data_1S8G # _entry.id 1S8G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1S8G pdb_00001s8g 10.2210/pdb1s8g/pdb RCSB RCSB021498 ? ? WWPDB D_1000021498 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-02-10 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_site 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1S8G _pdbx_database_status.recvd_initial_deposition_date 2004-02-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1S8H . unspecified PDB 1S8I . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ambrosio, A.L.B.' 1 'de Souza, D.H.F.' 2 'Nonato, M.C.' 3 'Selistre de Araujo, H.S.' 4 'Ownby, C.L.' 5 'Garratt, R.C.' 6 # _citation.id primary _citation.title 'A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 280 _citation.page_first 7326 _citation.page_last 7335 _citation.year 2005 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15596433 _citation.pdbx_database_id_DOI 10.1074/jbc.M410588200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ambrosio, A.L.B.' 1 ? primary 'Nonato, M.C.' 2 ? primary 'Selistre de Araujo, H.S.' 3 ? primary 'Arni, R.' 4 ? primary 'Ward, R.J.' 5 ? primary 'Ownby, C.L.' 6 ? primary 'de Souza, D.H.F.' 7 ? primary 'Garratt, R.C.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Phospholipase A2 homolog' 14049.392 1 3.1.1.4 ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'LAURIC ACID' 200.318 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 78 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Myotoxin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLLELGKMILQETGKNAITSYGSYGCNCGWGHRGQPKDATDRCCFVHKCCYKKLTDCNHKTDRYSYSWKNKAIICEEKNP CLKEMCECDKAVAICLRENLDTYNKKYKAYFKFKCKKPETC ; _entity_poly.pdbx_seq_one_letter_code_can ;SLLELGKMILQETGKNAITSYGSYGCNCGWGHRGQPKDATDRCCFVHKCCYKKLTDCNHKTDRYSYSWKNKAIICEEKNP CLKEMCECDKAVAICLRENLDTYNKKYKAYFKFKCKKPETC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'LAURIC ACID' DAO 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 LEU n 1 4 GLU n 1 5 LEU n 1 6 GLY n 1 7 LYS n 1 8 MET n 1 9 ILE n 1 10 LEU n 1 11 GLN n 1 12 GLU n 1 13 THR n 1 14 GLY n 1 15 LYS n 1 16 ASN n 1 17 ALA n 1 18 ILE n 1 19 THR n 1 20 SER n 1 21 TYR n 1 22 GLY n 1 23 SER n 1 24 TYR n 1 25 GLY n 1 26 CYS n 1 27 ASN n 1 28 CYS n 1 29 GLY n 1 30 TRP n 1 31 GLY n 1 32 HIS n 1 33 ARG n 1 34 GLY n 1 35 GLN n 1 36 PRO n 1 37 LYS n 1 38 ASP n 1 39 ALA n 1 40 THR n 1 41 ASP n 1 42 ARG n 1 43 CYS n 1 44 CYS n 1 45 PHE n 1 46 VAL n 1 47 HIS n 1 48 LYS n 1 49 CYS n 1 50 CYS n 1 51 TYR n 1 52 LYS n 1 53 LYS n 1 54 LEU n 1 55 THR n 1 56 ASP n 1 57 CYS n 1 58 ASN n 1 59 HIS n 1 60 LYS n 1 61 THR n 1 62 ASP n 1 63 ARG n 1 64 TYR n 1 65 SER n 1 66 TYR n 1 67 SER n 1 68 TRP n 1 69 LYS n 1 70 ASN n 1 71 LYS n 1 72 ALA n 1 73 ILE n 1 74 ILE n 1 75 CYS n 1 76 GLU n 1 77 GLU n 1 78 LYS n 1 79 ASN n 1 80 PRO n 1 81 CYS n 1 82 LEU n 1 83 LYS n 1 84 GLU n 1 85 MET n 1 86 CYS n 1 87 GLU n 1 88 CYS n 1 89 ASP n 1 90 LYS n 1 91 ALA n 1 92 VAL n 1 93 ALA n 1 94 ILE n 1 95 CYS n 1 96 LEU n 1 97 ARG n 1 98 GLU n 1 99 ASN n 1 100 LEU n 1 101 ASP n 1 102 THR n 1 103 TYR n 1 104 ASN n 1 105 LYS n 1 106 LYS n 1 107 TYR n 1 108 LYS n 1 109 ALA n 1 110 TYR n 1 111 PHE n 1 112 LYS n 1 113 PHE n 1 114 LYS n 1 115 CYS n 1 116 LYS n 1 117 LYS n 1 118 PRO n 1 119 GLU n 1 120 THR n 1 121 CYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'broad-banded copperhead' _entity_src_nat.pdbx_organism_scientific 'Agkistrodon contortrix laticinctus' _entity_src_nat.pdbx_ncbi_taxonomy_id 37195 _entity_src_nat.genus Agkistrodon _entity_src_nat.species 'Agkistrodon contortrix' _entity_src_nat.strain laticinctus _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'Snake venom protein' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAO non-polymer . 