HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JAN-04 1S4C TITLE YHCH PROTEIN (HI0227) COPPER COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN HI0227; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 GENE: HI0227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DOUBLE-STRANDED BETA-HELIX, STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.TEPLYAKOV,G.OBMOLOVA,J.TOEDT,G.L.GILLILAND REVDAT 4 23-AUG-23 1S4C 1 REMARK LINK REVDAT 3 16-FEB-10 1S4C 1 JRNL REVDAT 2 24-FEB-09 1S4C 1 VERSN REVDAT 1 14-JUN-05 1S4C 0 JRNL AUTH A.TEPLYAKOV,G.OBMOLOVA,J.TOEDT,M.Y.GALPERIN,G.L.GILLILAND JRNL TITL CRYSTAL STRUCTURE OF THE BACTERIAL YHCH PROTEIN INDICATES A JRNL TITL 2 ROLE IN SIALIC ACID CATABOLISM. JRNL REF J.BACTERIOL. V. 187 5520 2005 JRNL REFN ISSN 0021-9193 JRNL PMID 16077096 JRNL DOI 10.1128/JB.187.16.5520-5527.2005 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 29480 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM 5% REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1475 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1472 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4752 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 154 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.68000 REMARK 3 B22 (A**2) : -0.88000 REMARK 3 B33 (A**2) : -4.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.303 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.231 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.174 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.962 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4859 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6589 ; 1.865 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 584 ; 7.321 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 752 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3629 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2146 ; 0.272 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 219 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.076 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.245 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.199 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2979 ; 4.418 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4875 ; 8.151 ; 8.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1880 ;12.819 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1714 ;14.526 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S4C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021350. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3766, 1.3804, 1.1000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29577 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 29.