HEADER TRANSFERASE 16-JAN-04 1S4P
TITLE CRYSTAL STRUCTURE OF YEAST ALPHA1,2-MANNOSYLTRANSFERASE KRE2P/MNT1P:
TITLE 2 TERNARY COMPLEX WITH GDP/MN AND METHYL-ALPHA-MANNOSIDE ACCEPTOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLYCOLIPID 2-ALPHA-MANNOSYLTRANSFERASE;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: ALPHA-1,2-MANNOSYLTRANSFERASE;
COMPND 5 EC: 2.4.1.131;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST;
SOURCE 4 ORGANISM_TAXID: 4932;
SOURCE 5 GENE: KRE2, MNT1, YDR483W, D8035.26;
SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KM71;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZAA
KEYWDS ALPHA/BETA FOLD, NUCLEOTIDE-BINDING DOMAIN, ROSSMANN FOLD, TERNARY
KEYWDS 2 COMPLEX WITH GDP-MN2+ AND METHYL-ALPHA-MANNOSIDE ACCEPTOR,
KEYWDS 3 TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.D.LOBSANOV,P.A.ROMERO,B.SLENO,B.YU,P.YIP,A.HERSCOVICS,P.L.HOWELL
REVDAT 6 16-OCT-24 1S4P 1 REMARK
REVDAT 5 23-AUG-23 1S4P 1 HETSYN
REVDAT 4 29-JUL-20 1S4P 1 COMPND REMARK SEQADV HETNAM
REVDAT 4 2 1 LINK SITE ATOM
REVDAT 3 13-JUL-11 1S4P 1 VERSN
REVDAT 2 24-FEB-09 1S4P 1 VERSN
REVDAT 1 04-MAY-04 1S4P 0
JRNL AUTH Y.D.LOBSANOV,P.A.ROMERO,B.SLENO,B.YU,P.YIP,A.HERSCOVICS,
JRNL AUTH 2 P.L.HOWELL
JRNL TITL STRUCTURE OF KRE2P/MNT1P: A YEAST
JRNL TITL 2 {ALPHA}1,2-MANNOSYLTRANSFERASE INVOLVED IN MANNOPROTEIN
JRNL TITL 3 BIOSYNTHESIS
JRNL REF J.BIOL.CHEM. V. 279 17921 2004
JRNL REFN ISSN 0021-9258
JRNL PMID 14752117
JRNL DOI 10.1074/JBC.M312720200
REMARK 2
REMARK 2 RESOLUTION. 2.01 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS 1.1
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 REFINEMENT TARGET : ENGH & HUBER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 535846.490
REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8
REMARK 3 NUMBER OF REFLECTIONS : 46610
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING SET) : 0.203
REMARK 3 FREE R VALUE : 0.256
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000
REMARK 3 FREE R VALUE TEST SET COUNT : 3280
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 6
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.14
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.70
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6934
REMARK 3 BIN R VALUE (WORKING SET) : 0.2990
REMARK 3 BIN FREE R VALUE : 0.3470
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.10
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 528
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5657
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 240
REMARK 3 SOLVENT ATOMS : 853
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 31.90
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.28000
REMARK 3 B22 (A**2) : 2.76000
REMARK 3 B33 (A**2) : -2.48000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 2.25000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25
REMARK 3 ESD FROM SIGMAA (A) : 0.22
REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32
REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.600
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.00
REMARK 3 IMPROPER ANGLES (DEGREES) : 1.000
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : 1.270 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.780 ; 2.000
REMARK 3 SIDE-CHAIN BOND (A**2) : 1.960 ; 2.000
REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.670 ; 2.500
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : FLAT MODEL
REMARK 3 KSOL : 0.33
REMARK 3 BSOL : 50.63
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM
REMARK 3 PARAMETER FILE 2 : CARB+MAM_50.PARAM
REMARK 3 PARAMETER FILE 3 : ION.PARAM
REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM
REMARK 3 PARAMETER FILE 5 : GDP_EPE_50.PARAM
REMARK 3 PARAMETER FILE 6 : NULL
REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP
REMARK 3 TOPOLOGY FILE 2 : CARB+MAM_50.TOP
REMARK 3 TOPOLOGY FILE 3 : ION.TOP
REMARK 3 TOPOLOGY FILE 4 : WATER.TOP
REMARK 3 TOPOLOGY FILE 5 : GDP_EPE_50.TOP
REMARK 3 TOPOLOGY FILE 6 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1S4P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-04.
