data_1S9D # _entry.id 1S9D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1S9D pdb_00001s9d 10.2210/pdb1s9d/pdb RCSB RCSB021531 ? ? WWPDB D_1000021531 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2004-02-10 _pdbx_database_PDB_obs_spr.pdb_id 1S9D _pdbx_database_PDB_obs_spr.replace_pdb_id 1R8R _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1R8M 'Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A-Sensitizing Mutations' unspecified PDB 1PBV 'WILD TYPE SEC7 DOMAIN OF THE EXCHANGE FACTOR ARNO' unspecified PDB 1R8Q 'Full-Length Arf1-GDP-Mg In Complex With Brefeldin A and A Sec7 Domain' unspecified PDB 1R8S 'Arf1[D1-17]-GDP In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1S9D _pdbx_database_status.recvd_initial_deposition_date 2004-02-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Renault, L.' 1 'Guibert, B.' 2 'Cherfils, J.' 3 # _citation.id primary _citation.title 'Structural Snapshots of the Mechanism and Inhibition of a Guanine Nucleotide Exchange Factor' _citation.journal_abbrev Nature _citation.journal_volume 426 _citation.page_first 525 _citation.page_last 530 _citation.year 2003 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14654833 _citation.pdbx_database_id_DOI 10.1038/nature02197 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Renault, L.' 1 ? primary 'Guibert, B.' 2 ? primary 'Cherfils, J.' 3 ? # _cell.entry_id 1S9D _cell.length_a 111.462 _cell.length_b 111.462 _cell.length_c 74.534 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1S9D _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADP-Ribosylation Factor 1' 18822.455 1 ? ? 'Residues 18-181' ? 2 polymer man Arno 23514.754 1 ? F190Y,A191S,S198D,P208M 'Sec7 Domain (Residues 50-252)' ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 5 non-polymer syn '1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE' 280.359 1 ? ? ? ? 6 water nat water 18.015 286 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'ARF nucleotide-binding site opener, Cytohesin 2, ARF exchange factor' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR ERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL RNQK ; ;MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR ERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL RNQK ; A ? 2 'polypeptide(L)' no yes ;LEANEGSKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAF VDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCL(CME)NPGVFQSTDTCYVLSYSVIMLNTDLHNPNVR DKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGND ; ;LEANEGSKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAF VDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYVLSYSVIMLNTDLHNPNVRDKMG LERFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGND ; E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 ILE n 1 4 LEU n 1 5 MET n 1 6 VAL n 1 7 GLY n 1 8 LEU n 1 9 ASP n 1 10 ALA n 1 11 ALA n 1 12 GLY n 1 13 LYS n 1 14 THR n 1 15 THR n 1 16 ILE n 1 17 LEU n 1 18 TYR n 1 19 LYS n 1 20 LEU n 1 21 LYS n 1 22 LEU n 1 23 GLY n 1 24 GLU n 1 25 ILE n 1 26 VAL n 1 27 THR n 1 28 THR n 1 29 ILE n 1 30 PRO n 1 31 THR n 1 32 ILE n 1 33 GLY n 1 34 PHE n 1 35 ASN n 1 36 VAL n 1 37 GLU n 1 38 THR