HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-JAN-04 1S7O TITLE CRYSTAL STRUCTURE OF PUTATIVE DNA BINDING PROTEIN SP_1288 FROM TITLE 2 STREPTOCOCCUS PYGENES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL UPF0122 PROTEIN COMPND 3 SPY1201/SPYM3_0842/SPS1042/SPYM18_1152; COMPND 4 CHAIN: A, B, C; COMPND 5 FRAGMENT: GI 15675166; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES SEROTYPE M3; SOURCE 3 ORGANISM_TAXID: 301448; SOURCE 4 STRAIN: SEROTYPE M3; SOURCE 5 GENE: SPY1201, SPYM3_0842, SPS1042, SPYM18_1152; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PB3.1325B KEYWDS PUTATIVE DNA BINDING PROTEIN; STRUCTURAL GENOMICS, SIGNAL RECOGNITION KEYWDS 2 PARTICLE, RNA POLYMERASE SIGMA FACTOR, X-RAT CRYSTALLOGRAPHY, KEYWDS 3 UPF0122, STRUCTURE FUNDED BY NIH, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 4 BERKELEY STRUCTURAL GENOMICS CENTER, BSGC, STRUCTURAL GENOMICS, KEYWDS 5 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR V.OGANESYAN,R.PUFAN,A.DEGIOVANNI,H.YOKOTA,R.KIM,S.-H.KIM,BERKELEY AUTHOR 2 STRUCTURAL GENOMICS CENTER (BSGC) REVDAT 8 14-FEB-24 1S7O 1 REMARK REVDAT 7 11-OCT-17 1S7O 1 REMARK REVDAT 6 13-JUL-11 1S7O 1 VERSN REVDAT 5 24-FEB-09 1S7O 1 VERSN REVDAT 4 24-OCT-06 1S7O 1 KEYWDS AUTHOR REMARK DBREF REVDAT 4 2 1 MASTER REVDAT 3 14-SEP-04 1S7O 1 SOURCE REVDAT 2 24-AUG-04 1S7O 1 KEYWDS REVDAT 1 29-JUN-04 1S7O 0 JRNL AUTH V.OGANESYAN,R.PUFAN,A.DEGIOVANNI,H.YOKOTA,R.KIM,S.H.KIM JRNL TITL STRUCTURE OF THE PUTATIVE DNA-BINDING PROTEIN SP_1288 FROM JRNL TITL 2 STREPTOCOCCUS PYOGENES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 1266 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 15213388 JRNL DOI 10.1107/S0907444904009394 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 19476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1053 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1321 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2691 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 39.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.85000 REMARK 3 B22 (A**2) : 2.20000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.40000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.281 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.301 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2731 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3688 ; 1.558 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 315 ; 3.628 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;15.007 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 399 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2082 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1237 ; 0.254 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.182 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 79 ; 0.313 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.335 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1587 ; 0.860 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2568 ; 1.743 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1144 ; 3.038 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1120 ; 5.005 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 57.8365 44.3608 42.2744 REMARK 3 T TENSOR REMARK 3 T11: 0.0392 T22: 0.0961 REMARK 3 T33: 0.0700 T12: -0.0124 REMARK 3 T13: 0.0272 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 4.8215 L22: 4.6559 REMARK 3 L33: 6.4562 L12: 2.2330 REMARK 3 L13: 2.8389 L23: 4.3926 REMARK 3 S TENSOR REMARK 3 S11: 0.1383 S12: -0.4668 S13: 0.0617 REMARK 3 S21: 0.2855 S22: -0.0817 S23: 0.2001 REMARK 3 S31: 0.1256 S32: -0.2581 S33: -0.0566 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 111 REMARK 3 ORIGIN