HEADER TRANSFERASE 14-JAN-04 1S3Z TITLE AMINOGLYCOSIDE N-ACETYLTRANSFERASE AAC(6')-IY IN COMPLEX WITH COA AND TITLE 2 RIBOSTAMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOGLYCOSIDE 6'-N-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AMINOGLYCOSIDE N-ACETYLTRANSFERASE AAC(6')-IY; COMPND 5 EC: 2.3.1.82; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERITIDIS; SOURCE 3 ORGANISM_TAXID: 592; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28A+ KEYWDS GNAT, N-ACETYLTRANSFERASE, ACETYLTRANSFERASE, AMINOGLYCOSIDE, COA, KEYWDS 2 RIBOSTAMYCIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,S.MAGNET,E.NIEVES,S.L.RODERICK,J.S.BLACHARD REVDAT 4 14-FEB-24 1S3Z 1 REMARK SEQADV HETSYN LINK REVDAT 3 16-NOV-11 1S3Z 1 VERSN HETATM REVDAT 2 24-FEB-09 1S3Z 1 VERSN REVDAT 1 18-MAY-04 1S3Z 0 JRNL AUTH M.W.VETTING,S.MAGNET,E.NIEVES,S.L.RODERICK,J.S.BLACHARD JRNL TITL A BACTERIAL ACETYLTRANSFERASE CAPABLE OF REGIOSELECTIVE JRNL TITL 2 N-ACETYLATION OF ANTIBIOTICS AND HISTONES JRNL REF CHEM.BIOL. V. 11 565 2004 JRNL REFN ISSN 1074-5521 JRNL PMID 15123251 JRNL DOI 10.1016/J.CHEMBIOL.2004.03.017 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.MAGNET,T.LAMBERT,P.COURVALIN,J.S.BLANCHARD REMARK 1 TITL KINETIC AND MUTAGENIC CHARACTERIZATION OF THE CHROMOSOMALLY REMARK 1 TITL 2 ENCODED SALMONELLA ENTERICA AAC(6')-IY AMINOGLYCOSIDE REMARK 1 TITL 3 N-ACETYLTRANSFERASE REMARK 1 REF BIOCHEMISTRY V. 40 3700 2001 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI002736E REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 20954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1011 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1780 REMARK 3 BIN FREE R VALUE : 0.2270 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2318 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 169 REMARK 3 SOLVENT ATOMS : 217 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 BOND ANGLES (DEGREES) : 1.980 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021337. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 77.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MSC BLUE CONFOCAL REMARK 200 OPTICS : MSC BLUE CONFOCAL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20976 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.15200 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE, AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, AMMONIUM SULFATE, REMARK 280 TRIETHANOLAMINE, COENZYME A, RIBOSTAMYCIN, PH 8.0, VAPOR REMARK 280 DIFFUSION UNDER OIL, TEMPERATURE 293K, PH 8.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.49450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.34400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.49450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.34400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER AS GENERATED FROM THE REMARK 300 DIMER IN THE ASSYMETRIC UNIT BY THE OPERATIONS X,Y,Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 829 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL B 76 CB VAL B 76 CG2 -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 25 N - CA - C ANGL. DEV. = -24.4 DEGREES REMARK 500 ASP A 41 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 VAL B 76 CB - CA - C ANGL. DEV. = -15.9 DEGREES REMARK 500 ASP B 115 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 135 -70.51 -107.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 700 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 0 NE2 REMARK 620 2 ASP A 2 OD1 114.9 REMARK 620 3 HIS A 42 NE2 108.1 94.9 REMARK 620 4 HIS A 64 NE2 110.2 113.1 114.