data_1S69 # _entry.id 1S69 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1S69 pdb_00001s69 10.2210/pdb1s69/pdb RCSB RCSB021419 ? ? WWPDB D_1000021419 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1S6A _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1S69 _pdbx_database_status.recvd_initial_deposition_date 2004-01-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Trent III, J.T.' 1 'Kundu, S.' 2 'Hoy, J.A.' 3 'Hargrove, M.S.' 4 # _citation.id primary _citation.title ;Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 341 _citation.page_first 1097 _citation.page_last 1108 _citation.year 2004 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15289104 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.05.070 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trent III, J.T.' 1 ? primary 'Kundu, S.' 2 ? primary 'Hoy, J.A.' 3 ? primary 'Hargrove, M.S.' 4 ? # _cell.entry_id 1S69 _cell.length_a 84.060 _cell.length_b 84.060 _cell.length_c 64.620 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S69 _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Cyanoglobin 13888.623 1 ? ? ? ? 2 non-polymer syn 'CITRATE ANION' 189.100 1 ? ? ? ? 3 non-polymer syn 'CYANIDE ION' 26.017 1 ? ? ? ? 4 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 5 water nat water 18.015 148 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Hemoglobin, Hb' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSTLYEKLGGTTAVDLAVDKFYERVLQDDRIKHFFADVDMAKQRAHQKAFLTYAFGGTDKYDGRYMREAHKELVENHGLN GEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGAPAHKRDVLNQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MSTLYEKLGGTTAVDLAVDKFYERVLQDDRIKHFFADVDMAKQRAHQKAFLTYAFGGTDKYDGRYMREAHKELVENHGLN GEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGAPAHKRDVLNQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 THR n 1 4 LEU n 1 5 TYR n 1 6 GLU n 1 7 LYS n 1 8 LEU n 1 9 GLY n 1 10 GLY n 1 11 THR n 1 12 THR n 1 13 ALA n 1 14 VAL n 1 15 ASP n 1 16 LEU n 1 17 ALA n 1 18 VAL n 1 19 ASP n 1 20 LYS n 1 21 PHE n 1 22 TYR n 1 23 GLU n 1 24 ARG n 1 25 VAL n 1 26 LEU n 1 27 GLN n 1 28 ASP n 1 29 ASP n 1 30 ARG n 1 31 ILE n 1 32 LYS n 1 33 HIS n 1 34 PHE n 1 35 PHE n 1 36 ALA n 1 37 ASP n 1 38 VAL n 1 39 ASP n 1 40 MET n 1 41 ALA n 1 42 LYS n 1 43 GLN n 1 44 ARG n 1 45 ALA n 1 46 HIS n 1 47 GLN n 1 48 LYS n 1 49 ALA n 1 50 PHE n 1 51 LEU n 1 52 THR n 1 53 TYR n 1 54 ALA n 1 55 PHE n 1 56 GLY n 1 57 GLY n 1 58 THR n 1 59 ASP n 1 60 LYS n 1 61 TYR n 1 62 ASP n 1 63 GLY n 1 64 ARG n 1 65 TYR n 1 66 MET n 1 67 ARG n 1 68 GLU n 1 69 ALA n 1 70 HIS n 1 71 LYS n 1 72 GLU n 1 73 LEU n 1 74 VAL n 1 75 GLU n 1 76 ASN n 1 77 HIS n 1 78 GLY n 1 79 LEU n 1 80 ASN n 1 81 GLY n 1 82 GLU n 1 83 HIS n 1 84 PHE n 1 85 ASP n 1 86 ALA n 1 87 VAL n 1 88 ALA n 1 89 GLU n 1 90 ASP n 1 91 LEU n 1 92 LEU n 1 93 ALA n 1 94 THR n 1 95 LEU n 1 96 LYS n 1 97 GLU n 1 98 MET n 1 99 GLY n 1 100 VAL n 1 101 PRO n 1 102 GLU n 1 103 ASP n 1 104 LEU n 1 105 ILE n 1 106 ALA n 1 107 GLU n 1 108 VAL n 1 109 ALA n 1 110 ALA n 1 111 VAL n 1 112 ALA n 1 113 GLY n 1 114 ALA n 1 115 PRO n 1 116 ALA n 1 117 HIS n 1 118 LYS n 1 119 ARG n 1 120 ASP n 1 121 VAL n 1 122 LEU n 1 123 ASN n 1 124 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Synechocystis _entity_src_gen.pdbx_gene_src_gene 'GLBN, SLR2097' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'PCC 6803' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Synechocystis sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1148 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28c _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GLBN_SYNY3 _struct_ref.pdbx_db_accession P73925 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSTLYEKLGGTTAVDLAVDKFYERVLQDDRIKHFFADVDMAKQRAHQKAFLTYAFGGTDKYDGRYMREAHKELVENHGLN GEHFDAVAEDLLATLKEMGVPEDLIAEVAAVAGAPAHKRDVLNQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1S69 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P73925 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 124 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYN non-polymer . 'CYANIDE ION' ? 'C N -1' 26.017 FLC non-polymer . 'CITRATE ANION' ? 