HEADER PROTEIN BINDING 15-JAN-04 1S44 TITLE THE STRUCTURE AND REFINEMENT OF APOCRUSTACYANIN C2 TO 1.6A RESOLUTION TITLE 2 AND THE SEARCH FOR DIFFERENCES BETWEEN THIS PROTEIN AND THE TITLE 3 HOMOLOGOUS APOPROTEINS A1 AND C1. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRUSTACYANIN A1 SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: HOMO DIMER SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMARUS GAMMARUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN LOBSTER; SOURCE 4 ORGANISM_TAXID: 6707 KEYWDS CRUSTACYANIN, REFINEMENT, POST-TRANSLATIONAL MODIFICATIONS, GLYCEROL, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.HABASH,J.R.HELLIWELL,J.RAFTERY,M.CIANCI,P.J.RIZKALLAH,N.E.CHAYEN, AUTHOR 2 G.A.NNEJI,P.F.ZAGALSKY REVDAT 7 23-AUG-23 1S44 1 REMARK REVDAT 6 04-APR-18 1S44 1 REMARK REVDAT 5 13-JUL-11 1S44 1 VERSN REVDAT 4 24-FEB-09 1S44 1 VERSN REVDAT 3 22-JUN-04 1S44 1 JRNL REVDAT 2 25-MAY-04 1S44 1 AUTHOR REVDAT 1 27-APR-04 1S44 0 JRNL AUTH J.HABASH,J.R.HELLIWELL,J.RAFTERY,M.CIANCI,P.J.RIZKALLAH, JRNL AUTH 2 N.E.CHAYEN,G.A.NNEJI,P.F.ZAGALSKY JRNL TITL THE STRUCTURE AND REFINEMENT OF APOCRUSTACYANIN C2 TO 1.3 A JRNL TITL 2 RESOLUTION AND THE SEARCH FOR DIFFERENCES BETWEEN THIS JRNL TITL 3 PROTEIN AND THE HOMOLOGOUS APOPROTEINS A1 AND C1. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 493 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 14993674 JRNL DOI 10.1107/S090744490400037X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 TITL STRUCTURE OF LOBSTER APOCRUSTACYANIN A1 USING SOFTER X-RAYS. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 57 1219 2001 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 45426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2430 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3298 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2902 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 479 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.599 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3015 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2546 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4099 ; 2.265 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5955 ; 1.255 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 358 ; 5.843 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 499 ;18.295 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 427 ; 0.187 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3360 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 648 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 633 ; 0.235 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2608 ; 0.223 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1 ; 0.007 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 432 ; 0.169 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.175 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.400 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.288 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 35 ; 0.295 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1798 ; 1.408 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2910 ; 2.126 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1217 ; 3.440 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1189 ; 5.024 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1S44 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021342. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47856 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 23.