GLN GLN H . n B 2 178 SER 178 178 178 SER SER H . n B 2 179 SER 179 179 179 SER SER H . n B 2 180 GLY 180 180 180 GLY GLY H . n B 2 181 LEU 181 181 181 LEU LEU H . n B 2 182 TYR 182 182 182 TYR TYR H . n B 2 183 SER 183 183 183 SER SER H . n B 2 184 LEU 184 184 184 LEU LEU H . n B 2 185 SER 185 185 185 SER SER H . n B 2 186 SER 186 186 186 SER SER H . n B 2 187 VAL 187 187 187 VAL VAL H . n B 2 188 VAL 188 188 188 VAL VAL H . n B 2 189 THR 189 189 189 THR THR H . n B 2 190 VAL 190 190 190 VAL VAL H . n B 2 191 PRO 191 191 191 PRO PRO H . n B 2 192 SER 192 192 192 SER SER H . n B 2 193 SER 193 193 193 SER SER H . n B 2 194 SER 194 194 194 SER SER H . n B 2 195 LEU 195 195 195 LEU LEU H . n B 2 196 GLY 196 196 196 GLY GLY H . n B 2 197 THR 197 197 197 THR THR H . n B 2 198 GLN 198 198 198 GLN GLN H . n B 2 199 THR 199 199 199 THR THR H . n B 2 200 TYR 200 200 200 TYR TYR H . n B 2 201 ILE 201 201 201 ILE ILE H . n B 2 202 CYS 202 202 202 CYS CYS H . n B 2 203 ASN 203 203 203 ASN ASN H . n B 2 204 VAL 204 204 204 VAL VAL H . n B 2 205 ASN 205 205 205 ASN ASN H . n B 2 206 HIS 206 206 206 HIS HIS H . n B 2 207 LYS 207 207 207 LYS LYS H . n B 2 208 PRO 208 208 208 PRO PRO H . n B 2 209 SER 209 209 209 SER SER H . n B 2 210 ASN 210 210 210 ASN ASN H . n B 2 211 THR 211 211 211 THR THR H . n B 2 212 LYS 212 212 212 LYS LYS H . n B 2 213 VAL 213 213 213 VAL VAL H . n B 2 214 ASP 214 214 214 ASP ASP H . n B 2 215 LYS 215 215 215 LYS LYS H . n B 2 216 LYS 216 216 216 LYS LYS H . n B 2 217 VAL 217 217 217 VAL VAL H . n B 2 218 GLU 218 218 218 GLU GLU H . n B 2 219 PRO 219 219 219 PRO PRO H . n B 2 220 LYS 220 220 ? ? ? H . n B 2 221 SER 221 221 ? ? ? H . n B 2 222 CYS 222 222 ? ? ? H . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NDG 1 A NDG 1 C NAG 3 n C 3 GAL 2 A GAL 2 C GAL 2 n C 3 FUC 3 A FUC 3 C FUC 1 n C 3 FUC 4 A FUC 4 C FUC 4 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL 1 1001 1 GOL GOL L . E 5 HOH 1 1002 3 HOH TIP L . E 5 HOH 2 1003 4 HOH TIP L . E 5 HOH 3 1004 8 HOH TIP L . E 5 HOH 4 1005 10 HOH TIP L . E 5 HOH 5 1006 11 HOH TIP L . E 5 HOH 6 1007 12 HOH TIP L . E 5 HOH 7 1008 14 HOH TIP L . E 5 HOH 8 1009 17 HOH TIP L . E 5 HOH 9 1010 20 HOH TIP L . E 5 HOH 10 1011 21 HOH TIP L . E 5 HOH 11 1012 26 HOH TIP L . E 5 HOH 12 1013 27 HOH TIP L . E 5 HOH 13 1014 28 HOH TIP L . E 5 HOH 14 1015 36 HOH TIP L . E 5 HOH 15 1016 38 HOH TIP L . E 5 HOH 16 1017 39 HOH TIP L . E 5 HOH 17 1018 41 HOH TIP L . E 5 HOH 18 1019 42 HOH TIP L . E 5 HOH 19 1020 43 HOH TIP L . E 5 HOH 20 1021 44 HOH TIP L . E 5 HOH 21 1022 51 HOH TIP L . E 5 HOH 22 1023 53 HOH TIP L . E 5 HOH 23 1024 54 HOH TIP L . E 5 HOH 24 1025 55 HOH TIP L . E 5 HOH 25 1026 58 HOH TIP L . E 5 HOH 26 1027 59 HOH TIP L . E 5 HOH 27 1028 60 HOH TIP L . E 5 HOH 28 1029 62 HOH TIP L . E 5 HOH 29 1030 63 HOH TIP L . E 5 HOH 30 1031 66 HOH TIP L . E 5 HOH 31 1032 67 HOH TIP L . E 5 HOH 32 1033 68 HOH TIP L . E 5 HOH 33 1034 70 HOH TIP L . E 5 HOH 34 1035 75 HOH TIP L . E 5 HOH 35 1036 76 HOH TIP L . E 5 HOH 36 1037 78 HOH TIP L . E 5 HOH 37 1038 80 HOH TIP L . E 5 HOH 38 1039 85 HOH TIP L . E 5 HOH 39 1040 86 HOH TIP L . E 5 HOH 40 1041 87 HOH TIP L . E 5 HOH 41 1042 91 HOH TIP L . E 5 HOH 42 1043 95 HOH TIP L . E 5 HOH 43 1044 99 HOH TIP L . E 5 HOH 44 1045 101 HOH TIP L . E 5 HOH 45 1046 103 HOH TIP L . E 5 HOH 46 1047 104 HOH TIP L . E 5 HOH 47 1048 105 HOH TIP L . E 5 HOH 48 1049 111 HOH TIP L . E 5 HOH 49 1050 120 HOH TIP L . E 5 HOH 50 1051 121 HOH TIP L . E 5 HOH 51 1052 123 HOH TIP L . E 5 HOH 52 1053 124 HOH TIP L . E 5 HOH 53 1054 126 HOH TIP L . E 5 HOH 54 1055 130 HOH TIP L . E 5 HOH 55 1056 131 HOH TIP L . E 5 HOH 56 1057 132 HOH TIP L . E 5 HOH 57 1058 135 HOH TIP L . E 5 HOH 58 1059 136 HOH TIP L . E 5 HOH 59 1060 137 HOH TIP L . E 5 HOH 60 1061 141 HOH TIP L . E 5 HOH 61 1062 145 HOH TIP L . E 5 HOH 62 1063 146 HOH TIP L . E 5 HOH 63 1064 147 HOH TIP L . E 5 HOH 64 1065 149 HOH TIP L . E 5 HOH 65 1066 151 HOH TIP L . E 5 HOH 66 1067 153 HOH TIP L . E 5 HOH 67 1068 155 HOH TIP L . E 5 HOH 68 1069 156 HOH TIP L . E 5 HOH 69 1070 157 HOH TIP L . E 5 HOH 70 1071 158 HOH TIP L . E 5 HOH 71 1072 159 HOH TIP L . E 5 HOH 72 1073 160 HOH TIP L . E 5 HOH 73 1074 163 HOH TIP L . E 5 HOH 74 1075 164 HOH TIP L . E 5 HOH 75 1076 165 HOH TIP L . E 5 HOH 76 1077 166 HOH TIP L . E 5 HOH 77 1078 167 HOH TIP L . E 5 HOH 78 1079 169 HOH TIP L . E 5 HOH 79 1080 171 HOH TIP L . E 5 HOH 80 1081 173 