'C6 H5 O7 -3' 189.100 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1S69 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 68.77 _exptl_crystal.description 'Friedel pairs were used.' _exptl_crystal.density_Matthews 3.97 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;1.5M sodium citrate, 0.2M ammonium citrate, 20% sucrose, 3% dioxane, 25mM sodium cyanide, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'RIGAKU RAXIS IV' 2002-10-01 ? 2 'IMAGE PLATE' 'RIGAKU RAXIS IV' 2002-10-02 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'ROTATING ANODE' RIGAKU ? ? ? 1.5418 2 'ROTATING ANODE' RIGAKU ? ? ? 1.5418 # _reflns.entry_id 1S69 _reflns.observed_criterion_sigma_F 3.0 _reflns.observed_criterion_sigma_I 3.0 _reflns.d_resolution_high 1.68 _reflns.d_resolution_low 32.49 _reflns.number_all ? _reflns.number_obs 37950 _reflns.percent_possible_obs 75.2 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.92 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 1.68 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 5.0 _reflns_shell.Rmerge_I_obs 0.343 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 1.02 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 254 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.entry_id 1S69 _refine.ls_number_reflns_obs 37837 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 3.0 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.5 _refine.ls_d_res_high 1.68 _refine.ls_percent_reflns_obs 80.46 _refine.ls_R_factor_obs 0.1927 _refine.ls_R_factor_all 0.19921 _refine.ls_R_factor_R_work 0.19236 _refine.ls_R_factor_R_free 0.19921 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1053 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 28.241 _refine.aniso_B[1][1] -0.38 _refine.aniso_B[2][2] -0.38 _refine.aniso_B[3][3] 0.75 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'Friedel pairs were used.' _refine.pdbx_starting_model 'PDB entry 1dly' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.099 _refine.pdbx_overall_ESU_R_Free 0.090 _refine.overall_SU_ML 0.070 _refine.overall_SU_B 2.564 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 969 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 148 _refine_hist.number_atoms_total 1175 _refine_hist.d_res_high 1.68 _refine_hist.d_res_low 32.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.021 ? 1050 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.809 2.088 ? 1429 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.294 5.000 ? 122 'X-RAY DIFFRACTION' ? r_chiral_restr 0.121 0.200 ? 145 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 820 'X-RAY DIFFRACTION' ? r_nbd_refined 0.229 0.200 ? 547 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.197 0.200 ? 130 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.134 0.200 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.217 0.200 ? 17 'X-RAY DIFFRACTION' ? r_mcbond_it 1.019 1.500 ? 610 'X-RAY DIFFRACTION' ? r_mcangle_it 1.927 2.000 ? 967 'X-RAY DIFFRACTION' ? r_scbond_it 3.442 3.000 ? 440 'X-RAY DIFFRACTION' ? r_scangle_it 5.658 4.500 ? 462 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.680 _refine_ls_shell.d_res_low 1.723 _refine_ls_shell.number_reflns_R_work 121 _refine_ls_shell.R_factor_R_work 0.437 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.457 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 9 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1S69 _struct.title ;The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with cyanide ligand ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1S69 _struct_keywords.pdbx_keywords 'OXYGEN STORAGE/TRANSPORT' _struct_keywords.text ;2 on 2 helical fold, globin, heme, iron, hemoglobin, cyanobacteria, oxygen binding, hexacoordinate, truncated, OXYGEN STORAGE-TRANSPORT COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 3 ? GLY A 9 ? THR A 3 GLY A 9 1 ? 7 HELX_P HELX_P2 2 GLY A 9 ? GLN A 27 ? GLY A 9 GLN A 27 1 ? 19 HELX_P HELX_P3 3 ILE A 31 ? ALA A 36 ? ILE A 31 ALA A 36 5 ? 6 HELX_P HELX_P4 4 ASP A 39 ? PHE A 55 ? ASP A 39 PHE A 55 1 ? 17 HELX_P HELX_P5 5 TYR A 65 ? GLY A 78 ? TYR A 65 GLY A 78 1 ? 14 HELX_P HELX_P6 6 ASN A 80 ? GLY A 99 ? ASN A 80 GLY A 99 1 ? 20 HELX_P HELX_P7 7 PRO A 101 ? ALA A 114 ? PRO A 101 ALA A 114 1 ? 14 HELX_P HELX_P8 8 ALA A 114 ? LEU A 122 ? ALA A 114 LEU A 122 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A HIS 117 NE2 ? ? ? 