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIO A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RIO B 501 DBREF 1S3Z A 1 145 UNP Q9R381 Q9R381_SALEN 1 145 DBREF 1S3Z B 1 145 UNP Q9R381 Q9R381_SALEN 1 145 SEQADV 1S3Z MET A -19 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z GLY A -18 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER A -17 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER A -16 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A -15 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A -14 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A -13 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A -12 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A -11 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A -10 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER A -9 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER A -8 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z GLY A -7 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z LEU A -6 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z VAL A -5 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z PRO A -4 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z ARG A -3 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z GLY A -2 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER A -1 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS A 0 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z MET B -19 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z GLY B -18 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER B -17 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER B -16 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B -15 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B -14 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B -13 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B -12 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B -11 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B -10 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER B -9 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER B -8 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z GLY B -7 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z LEU B -6 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z VAL B -5 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z PRO B -4 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z ARG B -3 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z GLY B -2 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z SER B -1 UNP Q9R381 EXPRESSION TAG SEQADV 1S3Z HIS B 0 UNP Q9R381 EXPRESSION TAG SEQRES 1 A 165 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 165 LEU VAL PRO ARG GLY SER HIS MET ASP ILE ARG GLN MET SEQRES 3 A 165 ASN LYS THR HIS LEU GLU HIS TRP ARG GLY LEU ARG LYS SEQRES 4 A 165 GLN LEU TRP PRO GLY HIS PRO ASP ASP ALA HIS LEU ALA SEQRES 5 A 165 ASP GLY GLU GLU ILE LEU GLN ALA ASP HIS LEU ALA SER SEQRES 6 A 165 PHE ILE ALA MET ALA ASP GLY VAL ALA ILE GLY PHE ALA SEQRES 7 A 165 ASP ALA SER ILE ARG HIS ASP TYR VAL ASN GLY CYS ASP SEQRES 8 A 165 SER SER PRO VAL VAL PHE LEU GLU GLY ILE PHE VAL LEU SEQRES 9 A 165 PRO SER PHE ARG GLN ARG GLY VAL ALA LYS GLN LEU ILE SEQRES 10 A 165 ALA ALA VAL GLN ARG TRP GLY THR ASN LYS GLY CYS ARG SEQRES 11 A 165 GLU MET ALA SER ASP THR SER PRO GLU ASN THR ILE SER SEQRES 12 A 165 GLN LYS VAL HIS GLN ALA LEU GLY PHE GLU GLU THR GLU SEQRES 13 A 165 ARG VAL ILE PHE TYR ARG LYS ARG CYS SEQRES 1 B 165 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 165 LEU VAL PRO ARG GLY SER HIS MET ASP ILE ARG GLN MET SEQRES 3 B 165 ASN LYS THR HIS LEU GLU HIS TRP ARG GLY LEU ARG LYS SEQRES 4 B 165 GLN LEU TRP PRO GLY HIS PRO ASP ASP ALA HIS LEU ALA SEQRES 5 B 165 ASP GLY GLU GLU ILE LEU GLN ALA ASP HIS LEU ALA SER SEQRES 6 B 165 PHE ILE ALA MET ALA ASP GLY VAL ALA ILE GLY PHE ALA SEQRES 7 B 165 ASP ALA SER ILE ARG HIS ASP TYR VAL ASN GLY CYS ASP SEQRES 8 B 165 SER SER PRO VAL VAL PHE LEU GLU GLY ILE PHE VAL LEU SEQRES 9 B 165 PRO SER PHE ARG GLN ARG GLY VAL ALA LYS GLN LEU ILE SEQRES 10 B 165 ALA ALA VAL GLN ARG TRP GLY THR ASN LYS GLY CYS ARG SEQRES 11 B 165 GLU MET ALA SER ASP THR SER PRO