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.09000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: 1JOP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 4000, 1 M SODIUM ACETATE, 0.1 REMARK 280 M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 76.95000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE PROTEIN IS DIMERIC IN SOLUTION. THERE ARE TWO DIMERS IN REMARK 300 THE ASYMMETRIC PART OF THE UNIT CELL, AD AND BC. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 136 REMARK 465 ASN A 137 REMARK 465 GLY A 138 REMARK 465 LYS A 139 REMARK 465 THR A 140 REMARK 465 GLU C 53 REMARK 465 THR C 54 REMARK 465 ALA C 55 REMARK 465 GLU C 56 REMARK 465 PRO C 57 REMARK 465 SER C 58 REMARK 465 SER C 59 REMARK 465 LYS C 60 REMARK 465 GLU D 53 REMARK 465 THR D 54 REMARK 465 ALA D 55 REMARK 465 GLU D 56 REMARK 465 PRO D 57 REMARK 465 SER D 58 REMARK 465 SER D 59 REMARK 465 LYS D 60 REMARK 465 VAL D 136 REMARK 465 ASN D 137 REMARK 465 GLY D 138 REMARK 465 LYS D 139 REMARK 465 THR D 140 REMARK 465 GLU D 141 REMARK 465 LYS D 142 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 146 CA - CB - CG ANGL. DEV. = 18.7 DEGREES REMARK 500 ASP B 30 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 110 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 LEU B 146 CA - CB - CG ANGL. DEV. = 20.8 DEGREES REMARK 500 ASP C 40 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP C 43 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 LEU C 64 CA - CB - CG ANGL. DEV. = 17.2 DEGREES REMARK 500 LEU C 69 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 ASP C 101 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP C 110 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 LEU C 146 CA - CB - CG ANGL. DEV. = 17.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 -165.89 -165.78 REMARK 500 GLU A 51 68.69 -117.54 REMARK 500 GLU A 94 176.46 -58.09 REMARK 500 LYS A 119 -7.01 77.80 REMARK 500 TYR A 127 1.38 81.46 REMARK 500 ASN B 42 -161.17 -165.79 REMARK 500 LYS B 119 -1.54 75.53 REMARK 500 TYR B 127 0.29 87.43 REMARK 500 SER C 4 -151.09 -152.68 REMARK 500 ASN C 36 152.76 -42.43 REMARK 500 ILE C 41 -38.93 -132.51 REMARK 500 LYS C 119 -8.54 78.41 REMARK 500 SER D 4 -147.22 -146.03 REMARK 500 ILE D 41 -64.45 -90.36 REMARK 500 LYS D 92 6.24 -63.41 REMARK 500 LYS D 119 -9.63 80.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 201 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 NE2 REMARK 620 2 ASP A 70 OD2 108.5 REMARK 620 3 HIS A 130 NE2 102.7 104.4 REMARK 620 4 ACT A 205 OXT 130.5 103.5 104.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 202 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 63 OE2 REMARK 620 2 HIS B 65 NE2 86.7 REMARK 620 3 ASP B 70 OD2 151.1 108.8 REMARK 620 4 HIS B 130 NE2 96.2 114.2 99.1 REMARK 620 5 HOH B 227 O 60.0 126.1 91.6 110.