1_555 D HEM . CAB ? ? A HIS 117 A HEM 125 1_555 ? ? ? ? ? ? ? 2.023 ? ? metalc1 metalc ? ? A HIS 70 NE2 ? ? ? 1_555 D HEM . FE ? ? A HIS 70 A HEM 125 1_555 ? ? ? ? ? ? ? 2.093 ? ? metalc2 metalc ? ? D HEM . FE ? ? ? 1_555 C CYN . C ? ? A HEM 125 A CYN 126 1_555 ? ? ? ? ? ? ? 2.053 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FLC 227 ? 16 'BINDING SITE FOR RESIDUE FLC A 227' AC2 Software A CYN 126 ? 4 'BINDING SITE FOR RESIDUE CYN A 126' AC3 Software A HEM 125 ? 22 'BINDING SITE FOR RESIDUE HEM A 125' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 PHE A 50 ? PHE A 50 . ? 1_555 ? 2 AC1 16 TYR A 53 ? TYR A 53 . ? 1_555 ? 3 AC1 16 TYR A 65 ? TYR A 65 . ? 1_555 ? 4 AC1 16 MET A 66 ? MET A 66 . ? 1_555 ? 5 AC1 16 HIS A 77 ? HIS A 77 . ? 8_555 ? 6 AC1 16 ALA A 116 ? ALA A 116 . ? 1_555 ? 7 AC1 16 HIS A 117 ? HIS A 117 . ? 1_555 ? 8 AC1 16 ASP A 120 ? ASP A 120 . ? 1_555 ? 9 AC1 16 HOH E . ? HOH A 247 . ? 1_555 ? 10 AC1 16 HOH E . ? HOH A 280 . ? 1_555 ? 11 AC1 16 HOH E . ? HOH A 282 . ? 1_555 ? 12 AC1 16 HOH E . ? HOH A 306 . ? 1_555 ? 13 AC1 16 HOH E . ? HOH A 321 . ? 1_555 ? 14 AC1 16 HOH E . ? HOH A 339 . ? 1_555 ? 15 AC1 16 HOH E . ? HOH A 360 . ? 1_555 ? 16 AC1 16 HOH E . ? HOH A 375 . ? 1_555 ? 17 AC2 4 TYR A 22 ? TYR A 22 . ? 1_555 ? 18 AC2 4 GLN A 43 ? GLN A 43 . ? 1_555 ? 19 AC2 4 GLN A 47 ? GLN A 47 . ? 1_555 ? 20 AC2 4 HEM D . ? HEM A 125 . ? 1_555 ? 21 AC3 22 ILE A 31 ? ILE A 31 . ? 1_555 ? 22 AC3 22 PHE A 34 ? PHE A 34 . ? 1_555 ? 23 AC3 22 PHE A 35 ? PHE A 35 . ? 1_555 ? 24 AC3 22 VAL A 38 ? VAL A 38 . ? 1_555 ? 25 AC3 22 GLN A 43 ? GLN A 43 . ? 1_555 ? 26 AC3 22 HIS A 46 ? HIS A 46 . ? 1_555 ? 27 AC3 22 GLN A 47 ? GLN A 47 . ? 1_555 ? 28 AC3 22 PHE A 50 ? PHE A 50 . ? 1_555 ? 29 AC3 22 TYR A 61 ? TYR A 61 . ? 1_555 ? 30 AC3 22 GLY A 63 ? GLY A 63 . ? 1_555 ? 31 AC3 22 ARG A 64 ? ARG A 64 . ? 1_555 ? 32 AC3 22 MET A 66 ? MET A 66 . ? 1_555 ? 33 AC3 22 HIS A 70 ? HIS A 70 . ? 1_555 ? 34 AC3 22 LEU A 73 ? LEU A 73 . ? 1_555 ? 35 AC3 22 LEU A 79 ? LEU A 79 . ? 1_555 ? 36 AC3 22 PHE A 84 ? PHE A 84 . ? 1_555 ? 37 AC3 22 VAL A 87 ? VAL A 87 . ? 1_555 ? 38 AC3 22 HIS A 117 ? HIS A 117 . ? 1_555 ? 39 AC3 22 CYN C . ? CYN A 126 . ? 1_555 ? 40 AC3 22 HOH E . ? HOH A 302 . ? 1_555 ? 41 AC3 22 HOH E . ? HOH A 322 . ? 1_555 ? 42 AC3 22 HOH E . ? HOH A 365 . ? 1_555 ? # _database_PDB_matrix.entry_id 1S69 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1S69 _atom_sites.fract_transf_matrix[1][1] 0.011896 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011896 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015475 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 MET 40 40 40 MET MET A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 GLN 124 124 124 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FLC 1 227 127 FLC FLC A . C 3 CYN 1 126 126 CYN CN A . D 4 HEM 1 125 125 HEM HEM A . E 5 HOH 1 228 1 HOH HOH A . E 5 HOH 2 229 2 HOH HOH A . E 5 HOH 3 230 3 HOH HOH A . E 5 HOH 4 231 4 HOH HOH A . E 5 HOH 5 232 5 HOH HOH A . E 5 HOH 6 233 6 HOH HOH A . E 5 HOH 7 234 7 HOH HOH A . E 5 HOH 8 235 8 HOH HOH A . E 5 HOH 9 236 9 HOH HOH A . E 5 HOH 10 237 10 HOH HOH A . E 5 HOH 11 238 11 HOH HOH A . E 5 HOH 12 239 12 HOH HOH A . E 5 HOH 13 240 13 HOH HOH A . E 5 HOH 14 241 14 HOH HOH A . E 5 HOH 15 242 15 HOH HOH A . E 5 HOH 16 243 16 HOH HOH A . E 5 HOH 17 244 17 HOH HOH A . E 5 HOH 18 245 18 HOH HOH A . E 5 HOH 19 246 19 HOH HOH A . E 5 HOH 20 247 20 HOH HOH A . E 5 HOH 21 248 21 HOH HOH A . E 5 HOH 22 249 22 HOH HOH A . E 5 HOH 23 250 23 HOH HOH A . E 5 HOH 24 251 24 HOH HOH A . E 5 HOH 25 252 25 HOH HOH A . E 5 HOH 26 253 26 HOH HOH A . E 5 HOH 27 254 27 HOH HOH A . E 5 HOH 28 255 28 HOH HOH A . E 5 HOH 29 256 29 HOH HOH A . E 5 HOH 30 257 30 HOH HOH A . E 5 HOH 31 258 31 HOH HOH A . E 5 HOH 32 259 32 HOH HOH A . E 5 HOH 33 260 33 HOH HOH A . E 5 HOH 34 261 34 HOH HOH A . E 5 HOH 35 262 35 HOH HOH A . E 5 HOH 36 263 36 HOH HOH A . E 5 HOH 37 264 37 HOH HOH A . E 5 HOH 38 265 38 HOH HOH A . E 5 HOH 39 266 39 HOH HOH A . E 5 HOH 40 267 40 HOH HOH A . E 5 HOH 41 268 41 HOH HOH A . E 5 HOH 42 269 42 HOH HOH A . E 5 HOH 43 270 43 HOH HOH A . E 5 HOH 44 271 44 HOH HOH A . E 5 HOH 45 272 45 HOH HOH A . E 5 HOH 46 273 46 HOH HOH A . E 5 HOH 47 274 47 HOH HOH A . E 5 HOH 