GLU ASN THR ILE SER SEQRES 12 B 165 GLN LYS VAL HIS GLN ALA LEU GLY PHE GLU GLU THR GLU SEQRES 13 B 165 ARG VAL ILE PHE TYR ARG LYS ARG CYS HET NI A 700 1 HET SO4 A 800 5 HET COA A 600 48 HET RIO A 500 31 HET SO4 B 801 5 HET COA B 601 48 HET RIO B 501 31 HETNAM NI NICKEL (II) ION HETNAM SO4 SULFATE ION HETNAM COA COENZYME A HETNAM RIO RIBOSTAMYCIN HETSYN RIO 5-AMINO-2-AMINOMETHYL-6-[4,6-DIAMINO-2-(3,4-DIHYDROXY- HETSYN 2 RIO 5-HYDROXYMETHYL-TETRAHYDRO-FURAN-2-YLOXY)-3-HYDROXY- HETSYN 3 RIO CYCLOHEXYLOXY ]-TETRAHYDRO-PYRAN-3,4-DIOL; (1R,2R,3S, HETSYN 4 RIO 4R,6S)-4,6-DIAMINO-3-HYDROXY-2-(BETA-D- HETSYN 5 RIO RIBOFURANOSYLOXY)CYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY- HETSYN 6 RIO ALPHA-D-GLUCOPYRANOSIDE FORMUL 3 NI NI 2+ FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 COA 2(C21 H36 N7 O16 P3 S) FORMUL 6 RIO 2(C17 H34 N4 O10) FORMUL 10 HOH *217(H2 O) HELIX 1 1 ASN A 7 THR A 9 5 3 HELIX 2 2 HIS A 10 TRP A 22 1 13 HELIX 3 3 PRO A 26 ALA A 40 1 15 HELIX 4 4 PRO A 85 ARG A 88 5 4 HELIX 5 5 GLY A 91 LYS A 107 1 17 HELIX 6 6 ASN A 120 LEU A 130 1 11 HELIX 7 7 ASN B 7 THR B 9 5 3 HELIX 8 8 HIS B 10 TRP B 22 1 13 HELIX 9 9 PRO B 26 ALA B 40 1 15 HELIX 10 10 PRO B 85 ARG B 88 5 4 HELIX 11 11 GLY B 91 LYS B 107 1 17 HELIX 12 12 ASN B 120 LEU B 130 1 11 SHEET 1 A12 MET A 1 GLN A 5 0 SHEET 2 A12 LEU A 43 ALA A 50 -1 O MET A 49 N ASP A 2 SHEET 3 A12 VAL A 53 ARG A 63 -1 O ALA A 60 N ALA A 44 SHEET 4 A12 VAL A 75 VAL A 83 -1 O VAL A 75 N ARG A 63 SHEET 5 A12 GLU A 111 THR A 116 1 O ALA A 113 N VAL A 76 SHEET 6 A12 GLU B 133 ARG B 144 -1 O LYS B 143 N MET A 112 SHEET 7 A12 GLU A 133 ARG A 144 -1 N GLU A 136 O PHE B 140 SHEET 8 A12 GLU B 111 THR B 116 -1 O THR B 116 N ILE A 139 SHEET 9 A12 VAL B 75 VAL B 83 1 N VAL B 76 O ALA B 113 SHEET 10 A12 VAL B 53 ARG B 63 -1 N ARG B 63 O VAL B 75 SHEET 11 A12 LEU B 43 ALA B 50 -1 N ALA B 50 O VAL B 53 SHEET 12 A12 ASP B 2 GLN B 5 -1 N ARG B 4 O ILE B 47 LINK NE2 HIS A 0 NI NI A 700 1555 1555 1.92 LINK OD1 ASP A 2 NI NI A 700 1555 1555 1.95 LINK NE2 HIS A 42 NI NI A 700 4545 1555 2.09 LINK NE2 HIS A 64 NI NI A 700 4545 1555 1.90 CISPEP 1 SER A 73 PRO A 74 0 0.33 CISPEP 2 SER B 73 PRO B 74 0 0.46 SITE 1 AC1 4 HIS A 0 ASP A 2 HIS A 42 HIS A 64 SITE 1 AC2 6 THR A 116 SER A 117 ASN A 120 RIO A 500 SITE 2 AC2 6 COA A 600 HOH A 872 SITE 1 AC3 10 ASP B 115 THR B 116 SER B 117 ASN B 120 SITE 2 AC3 10 RIO B 501 COA B 601 HOH B 840 HOH B 870 SITE 3 AC3 10 HOH B 875 HOH B 908 SITE 1 AC4 27 ILE A 81 PHE A 82 VAL A 83 ARG A 88 SITE 2 AC4 27 GLN A 89 ARG A 90 GLY A 91 VAL A 92 SITE 3 AC4 27 ALA A 93 LYS A 94 ASN A 120 ILE A 122 SITE 4 AC4 27 SER A 123 LYS A 125 VAL A 126 ALA A 129 SITE 5 AC4 27 RIO A 500 SO4 A 800 HOH A 801 HOH A 809 SITE 6 AC4 27 HOH A 836 HOH A 837 HOH A 882 HOH A 895 SITE 7 AC4 27 ARG B 110 HOH B 845 HOH B 900 SITE 1 AC5 26 ILE B 81 PHE B 82 VAL B 83 ARG B 88 SITE 2 AC5 26 GLN B 89 ARG B 90 GLY B 91 VAL B 92 SITE 3 AC5 26 ALA B 93 LYS B 94 ASN B 120 ILE B 122 SITE 4 AC5 26 SER B 123 VAL B 126 ALA B 129 RIO B 501 SITE 5 AC5 26 SO4 B 801 HOH B 812 HOH B 813 HOH B 829 SITE 6 AC5 26 HOH B 836 HOH B 853 HOH B 856 HOH B 876 SITE 7 AC5 26 HOH B 884 HOH B 910 SITE 1 AC6 17 TRP A 22 HIS A 25 GLU A 79 ASP A 115 SITE 2 AC6 17 COA A 600 SO4 A 800 HOH A 819 HOH A 820 SITE 3 AC6 17 HOH A 828 HOH A 838 HOH A 842 HOH A 866 SITE 4 AC6 17 HOH A 879 LYS B 8 TYR B 66 ASN B 68 SITE 5 AC6 17 GLU B 136 SITE 1 AC7 21 TYR A 66 GLU A 136 VAL A 138 ARG B 18 SITE 2 AC7 21 TRP B 22 HIS B 25 GLU B 79 ASP B 115 SITE 3 AC7 21 THR B 116 COA B 601 SO4 B 801 HOH B 809 SITE 4 AC7 21 HOH B 810 HOH B 811 HOH B 816 HOH B 827 SITE 5 AC7 21 HOH B 840 HOH B 846 HOH B 850 HOH B 859 SITE 6 AC7 21 HOH B 904 CRYST1 84.989 44.688 87.974 90.00 93.86 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011766 0.000000 0.000794 0.00000 SCALE2 0.000000 0.022377 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011393 0.00000