HOH TIP L . E 5 HOH 81 1082 175 HOH TIP L . E 5 HOH 82 1083 177 HOH TIP L . E 5 HOH 83 1084 178 HOH TIP L . E 5 HOH 84 1085 179 HOH TIP L . E 5 HOH 85 1086 182 HOH TIP L . E 5 HOH 86 1087 183 HOH TIP L . E 5 HOH 87 1088 187 HOH TIP L . E 5 HOH 88 1089 188 HOH TIP L . E 5 HOH 89 1090 191 HOH TIP L . E 5 HOH 90 1091 193 HOH TIP L . E 5 HOH 91 1092 195 HOH TIP L . E 5 HOH 92 1093 198 HOH TIP L . E 5 HOH 93 1094 199 HOH TIP L . E 5 HOH 94 1095 203 HOH TIP L . E 5 HOH 95 1096 206 HOH TIP L . E 5 HOH 96 1097 208 HOH TIP L . E 5 HOH 97 1098 209 HOH TIP L . E 5 HOH 98 1099 210 HOH TIP L . E 5 HOH 99 1100 214 HOH TIP L . E 5 HOH 100 1101 217 HOH TIP L . E 5 HOH 101 1102 218 HOH TIP L . E 5 HOH 102 1103 219 HOH TIP L . E 5 HOH 103 1104 220 HOH TIP L . E 5 HOH 104 1105 223 HOH TIP L . E 5 HOH 105 1106 225 HOH TIP L . E 5 HOH 106 1107 226 HOH TIP L . E 5 HOH 107 1108 230 HOH TIP L . E 5 HOH 108 1109 232 HOH TIP L . E 5 HOH 109 1110 235 HOH TIP L . E 5 HOH 110 1111 242 HOH TIP L . E 5 HOH 111 1112 246 HOH TIP L . E 5 HOH 112 1113 250 HOH TIP L . E 5 HOH 113 1114 257 HOH TIP L . E 5 HOH 114 1115 259 HOH TIP L . E 5 HOH 115 1116 260 HOH TIP L . E 5 HOH 116 1117 262 HOH TIP L . E 5 HOH 117 1118 263 HOH TIP L . E 5 HOH 118 1119 267 HOH TIP L . E 5 HOH 119 1120 268 HOH TIP L . E 5 HOH 120 1121 270 HOH TIP L . E 5 HOH 121 1122 271 HOH TIP L . E 5 HOH 122 1123 275 HOH TIP L . E 5 HOH 123 1124 277 HOH TIP L . E 5 HOH 124 1125 280 HOH TIP L . E 5 HOH 125 1126 281 HOH TIP L . E 5 HOH 126 1127 282 HOH TIP L . E 5 HOH 127 1128 283 HOH TIP L . E 5 HOH 128 1129 284 HOH TIP L . E 5 HOH 129 1130 285 HOH TIP L . E 5 HOH 130 1131 286 HOH TIP L . E 5 HOH 131 1132 290 HOH TIP L . E 5 HOH 132 1133 292 HOH TIP L . E 5 HOH 133 1134 294 HOH TIP L . E 5 HOH 134 1135 295 HOH TIP L . E 5 HOH 135 1136 296 HOH TIP L . E 5 HOH 136 1137 297 HOH TIP L . E 5 HOH 137 1138 298 HOH TIP L . E 5 HOH 138 1139 299 HOH TIP L . E 5 HOH 139 1140 300 HOH TIP L . E 5 HOH 140 1141 301 HOH TIP L . E 5 HOH 141 1142 302 HOH TIP L . E 5 HOH 142 1143 303 HOH TIP L . E 5 HOH 143 1144 304 HOH TIP L . E 5 HOH 144 1145 305 HOH TIP L . E 5 HOH 145 1146 306 HOH TIP L . E 5 HOH 146 1147 307 HOH TIP L . E 5 HOH 147 1148 308 HOH TIP L . E 5 HOH 148 1149 309 HOH TIP L . E 5 HOH 149 1150 310 HOH TIP L . E 5 HOH 150 1151 311 HOH TIP L . E 5 HOH 151 1152 312 HOH TIP L . E 5 HOH 152 1153 313 HOH TIP L . E 5 HOH 153 1154 315 HOH TIP L . E 5 HOH 154 1155 317 HOH TIP L . E 5 HOH 155 1156 318 HOH TIP L . E 5 HOH 156 1157 339 HOH TIP L . E 5 HOH 157 1158 340 HOH TIP L . E 5 HOH 158 1159 341 HOH TIP L . E 5 HOH 159 1160 342 HOH TIP L . E 5 HOH 160 1161 344 HOH TIP L . E 5 HOH 161 1162 345 HOH TIP L . F 5 HOH 1 227 1 HOH TIP H . F 5 HOH 2 228 2 HOH TIP H . F 5 HOH 3 229 5 HOH TIP H . F 5 HOH 4 230 6 HOH TIP H . F 5 HOH 5 231 7 HOH TIP H . F 5 HOH 6 232 9 HOH TIP H . F 5 HOH 7 233 13 HOH TIP H . F 5 HOH 8 234 15 HOH TIP H . F 5 HOH 9 235 16 HOH TIP H . F 5 HOH 10 236 18 HOH TIP H . F 5 HOH 11 237 19 HOH TIP H . F 5 HOH 12 238 22 HOH TIP H . F 5 HOH 13 239 23 HOH TIP H . F 5 HOH 14 240 24 HOH TIP H . F 5 HOH 15 241 25 HOH TIP H . F 5 HOH 16 242 29 HOH TIP H . F 5 HOH 17 243 30 HOH TIP H . F 5 HOH 18 244 31 HOH TIP H . F 5 HOH 19 245 32 HOH TIP H . F 5 HOH 20 246 33 HOH TIP H . F 5 HOH 21 247 34 HOH TIP H . F 5 HOH 22 248 35 HOH TIP H . F 5 HOH 23 249 37 HOH TIP H . F 5 HOH 24 250 40 HOH TIP H . F 5 HOH 25 251 45 HOH TIP H . F 5 HOH 26 252 46 HOH TIP H . F 5 HOH 27 253 47 HOH TIP H . F 5 HOH 28 254 48 HOH TIP H . F 5 HOH 29 255 49 HOH TIP H . F 5 HOH 30 256 50 HOH TIP H . F 5 HOH 31 257 52 HOH TIP H . F 5 HOH 32 258 56 HOH TIP H . F 5 HOH 33 259 57 HOH TIP H . F 5 HOH 34 260 61 HOH TIP H . F 5 HOH 35 261 64 HOH TIP H . F 5 HOH 36 262 65 HOH TIP H . F 5 HOH 37 263 69 HOH TIP H . F 5 HOH 38 264 71 HOH TIP H . F 5 HOH 39 265 72 HOH TIP H . F 5 HOH 40 266 73 HOH TIP H . F 5 HOH 41 267 74 HOH TIP H . F 5 HOH 42 268 77 HOH TIP H . F 5 HOH 43 269 79 HOH TIP H . F 5 HOH 44 270 81 HOH TIP H . F 5 HOH 45 271 82 HOH TIP H . F 5 HOH 46 272 83 HOH TIP H . F 5 HOH 47 273 84 HOH TIP H . F 5 HOH 48 274 88 HOH TIP H . F 5 HOH 49 275 89 HOH TIP H . F 5 HOH 50 276 90 HOH TIP H . F 5 HOH 51 277 92 HOH TIP H . F 5 HOH 52 278 93 HOH TIP H . F 5 HOH 53 279 94 HOH TIP H . F 5 HOH 54 280 96 HOH TIP H . F 5 HOH 55 281 97 HOH TIP H . F 5 HOH 56 282 98 HOH TIP H . F 5 HOH 57 283 100 HOH TIP H . F 5 HOH 58 284 102 HOH TIP H . F 5 HOH 59 285 106 HOH TIP H . F 5 HOH 