'LAURIC ACID' ? 'C12 H24 O2' 200.318 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 16 16 LYS LYS A . n A 1 16 ASN 16 17 17 ASN ASN A . n A 1 17 ALA 17 18 18 ALA ALA A . n A 1 18 ILE 18 19 19 ILE ILE A . n A 1 19 THR 19 20 20 THR THR A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 TYR 21 22 22 TYR TYR A . n A 1 22 GLY 22 23 23 GLY GLY A . n A 1 23 SER 23 24 24 SER SER A . n A 1 24 TYR 24 25 25 TYR TYR A . n A 1 25 GLY 25 26 26 GLY GLY A . n A 1 26 CYS 26 27 27 CYS CYS A . n A 1 27 ASN 27 28 28 ASN ASN A . n A 1 28 CYS 28 29 29 CYS CYS A . n A 1 29 GLY 29 30 30 GLY GLY A . n A 1 30 TRP 30 31 31 TRP TRP A . n A 1 31 GLY 31 32 32 GLY GLY A . n A 1 32 HIS 32 33 33 HIS HIS A . n A 1 33 ARG 33 34 34 ARG ARG A . n A 1 34 GLY 34 35 35 GLY GLY A . n A 1 35 GLN 35 36 36 GLN GLN A . n A 1 36 PRO 36 37 37 PRO PRO A . n A 1 37 LYS 37 38 38 LYS LYS A . n A 1 38 ASP 38 39 39 ASP ASP A . n A 1 39 ALA 39 40 40 ALA ALA A . n A 1 40 THR 40 41 41 THR THR A . n A 1 41 ASP 41 42 42 ASP ASP A . n A 1 42 ARG 42 43 43 ARG ARG A . n A 1 43 CYS 43 44 44 CYS CYS A . n A 1 44 CYS 44 45 45 CYS CYS A . n A 1 45 PHE 45 46 46 PHE PHE A . n A 1 46 VAL 46 47 47 VAL VAL A . n A 1 47 HIS 47 48 48 HIS HIS A . n A 1 48 LYS 48 49 49 LYS LYS A . n A 1 49 CYS 49 50 50 CYS CYS A . n A 1 50 CYS 50 51 51 CYS CYS A . n A 1 51 TYR 51 52 52 TYR TYR A . n A 1 52 LYS 52 53 53 LYS LYS A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 LEU 54 55 55 LEU LEU A . n A 1 55 THR 55 56 56 THR THR A . n A 1 56 ASP 56 59 59 ASP ASP A . n A 1 57 CYS 57 61 61 CYS CYS A . n A 1 58 ASN 58 67 67 ASN ASN A . n A 1 59 HIS 59 68 68 HIS HIS A . n A 1 60 LYS 60 69 69 LYS LYS A . n A 1 61 THR 61 70 70 THR THR A . n A 1 62 ASP 62 71 71 ASP ASP A . n A 1 63 ARG 63 72 72 ARG ARG A . n A 1 64 TYR 64 73 73 TYR TYR A . n A 1 65 SER 65 74 74 SER SER A . n A 1 66 TYR 66 75 75 TYR TYR A . n A 1 67 SER 67 76 76 SER SER A . n A 1 68 TRP 68 77 77 TRP TRP A . n A 1 69 LYS 69 78 78 LYS LYS A . n A 1 70 ASN 70 79 79 ASN ASN A . n A 1 71 LYS 71 80 80 LYS LYS A . n A 1 72 ALA 72 81 81 ALA ALA A . n A 1 73 ILE 73 82 82 ILE ILE A . n A 1 74 ILE 74 83 83 ILE ILE A . n A 1 75 CYS 75 84 84 CYS CYS A . n A 1 76 GLU 76 86 86 GLU GLU A . n A 1 77 GLU 77 87 87 GLU GLU A . n A 1 78 LYS 78 88 88 LYS LYS A . n A 1 79 ASN 79 89 89 ASN ASN A . n A 1 80 PRO 80 90 90 PRO PRO A . n A 1 81 CYS 81 91 91 CYS CYS A . n A 1 82 LEU 82 92 92 LEU LEU A . n A 1 83 LYS 83 93 93 LYS LYS A . n A 1 84 GLU 84 94 94 GLU GLU A . n A 1 85 MET 85 95 95 MET MET A . n A 1 86 CYS 86 96 96 CYS CYS A . n A 1 87 GLU 87 97 97 GLU GLU A . n A 1 88 CYS 88 98 98 CYS CYS A . n A 1 89 ASP 89 99 99 ASP ASP A . n A 1 90 LYS 90 100 100 LYS LYS A . n A 1 91 ALA 91 101 101 ALA ALA A . n A 1 92 VAL 92 102 102 VAL VAL A . n A 1 93 ALA 93 103 103 ALA ALA A . n A 1 94 ILE 94 104 104 ILE ILE A . n A 1 95 CYS 95 105 105 CYS CYS A . n A 1 96 LEU 96 106 106 LEU LEU A . n A 1 97 ARG 97 107 107 ARG ARG A . n A 1 98 GLU 98 108 108 GLU GLU A . n A 1 99 ASN 