HEADER HYDROLASE 28-JAN-04 1S6Y TITLE 2.3A CRYSTAL STRUCTURE OF PHOSPHO-BETA-GLUCOSIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-PHOSPHO-BETA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.86; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 GENE: LICH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS HYDROLASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG EXPDTA X-RAY DIFFRACTION AUTHOR V.TERESHKO,I.DEMENTIEVA,Y.KIM,F.COLLAT,A.JOACHIMIAK,A.KOSSIAKOFF, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 6 30-OCT-24 1S6Y 1 LINK REVDAT 5 13-JUL-11 1S6Y 1 VERSN REVDAT 4 23-JUN-09 1S6Y 1 REMARK REVDAT 3 24-FEB-09 1S6Y 1 VERSN REVDAT 2 18-JAN-05 1S6Y 1 AUTHOR KEYWDS REMARK REVDAT 1 25-MAY-04 1S6Y 0 JRNL AUTH V.TERESHKO,I.DEMENTIEVA,Y.KIM,F.COLLAT,A.JOACHIMIAK, JRNL AUTH 2 A.KOSSIAKOFF JRNL TITL 2.3A CRYSTAL STRUCTURE OF PHOSPHO-BETA-GLUCOSIDASE, LICH JRNL TITL 2 GENE PRODUCT FROM BACILLUS STEAROTHERMOPHILUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 17294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 905 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1188 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3223 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.61000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : 1.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.437 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.265 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.174 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.961 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3293 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3118 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4460 ; 1.361 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7246 ; 1.012 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 413 ; 7.945 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;36.686 ;24.113 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 583 ;18.118 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;17.986 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 512 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3626 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 630 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 742 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3098 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1871 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 139 ; 0.169 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.179 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 68 ; 0.196 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2600 ; 1.666 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 847 ; 0.335 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3331 ; 1.939 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1376 ; 3.229 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1129 ; 4.656 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 445 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3202 22.7124 22.1852 REMARK 3 T TENSOR REMARK 3 T11: -0.0135 T22: -0.0575 REMARK 3 T33: -0.0163 T12: -0.0265 REMARK 3 T13: -0.0078 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 0.5646 L22: 0.6957 REMARK 3 L33: 0.9289 L12: -0.2037 REMARK 3 L13: 0.3297 L23: -0.3824 REMARK 3 S TENSOR REMARK 3 S11: 0.0618 S12: 0.0834 S13: -0.1466 REMARK 3 S21: -0.0368 S22: 0.0128 S23: 0.1224 REMARK 3 S31: 0.2251 S32: -0.0902 S33: -0.0746 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1S6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-FEB-04. REMARK 100 THE DEPOSITION ID IS D_1000021444. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98080 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18209 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.34300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). THE BIOLOGICAL UNIT IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASP A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASP A 2 REMARK 465 LYS A 3 REMARK 465 ASP A 228 REMARK 465 ARG A 229 REMARK 465 SER A 230 REMARK 465 GLY A 231 REMARK 465 VAL A 232 REMARK 465 THR A 233 REMARK 465 MSE A 234 REMARK 465 LYS A 235 REMARK 465 ASN A 236 REMARK 465 ILE A 237 REMARK 465 VAL A 238 REMARK 465 ASP A 239 REMARK 465 ASN A 303 REMARK 465 LEU A 304 REMARK 465 ALA A 305 REMARK 465 ILE A 306 REMARK 465 LYS A 307 REMARK 465 PRO A 308 REMARK 465 PRO A 309 REMARK 465 GLN A 310 REMARK 465 LEU A 311 REMARK 465 GLU A 312 REMARK 465 LYS A 313 REMARK 465 ALA A 446 REMARK 465 THR A 447 REMARK 465 ALA A 448 REMARK 465 GLY A 449 REMARK 465 ASN A 450 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 445 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 73 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A 402 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 65 47.84 -86.89 REMARK 500 ASP A 79 109.21 -52.25 REMARK 500 GLN A 87 49.47 -143.50 REMARK 500 GLU A 137 34.14 -76.59 REMARK 500 GLU A 138 -65.87 -166.82 REMARK 500 CYS A 140 71.93 -164.93 REMARK 500 PRO A 151 90.20 -16.20 REMARK 500 MSE A 203 43.07 -156.66 REMARK 500 HIS A 226 -7.25 153.72 REMARK 500 THR A 277 -92.35 -129.40 REMARK 500 LEU A 292 -39.06 -165.00 REMARK 500 ALA A 317 133.15 -176.55 REMARK 500 TYR A 318 41.19 -103.63 REMARK 500 ALA A 444 85.50 14.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 150 PRO A 151 -77.82 REMARK 500 ASP A 298 PRO A 299 -142.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC36201 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THE PROTEIN HAS NOT YET BEEN DEPOSITED REMARK 999 IN ANY REFERENCE SEQUENCE DATABASE. RESIDUES -2 TO 0 REMARK 999 ARE CLONING ARTIFACTS. DBREF 1S6Y A -2 450 UNP P84135 P84135_BACST 1 450 SEQRES 1 A 450 SER ASP ALA MSE ASP LYS ARG LEU LYS ILE ALA THR ILE SEQRES 2 A 450 GLY GLY GLY SER SER TYR THR PRO GLU LEU VAL GLU GLY SEQRES 3 A 450 LEU ILE LYS ARG TYR HIS GLU LEU PRO VAL GLY GLU LEU SEQRES 4 A 450 TRP LEU VAL ASP ILE PRO GLU GLY LYS GLU LYS LEU GLU SEQRES 5 A 450 ILE VAL GLY ALA LEU ALA LYS ARG MSE VAL GLU LYS ALA SEQRES 6 A 450 GLY VAL PRO ILE GLU ILE HIS LEU THR LEU ASP ARG ARG SEQRES 7 A 450 ARG ALA LEU ASP GLY ALA ASP PHE VAL THR THR GLN PHE SEQRES 8 A 450 ARG VAL GLY GLY LEU GLU ALA ARG ALA LYS ASP GLU ARG SEQRES 9 A 450 ILE PRO LEU LYS TYR GLY VAL ILE GLY GLN GLU THR ASN SEQRES 10 A 450 GLY PRO GLY GLY LEU PHE LYS GLY LEU ARG THR ILE PRO SEQRES 11 A 450 VAL ILE LEU ASP ILE ILE ARG ASP MSE GLU GLU LEU CYS SEQRES 12 A 450 PRO ASP ALA TRP LEU ILE ASN PHE THR ASN PRO ALA GLY SEQRES 13 A 450 MSE VAL THR GLU ALA VAL LEU ARG TYR THR LYS GLN GLU SEQRES 14 A 450 LYS VAL VAL GLY LEU CYS ASN VAL PRO ILE GLY MSE ARG SEQRES 15 A 450 MSE GLY VAL ALA LYS LEU LEU GLY VAL ASP ALA ASP ARG SEQRES 16 A 450 VAL HIS ILE ASP PHE ALA GLY LEU ASN HIS MSE VAL PHE SEQRES 17 A 450 GLY LEU HIS VAL TYR LEU ASP GLY VAL GLU VAL THR GLU SEQRES 18 A 450 LYS VAL ILE ASP LEU VAL ALA HIS PRO ASP ARG SER GLY SEQRES 19 A 450 VAL THR MSE LYS ASN ILE VAL ASP LEU GLY TRP GLU PRO SEQRES 20 A 450 ASP PHE LEU LYS GLY LEU LYS VAL LEU PRO CYS PRO TYR SEQRES 21 A 450 HIS ARG TYR TYR PHE GLN THR ASP LYS MSE LEU ALA GLU SEQRES 22 A 450 GLU LEU GLU ALA ALA LYS THR LYS GLY THR ARG ALA GLU SEQRES 23 A 450 VAL VAL GLN GLN LEU GLU LYS GLU LEU PHE GLU LEU TYR SEQRES 24 A 450 LYS ASP PRO ASN LEU ALA ILE LYS PRO PRO GLN LEU GLU SEQRES 25 A 450 LYS ARG GLY GLY ALA TYR TYR SER ASP ALA ALA CYS SER SEQRES 26 A 450 LEU ILE SER SER ILE TYR ASN ASP LYS ARG ASP ILE GLN SEQRES 27 A 450 PRO