n 1 39 VAL n 1 40 GLU n 1 41 TYR n 1 42 LYS n 1 43 ASN n 1 44 ILE n 1 45 SER n 1 46 PHE n 1 47 THR n 1 48 VAL n 1 49 TRP n 1 50 ASP n 1 51 VAL n 1 52 GLY n 1 53 GLY n 1 54 GLN n 1 55 ASP n 1 56 LYS n 1 57 ILE n 1 58 ARG n 1 59 PRO n 1 60 LEU n 1 61 TRP n 1 62 ARG n 1 63 HIS n 1 64 TYR n 1 65 PHE n 1 66 GLN n 1 67 ASN n 1 68 THR n 1 69 GLN n 1 70 GLY n 1 71 LEU n 1 72 ILE n 1 73 PHE n 1 74 VAL n 1 75 VAL n 1 76 ASP n 1 77 SER n 1 78 ASN n 1 79 ASP n 1 80 ARG n 1 81 GLU n 1 82 ARG n 1 83 VAL n 1 84 ASN n 1 85 GLU n 1 86 ALA n 1 87 ARG n 1 88 GLU n 1 89 GLU n 1 90 LEU n 1 91 MET n 1 92 ARG n 1 93 MET n 1 94 LEU n 1 95 ALA n 1 96 GLU n 1 97 ASP n 1 98 GLU n 1 99 LEU n 1 100 ARG n 1 101 ASP n 1 102 ALA n 1 103 VAL n 1 104 LEU n 1 105 LEU n 1 106 VAL n 1 107 PHE n 1 108 ALA n 1 109 ASN n 1 110 LYS n 1 111 GLN n 1 112 ASP n 1 113 LEU n 1 114 PRO n 1 115 ASN n 1 116 ALA n 1 117 MET n 1 118 ASN n 1 119 ALA n 1 120 ALA n 1 121 GLU n 1 122 ILE n 1 123 THR n 1 124 ASP n 1 125 LYS n 1 126 LEU n 1 127 GLY n 1 128 LEU n 1 129 HIS n 1 130 SER n 1 131 LEU n 1 132 ARG n 1 133 HIS n 1 134 ARG n 1 135 ASN n 1 136 TRP n 1 137 TYR n 1 138 ILE n 1 139 GLN n 1 140 ALA n 1 141 THR n 1 142 CYS n 1 143 ALA n 1 144 THR n 1 145 SER n 1 146 GLY n 1 147 ASP n 1 148 GLY n 1 149 LEU n 1 150 TYR n 1 151 GLU n 1 152 GLY n 1 153 LEU n 1 154 ASP n 1 155 TRP n 1 156 LEU n 1 157 SER n 1 158 ASN n 1 159 GLN n 1 160 LEU n 1 161 ARG n 1 162 ASN n 1 163 GLN n 1 164 LYS n 2 1 LEU n 2 2 GLU n 2 3 ALA n 2 4 ASN n 2 5 GLU n 2 6 GLY n 2 7 SER n 2 8 LYS n 2 9 THR n 2 10 LEU n 2 11 GLN n 2 12 ARG n 2 13 ASN n 2 14 ARG n 2 15 LYS n 2 16 MET n 2 17 ALA n 2 18 MET n 2 19 GLY n 2 20 ARG n 2 21 LYS n 2 22 LYS n 2 23 PHE n 2 24 ASN n 2 25 MET n 2 26 ASP n 2 27 PRO n 2 28 LYS n 2 29 LYS n 2 30 GLY n 2 31 ILE n 2 32 GLN n 2 33 PHE n 2 34 LEU n 2 35 VAL n 2 36 GLU n 2 37 ASN n 2 38 GLU n 2 39 LEU n 2 40 LEU n 2 41 GLN n 2 42 ASN n 2 43 THR n 2 44 PRO n 2 45 GLU n 2 46 GLU n 2 47 ILE n 2 48 ALA n 2 49 ARG n 2 50 PHE n 2 51 LEU n 2 52 TYR n 2 53 LYS n 2 54 GLY n 2 55 GLU n 2 56 GLY n 2 57 LEU n 2 58 ASN n 2 59 LYS n 2 60 THR n 2 61 ALA n 2 62 ILE n 2 63 GLY n 2 64 ASP n 2 65 TYR n 2 66 LEU n 2 67 GLY n 2 68 GLU n 2 69 ARG n 2 70 GLU n 2 71 GLU n 2 72 LEU n 2 73 ASN n 2 74 LEU n 2 75 ALA n 2 76 VAL n 2 77 LEU n 2 78 HIS n 2 79 ALA n 2 80 PHE n 2 81 VAL n 2 82 ASP n 2 83 LEU n 2 84 HIS n 2 85 GLU n 2 86 PHE n 2 87 THR n 2 88 ASP n 2 89 LEU n 2 90 ASN n 2 91 LEU n 2 92 VAL n 2 93 GLN n 2 94 ALA n 2 95 LEU n 2 96 ARG n 2 97 GLN n 2 98 PHE n 2 99 LEU n 2 100 TRP n 2 101 SER n 2 102 PHE n 2 103 ARG n 2 104 LEU n 2 105 PRO n 2 106 GLY n 2 107 GLU n 2 108 ALA n 2 109 GLN n 2 110 LYS n 2 111 ILE n 2 112 ASP n 2 113 ARG n 2 114 MET n 2 115 MET n 2 116 GLU n 2 117 ALA n 2 118 PHE n 2 119 ALA n 2 120 GLN n 2 121 ARG n 2 122 TYR n 2 123 CYS n 2 124 LEU n 2 125 CME n 2 126 ASN n 2 127 PRO n 2 128 GLY n 2 129 VAL n 2 130 PHE n 2 131 GLN n 2 132 SER n 2 133 THR n 2 134 ASP n 2 135 THR n 2 136 CYS n 2 137 TYR n 2 138 VAL n 2 139 LEU n 2 140 SER n 2 141 TYR n 2 142 SER n 2 143 VAL n 2 144 ILE n 2 145 MET n 2 146 LEU n 2 147 ASN n 2 148 THR n 2 149 ASP n 2 150 LEU n 2 151 HIS n 2 