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NOT APPLICABLE REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1H91 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.3M AMMONIUM SULPHATE, 20% GLYCEROL, REMARK 280 PH 9, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.58350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.78100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.93950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.78100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.58350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.93950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 SO4 A 491 O HOH A 575 2.11 REMARK 500 O HOH B 533 O HOH B 675 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 2 O HOH A 641 1455 1.47 REMARK 500 CE LYS B 2 O HOH A 641 1455 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 21 CB TRP A 21 CG -0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 59 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 160 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 16 CB - CG - OD1 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP B 16 CB - CG - OD2 ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP B 59 CB - CG - OD2 ANGL. DEV. = 8.2 DEGREES REMARK 500 ASP B 144 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG B 163 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP B 176 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 100 -155.95 -151.54 REMARK 500 GLU A 109 140.82 -173.04 REMARK 500 TYR A 112 -35.69 67.67 REMARK 500 ASN A 114 -45.29 -133.97 REMARK 500 ASP B 16 71.97 48.04 REMARK 500 ASN B 42 121.23 -38.89 REMARK 500 TYR B 112 -41.31 73.98 REMARK 500 ASN B 114 -49.58 -130.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 492 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 481 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 482 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1S2P RELATED DB: PDB REMARK 900 THE SAME PROTEIN BUT AT DIFFERENT RESOLUTION. HERE RESIDUE 181 IS REMARK 900 VAL WHICH IS NOT CORRECT. IN THE 1.3A RESOLUTION (PDB CODE 1S2P) REMARK 900 THIS RESIDUE IS MODELLED AS LEU WHICH IS CORRECT. DBREF 1S44 A 2 181 UNP P58989 CRA1_HOMGA 2 181 DBREF 1S44 B 2 181 UNP P58989 CRA1_HOMGA 2 181 SEQRES 1 A 180 LYS ILE PRO ASN PHE VAL VAL PRO GLY LYS CYS ALA SER SEQRES 2 A 180 VAL ASP ARG ASN LYS LEU TRP ALA GLU GLN THR PRO ASN SEQRES 3 A 180 ARG ASN SER TYR ALA GLY VAL TRP TYR GLN PHE ALA LEU SEQRES 4 A 180 THR ASN ASN PRO TYR GLN LEU ILE GLU LYS CYS VAL ARG SEQRES 5 A 180 ASN GLU TYR SER PHE ASP GLY LYS GLN PHE VAL ILE LYS SEQRES 6 A 180 SER THR GLY ILE ALA TYR ASP GLY ASN LEU LEU LYS ARG SEQRES 7 A 180 ASN GLY LYS LEU TYR PRO ASN PRO PHE GLY GLU PRO HIS SEQRES 8 A 180 LEU SER ILE ASP TYR GLU ASN SER PHE ALA ALA PRO LEU SEQRES 9 A 180 VAL ILE LEU GLU THR ASP TYR SER ASN TYR ALA CYS LEU SEQRES 10 A 180 TYR SER CYS ILE ASP TYR ASN PHE GLY TYR HIS SER ASP SEQRES 11 A 180 PHE SER PHE ILE PHE SER ARG SER ALA ASN LEU ALA ASP SEQRES 12 A 180 GLN TYR VAL LYS LYS CYS GLU ALA ALA PHE LYS ASN ILE SEQRES 13 A 180 ASN VAL ASP THR THR ARG PHE VAL LYS THR VAL GLN GLY SEQRES 14 A 180 SER SER CYS PRO TYR ASP THR GLN LYS THR VAL SEQRES 1 B 180 LYS ILE PRO ASN PHE VAL VAL PRO GLY LYS CYS ALA SER SEQRES 2 B 180 VAL ASP ARG ASN LYS LEU TRP ALA GLU GLN THR PRO ASN SEQRES 3 B 180 ARG ASN SER TYR ALA GLY VAL TRP TYR GLN PHE ALA LEU SEQRES 4 B 180 THR ASN ASN PRO TYR GLN LEU ILE GLU LYS CYS VAL ARG SEQRES 5 B 180 ASN GLU TYR SER PHE ASP GLY LYS GLN