VAL ASN THR ARG ASN ASN GLY ALA ILE ALA SER ILE SEQRES 28 A 450 SER ALA GLU SER ALA VAL GLU VAL ASN CYS VAL ILE THR SEQRES 29 A 450 LYS ASP GLY PRO LYS PRO ILE ALA VAL GLY ASP LEU PRO SEQRES 30 A 450 VAL ALA VAL ARG GLY LEU VAL GLN GLN ILE LYS SER PHE SEQRES 31 A 450 GLU ARG VAL ALA ALA GLU ALA ALA VAL THR GLY ASP TYR SEQRES 32 A 450 GLN THR ALA LEU VAL ALA MSE THR ILE ASN PRO LEU VAL SEQRES 33 A 450 PRO SER ASP THR ILE ALA LYS GLN ILE LEU ASP GLU MSE SEQRES 34 A 450 LEU GLU ALA HIS LYS GLU TYR LEU PRO GLN PHE PHE LYS SEQRES 35 A 450 GLN ALA LYS ALA THR ALA GLY ASN MODRES 1S6Y MSE A 58 MET SELENOMETHIONINE MODRES 1S6Y MSE A 136 MET SELENOMETHIONINE MODRES 1S6Y MSE A 154 MET SELENOMETHIONINE MODRES 1S6Y MSE A 178 MET SELENOMETHIONINE MODRES 1S6Y MSE A 180 MET SELENOMETHIONINE MODRES 1S6Y MSE A 203 MET SELENOMETHIONINE MODRES 1S6Y MSE A 267 MET SELENOMETHIONINE MODRES 1S6Y MSE A 410 MET SELENOMETHIONINE MODRES 1S6Y MSE A 429 MET SELENOMETHIONINE HET MSE A 58 8 HET MSE A 136 8 HET MSE A 154 8 HET MSE A 178 8 HET MSE A 180 8 HET MSE A 203 8 HET MSE A 267 8 HET MSE A 410 8 HET MSE A 429 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 HOH *140(H2 O) HELIX 1 1 TYR A 16 ARG A 27 1 12 HELIX 2 2 ILE A 41 GLU A 43 5 3 HELIX 3 3 GLY A 44 ALA A 62 1 19 HELIX 4 4 ASP A 73 ASP A 79 1 7 HELIX 5 5 GLY A 91 ILE A 102 1 12 HELIX 6 6 PRO A 103 GLY A 107 5 5 HELIX 7 7 GLY A 115 CYS A 140 1 26 HELIX 8 8 PRO A 151 THR A 163 1 13 HELIX 9 9 ASN A 173 GLY A 187 1 15 HELIX 10 10 ASP A 189 ASP A 191 5 3 HELIX 11 11 VAL A 216 ALA A 225 1 10 HELIX 12 12 GLU A 243 LYS A 251 1 9 HELIX 13 13 CYS A 255 TYR A 257 5 3 HELIX 14 14 HIS A 258 GLN A 263 1 6 HELIX 15 15 GLN A 263 THR A 277 1 15 HELIX 16 16 THR A 280 GLU A 294 1 15 HELIX 17 17 TYR A 318 ASP A 333 1 16 HELIX 18 18 PRO A 377 GLY A 401 1 25 HELIX 19 19 ASP A 402 ASN A 413 1 12 HELIX 20 20 SER A 418 HIS A 433 1 16 HELIX 21 21 LYS A 434 LEU A 437 5 4 SHEET 1 A 6 GLU A 67 THR A 71 0 SHEET 2 A 6 VAL A 33 VAL A 39 1 N LEU A 38 O HIS A 69 SHEET 3 A 6 LEU A 5 ILE A 10 1 N THR A 9 O TRP A 37 SHEET 4 A 6 PHE A 83 THR A 86 1 O THR A 85 N ALA A 8 SHEET 5 A 6 TRP A 144 ASN A 147 1 O ILE A 146 N VAL A 84 SHEET 6 A 6 VAL A 168 GLY A 170 1 O VAL A 169 N ASN A 147 SHEET 1 B 5 VAL A 214 GLU A 215 0 SHEET 2 B 5 MSE A 203 LEU A 211 -1 N LEU A 211 O VAL A 214 SHEET 3 B 5 VAL A 193 LEU A 200 -1 N ALA A 198 O PHE A 205 SHEET 4 B 5 ALA A 356 THR A 364 -1 O GLU A 358 N GLY A 199 SHEET 5 B 5 ILE A 337 ARG A 343 -1 N THR A 342 O VAL A 357 SHEET 1 C 5 VAL A 214 GLU A 215 0 SHEET 2 C 5 MSE A 203 LEU A 211 -1 N LEU A 211 O VAL A 214 SHEET 3 C 5 VAL A 193 LEU A 200 -1 N ALA A 198 O PHE A 205 SHEET 4 C 5 ALA A 356 THR A 364 -1 O GLU A 358 N GLY A 199 SHEET 5 C 5 GLY A 367 PRO A 370 -1 O LYS A 369 N VAL A 362 LINK C ARG A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N VAL A 59 1555 1555 1.33 LINK C ASP A 135 N MSE A 136 1555 1555 1.33 LINK C MSE A 136 N GLU A 137 1555 1555 1.33 LINK C GLY A 153 N MSE A 154 1555 1555 1.34 LINK C MSE A 154 N VAL A 155 1555 1555 1.32 LINK C GLY A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N ARG A 179 1555 1555 1.33 LINK C ARG A 179 N MSE A 180 1555 1555 1.33 LINK C MSE A 180 N GLY A 181 1555 1555 1.33 LINK C HIS A 202 N MSE A 203 1555 1555 1.33 LINK C MSE A 203 N VAL A 204 1555 1555 1.32 LINK C LYS A 266 N MSE A 267 1555 1555 1.33 LINK C MSE A 267 N LEU A 268 1555 1555 1.33 LINK C ALA A 409 N MSE A 410 1555 1555 1.33 LINK C MSE A 410 N THR A 411 1555 1555 1.33 LINK C GLU A 428 N MSE A 429 1555 1555 1.33 LINK C MSE A 429 N LEU A 430 1555 1555 1.33 CRYST1 61.314 82.504 83.504 90.00 90.00 90.00 P 2 2 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016309 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011975 0.00000