60 286 107 HOH TIP H . F 5 HOH 61 287 108 HOH TIP H . F 5 HOH 62 288 109 HOH TIP H . F 5 HOH 63 289 110 HOH TIP H . F 5 HOH 64 290 112 HOH TIP H . F 5 HOH 65 291 113 HOH TIP H . F 5 HOH 66 292 114 HOH TIP H . F 5 HOH 67 293 115 HOH TIP H . F 5 HOH 68 294 116 HOH TIP H . F 5 HOH 69 295 117 HOH TIP H . F 5 HOH 70 296 118 HOH TIP H . F 5 HOH 71 297 119 HOH TIP H . F 5 HOH 72 298 122 HOH TIP H . F 5 HOH 73 299 125 HOH TIP H . F 5 HOH 74 300 127 HOH TIP H . F 5 HOH 75 301 128 HOH TIP H . F 5 HOH 76 302 129 HOH TIP H . F 5 HOH 77 303 133 HOH TIP H . F 5 HOH 78 304 134 HOH TIP H . F 5 HOH 79 305 138 HOH TIP H . F 5 HOH 80 306 139 HOH TIP H . F 5 HOH 81 307 140 HOH TIP H . F 5 HOH 82 308 142 HOH TIP H . F 5 HOH 83 309 143 HOH TIP H . F 5 HOH 84 310 144 HOH TIP H . F 5 HOH 85 311 148 HOH TIP H . F 5 HOH 86 312 150 HOH TIP H . F 5 HOH 87 313 152 HOH TIP H . F 5 HOH 88 314 154 HOH TIP H . F 5 HOH 89 315 161 HOH TIP H . F 5 HOH 90 316 162 HOH TIP H . F 5 HOH 91 317 168 HOH TIP H . F 5 HOH 92 318 170 HOH TIP H . F 5 HOH 93 319 172 HOH TIP H . F 5 HOH 94 320 174 HOH TIP H . F 5 HOH 95 321 176 HOH TIP H . F 5 HOH 96 322 180 HOH TIP H . F 5 HOH 97 323 181 HOH TIP H . F 5 HOH 98 324 184 HOH TIP H . F 5 HOH 99 325 185 HOH TIP H . F 5 HOH 100 326 186 HOH TIP H . F 5 HOH 101 327 189 HOH TIP H . F 5 HOH 102 328 190 HOH TIP H . F 5 HOH 103 329 192 HOH TIP H . F 5 HOH 104 330 194 HOH TIP H . F 5 HOH 105 331 196 HOH TIP H . F 5 HOH 106 332 197 HOH TIP H . F 5 HOH 107 333 200 HOH TIP H . F 5 HOH 108 334 201 HOH TIP H . F 5 HOH 109 335 202 HOH TIP H . F 5 HOH 110 336 204 HOH TIP H . F 5 HOH 111 337 205 HOH TIP H . F 5 HOH 112 338 207 HOH TIP H . F 5 HOH 113 339 211 HOH TIP H . F 5 HOH 114 340 212 HOH TIP H . F 5 HOH 115 341 213 HOH TIP H . F 5 HOH 116 342 215 HOH TIP H . F 5 HOH 117 343 216 HOH TIP H . F 5 HOH 118 344 221 HOH TIP H . F 5 HOH 119 345 222 HOH TIP H . F 5 HOH 120 346 224 HOH TIP H . F 5 HOH 121 347 227 HOH TIP H . F 5 HOH 122 348 228 HOH TIP H . F 5 HOH 123 349 229 HOH TIP H . F 5 HOH 124 350 231 HOH TIP H . F 5 HOH 125 351 233 HOH TIP H . F 5 HOH 126 352 234 HOH TIP H . F 5 HOH 127 353 236 HOH TIP H . F 5 HOH 128 354 237 HOH TIP H . F 5 HOH 129 355 238 HOH TIP H . F 5 HOH 130 356 239 HOH TIP H . F 5 HOH 131 357 240 HOH TIP H . F 5 HOH 132 358 241 HOH TIP H . F 5 HOH 133 359 243 HOH TIP H . F 5 HOH 134 360 244 HOH TIP H . F 5 HOH 135 361 245 HOH TIP H . F 5 HOH 136 362 247 HOH TIP H . F 5 HOH 137 363 248 HOH TIP H . F 5 HOH 138 364 249 HOH TIP H . F 5 HOH 139 365 251 HOH TIP H . F 5 HOH 140 366 252 HOH TIP H . F 5 HOH 141 367 253 HOH TIP H . F 5 HOH 142 368 254 HOH TIP H . F 5 HOH 143 369 255 HOH TIP H . F 5 HOH 144 370 256 HOH TIP H . F 5 HOH 145 371 258 HOH TIP H . F 5 HOH 146 372 261 HOH TIP H . F 5 HOH 147 373 264 HOH TIP H . F 5 HOH 148 374 265 HOH TIP H . F 5 HOH 149 375 266 HOH TIP H . F 5 HOH 150 376 269 HOH TIP H . F 5 HOH 151 377 272 HOH TIP H . F 5 HOH 152 378 273 HOH TIP H . F 5 HOH 153 379 274 HOH TIP H . F 5 HOH 154 380 276 HOH TIP H . F 5 HOH 155 381 278 HOH TIP H . F 5 HOH 156 382 279 HOH TIP H . F 5 HOH 157 383 287 HOH TIP H . F 5 HOH 158 384 288 HOH TIP H . F 5 HOH 159 385 289 HOH TIP H . F 5 HOH 160 386 291 HOH TIP H . F 5 HOH 161 387 293 HOH TIP H . F 5 HOH 162 388 314 HOH TIP H . F 5 HOH 163 389 316 HOH TIP H . F 5 HOH 164 390 319 HOH TIP H . F 5 HOH 165 391 320 HOH TIP H . F 5 HOH 166 392 321 HOH TIP H . F 5 HOH 167 393 322 HOH TIP H . F 5 HOH 168 394 323 HOH TIP H . F 5 HOH 169 395 324 HOH TIP H . F 5 HOH 170 396 325 HOH TIP H . F 5 HOH 171 397 326 HOH TIP H . F 5 HOH 172 398 327 HOH TIP H . F 5 HOH 173 399 328 HOH TIP H . F 5 HOH 174 400 329 HOH TIP H . F 5 HOH 175 401 330 HOH TIP H . F 5 HOH 176 402 331 HOH TIP H . F 5 HOH 177 403 332 HOH TIP H . F 5 HOH 178 404 333 HOH TIP H . F 5 HOH 179 405 334 HOH TIP H . F 5 HOH 180 406 335 HOH TIP H . F 5 HOH 181 407 336 HOH TIP H . F 5 HOH 182 408 337 HOH TIP H . F 5 HOH 183 409 338 HOH TIP H . F 5 HOH 184 410 343 HOH TIP H . F 5 HOH 185 411 346 HOH TIP H . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 # _cell.entry_id 1S3K _cell.length_a 71.758 _cell.length_b 71.758 _cell.length_c 90.142 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S3K _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 # _exptl.entry_id 1S3K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_percent_sol 52.35 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 20000, sodium chloride, Tris, MES, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-08-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.900 # _reflns.entry_id 1S3K _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 50.0 _reflns.number_all 39562 _reflns.number_obs 39562 _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI 15.2 _reflns.B_iso_Wilson_estimate 12.7 _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 73.