152 ASN n 2 153 PRO n 2 154 ASN n 2 155 VAL n 2 156 ARG n 2 157 ASP n 2 158 LYS n 2 159 MET n 2 160 GLY n 2 161 LEU n 2 162 GLU n 2 163 ARG n 2 164 PHE n 2 165 VAL n 2 166 ALA n 2 167 MET n 2 168 ASN n 2 169 ARG n 2 170 GLY n 2 171 ILE n 2 172 ASN n 2 173 GLU n 2 174 GLY n 2 175 GLY n 2 176 ASP n 2 177 LEU n 2 178 PRO n 2 179 GLU n 2 180 GLU n 2 181 LEU n 2 182 LEU n 2 183 ARG n 2 184 ASN n 2 185 LEU n 2 186 TYR n 2 187 ASP n 2 188 SER n 2 189 ILE n 2 190 ARG n 2 191 ASN n 2 192 GLU n 2 193 PRO n 2 194 PHE n 2 195 LYS n 2 196 ILE n 2 197 PRO n 2 198 GLU n 2 199 ASP n 2 200 ASP n 2 201 GLY n 2 202 ASN n 2 203 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? cattle Bos arf1 ? ? ? ? ? ? 'Bos taurus' 9913 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 'BL21 GOLD' ? ? ? ? ? ? ? PLASMID ? ? ? PET11A ? ? 2 1 sample ? ? ? human Homo 'PSCD2, ARNO' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 'BL21 GOLD' ? ? ? ? ? ? ? PLASMID ? ? ? PET11D ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ARF1_BOVIN P84080 1 ;MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR ERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL RNQK ; 17 ? 2 UNP CYH2_HUMAN Q99418 2 ;LEANEGSKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAF VDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYVLSFAVIMLNTSLHNPNVRDKPG LERFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGND ; 50 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1S9D A 1 ? 164 ? P84080 17 ? 180 ? 18 181 2 2 1S9D E 1 ? 203 ? Q99418 50 ? 252 ? 50 252 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 1S9D CME E 125 ? UNP Q99418 CYS 174 'modified residue' 174 1 2 1S9D TYR E 141 ? UNP Q99418 PHE 190 'engineered mutation' 190 2 2 1S9D SER E 142 ? UNP Q99418 ALA 191 'engineered mutation' 191 3 2 1S9D ASP E 149 ? UNP Q99418 SER 198 'engineered mutation' 198 4 2 1S9D MET E 159 ? UNP Q99418 PRO 208 'engineered mutation' 208 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AFB non-polymer . '1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE' 'BREFELDIN A' 'C16 H24 O4' 280.359 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CME 'L-peptide linking' n 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' ? 'C5 H11 N O3 S2' 197.276 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1S9D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.00 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.73 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '29% PEG 3350, 40MM NH4CL, 40MM POTASSIUM FORMATE, 100MM TRIS, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-04-26 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double Si crystals' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.980 # _reflns.entry_id 1S9D _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.80 _reflns.number_obs 43814 _reflns.number_all 43814 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_sigmaI 26.2 _reflns.B_iso_Wilson_estimate 22.76 _reflns.pdbx_redundancy 12 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 97.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.405 _reflns_shell.meanI_over_sigI_obs 6.4 _reflns_shell.pdbx_redundancy 12.