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU C 203 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 65 NE2 REMARK 620 2 ASP C 70 OD2 106.7 REMARK 620 3 HIS C 130 NE2 109.3 98.0 REMARK 620 4 HOH C 215 O 104.5 97.6 136.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU D 204 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 65 NE2 REMARK 620 2 ASP D 70 OD2 118.9 REMARK 620 3 HIS D 130 NE2 111.9 92.1 REMARK 620 4 HOH D 232 O 110.9 82.2 133.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU D 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JOP RELATED DB: PDB REMARK 900 HI0227 MERCURY DERIVATIVE DBREF 1S4C A 1 155 UNP P44583 Y227_HAEIN 1 155 DBREF 1S4C B 1 155 UNP P44583 Y227_HAEIN 1 155 DBREF 1S4C C 1 155 UNP P44583 Y227_HAEIN 1 155 DBREF 1S4C D 1 155 UNP P44583 Y227_HAEIN 1 155 SEQRES 1 A 155 MET ILE ILE SER SER LEU THR ASN PRO ASN PHE LYS VAL SEQRES 2 A 155 GLY LEU PRO LYS VAL ILE ALA GLU VAL CYS ASP TYR LEU SEQRES 3 A 155 ASN THR LEU ASP LEU ASN ALA LEU GLU ASN GLY ARG HIS SEQRES 4 A 155 ASP ILE ASN ASP GLN ILE TYR MET ASN VAL MET GLU PRO SEQRES 5 A 155 GLU THR ALA GLU PRO SER SER LYS LYS ALA GLU LEU HIS SEQRES 6 A 155 HIS GLU TYR LEU ASP VAL GLN VAL LEU ILE ARG GLY THR SEQRES 7 A 155 GLU ASN ILE GLU VAL GLY ALA THR TYR PRO ASN LEU SER SEQRES 8 A 155 LYS TYR GLU ASP TYR ASN GLU ALA ASP ASP TYR GLN LEU SEQRES 9 A 155 CYS ALA ASP ILE ASP ASP LYS PHE THR VAL THR MET LYS SEQRES 10 A 155 PRO LYS MET PHE ALA VAL PHE TYR PRO TYR GLU PRO HIS SEQRES 11 A 155 LYS PRO CYS CYS VAL VAL ASN GLY LYS THR GLU LYS ILE SEQRES 12 A 155 LYS LYS LEU VAL VAL LYS VAL PRO VAL LYS LEU ILE SEQRES 1 B 155 MET ILE ILE SER SER LEU THR ASN PRO ASN PHE LYS VAL SEQRES 2 B 155 GLY LEU PRO LYS VAL ILE ALA GLU VAL CYS ASP TYR LEU SEQRES 3 B 155 ASN THR LEU ASP LEU ASN ALA LEU GLU ASN GLY ARG HIS SEQRES 4 B 155 ASP ILE ASN ASP GLN ILE TYR MET ASN VAL MET GLU PRO SEQRES 5 B 155 GLU THR ALA GLU PRO SER SER LYS LYS ALA GLU LEU HIS SEQRES 6 B 155 HIS GLU TYR LEU ASP VAL GLN VAL LEU ILE ARG GLY THR SEQRES 7 B 155 GLU ASN ILE GLU VAL GLY ALA THR TYR PRO ASN LEU SER SEQRES 8 B 155 LYS TYR GLU ASP TYR ASN GLU ALA ASP ASP TYR GLN LEU SEQRES 9 B 155 CYS ALA ASP ILE ASP ASP LYS PHE THR VAL THR MET LYS SEQRES 10 B 155 PRO LYS MET PHE ALA VAL PHE TYR PRO TYR GLU PRO HIS SEQRES 11 B 155 LYS PRO CYS CYS VAL VAL ASN GLY LYS THR GLU LYS ILE SEQRES 12 B 155 LYS LYS LEU VAL VAL LYS VAL PRO VAL LYS LEU ILE SEQRES 1 C 155 MET ILE ILE SER SER LEU THR ASN PRO ASN PHE LYS VAL SEQRES 2 C 155 GLY LEU PRO LYS VAL ILE ALA GLU VAL CYS ASP TYR LEU SEQRES 3 C 155 ASN THR LEU ASP LEU ASN ALA LEU GLU ASN GLY ARG HIS SEQRES 4 C 155 ASP ILE ASN ASP GLN ILE TYR MET ASN VAL MET GLU PRO SEQRES 5 C 155 GLU THR ALA GLU PRO SER SER LYS LYS ALA GLU LEU HIS SEQRES 6 C 155 HIS GLU TYR LEU ASP VAL GLN VAL LEU ILE ARG GLY