PHE VAL ILE LYS SEQRES 6 B 180 SER THR GLY ILE ALA TYR ASP GLY ASN LEU LEU LYS ARG SEQRES 7 B 180 ASN GLY LYS LEU TYR PRO ASN PRO PHE GLY GLU PRO HIS SEQRES 8 B 180 LEU SER ILE ASP TYR GLU ASN SER PHE ALA ALA PRO LEU SEQRES 9 B 180 VAL ILE LEU GLU THR ASP TYR SER ASN TYR ALA CYS LEU SEQRES 10 B 180 TYR SER CYS ILE ASP TYR ASN PHE GLY TYR HIS SER ASP SEQRES 11 B 180 PHE SER PHE ILE PHE SER ARG SER ALA ASN LEU ALA ASP SEQRES 12 B 180 GLN TYR VAL LYS LYS CYS GLU ALA ALA PHE LYS ASN ILE SEQRES 13 B 180 ASN VAL ASP THR THR ARG PHE VAL LYS THR VAL GLN GLY SEQRES 14 B 180 SER SER CYS PRO TYR ASP THR GLN LYS THR VAL HET SO4 A 491 5 HET MPD A 481 8 HET MPD A 482 8 HET SO4 B 492 5 HET GOL B 501 6 HETNAM SO4 SULFATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 MPD 2(C6 H14 O2) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *479(H2 O) HELIX 1 1 ASP A 16 THR A 25 1 10 HELIX 2 2 ASN A 27 ALA A 32 1 6 HELIX 3 3 ALA A 143 ILE A 157 1 15 HELIX 4 4 ASP A 160 THR A 162 5 3 HELIX 5 5 PRO A 174 LYS A 179 1 6 HELIX 6 6 ASP B 16 THR B 25 1 10 HELIX 7 7 ASN B 27 ALA B 32 1 6 HELIX 8 8 ALA B 143 ASN B 156 1 14 HELIX 9 9 ASP B 160 THR B 162 5 3 HELIX 10 10 PRO B 174 LYS B 179 1 6 SHEET 1 A 4 VAL A 7 PRO A 9 0 SHEET 2 A 4 TYR A 128 SER A 137 -1 O HIS A 129 N VAL A 8 SHEET 3 A 4 GLY A 33 THR A 41 -1 N TYR A 36 O SER A 137 SHEET 4 A 4 PHE A 164 LYS A 166 -1 O VAL A 165 N LEU A 40 SHEET 1 B10 VAL A 7 PRO A 9 0 SHEET 2 B10 TYR A 128 SER A 137 -1 O HIS A 129 N VAL A 8 SHEET 3 B10 TYR A 115 ASP A 123 -1 N ALA A 116 O PHE A 136 SHEET 4 B10 ALA A 102 THR A 110 -1 N GLU A 109 O CYS A 117 SHEET 5 B10 LEU A 93 TYR A 97 -1 N ILE A 95 O ALA A 103 SHEET 6 B10 LEU A 76 PRO A 85 -1 N TYR A 84 O SER A 94 SHEET 7 B10 PHE A 63 ALA A 71 -1 N SER A 67 O ARG A 79 SHEET 8 B10 ILE A 48 PHE A 58 -1 N ARG A 53 O THR A 68 SHEET 9 B10 GLY A 33 THR A 41 -1 N TRP A 35 O ASN A 54 SHEET 10 B10 PHE A 164 LYS A 166 -1 O VAL A 165 N LEU A 40 SHEET 1 C 4 VAL B 7 PRO B 9 0 SHEET 2 C 4 TYR B 128 SER B 137 -1 O HIS B 129 N VAL B 8 SHEET 3 C 4 GLY B 33 THR B 41 -1 N TYR B 36 O SER B 137 SHEET 4 C 4 PHE B 164 LYS B 166 -1 O VAL B 165 N LEU B 40 SHEET 1 D10 VAL B 7 PRO B 9 0 SHEET 2 D10 TYR B 128 SER B 137 -1 O HIS B 129 N VAL B 8 SHEET 3 D10 TYR B 115 ASP B 123 -1 N ALA B 116 O PHE B 136 SHEET 4 D10 ALA B 102 THR B 110 -1 N GLU B 109 O CYS B 117 SHEET 5 D10 LEU B 93 TYR B 97 -1 N ILE B 95 O ALA B 103 SHEET 6 D10 LEU B 76 PRO B 85 -1 N TYR B 84 O SER B 94 SHEET 7 D10 PHE B 63 ALA B 71 -1 N SER B 67 O ARG B 79 SHEET 8 D10 ILE B 48 PHE B 58 -1 N GLU B 55 O LYS B 66 SHEET 9 D10 GLY B 33 THR B 41 -1 N TRP B 35 O ASN B 54 SHEET 10 D10 PHE B 164 LYS B 166 -1 O VAL B 165 N LEU B 40 SSBOND 1 CYS A 12 CYS A 121 1555 1555 2.02 SSBOND 2 CYS A 51 CYS A 173 1555 1555 2.05 SSBOND 3 CYS A 117 CYS A 150 1555 1555 2.07 SSBOND 4 CYS B 12 CYS B 121 1555 1555 2.10 SSBOND 5 CYS B 51 CYS B 173 1555 1555 2.05 SSBOND 6 CYS B 117 CYS B 150 1555 1555 2.06 SITE 1 AC1 8 SER A 14 VAL A 15 ASP A 16 ARG A 17 SITE 2 AC1 8 HOH A 575 HOH A 598 HOH A 641 LYS B 2 SITE 1 AC2 5 SER B 14 VAL B 15 ASP B 16 ARG B 17 SITE 2 AC2 5 HOH B 662 SITE 1 AC3 7 ASN B 54 TYR B 97 PHE B 134 PHE B 136 SITE 2 AC3 7 HOH B 554 HOH B 571 HOH B 637 SITE 1 AC4 7 GLN A 46 TYR A 97 MPD A 482 HOH A 523 SITE 2 AC4 7 HOH A 537 HOH A 557 HOH A 580 SITE 1 AC5 6 ASN A 43 TYR A 45 ILE A 95 PHE A 101 SITE 2 AC5 6 MPD A 481 HOH A 655 CRYST1 41.167 79.879 109.562 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024291 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009127 0.00000