REMARK 100 THE DEPOSITION ID IS D_1000021363.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-FEB-03
REMARK 200 TEMPERATURE (KELVIN) : 93
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : OSMIC CONFOCAL MULTILAYER
REMARK 200 MIRRORS
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR (MSC/RIGAKU)
REMARK 200 DATA SCALING SOFTWARE : D*TREK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50026
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1
REMARK 200 DATA REDUNDANCY : 7.460
REMARK 200 R MERGE (I) : 0.07100
REMARK 200 R SYM (I) : 0.07100
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.9000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08
REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.31600
REMARK 200 R SYM FOR SHELL (I) : 0.31600
REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: CNS 1.1
REMARK 200 STARTING MODEL: 1S4O
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 46.00
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: GDP, MANGANESE CHLORIDE, METHYL-ALPHA
REMARK 280 -MANNOSIDE, PEG 2000 MME, HEPES, SODIUM CHLORIDE, PH 7.5, VAPOR
REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.53400
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 9440 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 26310 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLU A 95
REMARK 465 PHE A 96
REMARK 465 ALA A 97
REMARK 465 ASP A 98
REMARK 465 ALA A 99
REMARK 465 PRO A 100
REMARK 465 ILE A 101
REMARK 465 ASP A 102
REMARK 465 THR A 103
REMARK 465 ALA A 115
REMARK 465 ASN A 116
REMARK 465 LYS A 117
REMARK 465 ALA A 118
REMARK 465 GLU B 95
REMARK 465 PHE B 96
REMARK 465 ALA B 97
REMARK 465 ASP B 98
REMARK 465 ALA B 99
REMARK 465 PRO B 100
REMARK 465 ILE B 101
REMARK 465 ASP B 102
REMARK 465 ALA B 115
REMARK 465 ASN B 116
REMARK 465 LYS B 117
REMARK 465 ALA B 118
REMARK 465 GLY B 119
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LYS A 132 CG CD CE NZ
REMARK 470 THR B 103 OG1 CG2
REMARK 470 LYS B 132 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ILE A 148 -38.67 -156.64
REMARK 500 TRP A 190 67.82 -162.04
REMARK 500 THR A 274 -76.70 -124.92
REMARK 500 ILE A 284 37.89 -144.15
REMARK 500 LEU A 307 43.56 -99.04
REMARK 500 LEU A 321 5.01 83.30
REMARK 500 GLU A 357 -137.44 -132.49
REMARK 500 ARG A 358 54.23 -152.48
REMARK 500 THR A 415 -54.10 -28.74
REMARK 500 LYS B 132 4.90 -67.77
REMARK 500 ILE B 148 -38.24 -152.21
REMARK 500 TRP B 190 61.46 -155.23
REMARK 500 THR B 274 -60.22 -125.01
REMARK 500 LEU B 307 32.73 -99.98
REMARK 500 LEU B 321 -0.68 83.02
REMARK 500 GLU B 357 -134.31 -135.23