THR SEQRES 7 C 155 GLU ASN ILE GLU VAL GLY ALA THR TYR PRO ASN LEU SER SEQRES 8 C 155 LYS TYR GLU ASP TYR ASN GLU ALA ASP ASP TYR GLN LEU SEQRES 9 C 155 CYS ALA ASP ILE ASP ASP LYS PHE THR VAL THR MET LYS SEQRES 10 C 155 PRO LYS MET PHE ALA VAL PHE TYR PRO TYR GLU PRO HIS SEQRES 11 C 155 LYS PRO CYS CYS VAL VAL ASN GLY LYS THR GLU LYS ILE SEQRES 12 C 155 LYS LYS LEU VAL VAL LYS VAL PRO VAL LYS LEU ILE SEQRES 1 D 155 MET ILE ILE SER SER LEU THR ASN PRO ASN PHE LYS VAL SEQRES 2 D 155 GLY LEU PRO LYS VAL ILE ALA GLU VAL CYS ASP TYR LEU SEQRES 3 D 155 ASN THR LEU ASP LEU ASN ALA LEU GLU ASN GLY ARG HIS SEQRES 4 D 155 ASP ILE ASN ASP GLN ILE TYR MET ASN VAL MET GLU PRO SEQRES 5 D 155 GLU THR ALA GLU PRO SER SER LYS LYS ALA GLU LEU HIS SEQRES 6 D 155 HIS GLU TYR LEU ASP VAL GLN VAL LEU ILE ARG GLY THR SEQRES 7 D 155 GLU ASN ILE GLU VAL GLY ALA THR TYR PRO ASN LEU SER SEQRES 8 D 155 LYS TYR GLU ASP TYR ASN GLU ALA ASP ASP TYR GLN LEU SEQRES 9 D 155 CYS ALA ASP ILE ASP ASP LYS PHE THR VAL THR MET LYS SEQRES 10 D 155 PRO LYS MET PHE ALA VAL PHE TYR PRO TYR GLU PRO HIS SEQRES 11 D 155 LYS PRO CYS CYS VAL VAL ASN GLY LYS THR GLU LYS ILE SEQRES 12 D 155 LYS LYS LEU VAL VAL LYS VAL PRO VAL LYS LEU ILE HET CU A 201 1 HET ACT A 205 4 HET CU B 202 1 HET CU C 203 1 HET CU D 204 1 HETNAM CU COPPER (II) ION HETNAM ACT ACETATE ION FORMUL 5 CU 4(CU 2+) FORMUL 6 ACT C2 H3 O2 1- FORMUL 10 HOH *154(H2 O) HELIX 1 1 PRO A 16 ASN A 27 1 12 HELIX 2 2 THR A 28 LEU A 29 5 2 HELIX 3 3 ASP A 30 LEU A 34 5 5 HELIX 4 4 GLU A 56 LYS A 60 5 5 HELIX 5 5 ASN A 89 TYR A 93 5 5 HELIX 6 6 LYS A 153 ILE A 155 5 3 HELIX 7 7 PRO B 16 ASN B 27 1 12 HELIX 8 8 THR B 28 LEU B 29 5 2 HELIX 9 9 ASP B 30 LEU B 34 5 5 HELIX 10 10 GLU B 56 LYS B 60 5 5 HELIX 11 11 ASN B 89 TYR B 93 5 5 HELIX 12 12 LYS B 153 ILE B 155 5 3 HELIX 13 13 PRO C 16 THR C 28 1 13 HELIX 14 14 LEU C 29 LEU C 29 5 1 HELIX 15 15 ASP C 30 LEU C 34 5 5 HELIX 16 16 ASN C 89 TYR C 93 5 5 HELIX 17 17 LYS C 153 ILE C 155 5 3 HELIX 18 18 PRO D 16 THR D 28 1 13 HELIX 19 19 LYS D 153 ILE D 155 5 3 SHEET 1 A 6 ILE A 2 SER A 5 0 SHEET 2 A 6 MET A 120 PHE A 124 -1 O VAL A 123 N ILE A 2 SHEET 3 A 6 TYR A 68 ARG A 76 -1 N GLN A 72 O ALA A 122 SHEET 4 A 6 LYS A 144 PRO A 151 -1 O VAL A 150 N LEU A 69 SHEET 5 A 6 TYR A 46 MET A 50 -1 N ASN A 48 O VAL A 147 SHEET 6 A 6 GLY A 37 ASP A 40 -1 N HIS A 39 O MET A 47 SHEET 1 B 2 ALA A 62 LEU A 64 0 SHEET 2 B 2 GLN A 103 CYS A 105 -1 O CYS A 105 N ALA A 62 SHEET 1 C 3 PHE A 112 MET A 116 0 SHEET 2 C 3 GLU A 79 VAL A 83 -1 N GLU A 79 O MET A 116 SHEET 3 C 3 HIS A 130 CYS A 134 -1 O CYS A 134 N ASN A 80 SHEET 1 D 6 ILE B 2 SER B 5 0 SHEET 2 D 6 MET B 120 PHE B 124 -1 O PHE B 121 N SER B 4 SHEET 3 D 6 TYR B 68 ARG B 76 -1 N GLN B 72 O ALA B 122 SHEET 4 D 6 LYS B 144 PRO B 151 -1 O VAL B 150 N LEU