99 109 109 ASN ASN A . n A 1 100 LEU 100 110 110 LEU LEU A . n A 1 101 ASP 101 111 111 ASP ASP A . n A 1 102 THR 102 112 112 THR THR A . n A 1 103 TYR 103 113 113 TYR TYR A . n A 1 104 ASN 104 114 114 ASN ASN A . n A 1 105 LYS 105 115 115 LYS LYS A . n A 1 106 LYS 106 116 116 LYS LYS A . n A 1 107 TYR 107 117 117 TYR TYR A . n A 1 108 LYS 108 118 118 LYS LYS A . n A 1 109 ALA 109 119 119 ALA ALA A . n A 1 110 TYR 110 120 120 TYR TYR A . n A 1 111 PHE 111 121 121 PHE PHE A . n A 1 112 LYS 112 122 122 LYS LYS A . n A 1 113 PHE 113 124 124 PHE PHE A . n A 1 114 LYS 114 125 125 LYS LYS A . n A 1 115 CYS 115 126 126 CYS CYS A . n A 1 116 LYS 116 128 128 LYS LYS A . n A 1 117 LYS 117 129 129 LYS LYS A . n A 1 118 PRO 118 130 130 PRO PRO A . n A 1 119 GLU 119 131 131 GLU GLU A . n A 1 120 THR 120 132 132 THR THR A . n A 1 121 CYS 121 133 133 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 134 134 SO4 SO4 A . C 3 DAO 1 135 135 DAO LAU A . D 4 GOL 1 136 136 GOL GOL A . E 5 HOH 1 201 1 HOH HOH A . E 5 HOH 2 202 2 HOH HOH A . E 5 HOH 3 203 3 HOH HOH A . E 5 HOH 4 204 4 HOH HOH A . E 5 HOH 5 205 5 HOH HOH A . E 5 HOH 6 206 6 HOH HOH A . E 5 HOH 7 207 7 HOH HOH A . E 5 HOH 8 208 8 HOH HOH A . E 5 HOH 9 209 9 HOH HOH A . E 5 HOH 10 210 10 HOH HOH A . E 5 HOH 11 211 11 HOH HOH A . E 5 HOH 12 212 12 HOH HOH A . E 5 HOH 13 213 13 HOH HOH A . E 5 HOH 14 214 14 HOH HOH A . E 5 HOH 15 215 15 HOH HOH A . E 5 HOH 16 216 16 HOH HOH A . E 5 HOH 17 217 17 HOH HOH A . E 5 HOH 18 218 18 HOH HOH A . E 5 HOH 19 219 19 HOH HOH A . E 5 HOH 20 220 20 HOH HOH A . E 5 HOH 21 221 21 HOH HOH A . E 5 HOH 22 222 22 HOH HOH A . E 5 HOH 23 223 23 HOH HOH A . E 5 HOH 24 224 24 HOH HOH A . E 5 HOH 25 225 25 HOH HOH A . E 5 HOH 26 226 26 HOH HOH A . E 5 HOH 27 227 27 HOH HOH A . E 5 HOH 28 228 28 HOH HOH A . E 5 HOH 29 229 29 HOH HOH A . E 5 HOH 30 230 30 HOH HOH A . E 5 HOH 31 231 31 HOH HOH A . E 5 HOH 32 232 32 HOH HOH A . E 5 HOH 33 233 33 HOH HOH A . E 5 HOH 34 234 34 HOH HOH A . E 5 HOH 35 235 35 HOH HOH A . E 5 HOH 36 236 36 HOH HOH A . E 5 HOH 37 237 37 HOH HOH A . E 5 HOH 38 238 38 HOH HOH A . E 5 HOH 39 239 39 HOH HOH A . E 5 HOH 40 240 40 HOH HOH A . E 5 HOH 41 241 41 HOH HOH A . E 5 HOH 42 242 42 HOH HOH A . E 5 HOH 43 243 43 HOH HOH A . E 5 HOH 44 244 44 HOH HOH A . E 5 HOH 45 245 45 HOH HOH A . E 5 HOH 46 246 46 HOH HOH A . E 5 HOH 47 247 47 HOH HOH A . E 5 HOH 48 248 48 HOH HOH A . E 5 HOH 49 249 49 HOH HOH A . E 5 HOH 50 250 50 HOH HOH A . E 5 HOH 51 251 51 HOH HOH A . E 5 HOH 52 252 52 HOH HOH A . E 5 HOH 53 253 53 HOH HOH A . E 5 HOH 54 254 54 HOH HOH A . E 5 HOH 55 255 55 HOH HOH A . E 5 HOH 56 256 56 HOH HOH A . E 5 HOH 57 257 57 HOH HOH A . E 5 HOH 58 258 58 HOH HOH A . E 5 HOH 59 259 59 HOH HOH A . E 5 HOH 60 260 60 HOH HOH A . E 5 HOH 61 261 61 HOH HOH A . E 5 HOH 62 262 62 HOH HOH A . E 5 HOH 63 263 63 HOH HOH A . E 5 HOH 64 264 64 HOH HOH A . E 5 HOH 65 265 65 HOH HOH A . E 5 HOH 66 266 66 HOH HOH A . E 5 HOH 67 267 67 HOH HOH A . E 5 HOH 68 268 68 HOH HOH A . E 5 HOH 69 269 69 HOH HOH A . E 5 HOH 70 270 70 HOH HOH A . E 5 HOH 71 271 71 HOH HOH A . E 5 HOH 72 272 72 HOH HOH A . E 5 HOH 73 273 73 HOH HOH A . E 5 HOH 74 274 74 HOH HOH A . E 5 HOH 75 275 75 HOH HOH A . E 5 HOH 76 276 76 HOH HOH A . E 5 HOH 77 277 77 HOH HOH A . E 5 HOH 78 278 78 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 7 ? CD ? A LYS 