REMARK 500 ARG B 358 54.09 -154.64
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MN A 909 MN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 247 OE1
REMARK 620 2 HIS A 388 NE2 77.3
REMARK 620 3 GDP A 904 O2B 102.9 91.9
REMARK 620 4 GDP A 904 O1A 95.0 172.3 89.8
REMARK 620 5 HOH A 939 O 170.7 107.4 85.1 80.2
REMARK 620 6 HOH A1156 O 98.1 90.9 159.0 90.3 74.2
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MN B 906 MN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU B 247 OE1
REMARK 620 2 HIS B 388 NE2 87.4
REMARK 620 3 GDP B 905 O2B 99.9 91.6
REMARK 620 4 GDP B 905 O1A 93.5 178.7 89.1
REMARK 620 5 HOH B1140 O 164.1 102.5 92.3 76.4
REMARK 620 6 HOH B1141 O 88.6 90.9 171.3 88.1 79.0
REMARK 620 N 1 2 3 4 5
DBREF 1S4P A 97 442 UNP P27809 KRE2_YEAST 97 442
DBREF 1S4P B 97 442 UNP P27809 KRE2_YEAST 97 442
SEQADV 1S4P GLU A 95 UNP P27809 CLONING ARTIFACT
SEQADV 1S4P PHE A 96 UNP P27809 CLONING ARTIFACT
SEQADV 1S4P GLU B 95 UNP P27809 CLONING ARTIFACT
SEQADV 1S4P PHE B 96 UNP P27809 CLONING ARTIFACT
SEQRES 1 A 348 GLU PHE ALA ASP ALA PRO ILE ASP THR LYS THR THR MET
SEQRES 2 A 348 ASP TYR ILE THR PRO SER PHE ALA ASN LYS ALA GLY LYS
SEQRES 3 A 348 PRO LYS ALA CYS TYR VAL THR LEU VAL ARG ASN LYS GLU
SEQRES 4 A 348 LEU LYS GLY LEU LEU SER SER ILE LYS TYR VAL GLU ASN
SEQRES 5 A 348 LYS ILE ASN LYS LYS PHE PRO TYR PRO TRP VAL PHE LEU
SEQRES 6 A 348 ASN ASP GLU PRO PHE THR GLU GLU PHE LYS GLU ALA VAL
SEQRES 7 A 348 THR LYS ALA VAL SER SER GLU VAL LYS PHE GLY ILE LEU
SEQRES 8 A 348 PRO LYS GLU HIS TRP SER TYR PRO GLU TRP ILE ASN GLN
SEQRES 9 A 348 THR LYS ALA ALA GLU ILE ARG ALA ASP ALA ALA THR LYS
SEQRES 10 A 348 TYR ILE TYR GLY GLY SER GLU SER TYR ARG HIS MET CYS
SEQRES 11 A 348 ARG TYR GLN SER GLY PHE PHE TRP ARG HIS GLU LEU LEU
SEQRES 12 A 348 GLU GLU TYR ASP TRP TYR TRP ARG VAL GLU PRO ASP ILE
SEQRES 13 A 348 LYS LEU TYR CYS ASP ILE ASN TYR ASP VAL PHE LYS TRP
SEQRES 14 A 348 MET GLN GLU ASN GLU LYS VAL TYR GLY PHE THR VAL SER
SEQRES 15 A 348 ILE HIS GLU TYR GLU VAL THR ILE PRO THR LEU TRP GLN
SEQRES 16 A 348 THR SER MET ASP PHE ILE LYS LYS ASN PRO GLU TYR LEU
SEQRES 17 A 348 ASP GLU ASN ASN LEU MET SER PHE LEU SER ASN ASP ASN
SEQRES 18 A 348 GLY LYS THR TYR ASN LEU CYS HIS PHE TRP SER ASN PHE
SEQRES 19 A 348 GLU ILE ALA ASN LEU ASN LEU TRP ARG SER PRO ALA TYR
SEQRES 20 A 348 ARG GLU TYR PHE ASP THR LEU ASP HIS GLN GLY GLY PHE
SEQRES 21 A 348 PHE TYR GLU ARG TRP GLY ASP ALA PRO VAL HIS SER ILE
SEQRES 22 A 348 ALA ALA ALA LEU PHE LEU PRO LYS ASP LYS ILE HIS TYR
SEQRES 23 A 348 PHE SER ASP ILE GLY TYR HIS HIS PRO PRO TYR ASP ASN
