HEADER TRANSFERASE 16-JAN-04 1S4P TITLE CRYSTAL STRUCTURE OF YEAST ALPHA1,2-MANNOSYLTRANSFERASE KRE2P/MNT1P: TITLE 2 TERNARY COMPLEX WITH GDP/MN AND METHYL-ALPHA-MANNOSIDE ACCEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOLIPID 2-ALPHA-MANNOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALPHA-1,2-MANNOSYLTRANSFERASE; COMPND 5 EC: 2.4.1.131; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: KRE2, MNT1, YDR483W, D8035.26; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KM71; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZAA KEYWDS ALPHA/BETA FOLD, NUCLEOTIDE-BINDING DOMAIN, ROSSMANN FOLD, TERNARY KEYWDS 2 COMPLEX WITH GDP-MN2+ AND METHYL-ALPHA-MANNOSIDE ACCEPTOR, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.D.LOBSANOV,P.A.ROMERO,B.SLENO,B.YU,P.YIP,A.HERSCOVICS,P.L.HOWELL REVDAT 6 16-OCT-24 1S4P 1 REMARK REVDAT 5 23-AUG-23 1S4P 1 HETSYN REVDAT 4 29-JUL-20 1S4P 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 13-JUL-11 1S4P 1 VERSN REVDAT 2 24-FEB-09 1S4P 1 VERSN REVDAT 1 04-MAY-04 1S4P 0 JRNL AUTH Y.D.LOBSANOV,P.A.ROMERO,B.SLENO,B.YU,P.YIP,A.HERSCOVICS, JRNL AUTH 2 P.L.HOWELL JRNL TITL STRUCTURE OF KRE2P/MNT1P: A YEAST JRNL TITL 2 {ALPHA}1,2-MANNOSYLTRANSFERASE INVOLVED IN MANNOPROTEIN JRNL TITL 3 BIOSYNTHESIS JRNL REF J.BIOL.CHEM. V. 279 17921 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 14752117 JRNL DOI 10.1074/JBC.M312720200 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 535846.490 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 46610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3280 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6934 REMARK 3 BIN R VALUE (WORKING SET) : 0.2990 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 528 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5657 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 240 REMARK 3 SOLVENT ATOMS : 853 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.28000 REMARK 3 B22 (A**2) : 2.76000 REMARK 3 B33 (A**2) : -2.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.780 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.960 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.670 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 50.63 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARB+MAM_50.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : GDP_EPE_50.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARB+MAM_50.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : GDP_EPE_50.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S4P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021363. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC CONFOCAL MULTILAYER REMARK 200 MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU) REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50026 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 7.460 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.31600 REMARK 200 R SYM FOR SHELL (I) : 0.31600 REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 1.1 REMARK 200 STARTING MODEL: 1S4O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: GDP, MANGANESE CHLORIDE, METHYL-ALPHA REMARK 280 -MANNOSIDE, PEG 2000 MME, HEPES, SODIUM CHLORIDE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.53400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 95 REMARK 465 PHE A 96 REMARK 465 ALA A 97 REMARK 465 ASP A 98 REMARK 465 ALA A 99 REMARK 465 PRO A 100 REMARK 465 ILE A 101 REMARK 465 ASP A 102 REMARK 465 THR A 103 REMARK 465 ALA A 115 REMARK 465 ASN A 116 REMARK 465 LYS A 117 REMARK 465 ALA A 118 REMARK 465 GLU B 95 REMARK 465 PHE B 96 REMARK 465 ALA B 97 REMARK 465 ASP B 98 REMARK 465 ALA B 99 REMARK 465 PRO B 100 REMARK 465 ILE B 101 REMARK 465 ASP B 102 REMARK 465 ALA B 115 REMARK 465 ASN B 116 REMARK 465 LYS B 117 REMARK 465 ALA B 118 REMARK 465 GLY B 119 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 THR B 103 OG1 CG2 REMARK 470 LYS B 132 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 148 -38.67 -156.64 REMARK 500 TRP A 190 67.82 -162.04 REMARK 500 THR A 274 -76.70 -124.92 REMARK 500 ILE A 284 37.89 -144.15 REMARK 500 LEU A 307 43.56 -99.04 REMARK 500 LEU A 321 5.01 83.30 REMARK 500 GLU A 357 -137.44 -132.49 REMARK 500 ARG A 358 54.23 -152.48 REMARK 500 THR A 415 -54.10 -28.74 REMARK 500 LYS B 132 4.90 -67.77 REMARK 500 ILE B 148 -38.24 -152.21 REMARK 500 TRP B 190 61.46 -155.23 REMARK 500 THR B 274 -60.22 -125.01 REMARK 500 LEU B 307 32.73 -99.98 REMARK 500 LEU B 321 -0.68 83.02 REMARK 500 GLU B 357 -134.31 -135.23 REMARK 500 ARG B 358 54.09 -154.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 909 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 247 OE1 REMARK 620 2 HIS A 388 NE2 77.3 REMARK 620 3 GDP A 904 O2B 102.9 91.9 REMARK 620 4 GDP A 904 O1A 95.0 172.3 89.8 REMARK 620 5 HOH A 939 O 170.7 107.4 85.1 80.2 REMARK 620 6 HOH A1156 O 98.1 90.9 159.0 90.3 74.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 906 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 247 OE1 REMARK 620 2 HIS B 388 NE2 87.4 REMARK 620 3 GDP B 905 O2B 99.9 91.6 REMARK 620 4 GDP B 905 O1A 93.5 178.7 89.1 REMARK 620 5 HOH B1140 O 164.1 102.5 92.3 76.4 REMARK 620 6 HOH B1141 O 88.6 90.9 171.3 88.1 79.0 REMARK 620 N 1 2 3 4 5 DBREF 1S4P A 97 442 UNP P27809 KRE2_YEAST 97 442 DBREF 1S4P B 97 442 UNP P27809 KRE2_YEAST 97 442 SEQADV 1S4P GLU A 95 UNP P27809 CLONING ARTIFACT SEQADV 1S4P PHE A 96 UNP P27809 CLONING ARTIFACT SEQADV 1S4P GLU B 95 UNP P27809 CLONING ARTIFACT SEQADV 1S4P PHE B 96 UNP P27809 CLONING ARTIFACT SEQRES 1 A 348 GLU PHE ALA ASP ALA PRO ILE ASP THR LYS THR THR MET SEQRES 2 A 348 ASP TYR ILE THR PRO SER PHE ALA ASN LYS ALA GLY LYS SEQRES 3 A 348 PRO LYS ALA CYS TYR VAL THR LEU VAL ARG ASN LYS GLU SEQRES 4 A 348 LEU