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.153 _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3008 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1S3K _refine.ls_d_res_high 1.90 _refine.ls_d_res_low 33.34 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 38945 _refine.ls_number_reflns_obs 38945 _refine.ls_number_reflns_R_free 1950 _refine.ls_percent_reflns_obs 95.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.203 _refine.ls_R_factor_R_work 0.203 _refine.ls_R_factor_R_free 0.238 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1CLY' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 27.6 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1S3K _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.18 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3281 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 346 _refine_hist.number_atoms_total 3679 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 33.34 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 27.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.78 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1S3K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1S3K _struct.title 'Crystal Structure of a Humanized Fab (hu3S193) in Complex with the Lewis Y Tetrasaccharide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1S3K _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'Immunoglobulin fold, Beta Barrel, Humanized antibody, Antigen binding fragment, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1S3K 1S3K ? ? ? 2 2 PDB 1S3K 1S3K ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1S3K L 1 ? 219 ? 1S3K 1 ? 219 ? 1 219 2 2 1S3K H 1 ? 222 ? 1S3K 1 ? 222 ? 1 222 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5000 ? 1 MORE -9 ? 1 'SSA (A^2)' 18620 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 84 ? ILE A 88 ? GLN L 84 ILE L 88 5 ? 5 HELX_P HELX_P2 2 SER A 126 ? LYS A 131 ? SER L 126 LYS L 131 1 ? 6 HELX_P HELX_P3 3 LYS A 188 ? GLU A 192 ? LYS L 188 GLU L 192 1 ? 5 HELX_P HELX_P4 4 THR B 28 ? TYR B 32 ? THR H 28 TYR H 32 5 ? 5 HELX_P HELX_P5 5 ASN B 74 ? LYS B 76 ? ASN H 74 LYS H 76 5 ? 3 HELX_P HELX_P6 6 ARG B 87 ? THR B 91 ? ARG H 87 THR H 91 5 ? 5 HELX_P HELX_P7 7 SER B 162 ? ALA B 164 ? SER H 162 ALA H 164 5 ? 3 HELX_P HELX_P8 8 SER B 193 ? LEU B 195 ? SER H 193 LEU H 195 5 ? 3 HELX_P HELX_P9 9 LYS B 207 ? ASN B 210 ? LYS H 207 ASN H 210 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? L CYS 23 L CYS 93 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 199 SG ? ? L CYS 139 L CYS 199 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf4 disulf ? ? B CYS 146 SG ? ? ? 1_555 B CYS 202 SG ? ? H CYS 146 H CYS 202 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale both ? C NDG . O4 ? ? ? 1_555 C GAL . C1 ? ? A NDG 1 A GAL 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale2 covale both ? C NDG . O3 ? ? ? 1_555 C FUC . C1 ? ? A NDG 1 A FUC 4 1_555 ? ? ? ? ? ? ? 1.401 ? ? covale3 covale both ? C GAL . O2 ? ? ? 1_555 C FUC . C1 ? ? A GAL 2 A FUC 3 1_555 ? ? ? ? ? ? ? 1.403 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 23 ? CYS A 93 ? CYS L 23 ? 1_555 CYS L 93 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 139 ? CYS A 199 ? CYS L 139 ? 1_555 CYS L 199 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 22 ? CYS B 96 ? CYS H 22 ? 1_555 CYS H 96 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 146 ? CYS B 202 ? CYS H 146 ? 1_555 CYS H 202 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 -0.33 2 VAL 99 A . ? VAL 99 L PRO 100 A ? PRO 100 L 1 -0.13 3 TYR 145 A . ? TYR 145 L PRO 146 A ? PRO 146 L 1 0.22 4 PHE 152 B . ? PHE 152 H PRO 153 B ? PRO 153 H 1 -0.02 5 GLN 154 B . ? GLN 154 H PRO 155 B ? PRO 155 H 1 0.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 6 ? H ? 4 ? I ? 4 ? J ? 