48 275 48 HOH HOH A . E 5 HOH 49 276 49 HOH HOH A . E 5 HOH 50 277 50 HOH HOH A . E 5 HOH 51 278 51 HOH HOH A . E 5 HOH 52 279 52 HOH HOH A . E 5 HOH 53 280 53 HOH HOH A . E 5 HOH 54 281 54 HOH HOH A . E 5 HOH 55 282 55 HOH HOH A . E 5 HOH 56 283 56 HOH HOH A . E 5 HOH 57 284 57 HOH HOH A . E 5 HOH 58 285 58 HOH HOH A . E 5 HOH 59 286 59 HOH HOH A . E 5 HOH 60 287 60 HOH HOH A . E 5 HOH 61 288 61 HOH HOH A . E 5 HOH 62 289 62 HOH HOH A . E 5 HOH 63 290 63 HOH HOH A . E 5 HOH 64 291 64 HOH HOH A . E 5 HOH 65 292 65 HOH HOH A . E 5 HOH 66 293 66 HOH HOH A . E 5 HOH 67 294 67 HOH HOH A . E 5 HOH 68 295 68 HOH HOH A . E 5 HOH 69 296 69 HOH HOH A . E 5 HOH 70 297 70 HOH HOH A . E 5 HOH 71 298 71 HOH HOH A . E 5 HOH 72 299 72 HOH HOH A . E 5 HOH 73 300 73 HOH HOH A . E 5 HOH 74 301 74 HOH HOH A . E 5 HOH 75 302 75 HOH HOH A . E 5 HOH 76 303 76 HOH HOH A . E 5 HOH 77 304 77 HOH HOH A . E 5 HOH 78 305 78 HOH HOH A . E 5 HOH 79 306 79 HOH HOH A . E 5 HOH 80 307 80 HOH HOH A . E 5 HOH 81 308 81 HOH HOH A . E 5 HOH 82 309 82 HOH HOH A . E 5 HOH 83 310 83 HOH HOH A . E 5 HOH 84 311 84 HOH HOH A . E 5 HOH 85 312 85 HOH HOH A . E 5 HOH 86 313 86 HOH HOH A . E 5 HOH 87 314 87 HOH HOH A . E 5 HOH 88 315 88 HOH HOH A . E 5 HOH 89 316 89 HOH HOH A . E 5 HOH 90 317 90 HOH HOH A . E 5 HOH 91 318 91 HOH HOH A . E 5 HOH 92 319 92 HOH HOH A . E 5 HOH 93 320 93 HOH HOH A . E 5 HOH 94 321 94 HOH HOH A . E 5 HOH 95 322 95 HOH HOH A . E 5 HOH 96 323 96 HOH HOH A . E 5 HOH 97 324 97 HOH HOH A . E 5 HOH 98 325 98 HOH HOH A . E 5 HOH 99 326 99 HOH HOH A . E 5 HOH 100 327 100 HOH HOH A . E 5 HOH 101 328 101 HOH HOH A . E 5 HOH 102 329 102 HOH HOH A . E 5 HOH 103 330 103 HOH HOH A . E 5 HOH 104 331 104 HOH HOH A . E 5 HOH 105 332 105 HOH HOH A . E 5 HOH 106 333 106 HOH HOH A . E 5 HOH 107 334 107 HOH HOH A . E 5 HOH 108 335 108 HOH HOH A . E 5 HOH 109 336 109 HOH HOH A . E 5 HOH 110 337 110 HOH HOH A . E 5 HOH 111 338 111 HOH HOH A . E 5 HOH 112 339 112 HOH HOH A . E 5 HOH 113 340 113 HOH HOH A . E 5 HOH 114 341 114 HOH HOH A . E 5 HOH 115 342 115 HOH HOH A . E 5 HOH 116 343 116 HOH HOH A . E 5 HOH 117 344 117 HOH HOH A . E 5 HOH 118 345 118 HOH HOH A . E 5 HOH 119 346 119 HOH HOH A . E 5 HOH 120 347 120 HOH HOH A . E 5 HOH 121 348 121 HOH HOH A . E 5 HOH 122 349 122 HOH HOH A . E 5 HOH 123 350 123 HOH HOH A . E 5 HOH 124 351 124 HOH HOH A . E 5 HOH 125 352 125 HOH HOH A . E 5 HOH 126 353 126 HOH HOH A . E 5 HOH 127 354 127 HOH HOH A . E 5 HOH 128 355 128 HOH HOH A . E 5 HOH 129 356 129 HOH HOH A . E 5 HOH 130 357 130 HOH HOH A . E 5 HOH 131 358 131 HOH HOH A . E 5 HOH 132 359 132 HOH HOH A . E 5 HOH 133 360 133 HOH HOH A . E 5 HOH 134 361 134 HOH HOH A . E 5 HOH 135 362 135 HOH HOH A . E 5 HOH 136 363 136 HOH HOH A . E 5 HOH 137 364 137 HOH HOH A . E 5 HOH 138 365 138 HOH HOH A . E 5 HOH 139 366 139 HOH HOH A . E 5 HOH 140 367 140 HOH HOH A . E 5 HOH 141 368 141 HOH HOH A . E 5 HOH 142 369 142 HOH HOH A . E 5 HOH 143 370 143 HOH HOH A . E 5 HOH 144 371 144 HOH HOH A . E 5 HOH 145 372 145 HOH HOH A . E 5 HOH 146 373 146 HOH HOH A . E 5 HOH 147 374 147 HOH HOH A . E 5 HOH 148 375 148 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 70 ? A HIS 70 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 NA ? D HEM . ? A HEM 125 ? 1_555 92.0 ? 2 NE2 ? A HIS 70 ? A HIS 70 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 NB ? D HEM . ? A HEM 125 ? 1_555 91.5 ? 3 NA ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 NB ? D HEM . ? A HEM 125 ? 1_555 90.3 ? 4 NE2 ? A HIS 70 ? A HIS 70 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 NC ? D HEM . ? A HEM 125 ? 1_555 89.7 ? 5 NA ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 NC ? D HEM . ? A HEM 125 ? 1_555 177.2 ? 6 NB ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 NC ? D HEM . ? A HEM 125 ? 1_555 87.5 ? 7 NE2 ? A HIS 70 ? A HIS 70 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 ND ? D HEM . ? A HEM 125 ? 1_555 86.8 ? 8 NA ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 ND ? D HEM . ? A HEM 125 ? 1_555 90.6 ? 9 NB ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 ND ? D HEM . ? A HEM 125 ? 1_555 178.1 ? 10 NC ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 ND ? D HEM . ? A HEM 125 ? 1_555 91.7 ? 