FOR THE GROUP (A): 58.5790 16.5188 32.2443 REMARK 3 T TENSOR REMARK 3 T11: 0.0384 T22: 0.1452 REMARK 3 T33: 0.0765 T12: -0.0020 REMARK 3 T13: -0.0401 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 3.8237 L22: 6.7228 REMARK 3 L33: 0.6569 L12: -0.1634 REMARK 3 L13: -1.3421 L23: 1.0648 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: -0.3721 S13: -0.1769 REMARK 3 S21: 0.3477 S22: -0.1819 S23: 0.0312 REMARK 3 S31: -0.0309 S32: 0.2726 S33: 0.1251 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 74 REMARK 3 ORIGIN FOR THE GROUP (A): 85.8228 14.2167 49.8748 REMARK 3 T TENSOR REMARK 3 T11: 0.0868 T22: 0.0721 REMARK 3 T33: 0.0433 T12: 0.0366 REMARK 3 T13: -0.0026 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.8752 L22: 2.2133 REMARK 3 L33: 11.9206 L12: 1.0322 REMARK 3 L13: 1.6458 L23: 3.5949 REMARK 3 S TENSOR REMARK 3 S11: -0.0462 S12: -0.1914 S13: 0.0581 REMARK 3 S21: -0.0039 S22: -0.0748 S23: -0.0289 REMARK 3 S31: -0.2271 S32: -0.2198 S33: 0.1210 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 75 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 79.0676 23.9432 23.5662 REMARK 3 T TENSOR REMARK 3 T11: 0.0648 T22: 0.0583 REMARK 3 T33: 0.1022 T12: 0.0362 REMARK 3 T13: 0.0383 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 3.2152 L22: 1.8264 REMARK 3 L33: 2.8289 L12: 0.4358 REMARK 3 L13: 1.0723 L23: -1.6096 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: -0.1709 S13: 0.3061 REMARK 3 S21: 0.2409 S22: -0.0248 S23: 0.2716 REMARK 3 S31: -0.2017 S32: -0.0624 S33: 0.0329 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 5 C 74 REMARK 3 ORIGIN FOR THE GROUP (A): 78.8301 -9.7854 31.6162 REMARK 3 T TENSOR REMARK 3 T11: 0.0571 T22: 0.1042 REMARK 3 T33: 0.0550 T12: -0.0247 REMARK 3 T13: -0.0121 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.0745 L22: 5.9737 REMARK 3 L33: 2.2106 L12: -1.9137 REMARK 3 L13: -0.7875 L23: 0.3634 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: 0.0949 S13: -0.1245 REMARK 3 S21: -0.1908 S22: -0.0605 S23: 0.2492 REMARK 3 S31: 0.1557 S32: -0.3231 S33: 0.0405 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 75 C 111 REMARK 3 ORIGIN FOR THE GROUP (A): 76.8696 15.8731 16.7497 REMARK 3 T TENSOR REMARK 3 T11: 0.0596 T22: 0.0982 REMARK 3 T33: 0.0766 T12: -0.0078 REMARK 3 T13: -0.0094 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 2.9860 L22: 3.1696 REMARK 3 L33: 1.3892 L12: 0.8767 REMARK 3 L13: 0.1232 L23: -1.8394 REMARK 3 S TENSOR REMARK 3 S11: -0.1711 S12: 0.3443 S13: -0.3006 REMARK 3 S21: -0.1464 S22: 0.2868 S23: 0.2155 REMARK 3 S31: 0.0580 S32: -0.1017 S33: -0.1157 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-04. REMARK 100 THE DEPOSITION ID IS D_1000021470. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 3.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL, SI (111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DCS REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40607 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.33600 REMARK 200 R SYM FOR SHELL (I) : 0.33600 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CITRIC ACID, AMMONIUM NITRATE, PH 3.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.80400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.84250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.80400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.84250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS PROBABLY DIMER; MOLECULES WITH REMARK 300 CHAIN IDENTIFIERS B AND C REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 115.14255 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 53.82233 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ILE A 3 REMARK 465 