4 ? K ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? SER A 7 ? MET L 4 SER L 7 A 2 VAL A 19 ? SER A 25 ? VAL L 19 SER L 25 A 3 ASP A 75 ? ILE A 80 ? ASP L 75 ILE L 80 A 4 PHE A 67 ? SER A 72 ? PHE L 67 SER L 72 B 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14 B 2 THR A 107 ? THR A 112 ? THR L 107 THR L 112 B 3 ALA A 89 ? GLN A 95 ? ALA L 89 GLN L 95 B 4 LEU A 38 ? GLN A 43 ? LEU L 38 GLN L 43 B 5 LYS A 50 ? TYR A 54 ? LYS L 50 TYR L 54 B 6 ASN A 58 ? ARG A 59 ? ASN L 58 ARG L 59 C 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14 C 2 THR A 107 ? THR A 112 ? THR L 107 THR L 112 C 3 ALA A 89 ? GLN A 95 ? ALA L 89 GLN L 95 C 4 THR A 102 ? PHE A 103 ? THR L 102 PHE L 103 D 1 SER A 119 ? PHE A 123 ? SER L 119 PHE L 123 D 2 THR A 134 ? PHE A 144 ? THR L 134 PHE L 144 D 3 TYR A 178 ? SER A 187 ? TYR L 178 SER L 187 D 4 SER A 164 ? VAL A 168 ? SER L 164 VAL L 168 E 1 ALA A 158 ? LEU A 159 ? ALA L 158 LEU L 159 E 2 LYS A 150 ? VAL A 155 ? LYS L 150 VAL L 155 E 3 VAL A 196 ? THR A 202 ? VAL L 196 THR L 202 E 4 VAL A 210 ? ASN A 215 ? VAL L 210 ASN L 215 F 1 GLN B 3 ? SER B 7 ? GLN H 3 SER H 7 F 2 LEU B 18 ? SER B 25 ? LEU H 18 SER H 25 F 3 THR B 78 ? MET B 83 ? THR H 78 MET H 83 F 4 PHE B 68 ? ASP B 73 ? PHE H 68 ASP H 73 G 1 VAL B 11 ? VAL B 12 ? VAL H 11 VAL H 12 G 2 THR B 113 ? VAL B 117 ? THR H 113 VAL H 117 G 3 GLY B 92 ? THR B 100 ? GLY H 92 THR H 100 G 4 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 G 5 LEU B 45 ? MET B 51 ? LEU H 45 MET H 51 G 6 THR B 58 ? ASP B 59 ? THR H 58 ASP H 59 H 1 VAL B 11 ? VAL B 12 ? VAL H 11 VAL H 12 H 2 THR B 113 ? VAL B 117 ? THR H 113 VAL H 117 H 3 GLY B 92 ? THR B 100 ? GLY H 92 THR H 100 H 4 SER B 104 ? TRP B 109 ? SER H 104 TRP H 109 I 1 SER B 126 ? LEU B 130 ? SER H 126 LEU H 130 I 2 THR B 141 ? TYR B 151 ? THR H 141 TYR H 151 I 3 TYR B 182 ? PRO B 191 ? TYR H 182 PRO H 191 I 4 VAL B 169 ? THR B 171 ? VAL H 169 THR H 171 J 1 SER B 126 ? LEU B 130 ? SER H 126 LEU H 130 J 2 THR B 141 ? TYR B 151 ? THR H 141 TYR H 151 J 3 TYR B 182 ? PRO B 191 ? TYR H 182 PRO H 191 J 4 VAL B 175 ? LEU B 176 ? VAL H 175 LEU H 176 K 1 THR B 157 ? TRP B 160 ? THR H 157 TRP H 160 K 2 TYR B 200 ? HIS B 206 ? TYR H 200 HIS H 206 K 3 THR B 211 ? VAL B 217 ? THR H 211 VAL H 217 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 7 ? N SER L 7 O THR A 22 ? O THR L 22 A 2 3 N ILE A 21 ? N ILE L 21 O PHE A 78 ? O PHE L 78 A 3 4 O THR A 79 ? O THR L 79 N SER A 68 ? N SER L 68 B 1 2 N LEU A 11 ? N LEU L 11 O GLN A 110 ? O GLN L 110 B 2 3 O LEU A 109 ? O LEU L 109 N ALA A 89 ? N ALA L 89 B 3 4 O TYR A 92 ? O TYR L 92 N TYR A 41 ? N TYR L 41 B 4 5 N GLN A 42 ? N GLN L 42 O LYS A 50 ? O LYS L 50 B 5 6 N TYR A 54 ? N TYR L 54 O ASN A 58 ? O ASN L 58 C 1 2 N LEU A 11 ? N LEU L 11 O GLN A 110 ? O GLN L 110 C 2 3 O LEU A 109 ? O LEU L 109 N ALA A 89 ? N ALA L 89 C 3 4 N GLN A 95 ? N GLN L 95 O THR A 102 ? O THR L 102 D 1 2 N PHE A 123 ? N PHE L 123 O VAL A 138 ? O VAL L 138 D 2 3 N VAL A 137 ? N VAL L 137 O LEU A 184 ? O LEU L 184 D 3 4 O THR A 183 ? O THR L 183 N GLN A 165 ? N GLN L 165 E 1 2 O ALA A 158 ? O ALA L 158 N VAL A 155 ? N VAL L 155 E 2 3 N GLN A 152 ? N GLN L 152 O GLU A 200 ? O GLU L 200 E 3 4 N VAL A 201 ? N VAL L 201 O VAL A 210 ? O VAL L 210 F 1 2 N GLN B 3 ? N GLN H 3 O SER B 25 ? O SER H 25 F 2 3 N LEU B 18 ? N LEU H 18 O MET B 83 ? O MET H 83 F 3 4 O PHE B 80 ? O PHE H 80 N SER B 71 ? N SER H 71 G 1 2 N VAL B 12 ? N VAL H 12 O THR B 116 ? O THR H 116 G 2 3 O VAL B 115 ? O VAL H 115 N GLY B 92 ? N GLY H 92 G 3 4 O PHE B 95 ? O PHE H 95 N VAL B 37 ? N VAL H 37 G 4 5 N ARG B 38 ? N ARG H 38 O GLU B 46 ? O GLU H 46 G 5 6 N TYR B 50 ? N TYR H 50 O ASP B 59 ? O ASP H 59 H 1 2 N VAL B 12 ? N VAL H 12 O THR B 116 ? O THR H 116 H 2 3 O VAL B 115 ? O VAL H 115 N GLY B 92 ? N GLY H 92 H 3 4 N ARG B 98 ? N ARG H 98 O TYR B 108 ? O TYR H 108 I 1 2 N LEU B 130 ? N LEU H 130 O GLY B 145 ? O GLY H 145 I 2 3 N ALA B 142 ? N ALA H 142 O VAL B 190 ? O VAL H 190 I 3 4 O VAL B 187 ? O VAL H 187 N HIS B 170 ? N HIS H 170 J 1 2 N LEU B 130 ? N LEU H 130 O GLY B 145 ? O GLY H 145 J 2 3 N ALA B 142 ? N ALA H 142 O VAL B 190 ? O VAL H 190 J 3 4 O SER B 183 ? O SER H 183 N VAL B 175 ? N VAL H 175 K 1 2 N SER B 159 ? N SER H 159 O ASN B 203 ? O ASN H 203 K 2 3 N VAL B 204 ? N VAL H 204 O VAL B 213 ? O VAL H 213 # _pdbx_entry_details.entry_id 1S3K _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL L 56 ? ? 70.16 -53.80 2 1 ALA L 89 ? ? 177.23 -176.15 3 1 ASN L 143 ? ? 