11 NE2 ? A HIS 70 ? A HIS 70 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 C ? C CYN . ? A CYN 126 ? 1_555 177.7 ? 12 NA ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 C ? C CYN . ? A CYN 126 ? 1_555 88.9 ? 13 NB ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 C ? C CYN . ? A CYN 126 ? 1_555 90.6 ? 14 NC ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 C ? C CYN . ? A CYN 126 ? 1_555 89.5 ? 15 ND ? D HEM . ? A HEM 125 ? 1_555 FE ? D HEM . ? A HEM 125 ? 1_555 C ? C CYN . ? A CYN 126 ? 1_555 91.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-21 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_conn_type 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.conn_type_id' 4 4 'Structure model' '_struct_conn.id' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn_type.id' 19 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 20 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 21 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 CRYSTAL 'data reduction' VIEW ? 2 d*TREK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 263 ? ? O A HOH 332 ? ? 2.08 2 1 O A HOH 253 ? ? O A HOH 319 ? ? 2.11 3 1 O A HOH 298 ? ? O A HOH 330 ? ? 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 289 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 327 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_554 _pdbx_validate_symm_contact.dist 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 19 ? ? CG A ASP 19 ? ? OD1 A ASP 19 ? ? 123.76 118.30 5.46 0.90 N 2 1 CB A LEU 26 ? ? CG A LEU 26 ? ? CD1 A LEU 26 ? ? 121.63 111.00 10.63 1.70 N 3 1 CB A ASP 37 ? ? CG A ASP 37 ? ? OD2 A ASP 37 ? ? 127.47 118.30 9.17 0.90 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ILE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 31 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -141.17 _pdbx_validate_torsion.psi -9.19 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYN C C N N 74 CYN N N N N 75 FLC CAC C N N 76 FLC CA C N N 77 FLC CB C N N 78 FLC CBC C N N 79 FLC CG C N N 80 FLC CGC C N N 81 FLC OA1 O N N 82 FLC OA2 O N N 83 FLC OB1 O N N 84 FLC OB2 O N N 85 FLC OG1 O N N 86 FLC OG2 O N N 87 FLC OHB O N N 88 FLC HA1 H N N 89 FLC HA2 H N N 90 FLC HG1 H N N 91 FLC HG2 H N N 92 FLC HOB H N N 93 GLN N N N N 94 GLN CA C N S 95 GLN C C N N 96 GLN O O N N 97 GLN CB C N N 98 GLN CG C N N 99 GLN CD C N N 100 GLN OE1 O N N 101 GLN NE2 N N N 102 GLN OXT O N N 103 GLN H H N N 104 GLN H2 H N N 105 GLN HA H N N 106 GLN HB2 H N N 107 GLN HB3 H N N 108 GLN HG2 H N N 109 GLN HG3 H N N 110 GLN HE21 H N N 111 GLN HE22 H N N 112 GLN HXT H N N 113 GLU N N N N 114 GLU CA C N S 115 GLU C C N N 116 GLU O O N N 117 GLU CB C N N 118 GLU CG C N N 119 GLU CD C N N 120 GLU OE1 O N N 121 GLU OE2 O N N 122 GLU OXT O N N 123 GLU H H N N 124 GLU H2 H N N 125 GLU HA H N N 126 GLU HB2 H N N 127 GLU HB3 H N N 128 GLU HG2 H N N 129 GLU HG3 H N N 130 GLU HE2 H N N 131 GLU HXT H N N 132 GLY N N N N 133 GLY CA C N N 134 GLY C C N N 135 GLY O O N N 136 GLY OXT O N N 137 GLY H H N N 138 GLY H2 H N N 139 GLY HA2 H N N 140 GLY HA3 H N N 141 GLY HXT H N N 142 HEM CHA C N N 143 HEM CHB C N N 144 HEM CHC C N N 145 HEM CHD C N N 146 HEM C1A C Y N 147 HEM C2A C Y N 148 HEM C3A C Y N 149 HEM C4A C Y N 150 HEM CMA C N N 151 HEM CAA C N N 152 HEM CBA C N N 153 HEM CGA C N N 154 HEM O1A O N N 155 HEM O2A O N N 156 HEM C1B C N N 157 HEM C2B C N N 158 HEM C3B C N N 159 HEM C4B C N N 160 HEM CMB C N N 161 HEM CAB C N N 162 HEM CBB C N N 163 HEM C1C C Y N 164 HEM C2C C Y N 165 HEM C3C C Y N 166 HEM C4C C Y N 167 HEM CMC C N N 168 HEM CAC C N N 169 HEM CBC C N N 170 HEM C1D C N N 171 HEM C2D C N N 172 HEM C3D C N N 173 HEM C4D C N N 174 HEM CMD C N N 175 HEM CAD C N N 176 HEM CBD C N N 177 HEM CGD C N N 178 HEM O1D O N N 179 HEM O2D O N N 180 HEM NA N Y N 181 HEM NB N N N 182 HEM NC N Y N 183 HEM ND N N N 184 HEM FE FE N N 185 HEM HHB H N N 186 HEM HHC H N N 187 HEM HHD H N N 188 HEM HMA H N N 189 HEM HMAA H N N 190 HEM HMAB H N N 191 HEM HAA H N N 192 HEM HAAA H N N 193 HEM HBA H N N 194 HEM HBAA H N N 195 HEM HMB H N N 196 HEM HMBA H N N 197 HEM HMBB H N N 198 HEM HAB H N N 199 HEM HBB H N N 200 HEM HBBA H N N 201 HEM HMC H N N 202 HEM HMCA H N N 203 HEM HMCB H N N 204 HEM HAC H N N 205 HEM HBC H N N 206 HEM HBCA H N N 207 HEM HMD H N N 208 HEM HMDA H