LYS GLY LEU LEU SER SER ILE LYS TYR VAL GLU ASN SEQRES 5 A 348 LYS ILE ASN LYS LYS PHE PRO TYR PRO TRP VAL PHE LEU SEQRES 6 A 348 ASN ASP GLU PRO PHE THR GLU GLU PHE LYS GLU ALA VAL SEQRES 7 A 348 THR LYS ALA VAL SER SER GLU VAL LYS PHE GLY ILE LEU SEQRES 8 A 348 PRO LYS GLU HIS TRP SER TYR PRO GLU TRP ILE ASN GLN SEQRES 9 A 348 THR LYS ALA ALA GLU ILE ARG ALA ASP ALA ALA THR LYS SEQRES 10 A 348 TYR ILE TYR GLY GLY SER GLU SER TYR ARG HIS MET CYS SEQRES 11 A 348 ARG TYR GLN SER GLY PHE PHE TRP ARG HIS GLU LEU LEU SEQRES 12 A 348 GLU GLU TYR ASP TRP TYR TRP ARG VAL GLU PRO ASP ILE SEQRES 13 A 348 LYS LEU TYR CYS ASP ILE ASN TYR ASP VAL PHE LYS TRP SEQRES 14 A 348 MET GLN GLU ASN GLU LYS VAL TYR GLY PHE THR VAL SER SEQRES 15 A 348 ILE HIS GLU TYR GLU VAL THR ILE PRO THR LEU TRP GLN SEQRES 16 A 348 THR SER MET ASP PHE ILE LYS LYS ASN PRO GLU TYR LEU SEQRES 17 A 348 ASP GLU ASN ASN LEU MET SER PHE LEU SER ASN ASP ASN SEQRES 18 A 348 GLY LYS THR TYR ASN LEU CYS HIS PHE TRP SER ASN PHE SEQRES 19 A 348 GLU ILE ALA ASN LEU ASN LEU TRP ARG SER PRO ALA TYR SEQRES 20 A 348 ARG GLU TYR PHE ASP THR LEU ASP HIS GLN GLY GLY PHE SEQRES 21 A 348 PHE TYR GLU ARG TRP GLY ASP ALA PRO VAL HIS SER ILE SEQRES 22 A 348 ALA ALA ALA LEU PHE LEU PRO LYS ASP LYS ILE HIS TYR SEQRES 23 A 348 PHE SER ASP ILE GLY TYR HIS HIS PRO PRO TYR ASP ASN SEQRES 24 A 348 CYS PRO LEU ASP LYS GLU VAL TYR ASN SER ASN ASN CYS SEQRES 25 A 348 GLU CYS ASP GLN GLY ASN ASP PHE THR PHE GLN GLY TYR SEQRES 26 A 348 SER CYS GLY LYS GLU TYR TYR ASP ALA GLN GLY LEU VAL SEQRES 27 A 348 LYS PRO LYS ASN TRP LYS LYS PHE ARG GLU SEQRES 1 B 348 GLU PHE ALA ASP ALA PRO ILE ASP THR LYS THR THR MET SEQRES 2 B 348 ASP TYR ILE THR PRO SER PHE ALA ASN LYS ALA GLY LYS SEQRES 3 B 348 PRO LYS ALA CYS TYR VAL THR LEU VAL ARG ASN LYS GLU SEQRES 4 B 348 LEU LYS GLY LEU LEU SER SER ILE LYS TYR VAL GLU ASN SEQRES 5 B 348 LYS ILE ASN LYS LYS PHE PRO TYR PRO TRP VAL PHE LEU SEQRES 6 B 348 ASN ASP GLU PRO PHE THR GLU GLU PHE LYS GLU ALA VAL SEQRES 7 B 348 THR LYS ALA VAL SER SER GLU VAL LYS PHE GLY ILE LEU SEQRES 8 B 348 PRO LYS GLU HIS TRP SER TYR PRO GLU TRP ILE ASN GLN SEQRES 9 B 348 THR LYS ALA ALA GLU ILE ARG ALA ASP ALA ALA THR LYS SEQRES 10 B 348 TYR ILE TYR GLY GLY SER GLU SER TYR ARG HIS MET CYS SEQRES 11 B 348 ARG TYR GLN SER GLY PHE PHE TRP ARG HIS GLU LEU LEU SEQRES 12 B 348 GLU GLU TYR ASP TRP TYR TRP ARG VAL GLU PRO ASP ILE SEQRES 13 B 348 LYS LEU TYR CYS ASP ILE ASN TYR ASP VAL PHE LYS TRP SEQRES 14 B 348 MET GLN GLU ASN GLU LYS VAL TYR GLY PHE THR VAL SER SEQRES 15 B 348 ILE HIS GLU TYR GLU VAL THR ILE PRO THR LEU TRP GLN SEQRES 16 B 348 THR SER MET ASP PHE ILE LYS LYS ASN PRO GLU TYR LEU SEQRES 17 B 348 ASP GLU ASN ASN LEU MET SER PHE LEU SER ASN ASP ASN SEQRES 18 B 348 GLY LYS THR TYR ASN LEU CYS HIS PHE TRP SER ASN PHE SEQRES 19 B 348 GLU ILE ALA ASN LEU ASN LEU TRP ARG SER PRO ALA TYR SEQRES 