7 CD 2 1 Y 0 A LYS 7 ? CE ? A LYS 7 CE 3 1 Y 0 A LYS 7 ? NZ ? A LYS 7 NZ 4 1 Y 0 A LYS 38 ? NZ ? A LYS 37 NZ 5 1 Y 0 A LYS 54 ? CD ? A LYS 53 CD 6 1 Y 0 A LYS 54 ? CE ? A LYS 53 CE 7 1 Y 0 A LYS 54 ? NZ ? A LYS 53 NZ 8 1 Y 0 A LYS 78 ? CD ? A LYS 69 CD 9 1 Y 0 A LYS 78 ? CE ? A LYS 69 CE 10 1 Y 0 A LYS 78 ? NZ ? A LYS 69 NZ 11 1 Y 0 A LYS 80 ? CD ? A LYS 71 CD 12 1 Y 0 A LYS 80 ? CE ? A LYS 71 CE 13 1 Y 0 A LYS 80 ? NZ ? A LYS 71 NZ 14 1 Y 0 A LYS 88 ? CD ? A LYS 78 CD 15 1 Y 0 A LYS 88 ? CE ? A LYS 78 CE 16 1 Y 0 A LYS 88 ? NZ ? A LYS 78 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MOSFLM 'data reduction' . ? 2 CCP4 'data scaling' '(SCALA)' ? 3 MOLREP phasing . ? 4 # _cell.entry_id 1S8G _cell.length_a 81.897 _cell.length_b 81.897 _cell.length_c 49.902 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S8G _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1S8G _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.64 _exptl_crystal.description ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'cacodylate, ammonium sulfate, PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2001-10-11 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.544 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'LNLS BEAMLINE D03B-MX1' _diffrn_source.pdbx_synchrotron_site LNLS _diffrn_source.pdbx_synchrotron_beamline D03B-MX1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.544 # _reflns.entry_id 1S8G _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 1.7 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 57.3 _reflns.number_all 7960 _reflns.number_obs 7960 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.118 _reflns.pdbx_Rsym_value 0.118 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.41 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.118 _reflns_shell.pdbx_Rsym_value 0.118 _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1S8G _refine.ls_number_reflns_obs 7387 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 57.3 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 97.29 _refine.ls_R_factor_obs 0.20663 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20457 _refine.ls_R_factor_R_free 0.24721 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 356 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.920 _refine.B_iso_mean 41.135 _refine.aniso_B[1][1] -1.72 _refine.aniso_B[2][2] -1.72 _refine.aniso_B[3][3] 3.45 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1PPA _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.282 _refine.pdbx_overall_ESU_R_Free 0.222 _refine.overall_SU_ML 0.157 _refine.overall_SU_B 6.687 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 972 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 1075 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 57.3 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.021 ? 1005 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 859 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.929 1.977 ? 1348 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.726 3.000 ? 2026 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.673 5.000 ? 120 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.051 0.200 ? 136 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1082 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 196 'X-RAY DIFFRACTION' ? r_nbd_refined 0.169 0.200 ? 