N N 209 HEM HMDB H N N 210 HEM HAD H N N 211 HEM HADA H N N 212 HEM HBD H N N 213 HEM HBDA H N N 214 HEM H2A H N N 215 HEM H2D H N N 216 HEM HHA H N N 217 HIS N N N N 218 HIS CA C N S 219 HIS C C N N 220 HIS O O N N 221 HIS CB C N N 222 HIS CG C Y N 223 HIS ND1 N Y N 224 HIS CD2 C Y N 225 HIS CE1 C Y N 226 HIS NE2 N Y N 227 HIS OXT O N N 228 HIS H H N N 229 HIS H2 H N N 230 HIS HA H N N 231 HIS HB2 H N N 232 HIS HB3 H N N 233 HIS HD1 H N N 234 HIS HD2 H N N 235 HIS HE1 H N N 236 HIS HE2 H N N 237 HIS HXT H N N 238 HOH O O N N 239 HOH H1 H N N 240 HOH H2 H N N 241 ILE N N N N 242 ILE CA C N S 243 ILE C C N N 244 ILE O O N N 245 ILE CB C N S 246 ILE CG1 C N N 247 ILE CG2 C N N 248 ILE CD1 C N N 249 ILE OXT O N N 250 ILE H H N N 251 ILE H2 H N N 252 ILE HA H N N 253 ILE HB H N N 254 ILE HG12 H N N 255 ILE HG13 H N N 256 ILE HG21 H N N 257 ILE HG22 H N N 258 ILE HG23 H N N 259 ILE HD11 H N N 260 ILE HD12 H N N 261 ILE HD13 H N N 262 ILE HXT H N N 263 LEU N N N N 264 LEU CA C N S 265 LEU C C N N 266 LEU O O N N 267 LEU CB C N N 268 LEU CG C N N 269 LEU CD1 C N N 270 LEU CD2 C N N 271 LEU OXT O N N 272 LEU H H N N 273 LEU H2 H N N 274 LEU HA H N N 275 LEU HB2 H N N 276 LEU HB3 H N N 277 LEU HG H N N 278 LEU HD11 H N N 279 LEU HD12 H N N 280 LEU HD13 H N N 281 LEU HD21 H N N 282 LEU HD22 H N N 283 LEU HD23 H N N 284 LEU HXT H N N 285 LYS N N N N 286 LYS CA C N S 287 LYS C C N N 288 LYS O O N N 289 LYS CB C N N 290 LYS CG C N N 291 LYS CD C N N 292 LYS CE C N N 293 LYS NZ N N N 294 LYS OXT O N N 295 LYS H H N N 296 LYS H2 H N N 297 LYS HA H N N 298 LYS HB2 H N N 299 LYS HB3 H N N 300 LYS HG2 H N N 301 LYS HG3 H N N 302 LYS HD2 H N N 303 LYS HD3 H N N 304 LYS HE2 H N N 305 LYS HE3 H N N 306 LYS HZ1 H N N 307 LYS HZ2 H N N 308 LYS HZ3 H N N 309 LYS HXT H N N 310 MET N N N N 311 MET CA C N S 312 MET C C N N 313 MET O O N N 314 MET CB C N N 315 MET CG C N N 316 MET SD S N N 317 MET CE C N N 318 MET OXT O N N 319 MET H H N N 320 MET H2 H N N 321 MET HA H N N 322 MET HB2 H N N 323 MET HB3 H N N 324 MET HG2 H N N 325 MET HG3 H N N 326 MET HE1 H N N 327 MET HE2 H N N 328 MET HE3 H N N 329 MET HXT H N N 330 PHE N N N N 331 PHE CA C N S 332 PHE C C N N 333 PHE O O N N 334 PHE CB C N N 335 PHE CG C Y N 336 PHE CD1 C Y N 337 PHE CD2 C Y N 338 PHE CE1 C Y N 339 PHE CE2 C Y N 340 PHE CZ C Y N 341 PHE OXT O N N 342 PHE H H N N 343 PHE H2 H N N 344 PHE HA H N N 345 PHE HB2 H N N 346 PHE HB3 H N N 347 PHE HD1 H N N 348 PHE HD2 H N N 349 PHE HE1 H N N 350 PHE HE2 H N N 351 PHE HZ H N N 352 PHE HXT H N N 353 PRO N N N N 354 PRO CA C N S 355 PRO C C N N 356 PRO O O N N 357 PRO CB C N N 358 PRO CG C N N 359 PRO CD C N N 360 PRO OXT O N N 361 PRO H H N N 362 PRO HA H N N 363 PRO HB2 H N N 364 PRO HB3 H N N 365 PRO HG2 H N N 366 PRO HG3 H N N 367 PRO HD2 H N N 368 PRO HD3 H N N 369 PRO HXT H N N 370 SER N N N N 371 SER CA C N S 372 SER C C N N 373 SER O O N N 374 SER CB C N N 375 SER OG O N N 376 SER OXT O N N 377 SER H H N N 378 SER H2 H N N 379 SER HA H N N 380 SER HB2 H N N 381 SER HB3 H N N 382 SER HG H N N 383 SER HXT H N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TYR N N N N 402 TYR CA C N S 403 TYR C C N N 404 TYR O O N N 405 TYR CB C N N 406 TYR CG C Y N 407 TYR CD1 C Y N 408 TYR CD2 C Y N 409 TYR CE1 C Y N 410 TYR CE2 C Y N 411 TYR CZ C Y N 412 TYR OH O N N 413 TYR OXT O N N 414 TYR H H N N 415 TYR H2 H N N 416 TYR HA H N N 417 TYR HB2 H N N 418 TYR HB3 H N N 419 TYR HD1 H N N 420 TYR HD2 H N N 421 TYR HE1 H N N 422 TYR HE2 H N N 423 TYR HH H N N 424 TYR HXT H N N 425 VAL N N N N 426 VAL CA C N S 427 VAL C C N N 428 VAL O O N N 429 VAL CB C N N 430 VAL CG1 C N N 431 VAL CG2 C N N 432 VAL OXT O N N 433 VAL H H N N 434 VAL H2 H N N 435 VAL HA H N N 436 VAL HB H N N 437 VAL HG11 H N N 438 VAL HG12 H N N 439 VAL HG13 H N N 440 VAL HG21 H N N 441 VAL HG22 H N N 442 VAL HG23 H N N 443 VAL HXT H N N 444 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYN C N trip N N 70 FLC CAC CA sing N N 71 FLC CAC OA1 doub N N 72 FLC CAC OA2 sing N N 73 FLC CA CB sing N N 74 FLC CA HA1 sing N N 75 FLC CA HA2 sing N N 76 FLC CB CBC sing N N 77 FLC CB CG sing N N 78 FLC CB OHB sing N N 79 FLC CBC OB1 doub N N 80 FLC CBC OB2 sing N N 81 FLC CG CGC sing N N 82 FLC CG HG1 sing N N 83 FLC CG HG2 sing N N 84 FLC CGC OG1 doub N