47.03 73.61 4 1 PRO L 146 ? ? -69.82 -179.46 5 1 PHE H 106 ? ? -117.47 72.92 6 1 PRO H 153 ? ? -100.98 -167.90 # _pdbx_molecule_features.prd_id PRD_900124 _pdbx_molecule_features.name 'Lewis Y antigen, alpha anomer' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Antigen _pdbx_molecule_features.details 'oligosaccharide with branches' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900124 _pdbx_molecule.asym_id C # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L GLY 217 ? A GLY 217 2 1 Y 1 L GLU 218 ? A GLU 218 3 1 Y 1 L CYS 219 ? A CYS 219 4 1 Y 1 H SER 133 ? B SER 133 5 1 Y 1 H SER 134 ? B SER 134 6 1 Y 1 H LYS 135 ? B LYS 135 7 1 Y 1 H SER 136 ? B SER 136 8 1 Y 1 H THR 137 ? B THR 137 9 1 Y 1 H SER 138 ? B SER 138 10 1 Y 1 H GLY 139 ? B GLY 139 11 1 Y 1 H LYS 220 ? B LYS 220 12 1 Y 1 H SER 221 ? B SER 221 13 1 Y 1 H CYS 222 ? B CYS 222 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FUC C1 C N R 88 FUC C2 C N S 89 FUC C3 C N R 90 FUC C4 C N S 91 FUC C5 C N S 92 FUC C6 C N N 93 FUC O1 O N N 94 FUC O2 O N N 95 FUC O3 O N N 96 FUC O4 O N N 97 FUC O5 O N N 98 FUC H1 H N N 99 FUC H2 H N N 100 FUC H3 H N N 101 FUC H4 H N N 102 FUC H5 H N N 103 FUC H61 H N N 104 FUC H62 H N N 105 FUC H63 H N N 106 FUC HO1 H N N 107 FUC HO2 H N N 108 FUC HO3 H N N 109 FUC HO4 H N N 110 GAL C1 C N R 111 GAL C2 C N R 112 GAL C3 C N S 113 GAL C4 C N R 114 GAL C5 C N R 115 GAL C6 C N N 116 GAL O1 O N N 117 GAL O2 O N N 118 GAL O3 O N N 119 GAL O4 O N N 120 GAL O5 O N N 121 GAL O6 O N N 122 GAL H1 H N N 123 GAL H2 H N N 124 GAL H3 H N N 125 GAL H4 H N N 126 GAL H5 H N N 127 GAL H61 H N N 128 GAL H62 H N N 129 GAL HO1 H N N 130 GAL HO2 H N N 131 GAL HO3 H N N 132 GAL HO4 H N N 133 GAL HO6 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 GOL C1 C N N 184 GOL O1 O N N 185 GOL C2 C N N 186 GOL O2 O N N 187 GOL C3 C N N 188 GOL O3 O N N 189 GOL H11 H N N 190 GOL H12 H N N 191 GOL HO1 H N N 192 GOL H2 H N N 193 GOL HO2 H N N 194 GOL H31 H N N 195 GOL H32 H N N 196 GOL HO3 H N N 197 HIS N N N N 198 HIS CA C N S 199 HIS C C N N 200 HIS O O N N 201 HIS CB C N N 202 HIS CG C Y N 203 HIS ND1 N Y N 204 HIS CD2 C Y N 205 HIS CE1 C Y N 206 HIS NE2 N Y N 207 HIS OXT O N N 208 HIS H H N N 209 HIS H2 H N N 210 HIS HA H N N 211 HIS HB2 H N N 212 HIS HB3 H N N 213 HIS HD1 H N N 214 HIS HD2 H N N 215 HIS HE1 H N N 216 HIS HE2 H N N 217 HIS HXT H N N 218 HOH O O N N 219 HOH H1 H N N 220 HOH H2 H N N 221 ILE N N N N 222 ILE CA C N S 223 ILE C C N N 224 ILE O O N N 225 ILE CB C N S 226 ILE CG1 C N N 227 ILE CG2 C N N 228 ILE CD1 C N N 229 ILE OXT O N N 230 ILE H H N N 231 ILE H2 H N N 232 ILE HA H N N 233 ILE HB H N N 234 ILE HG12 H N N 235 ILE HG13 H N N 236 ILE HG21 H N N 237 ILE HG22 H N N 238 ILE HG23 H N N 239 ILE HD11 H N N 240 ILE HD12 H N N 241 ILE HD13 H N N 242 ILE HXT H N N 243 LEU N N N N 244 LEU CA C N S 245 LEU C C N N 246 LEU O O N N 247 LEU CB C N N 248 LEU CG C N N 249 LEU CD1 C N N 250 LEU CD2 C N N 251 LEU OXT O N N 252 LEU H H N N 253 LEU H2 H N N 254 LEU HA H N N 255 LEU HB2 H N N 256 LEU HB3 H N N 257 LEU HG H N N 258 LEU HD11 H N N 259 LEU HD12 H N N 260 LEU HD13 H N N 261 LEU HD21 H N N 262 LEU HD22 H N N 263 LEU HD23 H N N 264 LEU HXT H N N 265 LYS N N N N 266 LYS CA C N S 267 LYS C C N N 268 LYS O O N N 269 LYS CB C N N 270 LYS CG C N N 271 LYS CD C N N 272 LYS CE C N N 273 LYS NZ N N N 274 LYS OXT O N N 275 LYS H H N N 276 LYS H2 H N N 277 LYS HA H N N 278 LYS HB2 H N N 279 LYS HB3 H N N 280 LYS HG2 H N N 281 LYS HG3 H N N 282 LYS HD2 H N N 283 LYS HD3 H N N 284 LYS HE2 H N N 285 LYS HE3 H N N 286 LYS HZ1 H N N 287 LYS HZ2 H N N 288 LYS HZ3 H N N 289 LYS HXT H N N 290 MET N N N N 291 MET CA C N S 292 MET C C N N 293 MET O O N N 294 MET CB C N N 295 MET CG C N N 296 MET SD S N N 297 MET CE C N N 298 MET OXT O N N 299 MET H H N N 300 MET H2 H N N 301 MET HA H N N 302 MET HB2 H N N 303 MET HB3 H N N 304 MET HG2 H N N 305 MET HG3 H N N 306 MET HE1 H N N 307 MET HE2 H N N 308 MET HE3 H N N 309 MET HXT H N N 310 NDG C1 C N S 311 NDG C2 C N R 312 NDG C3 C N R 313 NDG C4 C N S 314 NDG C5 C N R 315 NDG C6 C N N 316 NDG C7 C N N 317 NDG C8 C N N 318 NDG O5 O N N 319 NDG O3 O N N 320 NDG O4 O N N 321 NDG O6 O N N 322 NDG O7 O N N 323 NDG N2 N N N 324 NDG O1 O N N 325 NDG H1 H N N 326 NDG H2 H N N 327 NDG H3 H N N 328 NDG H4 H N N 329 NDG H5 H N N 330 NDG H61 H N N 331 NDG H62 H N N 332 NDG H81 H N N 333 NDG H82 H N N 334 NDG H83 H N N 335 NDG HO3 H N N 336 NDG HO4 H N N 337 NDG HO6 H N N 338 NDG HN2 H N N 339 NDG HO1 H N N 340 PHE N N N N 341 PHE CA C N S 342 PHE C C N N 343 PHE O O N N 344 PHE CB C N N 345 PHE CG C Y N 346 PHE CD1 