SEQRES 24 A 348 CYS PRO LEU ASP LYS GLU VAL TYR ASN SER ASN ASN CYS
SEQRES 25 A 348 GLU CYS ASP GLN GLY ASN ASP PHE THR PHE GLN GLY TYR
SEQRES 26 A 348 SER CYS GLY LYS GLU TYR TYR ASP ALA GLN GLY LEU VAL
SEQRES 27 A 348 LYS PRO LYS ASN TRP LYS LYS PHE ARG GLU
SEQRES 1 B 348 GLU PHE ALA ASP ALA PRO ILE ASP THR LYS THR THR MET
SEQRES 2 B 348 ASP TYR ILE THR PRO SER PHE ALA ASN LYS ALA GLY LYS
SEQRES 3 B 348 PRO LYS ALA CYS TYR VAL THR LEU VAL ARG ASN LYS GLU
SEQRES 4 B 348 LEU LYS GLY LEU LEU SER SER ILE LYS TYR VAL GLU ASN
SEQRES 5 B 348 LYS ILE ASN LYS LYS PHE PRO TYR PRO TRP VAL PHE LEU
SEQRES 6 B 348 ASN ASP GLU PRO PHE THR GLU GLU PHE LYS GLU ALA VAL
SEQRES 7 B 348 THR LYS ALA VAL SER SER GLU VAL LYS PHE GLY ILE LEU
SEQRES 8 B 348 PRO LYS GLU HIS TRP SER TYR PRO GLU TRP ILE ASN GLN
SEQRES 9 B 348 THR LYS ALA ALA GLU ILE ARG ALA ASP ALA ALA THR LYS
SEQRES 10 B 348 TYR ILE TYR GLY GLY SER GLU SER TYR ARG HIS MET CYS
SEQRES 11 B 348 ARG TYR GLN SER GLY PHE PHE TRP ARG HIS GLU LEU LEU
SEQRES 12 B 348 GLU GLU TYR ASP TRP TYR TRP ARG VAL GLU PRO ASP ILE
SEQRES 13 B 348 LYS LEU TYR CYS ASP ILE ASN TYR ASP VAL PHE LYS TRP
SEQRES 14 B 348 MET GLN GLU ASN GLU LYS VAL TYR GLY PHE THR VAL SER
SEQRES 15 B 348 ILE HIS GLU TYR GLU VAL THR ILE PRO THR LEU TRP GLN
SEQRES 16 B 348 THR SER MET ASP PHE ILE LYS LYS ASN PRO GLU TYR LEU
SEQRES 17 B 348 ASP GLU ASN ASN LEU MET SER PHE LEU SER ASN ASP ASN
SEQRES 18 B 348 GLY LYS THR TYR ASN LEU CYS HIS PHE TRP SER ASN PHE
SEQRES 19 B 348 GLU ILE ALA ASN LEU ASN LEU TRP ARG SER PRO ALA TYR
SEQRES 20 B 348 ARG GLU TYR PHE ASP THR LEU ASP HIS GLN GLY GLY PHE
SEQRES 21 B 348 PHE TYR GLU ARG TRP GLY ASP ALA PRO VAL HIS SER ILE
SEQRES 22 B 348 ALA ALA ALA LEU PHE LEU PRO LYS ASP LYS ILE HIS TYR
SEQRES 23 B 348 PHE SER ASP ILE GLY TYR HIS HIS PRO PRO TYR ASP ASN
SEQRES 24 B 348 CYS PRO LEU ASP LYS GLU VAL TYR ASN SER ASN ASN CYS
SEQRES 25 B 348 GLU CYS ASP GLN GLY ASN ASP PHE THR PHE GLN GLY TYR
SEQRES 26 B 348 SER CYS GLY LYS GLU TYR TYR ASP ALA GLN GLY LEU VAL
SEQRES 27 B 348 LYS PRO LYS ASN TRP LYS LYS PHE ARG GLU
MODRES 1S4P ASN A 197 ASN GLYCOSYLATION SITE
MODRES 1S4P ASN B 197 ASN GLYCOSYLATION SITE
HET NAG C 1 14
HET NAG C 2 14
HET BMA C 3 11
HET MAN C 4 11
HET MAN C 5 11
HET MAN C 6 11
HET MAN C 7 11
HET MAN C 8 11
HET NAG D 1 14
HET NAG D 2 14
HET MMA A 901 13
HET MN A 909 1
HET CL A 910 1
HET CL A 911 1
HET GDP A 904 28
HET EPE A 903 15
HET MMA B 902 13
HET MN B 906 1
HET CL B 907 1
HET CL B 908 1
HET GDP B 905 28
HET EPE B 913 15
HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
HETNAM BMA BETA-D-MANNOPYRANOSE
HETNAM MAN ALPHA-D-MANNOPYRANOSE