215 'X-RAY DIFFRACTION' ? r_nbd_other 0.194 0.200 ? 1003 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.082 0.200 ? 556 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 67 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.146 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.225 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.131 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.247 1.500 ? 600 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.491 2.000 ? 961 'X-RAY DIFFRACTION' ? r_scbond_it 0.672 3.000 ? 405 'X-RAY DIFFRACTION' ? r_scangle_it 1.169 4.500 ? 387 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 549 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.407 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 19 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1S8G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1S8G _struct.title 'Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, fatty acid bound form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1S8G _struct_keywords.pdbx_keywords 'hydrolase, toxin' _struct_keywords.text 'Lys49-Phospholipase A2, snake venom, myotoxicity, fatty acid bound form, hydrolase, toxin' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PA2M_AGKCL _struct_ref.pdbx_db_accession P49121 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLLELGKMILQETGKNAITSYGSYGCNCGWGHRGQPKDATDRCCFVHKCCYKKLTDCNHKTDRYSYSWKNKAIICEEKNP CLKEMCECDKAVAICLRENLDTYNKKYKAYFKFKCKKPETC ; _struct_ref.pdbx_align_begin 17 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1S8G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 111 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P49121 _struct_ref_seq.db_align_beg 17 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 137 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 121 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? GLY A 14 ? SER A 1 GLY A 14 1 ? 14 HELX_P HELX_P2 2 ASN A 16 ? GLY A 22 ? ASN A 17 GLY A 23 1 ? 7 HELX_P HELX_P3 3 ASP A 38 ? LYS A 53 ? ASP A 39 LYS A 54 1 ? 16 HELX_P HELX_P4 4 ASN A 79 ? ASN A 99 ? ASN A 89 ASN A 109 1 ? 21 HELX_P HELX_P5 5 ASN A 104 ? LYS A 108 ? ASN A 114 LYS A 118 5 ? 5 HELX_P HELX_P6 6 PHE A 111 ? CYS A 115 ? PHE A 121 CYS A 126 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 27 A CYS 126 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 29 A CYS 45 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf3 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 44 A CYS 105 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf4 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 121 SG ? ? A CYS 50 A CYS 133 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 51 A CYS 98 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf6 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 61 A CYS 91 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf7 disulf ? ? A CYS 75 SG ? ? ? 1_555 A CYS 86 SG ? ? A CYS 84 A CYS 96 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 26 ? CYS A 115 ? CYS A 27 ? 1_555 CYS A 126 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 28 ? CYS A 44 ? CYS A 29 ? 1_555 CYS A 45 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 43 ? CYS A 95 ? CYS A 44 ? 1_555 CYS A 105 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 49 ? CYS A 121 ? CYS A 50 ? 