C Y N 347 PHE CD2 C Y N 348 PHE CE1 C Y N 349 PHE CE2 C Y N 350 PHE CZ C Y N 351 PHE OXT O N N 352 PHE H H N N 353 PHE H2 H N N 354 PHE HA H N N 355 PHE HB2 H N N 356 PHE HB3 H N N 357 PHE HD1 H N N 358 PHE HD2 H N N 359 PHE HE1 H N N 360 PHE HE2 H N N 361 PHE HZ H N N 362 PHE HXT H N N 363 PRO N N N N 364 PRO CA C N S 365 PRO C C N N 366 PRO O O N N 367 PRO CB C N N 368 PRO CG C N N 369 PRO CD C N N 370 PRO OXT O N N 371 PRO H H N N 372 PRO HA H N N 373 PRO HB2 H N N 374 PRO HB3 H N N 375 PRO HG2 H N N 376 PRO HG3 H N N 377 PRO HD2 H N N 378 PRO HD3 H N N 379 PRO HXT H N N 380 SER N N N N 381 SER CA C N S 382 SER C C N N 383 SER O O N N 384 SER CB C N N 385 SER OG O N N 386 SER OXT O N N 387 SER H H N N 388 SER H2 H N N 389 SER HA H N N 390 SER HB2 H N N 391 SER HB3 H N N 392 SER HG H N N 393 SER HXT H N N 394 THR N N N N 395 THR CA C N S 396 THR C C N N 397 THR O O N N 398 THR CB C N R 399 THR OG1 O N N 400 THR CG2 C N N 401 THR OXT O N N 402 THR H H N N 403 THR H2 H N N 404 THR HA H N N 405 THR HB H N N 406 THR HG1 H N N 407 THR HG21 H N N 408 THR HG22 H N N 409 THR HG23 H N N 410 THR HXT H N N 411 TRP N N N N 412 TRP CA C N S 413 TRP C C N N 414 TRP O O N N 415 TRP CB C N N 416 TRP CG C Y N 417 TRP CD1 C Y N 418 TRP CD2 C Y N 419 TRP NE1 N Y N 420 TRP CE2 C Y N 421 TRP CE3 C Y N 422 TRP CZ2 C Y N 423 TRP CZ3 C Y N 424 TRP CH2 C Y N 425 TRP OXT O N N 426 TRP H H N N 427 TRP H2 H N N 428 TRP HA H N N 429 TRP HB2 H N N 430 TRP HB3 H N N 431 TRP HD1 H N N 432 TRP HE1 H N N 433 TRP HE3 H N N 434 TRP HZ2 H N N 435 TRP HZ3 H N N 436 TRP HH2 H N N 437 TRP HXT H N N 438 TYR N N N N 439 TYR CA C N S 440 TYR C C N N 441 TYR O O N N 442 TYR CB C N N 443 TYR CG C Y N 444 TYR CD1 C Y N 445 TYR CD2 C Y N 446 TYR CE1 C Y N 447 TYR CE2 C Y N 448 TYR CZ C Y N 449 TYR OH O N N 450 TYR OXT O N N 451 TYR H H N N 452 TYR H2 H N N 453 TYR HA H N N 454 TYR HB2 H N N 455 TYR HB3 H N N 456 TYR HD1 H N N 457 TYR HD2 H N N 458 TYR HE1 H N N 459 TYR HE2 H N N 460 TYR HH H N N 461 TYR HXT H N N 462 VAL N N N N 463 VAL CA C N S 464 VAL C C N N 465 VAL O O N N 466 VAL CB C N N 467 VAL CG1 C N N 468 VAL CG2 C N N 469 VAL OXT O N N 470 VAL H H N N 471 VAL H2 H N N 472 VAL HA H N N 473 VAL HB H N N 474 VAL HG11 H N N 475 VAL HG12 H N N 476 VAL HG13 H N N 477 VAL HG21 H N N 478 VAL HG22 H N N 479 VAL HG23 H N N 480 VAL HXT H N N 481 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GAL C1 C2 sing N N 106 GAL C1 O1 sing N N 107 GAL C1 O5 sing N N 108 GAL C1 H1 sing N N 109 GAL C2 C3 sing N N 110 GAL C2 O2 sing N N 111 GAL C2 H2 sing N N 112 GAL C3 C4 sing N N 113 GAL C3 O3 sing N N 114 GAL C3 H3 sing N N 115 GAL C4 C5 sing N N 116 GAL C4 O4 sing N N 117 GAL C4 H4 sing N N 118 GAL C5 C6 sing N N 119 GAL C5 O5 sing N N 120 GAL C5 H5 sing N N 121 GAL C6 O6 sing N N 122 GAL C6 H61 sing N N 123 GAL C6 H62 sing N N 124 GAL O1 HO1 sing N N 125 GAL O2 HO2 sing N N 126 GAL O3 HO3 sing N N 127 GAL O4 HO4 sing N N 128 GAL O6 HO6 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 GOL C1 O1 sing N N 176 GOL C1 C2 sing N N 177 GOL C1 H11 sing N N 178 GOL C1 H12 sing N N 179 GOL O1 HO1 sing N N 180 GOL C2 O2 sing N N 181 GOL C2 C3 sing N N 182 GOL C2 H2 sing N N 183 GOL O2 HO2 sing N N 184 GOL C3 O3 sing N N 185 GOL C3 H31 sing N N 186 GOL C3 H32 sing N N 187 GOL O3 HO3 sing N N 188 HIS N CA sing N N 189 HIS N H sing N N 190 HIS N H2 sing N N 191 HIS CA C sing N N 192 HIS CA CB sing N N 193 HIS CA HA sing N N 194 HIS C O doub N N 195 HIS C OXT sing N N 196 HIS CB CG sing N N 197 HIS CB HB2 sing N N 198 HIS CB HB3 sing N N 199 HIS CG ND1 sing Y N 200 HIS CG CD2 doub Y N 201 HIS ND1 CE1 doub Y N 202 HIS ND1 HD1 sing N N 203 HIS CD2 NE2 sing Y N 204 HIS CD2 HD2 sing N N 205 HIS CE1 NE2 sing Y N 206 HIS CE1 HE1 sing N N 207 HIS NE2 HE2 sing N N 208 HIS OXT HXT sing N N 209 HOH O H1 sing N N 210 HOH O H2 sing N N 211 ILE N CA sing N N 212 ILE N H sing N N 213 ILE N H2 sing N N 214 ILE CA C sing N N 215 ILE CA CB sing N N 216 ILE CA HA sing N N 217 ILE C O doub N N 218 ILE C OXT sing N N 219 ILE CB CG1 sing N N 220 ILE CB CG2 sing N N 221 ILE CB HB sing N N 222 ILE CG1 CD1 sing N N 223 ILE CG1 HG12 sing N N 224 ILE CG1 HG13 sing N N 225 ILE CG2 HG21 sing N N 226 ILE CG2 HG22 sing N N 227 ILE CG2 HG23 sing N N 228 ILE CD1 HD11 sing N N 229 ILE CD1 HD12 sing N N 230 ILE CD1 HD13 sing N N 231 ILE OXT HXT sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 NDG C1 C2 sing N N 297 NDG C1 O5 sing N