HETNAM MMA METHYL ALPHA-D-MANNOPYRANOSIDE
HETNAM MN MANGANESE (II) ION
HETNAM CL CHLORIDE ION
HETNAM GDP GUANOSINE-5'-DIPHOSPHATE
HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-
HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO-
HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE
HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE
HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE
HETSYN MMA O1-METHYL-MANNOSE; METHYL ALPHA-D-MANNOSIDE; METHYL D-
HETSYN 2 MMA MANNOSIDE; METHYL MANNOSIDE
HETSYN EPE HEPES
FORMUL 3 NAG 4(C8 H15 N O6)
FORMUL 3 BMA C6 H12 O6
FORMUL 3 MAN 5(C6 H12 O6)
FORMUL 5 MMA 2(C7 H14 O6)
FORMUL 6 MN 2(MN 2+)
FORMUL 7 CL 4(CL 1-)
FORMUL 9 GDP 2(C10 H15 N5 O11 P2)
FORMUL 10 EPE 2(C8 H18 N2 O4 S)
FORMUL 17 HOH *853(H2 O)
HELIX 1 1 THR A 105 THR A 111 1 7
HELIX 2 2 PRO A 112 PHE A 114 5 3
HELIX 3 3 ARG A 130 LYS A 132 5 3
HELIX 4 4 GLU A 133 ILE A 148 1 16
HELIX 5 5 THR A 165 VAL A 176 1 12
HELIX 6 6 PRO A 186 TRP A 190 5 5
HELIX 7 7 ASN A 197 ALA A 209 1 13
HELIX 8 8 SER A 217 PHE A 230 1 14
HELIX 9 9 PHE A 231 GLU A 238 5 8
HELIX 10 10 ASP A 259 ASN A 267 1 9
HELIX 11 11 TYR A 280 ILE A 284 5 5
HELIX 12 12 THR A 286 ASN A 298 1 13
HELIX 13 13 PRO A 299 LEU A 302 5 4
HELIX 14 14 LEU A 307 SER A 312 1 6
HELIX 15 15 LEU A 333 ARG A 337 1 5
HELIX 16 16 SER A 338 GLY A 352 1 15
HELIX 17 17 GLY A 352 GLU A 357 1 6
HELIX 18 18 GLY A 360 LEU A 373 1 14
HELIX 19 19 PRO A 374 ASP A 376 5 3
HELIX 20 20 ASP A 397 ASN A 404 1 8
HELIX 21 21 ASP A 409 ASP A 413 5 5
HELIX 22 22 CYS A 421 GLY A 430 1 10
HELIX 23 23 ASN A 436 GLU A 442 5 7
HELIX 24 24 THR B 105 TYR B 109 5 5
HELIX 25 25 ILE B 110 PHE B 114 5 5
HELIX 26 26 ARG B 130 LYS B 132 5 3
HELIX 27 27 GLU B 133 ILE B 148 1 16
HELIX 28 28 THR B 165 VAL B 176 1 12
HELIX 29 29 PRO B 186 TRP B 190 5 5
HELIX 30 30 ASN B 197 ALA B 209 1 13
HELIX 31 31 SER B 217 PHE B 230 1 14
HELIX 32 32 PHE B 231 GLU B 238 5 8
HELIX 33 33 ASP B 259 ASN B 267 1 9
HELIX 34 34 TYR B 280 ILE B 284 5 5
HELIX 35 35 THR B 286 ASN B 298 1 13
HELIX 36 36 PRO B 299 LEU B 302 5 4
HELIX 37 37 LEU B 307 SER B 312 1 6
HELIX 38 38 LEU B 333 ARG B 337 1 5
HELIX 39 39 SER B 338 GLY B 352 1 15
HELIX 40 40 GLY B 352 GLU B 357 1 6
HELIX 41 41 GLY B 360 LEU B 373 1 14
HELIX 42 42 PRO B 374 ASP B 376 5 3
HELIX 43 43 ASP B 397 ASN B 404 1 8
HELIX 44 44 ASP B 409 ASP B 413 5 5
HELIX 45 45 CYS B 421 GLY B 430 1 10
HELIX 46 46 ASN B 436 GLU B 442 5 7
SHEET 1 A 7 VAL A 180 ILE A 184 0
SHEET 2 A 7 TRP A 156 ASN A 160 1 N PHE A 158 O LYS A 181
SHEET 3 A 7 ALA A 123 LEU A 128 1 N THR A 127 O VAL A 157