1_555 CYS A 133 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 50 ? CYS A 88 ? CYS A 51 ? 1_555 CYS A 98 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 57 ? CYS A 81 ? CYS A 61 ? 1_555 CYS A 91 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 75 ? CYS A 86 ? CYS A 84 ? 1_555 CYS A 96 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 66 ? TRP A 68 ? TYR A 75 TRP A 77 A 2 ILE A 73 ? CYS A 75 ? ILE A 82 CYS A 84 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 67 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 76 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 74 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 83 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 134 ? 3 'BINDING SITE FOR RESIDUE SO4 A 134' AC2 Software A DAO 135 ? 11 'BINDING SITE FOR RESIDUE DAO A 135' AC3 Software A GOL 136 ? 6 'BINDING SITE FOR RESIDUE GOL A 136' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 32 ? HIS A 33 . ? 1_555 ? 2 AC1 3 ARG A 33 ? ARG A 34 . ? 1_555 ? 3 AC1 3 LYS A 52 ? LYS A 53 . ? 1_555 ? 4 AC2 11 LEU A 2 ? LEU A 2 . ? 1_555 ? 5 AC2 11 LEU A 3 ? LEU A 3 . ? 1_555 ? 6 AC2 11 GLY A 6 ? GLY A 6 . ? 1_555 ? 7 AC2 11 ILE A 9 ? ILE A 9 . ? 1_555 ? 8 AC2 11 ALA A 17 ? ALA A 18 . ? 1_555 ? 9 AC2 11 TYR A 21 ? TYR A 22 . ? 1_555 ? 10 AC2 11 GLY A 29 ? GLY A 30 . ? 1_555 ? 11 AC2 11 CYS A 44 ? CYS A 45 . ? 1_555 ? 12 AC2 11 VAL A 92 ? VAL A 102 . ? 1_555 ? 13 AC2 11 PHE A 113 ? PHE A 124 . ? 7_555 ? 14 AC2 11 GOL D . ? GOL A 136 . ? 1_555 ? 15 AC3 6 LEU A 5 ? LEU A 5 . ? 1_555 ? 16 AC3 6 GLY A 29 ? GLY A 30 . ? 1_555 ? 17 AC3 6 HIS A 47 ? HIS A 48 . ? 1_555 ? 18 AC3 6 TYR A 51 ? TYR A 52 . ? 1_555 ? 19 AC3 6 DAO C . ? DAO A 135 . ? 1_555 ? 20 AC3 6 HOH E . ? HOH A 266 . ? 1_555 ? # _pdbx_entry_details.entry_id 1S8G _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 24 ? ? -147.99 27.67 2 1 TRP A 77 ? ? -107.24 78.62 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 19.4229 36.2880 4.0570 0.0603 0.0659 0.0704 0.0332 0.0334 -0.0247 2.2578 1.3312 1.7000 -0.1258 0.2931 0.3957 0.0185 -0.1498 0.1209 -0.0415 0.1265 0.0019 0.0907 0.2051 -0.1450 'X-RAY DIFFRACTION' 2 ? refined 17.8181 24.8501 10.3195 0.1126 0.1314 0.1131 0.0316 -0.0046 -0.0161 62.2860 -89.4631 160.3429 -252.4038 114.3531 86.6442 -0.2172 2.4293 3.3603 -5.3871 1.8011 0.4523 -0.2113 -0.5836 -1.5840 'X-RAY DIFFRACTION' 3 ? refined 23.1617 35.0175 -1.8090 0.1311 0.1203 0.1228 0.0162 -0.0004 -0.0268 -10.8733 74.9259 52.4348 -28.0560 95.7581 -147.2043 -1.1637 2.0714 -0.1027 -1.7352 -4.7061 -2.9127 3.4227 1.8391 5.8697 'X-RAY DIFFRACTION' 4 ? refined 20.9699 30.3502 1.9366 0.1206 0.1246 0.1306 -0.0011 0.0116 0.0077 69.9183 551.8273 245.0231 35.1226 380.9407 -216.8514 -0.0868 0.7810 0.2091 1.7353 -0.1831 2.9098 0.2815 2.3546 0.2699 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 1 A 121 133 ? A A 'X-RAY DIFFRACTION' ? 2 2 B ? 134 B ? 134 ? A A 'X-RAY DIFFRACTION' ? 3 3 C ? 135 C ? 135 ? A A 'X-RAY DIFFRACTION' ? 4 4 D ? 136 D ? 