20 B 348 ARG GLU TYR PHE ASP THR LEU ASP HIS GLN GLY GLY PHE SEQRES 21 B 348 PHE TYR GLU ARG TRP GLY ASP ALA PRO VAL HIS SER ILE SEQRES 22 B 348 ALA ALA ALA LEU PHE LEU PRO LYS ASP LYS ILE HIS TYR SEQRES 23 B 348 PHE SER ASP ILE GLY TYR HIS HIS PRO PRO TYR ASP ASN SEQRES 24 B 348 CYS PRO LEU ASP LYS GLU VAL TYR ASN SER ASN ASN CYS SEQRES 25 B 348 GLU CYS ASP GLN GLY ASN ASP PHE THR PHE GLN GLY TYR SEQRES 26 B 348 SER CYS GLY LYS GLU TYR TYR ASP ALA GLN GLY LEU VAL SEQRES 27 B 348 LYS PRO LYS ASN TRP LYS LYS PHE ARG GLU MODRES 1S4P ASN A 197 ASN GLYCOSYLATION SITE MODRES 1S4P ASN B 197 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET MAN C 6 11 HET MAN C 7 11 HET MAN C 8 11 HET NAG D 1 14 HET NAG D 2 14 HET MMA A 901 13 HET MN A 909 1 HET CL A 910 1 HET CL A 911 1 HET GDP A 904 28 HET EPE A 903 15 HET MMA B 902 13 HET MN B 906 1 HET CL B 907 1 HET CL B 908 1 HET GDP B 905 28 HET EPE B 913 15 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM MMA METHYL ALPHA-D-MANNOPYRANOSIDE HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MMA O1-METHYL-MANNOSE; METHYL ALPHA-D-MANNOSIDE; METHYL D- HETSYN 2 MMA MANNOSIDE; METHYL MANNOSIDE HETSYN EPE HEPES FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN 5(C6 H12 O6) FORMUL 5 MMA 2(C7 H14 O6) FORMUL 6 MN 2(MN 2+) FORMUL 7 CL 4(CL 1-) FORMUL 9 GDP 2(C10 H15 N5 O11 P2) FORMUL 10 EPE 2(C8 H18 N2 O4 S) FORMUL 17 HOH *853(H2 O) HELIX 1 1 THR A 105 THR A 111 1 7 HELIX 2 2 PRO A 112 PHE A 114 5 3 HELIX 3 3 ARG A 130 LYS A 132 5 3 HELIX 4 4 GLU A 133 ILE A 148 1 16 HELIX 5 5 THR A 165 VAL A 176 1 12 HELIX 6 6 PRO A 186 TRP A 190 5 5 HELIX 7 7 ASN A 197 ALA A 209 1 13 HELIX 8 8 SER A 217 PHE A 230 1 14 HELIX 9 9 PHE A 231 GLU A 238 5 8 HELIX 10 10 ASP A 259 ASN A 267 1 9 HELIX 11 11 TYR A 280 ILE A 284 5 5 HELIX 12 12 THR A 286 ASN A 298 1 13 HELIX 13 13 PRO A 299 LEU A 302 5 4 HELIX 14 14 LEU A 307 SER A 312 1 6 HELIX 15 15 LEU A 333 ARG A 337 1 5 HELIX 16 16 SER A 338 GLY A 352 1 15 HELIX 17 17 GLY A 352 GLU A 357 1 6 HELIX 18 18 GLY A 360 LEU A 373 1 14 HELIX 19 19 PRO A 374 ASP A 376 5 3 HELIX 20 20 ASP A 397 ASN A 404 1 8 HELIX 21 21 ASP A 409 ASP A 413 5 5 HELIX 22 22 CYS A 421 GLY A 430 1 10 HELIX 23 23 ASN A 436 GLU A 442 5 7 HELIX 24 24 THR B 105 TYR B 109 5 5 HELIX 25 25 ILE B 110 PHE B 114 5 5 HELIX 26 26 ARG B 130 LYS B 132 5 3 HELIX 27 27 GLU B 133 ILE B 148 1 16 HELIX 28 28 THR B 165 VAL B 176 1 12 HELIX 29 29 PRO B 186 TRP B 190 5 5 HELIX 30 30 ASN B 197 ALA B 209 1 13 HELIX 31 31 SER B 217 PHE B 230 1 14 HELIX 32 32 PHE B 231 GLU B 238 5 8 HELIX 33 33 ASP B 259 ASN B 267 1 9 HELIX 34 34 TYR B 280 ILE B 284 5 5 HELIX 35 35 THR B 286 ASN B 298 1 13 HELIX 36 36 PRO B 299 LEU B 302 5 4 HELIX 37 37 LEU B 307 SER B 312 1 6 HELIX 38 38 LEU B 333 ARG B 337 1 5 HELIX 39 39 SER B 338 GLY B 352 1 15 HELIX 40 40 GLY B 352 GLU B 357 1 6 HELIX 41 41 GLY B 360 LEU B 373 1 14 HELIX 42 42 