SHEET 4 A 7 TRP A 242 ARG A 245 1 O TRP A 244 N VAL A 126
SHEET 5 A 7 GLU A 329 ASN A 332 -1 O GLU A 329 N ARG A 245
SHEET 6 A 7 TYR A 271 PHE A 273 -1 N GLY A 272 O ILE A 330
SHEET 7 A 7 ILE A 378 TYR A 380 1 O HIS A 379 N TYR A 271
SHEET 1 B 2 SER A 276 HIS A 278 0
SHEET 2 B 2 CYS A 322 PHE A 324 -1 O HIS A 323 N ILE A 277
SHEET 1 C 2 TYR A 386 HIS A 388 0
SHEET 2 C 2 TYR A 391 ASN A 393 -1 O ASN A 393 N TYR A 386
SHEET 1 D 7 VAL B 180 ILE B 184 0
SHEET 2 D 7 TRP B 156 ASN B 160 1 N PHE B 158 O LYS B 181
SHEET 3 D 7 ALA B 123 LEU B 128 1 N THR B 127 O LEU B 159
SHEET 4 D 7 TRP B 242 ARG B 245 1 O TRP B 244 N VAL B 126
SHEET 5 D 7 GLU B 329 ASN B 332 -1 O GLU B 329 N ARG B 245
SHEET 6 D 7 TYR B 271 PHE B 273 -1 N GLY B 272 O ILE B 330
SHEET 7 D 7 ILE B 378 TYR B 380 1 O HIS B 379 N TYR B 271
SHEET 1 E 3 LYS B 251 LEU B 252 0
SHEET 2 E 3 TYR B 386 HIS B 388 -1 O HIS B 387 N LYS B 251
SHEET 3 E 3 TYR B 391 ASN B 393 -1 O ASN B 393 N TYR B 386
SHEET 1 F 2 SER B 276 HIS B 278 0
SHEET 2 F 2 CYS B 322 PHE B 324 -1 O HIS B 323 N ILE B 277
SSBOND 1 CYS A 254 CYS A 406 1555 1555 2.04
SSBOND 2 CYS A 322 CYS A 421 1555 1555 2.03
SSBOND 3 CYS A 394 CYS A 408 1555 1555 2.04
SSBOND 4 CYS B 254 CYS B 406 1555 1555 2.05
SSBOND 5 CYS B 322 CYS B 421 1555 1555 2.03
SSBOND 6 CYS B 394 CYS B 408 1555 1555 2.03
LINK ND2 ASN A 197 C1 NAG C 1 1555 1555 1.45
LINK ND2 ASN B 197 C1 NAG D 1 1555 1555 1.45
LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38
LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.39
LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.41
LINK O6 BMA C 3 C1 MAN C 6 1555 1555 1.40
LINK O2 MAN C 4 C1 MAN C 5 1555 1555 1.40
LINK O3 MAN C 6 C1 MAN C 7 1555 1555 1.39
LINK O6 MAN C 6 C1 MAN C 8 1555 1555 1.40
LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38
LINK OE1 GLU A 247 MN MN A 909 1555 1555 2.16
LINK NE2 HIS A 388 MN MN A 909 1555 1555 2.15
LINK O2B GDP A 904 MN MN A 909 1555 1555 2.28
LINK O1A GDP A 904 MN MN A 909 1555 1555 2.22
LINK MN MN A 909 O HOH A 939 1555 1555 2.34
LINK MN MN A 909 O HOH A1156 1555 1555 2.36
LINK OE1 GLU B 247 MN MN B 906 1555 1555 2.27
LINK NE2 HIS B 388 MN MN B 906 1555 1555 2.19
LINK O2B GDP B 905 MN MN B 906 1555 1555 2.26
LINK O1A GDP B 905 MN MN B 906 1555 1555 2.22
LINK MN MN B 906 O HOH B1140 1555 1555 2.32
LINK MN MN B 906 O HOH B1141 1555 1555 2.31
CISPEP 1 PRO A 389 PRO A 390 0 0.31
CISPEP 2 PRO B 389 PRO B 390 0 0.21
CRYST1 60.694 101.068 62.036 90.00 98.81 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016476 0.000000 0.002554 0.00000
SCALE2 0.000000 0.009894 0.000000 0.00000
SCALE3 0.000000 0.000000 0.016312 0.00000