MET A 4 REMARK 465 GLU A 5 REMARK 465 ILE A 6 REMARK 465 GLU A 113 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ILE B 3 REMARK 465 MET B 4 REMARK 465 GLU B 5 REMARK 465 ASN B 111 REMARK 465 ARG B 112 REMARK 465 GLU B 113 REMARK 465 MET C 1 REMARK 465 ASN C 2 REMARK 465 ILE C 3 REMARK 465 MET C 4 REMARK 465 GLU C 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE MET C 28 O HOH C 115 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 38 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 57 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG C 11 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG C 61 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 42.69 73.32 REMARK 500 TYR A 93 64.29 -117.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BSGCAIR30594 RELATED DB: TARGETDB DBREF 1S7O A 1 113 UNP P67253 Y1201_STRPY 1 113 DBREF 1S7O B 1 113 UNP P67253 Y1201_STRPY 1 113 DBREF 1S7O C 1 113 UNP P67253 Y1201_STRPY 1 113 SEQRES 1 A 113 MET ASN ILE MET GLU ILE GLU LYS THR ASN ARG MET ASN SEQRES 2 A 113 ALA LEU PHE GLU PHE TYR ALA ALA LEU LEU THR ASP LYS SEQRES 3 A 113 GLN MET ASN TYR ILE GLU LEU TYR TYR ALA ASP ASP TYR SEQRES 4 A 113 SER LEU ALA GLU ILE ALA ASP GLU PHE GLY VAL SER ARG SEQRES 5 A 113 GLN ALA VAL TYR ASP ASN ILE LYS ARG THR GLU LYS ILE SEQRES 6 A 113 LEU GLU THR TYR GLU MET LYS LEU HIS MET TYR SER ASP SEQRES 7 A 113 TYR VAL VAL ARG SER GLU ILE PHE ASP ASP MET ILE ALA SEQRES 8 A 113 HIS TYR PRO HIS ASP GLU TYR LEU GLN GLU LYS ILE SER SEQRES 9 A 113 ILE LEU THR SER ILE ASP ASN ARG GLU SEQRES 1 B 113 MET ASN ILE MET GLU ILE GLU LYS THR ASN ARG MET ASN SEQRES 2 B 113 ALA LEU PHE GLU PHE TYR ALA ALA LEU LEU THR ASP LYS SEQRES 3 B 113 GLN MET ASN TYR ILE GLU LEU TYR TYR ALA ASP ASP TYR SEQRES 4 B 113 SER LEU ALA GLU ILE ALA ASP GLU PHE GLY VAL SER ARG SEQRES 5 B 113 GLN ALA VAL TYR ASP ASN ILE LYS ARG THR GLU LYS ILE SEQRES 6 B 113 LEU GLU THR TYR GLU MET LYS LEU HIS MET TYR SER ASP SEQRES 7 B 113 TYR VAL VAL ARG SER GLU ILE PHE ASP ASP MET ILE ALA SEQRES 8 B 113 HIS TYR PRO HIS ASP GLU TYR LEU GLN GLU LYS ILE SER SEQRES 9 B 113 ILE LEU THR SER ILE ASP ASN ARG GLU SEQRES 1 C 113 MET ASN ILE MET GLU ILE GLU LYS THR ASN ARG MET ASN SEQRES 2 C 113 ALA LEU PHE GLU PHE TYR ALA ALA LEU LEU THR ASP LYS SEQRES 3 C 113 GLN MET ASN TYR ILE GLU LEU TYR TYR ALA ASP ASP TYR SEQRES 4 C 113 SER LEU ALA GLU ILE ALA ASP GLU PHE GLY VAL SER ARG SEQRES 5 C 113 GLN ALA VAL TYR ASP ASN ILE LYS ARG THR GLU LYS ILE SEQRES 6 C 113 LEU GLU THR TYR GLU MET LYS LEU HIS MET TYR SER ASP SEQRES 7 C 113 TYR VAL VAL ARG SER GLU ILE PHE ASP ASP MET ILE ALA SEQRES 8 C 113 HIS TYR PRO HIS ASP GLU TYR LEU GLN GLU LYS ILE SER SEQRES 9 C 113 ILE LEU THR SER ILE ASP ASN ARG GLU FORMUL 4 HOH *103(H2 O) HELIX 1 1 THR A 9 ALA A 20 1 12 HELIX 2 2 ALA A 21 LEU A 23 5 3 HELIX 3 3 THR A 24 ALA A 36 1 13 HELIX 4 4 SER A 40 GLY A 49 1 10 HELIX 5 5 SER A 51 HIS A 74 1 24 HELIX 6 6 HIS A 74 TYR A 93 1 20 HELIX 7 7 ASP A 96 ASN A 111 1 16 HELIX 8 8 THR B 9 ALA B 20 1 12 HELIX 9 9 ALA B 21 LEU B 23 5 3 HELIX 10 10 THR B 24 ALA B 36 1 13 HELIX 11 11 SER B 40 GLY B 49 1 10 HELIX 12 12 SER B 51 HIS B 74 1 24 HELIX 13 13 HIS B 74 TYR B 93 1 20 HELIX 14 14 ASP B 96 ASP B 110 1 15 HELIX 15 15 THR C 9 ALA C 20 1 12 HELIX 16 16 ALA C 21 LEU C 23 5 3 HELIX 17 17 THR C 24 ASP C 37 1 14 HELIX 18 18 SER C 40 GLY C 49 1 10 HELIX 19 19 SER C 51 HIS C 74 1 24 HELIX 20 20 HIS C 74 TYR C 93 1 20 HELIX 21 21 ASP C 96 ARG C 112 1 17 CRYST1 127.608 69.685 55.247 90.00 103.04 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007836 0.000000 0.001814 0.00000 SCALE2 0.000000 0.014350 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018579 0.00000