B 69 SHEET 5 D 6 TYR B 46 MET B 50 -1 N TYR B 46 O LYS B 149 SHEET 6 D 6 GLY B 37 ASP B 40 -1 N HIS B 39 O MET B 47 SHEET 1 E 2 ALA B 62 LEU B 64 0 SHEET 2 E 2 GLN B 103 CYS B 105 -1 O CYS B 105 N ALA B 62 SHEET 1 F 3 LYS B 111 MET B 116 0 SHEET 2 F 3 GLU B 79 GLY B 84 -1 N GLU B 79 O MET B 116 SHEET 3 F 3 HIS B 130 CYS B 134 -1 O CYS B 134 N ASN B 80 SHEET 1 G 6 ILE C 2 SER C 5 0 SHEET 2 G 6 MET C 120 PHE C 124 -1 O PHE C 121 N SER C 4 SHEET 3 G 6 TYR C 68 ARG C 76 -1 N GLN C 72 O ALA C 122 SHEET 4 G 6 LYS C 144 PRO C 151 -1 O VAL C 150 N LEU C 69 SHEET 5 G 6 TYR C 46 MET C 50 -1 N TYR C 46 O LYS C 149 SHEET 6 G 6 GLY C 37 ASP C 40 -1 N GLY C 37 O VAL C 49 SHEET 1 H 2 ALA C 62 LEU C 64 0 SHEET 2 H 2 GLN C 103 CYS C 105 -1 O CYS C 105 N ALA C 62 SHEET 1 I 3 PHE C 112 MET C 116 0 SHEET 2 I 3 GLU C 79 VAL C 83 -1 N GLU C 79 O MET C 116 SHEET 3 I 3 HIS C 130 CYS C 134 -1 O LYS C 131 N GLU C 82 SHEET 1 J 6 ILE D 2 SER D 5 0 SHEET 2 J 6 MET D 120 PHE D 124 -1 O VAL D 123 N ILE D 2 SHEET 3 J 6 TYR D 68 ARG D 76 -1 N ASP D 70 O PHE D 124 SHEET 4 J 6 LYS D 144 PRO D 151 -1 O VAL D 148 N VAL D 71 SHEET 5 J 6 TYR D 46 MET D 50 -1 N TYR D 46 O LYS D 149 SHEET 6 J 6 GLY D 37 ASP D 40 -1 N HIS D 39 O MET D 47 SHEET 1 K 2 ALA D 62 LEU D 64 0 SHEET 2 K 2 GLN D 103 CYS D 105 -1 O GLN D 103 N LEU D 64 SHEET 1 L 3 LYS D 111 MET D 116 0 SHEET 2 L 3 GLU D 79 GLY D 84 -1 N GLU D 79 O MET D 116 SHEET 3 L 3 HIS D 130 CYS D 134 -1 O CYS D 134 N ASN D 80 LINK NE2 HIS A 65 CU CU A 201 1555 1555 2.24 LINK OD2 ASP A 70 CU CU A 201 1555 1555 1.92 LINK NE2 HIS A 130 CU CU A 201 1555 1555 2.26 LINK CU CU A 201 OXT ACT A 205 1555 1555 2.13 LINK OE2 GLU B 63 CU CU B 202 1555 1555 2.75 LINK NE2 HIS B 65 CU CU B 202 1555 1555 2.01 LINK OD2 ASP B 70 CU CU B 202 1555 1555 1.88 LINK NE2 HIS B 130 CU CU B 202 1555 1555 2.19 LINK CU CU B 202 O HOH B 227 1555 1555 2.28 LINK NE2 HIS C 65 CU CU C 203 1555 1555 2.11 LINK OD2 ASP C 70 CU CU C 203 1555 1555 2.00 LINK NE2 HIS C 130 CU CU C 203 1555 1555 2.19 LINK CU CU C 203 O HOH C 215 1555 1555 2.57 LINK NE2 HIS D 65 CU CU D 204 1555 1555 2.08 LINK OD2 ASP D 70 CU CU D 204 1555 1555 2.18 LINK NE2 HIS D 130 CU CU D 204 1555 1555 2.22 LINK CU CU D 204 O HOH D 232 1555 1555 2.64 SITE 1 AC1 4 HIS A 65 ASP A 70 HIS A 130 ACT A 205 SITE 1 AC2 5 GLU B 63 HIS B 65 ASP B 70 HIS B 130 SITE 2 AC2 5 HOH B 227 SITE 1 AC3 5 GLU C 63 HIS C 65 ASP C 70 HIS C 130 SITE 2 AC3 5 HOH C 215 SITE 1 AC4 5 HIS D 65 ASP D 70 GLN D 72 HIS D 130 SITE 2 AC4 5 HOH D 232 SITE 1 AC5 6 GLU A 63 ASP A 70 GLN A 72 HIS A 130 SITE 2 AC5 6 LYS A 149 CU A 201 CRYST1 41.900 153.900 53.800 90.00 112.90 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023866 0.000000 0.010082 0.00000 SCALE2 0.000000 0.006498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020178 0.00000