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3319 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1S9D _refine.ls_number_reflns_obs 41588 _refine.ls_number_reflns_all 43814 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.88 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.54 _refine.ls_R_factor_obs 0.18397 _refine.ls_R_factor_all 0.184 _refine.ls_R_factor_R_work 0.18193 _refine.ls_R_factor_R_free 0.22148 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2225 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 19.910 _refine.aniso_B[1][1] -1.95 _refine.aniso_B[2][2] -1.95 _refine.aniso_B[3][3] 3.89 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1RRG and coordinates of arf1[D1-17]/Gea2-Sec7 (Goldberg, J., (1998) Cell 95(2): 237-48)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.111 _refine.pdbx_overall_ESU_R_Free 0.112 _refine.overall_SU_ML 0.084 _refine.overall_SU_B 2.786 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2830 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 286 _refine_hist.number_atoms_total 3165 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 29.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.025 0.021 ? 2942 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2646 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.940 1.977 ? 3974 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.999 3.000 ? 6146 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.862 5.000 ? 345 'X-RAY DIFFRACTION' ? r_chiral_restr 0.128 0.200 ? 435 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 3218 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.006 0.020 ? 598 'X-RAY DIFFRACTION' ? r_nbd_refined 0.226 0.200 ? 638 'X-RAY DIFFRACTION' ? r_nbd_other 0.256 0.200 ? 3246 'X-RAY DIFFRACTION' ? r_nbtor_other 0.090 0.200 ? 1682 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.176 0.200 ? 231 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.249 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.284 0.200 ? 57 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.148 0.200 ? 19 'X-RAY DIFFRACTION' ? r_mcbond_it 1.233 1.500 ? 1728 'X-RAY DIFFRACTION' ? r_mcangle_it 2.081 2.000 ? 2781 'X-RAY DIFFRACTION' ? r_scbond_it 3.243 3.000 ? 1214 'X-RAY DIFFRACTION' ? r_scangle_it 5.065 4.500 ? 1193 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 19 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.849 _refine_ls_shell.number_reflns_R_work 3171 _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.245 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 181 _refine_ls_shell.number_reflns_obs 3171 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1S9D _struct.title 'ARF1[DELTA 1-17]-GDP-MG IN COMPLEX WITH BREFELDIN A AND A SEC7 DOMAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1S9D _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT/EXCHANGE FACTOR' _struct_keywords.text 'PROTEIN TRANSPORT/EXCHANGE FACTOR, PROTEIN TRANSPORT-EXCHANGE FACTOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # _struct_biol.id 1 _struct_biol.details 'the biological unit consists of a quaternary complex with 2 proteins (chain A and E) and is identical to the asymmetric unit.