136 ? A A 'X-RAY DIFFRACTION' ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DAO O1 O N N 88 DAO O2 O N N 89 DAO C1 C N N 90 DAO C2 C N N 91 DAO C3 C N N 92 DAO C4 C N N 93 DAO C5 C N N 94 DAO C6 C N N 95 DAO C7 C N N 96 DAO C8 C N N 97 DAO C9 C N N 98 DAO C10 C N N 99 DAO C11 C N N 100 DAO C12 C N N 101 DAO HO2 H N N 102 DAO H21 H N N 103 DAO H22 H N N 104 DAO H31 H N N 105 DAO H32 H N N 106 DAO H41 H N N 107 DAO H42 H N N 108 DAO H51 H N N 109 DAO H52 H N N 110 DAO H61 H N N 111 DAO H62 H N N 112 DAO H71 H N N 113 DAO H72 H N N 114 DAO H81 H N N 115 DAO H82 H N N 116 DAO H91 H N N 117 DAO H92 H N N 118 DAO H101 H N N 119 DAO H102 H N N 120 DAO H111 H N N 121 DAO H112 H N N 122 DAO H121 H N N 123 DAO H122 H N N 124 DAO H123 H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 GOL C1 C N N 175 GOL O1 O N N 176 GOL C2 C N N 177 GOL O2 O N N 178 GOL C3 C N N 179 GOL O3 O N N 180 GOL H11 H N N 181 GOL H12 H N N 182 GOL HO1 H N N 183 GOL H2 H N N 184 GOL HO2 H N N 185 GOL H31 H N N 186 GOL H32 H N N 187 GOL HO3 H N N 188 HIS N N N N 189 HIS CA C N S 190 HIS C C N N 191 HIS O O N N 192 HIS CB C N N 193 HIS CG C Y N 194 HIS ND1 N Y N 195 HIS CD2 C Y N 196 HIS CE1 C Y N 197 HIS NE2 N Y N 198 HIS OXT O N N 199 HIS H H N N 200 HIS H2 H N N 201 HIS HA H N N 202 HIS HB2 H N N 203 HIS HB3 H N N 204 HIS HD1 H N N 205 HIS HD2 H N N 206 HIS HE1 H N N 207 HIS HE2 H N N 208 HIS HXT H N N 209 HOH O O N N 210 HOH H1 H N N 211 HOH H2 H N N 212 ILE N N N N 213 ILE CA C N S 214 ILE C C N N 215 ILE O O N N 216 ILE CB C N S 217 ILE CG1 C N N 218 ILE CG2 C N N 219 ILE CD1 C N N 220 ILE OXT O N N 221 ILE H H N N 222 ILE H2 H N N 223 ILE HA H N N 224 ILE HB H N N 225 ILE HG12 H N N 226 ILE HG13 H N N 227 ILE HG21 H N N 228 ILE HG22 H N N 229 ILE HG23 H N N 230 ILE HD11 H N N 231 ILE HD12 H N N 232 ILE HD13 H N N 233 ILE HXT H N N 234 LEU N N N N 235 LEU CA C N S 236 LEU C C N N 237 LEU O O N N 238 LEU CB C N N 239 LEU CG C N N 240 LEU CD1 C N N 241 LEU CD2 C N N 242 LEU OXT O N N 243 LEU H H N N 244 LEU H2 H N N 245 LEU HA H N N 246 LEU HB2 H N N 247 LEU HB3 H N N 248 LEU HG H N N 249 LEU HD11 H N N 250 LEU HD12 H N N 251 LEU HD13 H N N 252 LEU HD21 H N N 253 LEU HD22 H N N 254 LEU HD23 H N N 255 LEU HXT H N N 256 LYS N N N N 257 LYS CA C N S 258 LYS C C N N 259 LYS O O N N 260 LYS CB C N N 261 LYS CG C N N 262 LYS CD C N N 263 LYS CE C N N 264 LYS NZ N N N 265 LYS OXT O N N 266 LYS H H N N 267 LYS H2 H N N 268 LYS HA H N N 269 LYS HB2 H N N 270 LYS HB3 H N N 271 LYS HG2 H N N 272 LYS HG3 H N N 273 LYS HD2 H N N 274 LYS HD3 H N N 275 LYS HE2 H N N 276 LYS HE3 H N N 277 LYS HZ1 H N N 278 LYS HZ2 H N N 279 LYS HZ3 H N N 280 LYS HXT H N N 281 MET N N N N 282 MET CA C N S 283 MET C C N N 284 MET O O N N 285 MET CB C N N 286 MET CG C N N 287 MET SD S N N 288 MET CE C N N 289 MET OXT O N N 290 MET H H N N 291 MET H2 H N N 292 MET HA H N N 293 MET HB2 H N N 294 MET HB3 H N N 295 MET HG2 H N N 296 MET HG3 H N N 297 MET HE1 H N N 298 MET HE2 H N N 299 MET HE3 H N N 300 MET HXT H N N 301 PHE N N N N 302 PHE CA C N S 303 PHE C C N N 304 PHE O O N N 305 PHE CB C N N 306 PHE CG C Y N 307 PHE CD1 C Y N 308 PHE CD2 C Y N 309 PHE CE1 C Y N 310 PHE CE2 C Y N 311 PHE CZ C Y N 312 PHE OXT O N N 313 PHE H H N N 314 PHE H2 H N N 315 PHE HA H N N 316 PHE HB2 H N N 317 PHE HB3 H N N 318 PHE HD1 H N N 319 PHE HD2 H N N 320 PHE HE1 H N N 321 PHE HE2 H N N 322 PHE HZ H N N 323 PHE HXT H N N 324 PRO N N N N 325 PRO CA C N S 326 PRO C C N N 327 PRO O O N N 328 PRO CB C N N 329 PRO CG C N N 330 PRO CD C N N 331 PRO OXT O N N 332 PRO H H N N 333 PRO HA H N N 334 PRO HB2 H N N 335 PRO HB3 H N N 336 PRO HG2 H N N 337 PRO HG3 H N N 338 PRO HD2 H N N 339 PRO HD3 H N N 340 PRO HXT H N N 341 SER N N N N 342 SER CA C N S 343 SER C C N N 344 SER O O N N 345 SER