N 298 NDG C1 O1 sing N N 299 NDG C1 H1 sing N N 300 NDG C2 C3 sing N N 301 NDG C2 N2 sing N N 302 NDG C2 H2 sing N N 303 NDG C3 C4 sing N N 304 NDG C3 O3 sing N N 305 NDG C3 H3 sing N N 306 NDG C4 C5 sing N N 307 NDG C4 O4 sing N N 308 NDG C4 H4 sing N N 309 NDG C5 C6 sing N N 310 NDG C5 O5 sing N N 311 NDG C5 H5 sing N N 312 NDG C6 O6 sing N N 313 NDG C6 H61 sing N N 314 NDG C6 H62 sing N N 315 NDG C7 C8 sing N N 316 NDG C7 O7 doub N N 317 NDG C7 N2 sing N N 318 NDG C8 H81 sing N N 319 NDG C8 H82 sing N N 320 NDG C8 H83 sing N N 321 NDG O3 HO3 sing N N 322 NDG O4 HO4 sing N N 323 NDG O6 HO6 sing N N 324 NDG N2 HN2 sing N N 325 NDG O1 HO1 sing N N 326 PHE N CA sing N N 327 PHE N H sing N N 328 PHE N H2 sing N N 329 PHE CA C sing N N 330 PHE CA CB sing N N 331 PHE CA HA sing N N 332 PHE C O doub N N 333 PHE C OXT sing N N 334 PHE CB CG sing N N 335 PHE CB HB2 sing N N 336 PHE CB HB3 sing N N 337 PHE CG CD1 doub Y N 338 PHE CG CD2 sing Y N 339 PHE CD1 CE1 sing Y N 340 PHE CD1 HD1 sing N N 341 PHE CD2 CE2 doub Y N 342 PHE CD2 HD2 sing N N 343 PHE CE1 CZ doub Y N 344 PHE CE1 HE1 sing N N 345 PHE CE2 CZ sing Y N 346 PHE CE2 HE2 sing N N 347 PHE CZ HZ sing N N 348 PHE OXT HXT sing N N 349 PRO N CA sing N N 350 PRO N CD sing N N 351 PRO N H sing N N 352 PRO CA C sing N N 353 PRO CA CB sing N N 354 PRO CA HA sing N N 355 PRO C O doub N N 356 PRO C OXT sing N N 357 PRO CB CG sing N N 358 PRO CB HB2 sing N N 359 PRO CB HB3 sing N N 360 PRO CG CD sing N N 361 PRO CG HG2 sing N N 362 PRO CG HG3 sing N N 363 PRO CD HD2 sing N N 364 PRO CD HD3 sing N N 365 PRO OXT HXT sing N N 366 SER N CA sing N N 367 SER N H sing N N 368 SER N H2 sing N N 369 SER CA C sing N N 370 SER CA CB sing N N 371 SER CA HA sing N N 372 SER C O doub N N 373 SER C OXT sing N N 374 SER CB OG sing N N 375 SER CB HB2 sing N N 376 SER CB HB3 sing N N 377 SER OG HG sing N N 378 SER OXT HXT sing N N 379 THR N CA sing N N 380 THR N H sing N N 381 THR N H2 sing N N 382 THR CA C sing N N 383 THR CA CB sing N N 384 THR CA HA sing N N 385 THR C O doub N N 386 THR C OXT sing N N 387 THR CB OG1 sing N N 388 THR CB CG2 sing N N 389 THR CB HB sing N N 390 THR OG1 HG1 sing N N 391 THR CG2 HG21 sing N N 392 THR CG2 HG22 sing N N 393 THR CG2 HG23 sing N N 394 THR OXT HXT sing N N 395 TRP N CA sing N N 396 TRP N H sing N N 397 TRP N H2 sing N N 398 TRP CA C sing N N 399 TRP CA CB sing N N 400 TRP CA HA sing N N 401 TRP C O doub N N 402 TRP C OXT sing N N 403 TRP CB CG sing N N 404 TRP CB HB2 sing N N 405 TRP CB HB3 sing N N 406 TRP CG CD1 doub Y N 407 TRP CG CD2 sing Y N 408 TRP CD1 NE1 sing Y N 409 TRP CD1 HD1 sing N N 410 TRP CD2 CE2 doub Y N 411 TRP CD2 CE3 sing Y N 412 TRP NE1 CE2 sing Y N 413 TRP NE1 HE1 sing N N 414 TRP CE2 CZ2 sing Y N 415 TRP CE3 CZ3 doub Y N 416 TRP CE3 HE3 sing N N 417 TRP CZ2 CH2 doub Y N 418 TRP CZ2 HZ2 sing N N 419 TRP CZ3 CH2 sing Y N 420 TRP CZ3 HZ3 sing N N 421 TRP CH2 HH2 sing N N 422 TRP OXT HXT sing N N 423 TYR N CA sing N N 424 TYR N H sing N N 425 TYR N H2 sing N N 426 TYR CA C sing N N 427 TYR CA CB sing N N 428 TYR CA HA sing N N 429 TYR C O doub N N 430 TYR C OXT sing N N 431 TYR CB CG sing N N 432 TYR CB HB2 sing N N 433 TYR CB HB3 sing N N 434 TYR CG CD1 doub Y N 435 TYR CG CD2 sing Y N 436 TYR CD1 CE1 sing Y N 437 TYR CD1 HD1 sing N N 438 TYR CD2 CE2 doub Y N 439 TYR CD2 HD2 sing N N 440 TYR CE1 CZ doub Y N 441 TYR CE1 HE1 sing N N 442 TYR CE2 CZ sing Y N 443 TYR CE2 HE2 sing N N 444 TYR CZ OH sing N N 445 TYR OH HH sing N N 446 TYR OXT HXT sing N N 447 VAL N CA sing N N 448 VAL N H sing N N 449 VAL N H2 sing N N 450 VAL CA C sing N N 451 VAL CA CB sing N N 452 VAL CA HA sing N N 453 VAL C O doub N N 454 VAL C OXT sing N N 455 VAL CB CG1 sing N N 456 VAL CB CG2 sing N N 457 VAL CB HB sing N N 458 VAL CG1 HG11 sing N N 459 VAL CG1 HG12 sing N N 460 VAL CG1 HG13 sing N N 461 VAL CG2 HG21 sing N N 462 VAL CG2 HG22 sing N N 463 VAL CG2 HG23 sing N N 464 VAL OXT HXT sing N N 465 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NDG 1 n 3 GAL 2 n 3 FUC 3 n 3 FUC 4 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1CLY _pdbx_initial_refinement_model.details 'PDB ENTRY 1CLY' # _atom_sites.entry_id 1S3K _atom_sites.fract_transf_matrix[1][1] 0.013936 _atom_sites.fract_transf_matrix[1][2] 0.008046 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016092 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011094 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_