PRO B 374 ASP B 376 5 3 HELIX 43 43 ASP B 397 ASN B 404 1 8 HELIX 44 44 ASP B 409 ASP B 413 5 5 HELIX 45 45 CYS B 421 GLY B 430 1 10 HELIX 46 46 ASN B 436 GLU B 442 5 7 SHEET 1 A 7 VAL A 180 ILE A 184 0 SHEET 2 A 7 TRP A 156 ASN A 160 1 N PHE A 158 O LYS A 181 SHEET 3 A 7 ALA A 123 LEU A 128 1 N THR A 127 O VAL A 157 SHEET 4 A 7 TRP A 242 ARG A 245 1 O TRP A 244 N VAL A 126 SHEET 5 A 7 GLU A 329 ASN A 332 -1 O GLU A 329 N ARG A 245 SHEET 6 A 7 TYR A 271 PHE A 273 -1 N GLY A 272 O ILE A 330 SHEET 7 A 7 ILE A 378 TYR A 380 1 O HIS A 379 N TYR A 271 SHEET 1 B 2 SER A 276 HIS A 278 0 SHEET 2 B 2 CYS A 322 PHE A 324 -1 O HIS A 323 N ILE A 277 SHEET 1 C 2 TYR A 386 HIS A 388 0 SHEET 2 C 2 TYR A 391 ASN A 393 -1 O ASN A 393 N TYR A 386 SHEET 1 D 7 VAL B 180 ILE B 184 0 SHEET 2 D 7 TRP B 156 ASN B 160 1 N PHE B 158 O LYS B 181 SHEET 3 D 7 ALA B 123 LEU B 128 1 N THR B 127 O LEU B 159 SHEET 4 D 7 TRP B 242 ARG B 245 1 O TRP B 244 N VAL B 126 SHEET 5 D 7 GLU B 329 ASN B 332 -1 O GLU B 329 N ARG B 245 SHEET 6 D 7 TYR B 271 PHE B 273 -1 N GLY B 272 O ILE B 330 SHEET 7 D 7 ILE B 378 TYR B 380 1 O HIS B 379 N TYR B 271 SHEET 1 E 3 LYS B 251 LEU B 252 0 SHEET 2 E 3 TYR B 386 HIS B 388 -1 O HIS B 387 N LYS B 251 SHEET 3 E 3 TYR B 391 ASN B 393 -1 O ASN B 393 N TYR B 386 SHEET 1 F 2 SER B 276 HIS B 278 0 SHEET 2 F 2 CYS B 322 PHE B 324 -1 O HIS B 323 N ILE B 277 SSBOND 1 CYS A 254 CYS A 406 1555 1555 2.04 SSBOND 2 CYS A 322 CYS A 421 1555 1555 2.03 SSBOND 3 CYS A 394 CYS A 408 1555 1555 2.04 SSBOND 4 CYS B 254 CYS B 406 1555 1555 2.05 SSBOND 5 CYS B 322 CYS B 421 1555 1555 2.03 SSBOND 6 CYS B 394 CYS B 408 1555 1555 2.03 LINK ND2 ASN A 197 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN B 197 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.39 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.41 LINK O6 BMA C 3 C1 MAN C 6 1555 1555 1.40 LINK O2 MAN C 4 C1 MAN C 5 1555 1555 1.40 LINK O3 MAN C 6 C1 MAN C 7 1555 1555 1.39 LINK O6 MAN C 6 C1 MAN C 8 1555 1555 1.40 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38 LINK OE1 GLU A 247 MN MN A 909 1555 1555 2.16 LINK NE2 HIS A 388 MN MN A 909 1555 1555 2.15 LINK O2B GDP A 904 MN MN A 909 1555 1555 2.28 LINK O1A GDP A 904 MN MN A 909 1555 1555 2.22 LINK MN MN A 909 O HOH A 939 1555 1555 2.34 LINK MN MN A 909 O HOH A1156 1555 1555 2.36 LINK OE1 GLU B 247 MN MN B 906 1555 1555 2.27 LINK NE2 HIS B 388 MN MN B 906 1555 1555 2.19 LINK O2B GDP B 905 MN MN B 906 1555 1555 2.26 LINK O1A GDP B 905 MN MN B 906 1555 1555 2.22 LINK MN MN B 906 O HOH B1140 1555 1555 2.32 LINK MN MN B 906 O HOH B1141 1555 1555 2.31 CISPEP 1 PRO A 389 PRO A 390 0 0.31 CISPEP 2 PRO B 389 PRO B 390 0 0.21 CRYST1 60.694 101.068 62.036 90.00 98.81 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016476 0.000000 0.002554 0.00000 SCALE2 0.000000 0.009894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016312 0.00000