CB C N N 346 SER OG O N N 347 SER OXT O N N 348 SER H H N N 349 SER H2 H N N 350 SER HA H N N 351 SER HB2 H N N 352 SER HB3 H N N 353 SER HG H N N 354 SER HXT H N N 355 SO4 S S N N 356 SO4 O1 O N N 357 SO4 O2 O N N 358 SO4 O3 O N N 359 SO4 O4 O N N 360 THR N N N N 361 THR CA C N S 362 THR C C N N 363 THR O O N N 364 THR CB C N R 365 THR OG1 O N N 366 THR CG2 C N N 367 THR OXT O N N 368 THR H H N N 369 THR H2 H N N 370 THR HA H N N 371 THR HB H N N 372 THR HG1 H N N 373 THR HG21 H N N 374 THR HG22 H N N 375 THR HG23 H N N 376 THR HXT H N N 377 TRP N N N N 378 TRP CA C N S 379 TRP C C N N 380 TRP O O N N 381 TRP CB C N N 382 TRP CG C Y N 383 TRP CD1 C Y N 384 TRP CD2 C Y N 385 TRP NE1 N Y N 386 TRP CE2 C Y N 387 TRP CE3 C Y N 388 TRP CZ2 C Y N 389 TRP CZ3 C Y N 390 TRP CH2 C Y N 391 TRP OXT O N N 392 TRP H H N N 393 TRP H2 H N N 394 TRP HA H N N 395 TRP HB2 H N N 396 TRP HB3 H N N 397 TRP HD1 H N N 398 TRP HE1 H N N 399 TRP HE3 H N N 400 TRP HZ2 H N N 401 TRP HZ3 H N N 402 TRP HH2 H N N 403 TRP HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DAO O1 C1 doub N N 83 DAO O2 C1 sing N N 84 DAO O2 HO2 sing N N 85 DAO C1 C2 sing N N 86 DAO C2 C3 sing N N 87 DAO C2 H21 sing N N 88 DAO C2 H22 sing N N 89 DAO C3 C4 sing N N 90 DAO C3 H31 sing N N 91 DAO C3 H32 sing N N 92 DAO C4 C5 sing N N 93 DAO C4 H41 sing N N 94 DAO C4 H42 sing N N 95 DAO C5 C6 sing N N 96 DAO C5 H51 sing N N 97 DAO C5 H52 sing N N 98 DAO C6 C7 sing N N 99 DAO C6 H61 sing N N 100 DAO C6 H62 sing N N 101 DAO C7 C8 sing N N 102 DAO C7 H71 sing N N 103 DAO C7 H72 sing N N 104 DAO C8 C9 sing N N 105 DAO C8 H81 sing N N 106 DAO C8 H82 sing N N 107 DAO C9 C10 sing N N 108 DAO C9 H91 sing N N 109 DAO C9 H92 sing N N 110 DAO C10 C11 sing N N 111 DAO C10 H101 sing N N 112 DAO C10 H102 sing N N 113 DAO C11 C12 sing N N 114 DAO C11 H111 sing N N 115 DAO C11 H112 sing N N 116 DAO C12 H121 sing N N 117 DAO C12 H122 sing N N 118 DAO C12 H123 sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLU N CA sing N N 139 GLU N H sing N N 140 GLU N H2 sing N N 141 GLU CA C sing N N 142 GLU CA CB sing N N 143 GLU CA HA sing N N 144 GLU C O doub N N 145 GLU C OXT sing N N 146 GLU CB CG sing N N 147 GLU CB HB2 sing N N 148 GLU CB HB3 sing N N 149 GLU CG CD sing N N 150 GLU CG HG2 sing N N 151 GLU CG HG3 sing N N 152 GLU CD OE1 doub N N 153 GLU CD OE2 sing N N 154 GLU OE2 HE2 sing N N 155 GLU OXT HXT sing N N 156 GLY N CA sing N N 157 GLY N H sing N N 158 GLY N H2 sing N N 159 GLY CA C sing N N 160 GLY CA HA2 sing N N 161 GLY CA HA3 sing N N 162 GLY C O doub N N 163 GLY C OXT sing N N 164 GLY OXT HXT sing N N 165 GOL C1 O1 sing N N 166 GOL C1 C2 sing N N 167 GOL C1 H11 sing N N 168 GOL C1 H12 sing N N 169 GOL O1 HO1 sing N N 170 GOL C2 O2 sing N N 171 GOL C2 C3 sing N N 172 GOL C2 H2 sing N N 173 GOL O2 HO2 sing N N 174 GOL C3 O3 sing N N 175 GOL C3 H31 sing N N 176 GOL C3 H32 sing N N 177 GOL O3 HO3 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 SO4 S O1 doub N N 340 SO4 S O2 doub N N 341 SO4 S O3 sing N N 342 SO4 S O4 sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PPA _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1S8G _atom_sites.fract_transf_matrix[1][1] 0.012210 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012210 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020039 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_