N 85 FLC CGC OG2 sing N N 86 FLC OHB HOB sing N N 87 GLN N CA sing N N 88 GLN N H sing N N 89 GLN N H2 sing N N 90 GLN CA C sing N N 91 GLN CA CB sing N N 92 GLN CA HA sing N N 93 GLN C O doub N N 94 GLN C OXT sing N N 95 GLN CB CG sing N N 96 GLN CB HB2 sing N N 97 GLN CB HB3 sing N N 98 GLN CG CD sing N N 99 GLN CG HG2 sing N N 100 GLN CG HG3 sing N N 101 GLN CD OE1 doub N N 102 GLN CD NE2 sing N N 103 GLN NE2 HE21 sing N N 104 GLN NE2 HE22 sing N N 105 GLN OXT HXT sing N N 106 GLU N CA sing N N 107 GLU N H sing N N 108 GLU N H2 sing N N 109 GLU CA C sing N N 110 GLU CA CB sing N N 111 GLU CA HA sing N N 112 GLU C O doub N N 113 GLU C OXT sing N N 114 GLU CB CG sing N N 115 GLU CB HB2 sing N N 116 GLU CB HB3 sing N N 117 GLU CG CD sing N N 118 GLU CG HG2 sing N N 119 GLU CG HG3 sing N N 120 GLU CD OE1 doub N N 121 GLU CD OE2 sing N N 122 GLU OE2 HE2 sing N N 123 GLU OXT HXT sing N N 124 GLY N CA sing N N 125 GLY N H sing N N 126 GLY N H2 sing N N 127 GLY CA C sing N N 128 GLY CA HA2 sing N N 129 GLY CA HA3 sing N N 130 GLY C O doub N N 131 GLY C OXT sing N N 132 GLY OXT HXT sing N N 133 HEM CHA C1A sing N N 134 HEM CHA C4D doub N N 135 HEM CHA HHA sing N N 136 HEM CHB C4A sing N N 137 HEM CHB C1B doub N N 138 HEM CHB HHB sing N N 139 HEM CHC C4B sing N N 140 HEM CHC C1C doub N N 141 HEM CHC HHC sing N N 142 HEM CHD C4C doub N N 143 HEM CHD C1D sing N N 144 HEM CHD HHD sing N N 145 HEM C1A C2A doub Y N 146 HEM C1A NA sing Y N 147 HEM C2A C3A sing Y N 148 HEM C2A CAA sing N N 149 HEM C3A C4A doub Y N 150 HEM C3A CMA sing N N 151 HEM C4A NA sing Y N 152 HEM CMA HMA sing N N 153 HEM CMA HMAA sing N N 154 HEM CMA HMAB sing N N 155 HEM CAA CBA sing N N 156 HEM CAA HAA sing N N 157 HEM CAA HAAA sing N N 158 HEM CBA CGA sing N N 159 HEM CBA HBA sing N N 160 HEM CBA HBAA sing N N 161 HEM CGA O1A doub N N 162 HEM CGA O2A sing N N 163 HEM C1B C2B sing N N 164 HEM C1B NB sing N N 165 HEM C2B C3B doub N N 166 HEM C2B CMB sing N N 167 HEM C3B C4B sing N N 168 HEM C3B CAB sing N N 169 HEM C4B NB doub N N 170 HEM CMB HMB sing N N 171 HEM CMB HMBA sing N N 172 HEM CMB HMBB sing N N 173 HEM CAB CBB doub N N 174 HEM CAB HAB sing N N 175 HEM CBB HBB sing N N 176 HEM CBB HBBA sing N N 177 HEM C1C C2C sing Y N 178 HEM C1C NC sing Y N 179 HEM C2C C3C doub Y N 180 HEM C2C CMC sing N N 181 HEM C3C C4C sing Y N 182 HEM C3C CAC sing N N 183 HEM C4C NC sing Y N 184 HEM CMC HMC sing N N 185 HEM CMC HMCA sing N N 186 HEM CMC HMCB sing N N 187 HEM CAC CBC doub N N 188 HEM CAC HAC sing N N 189 HEM CBC HBC sing N N 190 HEM CBC HBCA sing N N 191 HEM C1D C2D sing N N 192 HEM C1D ND doub N N 193 HEM C2D C3D doub N N 194 HEM C2D CMD sing N N 195 HEM C3D C4D sing N N 196 HEM C3D CAD sing N N 197 HEM C4D ND sing N N 198 HEM CMD HMD sing N N 199 HEM CMD HMDA sing N N 200 HEM CMD HMDB sing N N 201 HEM CAD CBD sing N N 202 HEM CAD HAD sing N N 203 HEM CAD HADA sing N N 204 HEM CBD CGD sing N N 205 HEM CBD HBD sing N N 206 HEM CBD HBDA sing N N 207 HEM CGD O1D doub N N 208 HEM CGD O2D sing N N 209 HEM O2A H2A sing N N 210 HEM O2D H2D sing N N 211 HEM FE NA sing N N 212 HEM FE NB sing N N 213 HEM FE NC sing N N 214 HEM FE ND sing N N 215 HIS N CA sing N N 216 HIS N H sing N N 217 HIS N H2 sing N N 218 HIS CA C sing N N 219 HIS CA CB sing N N 220 HIS CA HA sing N N 221 HIS C O doub N N 222 HIS C OXT sing N N 223 HIS CB CG sing N N 224 HIS CB HB2 sing N N 225 HIS CB HB3 sing N N 226 HIS CG ND1 sing Y N 227 HIS CG CD2 doub Y N 228 HIS ND1 CE1 doub Y N 229 HIS ND1 HD1 sing N N 230 HIS CD2 NE2 sing Y N 231 HIS CD2 HD2 sing N N 232 HIS CE1 NE2 sing Y N 233 HIS CE1 HE1 sing N N 234 HIS NE2 HE2 sing N N 235 HIS OXT HXT sing N N 236 HOH O H1 sing N N 237 HOH O H2 sing N N 238 ILE N CA sing N N 239 ILE N H sing N N 240 ILE N H2 sing N N 241 ILE CA C sing N N 242 ILE CA CB sing N N 243 ILE CA HA sing N N 244 ILE C O doub N N 245 ILE C OXT sing N N 246 ILE CB CG1 sing N N 247 ILE CB CG2 sing N N 248 ILE CB HB sing N N 249 ILE CG1 CD1 sing N N 250 ILE CG1 HG12 sing N N 251 ILE CG1 HG13 sing N N 252 ILE CG2 HG21 sing N N 253 ILE CG2 HG22 sing N N 254 ILE CG2 HG23 sing N N 255 ILE CD1 HD11 sing N N 256 ILE CD1 HD12 sing N N 257 ILE CD1 HD13 sing N N 258 ILE OXT HXT sing N N 259 LEU N CA sing N N 260 LEU N H sing N N 261 LEU N H2 sing N N 262 LEU CA C sing N N 263 LEU CA CB sing N N 264 LEU CA HA sing N N 265 LEU C O doub N N 266 LEU C OXT sing N N 267 LEU CB CG sing N N 268 LEU CB HB2 sing N N 269 LEU CB HB3 sing N N 270 LEU CG CD1 sing N N 271 LEU CG CD2 sing N N 272 LEU CG HG sing N N 273 LEU CD1 HD11 sing N N 274 LEU CD1 HD12 sing N N 275 LEU CD1 HD13 sing N N 276 LEU CD2 HD21 sing N N 277 LEU CD2 HD22 sing N N 278 LEU CD2 HD23 sing N N 279 LEU OXT HXT sing N N 280 LYS N CA sing N N 281 LYS N H sing N N 282 LYS N H2 sing N N 283 LYS CA C sing N N 284 LYS CA CB sing N N 285 LYS CA HA sing N N 286 LYS C O doub N N 287 LYS C OXT sing N N 288 LYS CB CG sing N N 289 LYS CB HB2 sing N N 290 LYS CB HB3 sing N N 291 LYS CG CD sing N N 292 LYS CG HG2 sing N N 293 LYS CG HG3 sing N N 294 LYS CD CE sing N N 295 LYS CD HD2 sing N N 296 LYS CD HD3 sing N N 297 LYS CE NZ sing N N 298 LYS CE HE2 sing N N 299 LYS CE HE3 sing N N 300 LYS NZ HZ1 sing N N 301 LYS NZ HZ2 sing N N 302 LYS NZ HZ3 sing N N 303 LYS OXT HXT sing N N 304 MET N CA sing N N 305 MET N H sing N N 306 MET N H2 sing N N 307 MET CA C sing N N 308 MET CA CB sing N N 309 MET CA HA sing N N 310 MET C O doub N N 311 MET C OXT sing N N 312 MET CB CG sing N N 313 MET CB HB2 sing N N 314 MET CB HB3 sing N N 315 MET CG SD sing N N 316 MET CG HG2 sing N N 317 MET CG HG3 sing N N 318 MET SD CE sing N N 319 MET CE HE1 sing N N 320 MET CE HE2 sing N N 321 MET CE HE3 sing N N 322 MET OXT HXT sing N N 323 PHE N CA sing N N 324 PHE N H sing N N 325 PHE N H2 sing N N 326 PHE CA C sing N N 327 PHE CA CB sing N N 328 PHE CA HA sing N N 329 PHE C O doub N N 330 PHE C OXT sing N N 331 PHE CB CG sing N N 332 PHE CB HB2 sing N N 333 PHE CB HB3 sing N N 334 PHE CG CD1 doub Y N 335 PHE CG CD2 sing Y N 336 PHE CD1 CE1 sing Y N 337 PHE CD1 HD1 sing N N 338 PHE CD2 CE2 doub Y N 339 PHE CD2 HD2 sing N N 340 PHE CE1 CZ doub Y N 341 PHE CE1 HE1 sing N N 342 PHE CE2 CZ sing Y N 343 PHE CE2 HE2 sing N N 344 PHE CZ HZ sing N N 345 PHE OXT HXT sing N N 346 PRO N CA sing N N 347 PRO N CD sing N N 348 PRO N H sing N N 349 PRO CA C sing N N 350 PRO CA CB sing N N 351 PRO CA HA sing N N 352 PRO C O doub N N 353 PRO C OXT sing N N 354 PRO CB CG sing N N 355 PRO CB HB2 sing N N 356 PRO CB HB3 sing N N 357 PRO CG CD sing N N 358 PRO CG HG2 sing N N 359 PRO CG HG3 sing N N 360 PRO CD HD2 sing N N 361 PRO CD HD3 sing N N 362 PRO OXT HXT sing N N 363 SER N CA sing N N 364 SER N H sing N N 365 SER N H2 sing N N 366 SER CA C sing N N 367 SER CA CB sing N N 368 SER CA HA sing N N 369 SER C O doub N N 370 SER C OXT sing N N 371 SER CB OG sing N N 372 SER CB HB2 sing N N 373 SER CB HB3 sing N N 374 SER OG HG sing N N 375 SER OXT HXT sing N N 376 THR N CA sing N N 377 THR N H sing N N 378 THR N H2 sing N N 379 THR CA C sing N N 380 THR CA CB sing N N 381 THR CA HA sing N N 382 THR C O doub N N 383 THR C OXT sing N N 384 THR CB OG1 sing N N 385 THR CB CG2 sing N N 386 THR CB HB sing N N 387 THR OG1 HG1 sing N N 388 THR CG2 HG21 sing N N 389 THR CG2 HG22 sing N N 390 THR CG2 HG23 sing N N 391 THR OXT HXT sing N N 392 TYR N CA sing N N 393 TYR N H sing N N 394 TYR N H2 sing N N 395 TYR CA C sing N N 396 TYR CA CB sing N N 397 TYR CA HA sing N N 398 TYR C O doub N N 399 TYR C OXT sing N N 400 TYR CB CG sing N N 401 TYR CB HB2 sing N N 402 TYR CB HB3 sing N N 403 TYR CG CD1 doub Y N 404 TYR CG CD2 sing Y N 405 TYR CD1 CE1 sing Y N 406 TYR CD1 HD1 sing N N 407 TYR CD2 CE2 doub Y N 408 TYR CD2 HD2 sing N N 409 TYR CE1 CZ doub Y N 410 TYR CE1 HE1 sing N N 411 TYR CE2 CZ sing Y N 412 TYR CE2 HE2 sing N N 413 TYR CZ OH sing N N 414 TYR OH HH sing N N 415 TYR OXT HXT sing N N 416 VAL N CA sing N N 417 VAL N H sing N N 418 VAL N H2 sing N N 419 VAL CA C sing N N 420 VAL CA CB sing N N 421 VAL CA HA sing N N 422 VAL C O doub N N 423 VAL C OXT sing N N 424 VAL CB CG1 sing N N 425 VAL CB CG2 sing N N 426 VAL CB HB sing N N 427 VAL CG1 HG11 sing N N 428 VAL CG1 HG12 sing N N 429 VAL CG1 HG13 sing N N 430 VAL CG2 HG21 sing N N 431 VAL CG2 HG22 sing N N 432 VAL CG2 HG23 sing N N 433 VAL OXT HXT sing N N 434 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRATE ANION' FLC 3 'CYANIDE ION' CYN 4 'PROTOPORPHYRIN IX CONTAINING FE' HEM 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DLY _pdbx_initial_refinement_model.details 'PDB entry 1dly' #