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 12 ? LYS A 21 ? GLY A 29 LYS A 38 1 ? 10 HELX_P HELX_P2 2 GLN A 54 ? GLN A 66 ? GLN A 71 GLN A 83 5 ? 13 HELX_P HELX_P3 3 ASP A 79 ? GLU A 81 ? ASP A 96 GLU A 98 5 ? 3 HELX_P HELX_P4 4 ARG A 82 ? ALA A 95 ? ARG A 99 ALA A 112 1 ? 14 HELX_P HELX_P5 5 GLU A 96 ? ARG A 100 ? GLU A 113 ARG A 117 5 ? 5 HELX_P HELX_P6 6 ASN A 118 ? LEU A 126 ? ASN A 135 LEU A 143 1 ? 9 HELX_P HELX_P7 7 GLY A 127 ? LEU A 131 ? GLY A 144 LEU A 148 5 ? 5 HELX_P HELX_P8 8 GLY A 148 ? ARG A 161 ? GLY A 165 ARG A 178 1 ? 14 HELX_P HELX_P9 9 LYS B 8 ? ASP B 26 ? LYS E 57 ASP E 75 1 ? 19 HELX_P HELX_P10 10 ASP B 26 ? ASN B 37 ? ASP E 75 ASN E 86 1 ? 12 HELX_P HELX_P11 11 THR B 43 ? TYR B 52 ? THR E 92 TYR E 101 1 ? 10 HELX_P HELX_P12 12 ASN B 58 ? GLY B 67 ? ASN E 107 GLY E 116 1 ? 10 HELX_P HELX_P13 13 GLU B 70 ? ASP B 82 ? GLU E 119 ASP E 131 1 ? 13 HELX_P HELX_P14 14 ASN B 90 ? LEU B 99 ? ASN E 139 LEU E 148 1 ? 10 HELX_P HELX_P15 15 GLU B 107 ? ASN B 126 ? GLU E 156 ASN E 175 1 ? 20 HELX_P HELX_P16 16 SER B 132 ? ASN B 152 ? SER E 181 ASN E 201 1 ? 21 HELX_P HELX_P17 17 GLY B 160 ? ASN B 168 ? GLY E 209 ASN E 217 1 ? 9 HELX_P HELX_P18 18 PRO B 178 ? GLU B 192 ? PRO E 227 GLU E 241 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B LEU 124 C ? ? ? 1_555 B CME 125 N ? ? E LEU 173 E CME 174 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale2 covale both ? B CME 125 C ? ? ? 1_555 B ASN 126 N ? ? E CME 174 E ASN 175 1_555 ? ? ? ? ? ? ? 1.328 ? ? metalc1 metalc ? ? A THR 14 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 31 A MG 402 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc2 metalc ? ? D GDP . O1B ? ? ? 1_555 C MG . MG ? ? A GDP 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 419 1_555 ? ? ? ? ? ? ? 2.046 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 432 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 458 1_555 ? ? ? ? ? ? ? 2.195 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 544 1_555 ? ? ? ? ? ? ? 2.126 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 38 ? TYR A 41 ? THR A 55 TYR A 58 A 2 ILE A 44 ? VAL A 48 ? ILE A 61 VAL A 65 A 3 ILE A 3 ? VAL A 6 ? ILE A 20 VAL A 23 A 4 GLY A 70 ? ASP A 76 ? GLY A 87 ASP A 93 A 5 VAL A 103 ? ASN A 109 ? VAL A 120 ASN A 126 A 6 TRP A 136 ? ALA A 140 ? TRP A 153 ALA A 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 39 ? N VAL A 56 O PHE A 46 ? O PHE A 63 A 2 3 O THR A 47 ? O THR A 64 N MET A 5 ? N MET A 22 A 3 4 N LEU A 4 ? N LEU A 21 O ILE A 72 ? O ILE A 89 A 4 5 N LEU A 71 ? N LEU A 88 O VAL A 103 ? O VAL A 120 A 5 6 N VAL A 106 ? N VAL A 123 O TYR A 137 ? O TYR A 154 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 402 ? 6 'BINDING SITE FOR RESIDUE MG A 402' AC2 Software A GDP 401 ? 23 'BINDING SITE FOR RESIDUE GDP A 401' AC3 Software A AFB 403 ? 11 'BINDING SITE FOR RESIDUE AFB A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 THR A 14 ? THR A 31 . ? 1_555 ? 2 AC1 6 GDP D . ? GDP A 401 . ? 1_555 ? 3 AC1 6 HOH F . ? HOH A 419 . ? 1_555 ? 4 AC1 6 HOH F . ? HOH A 432 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH A 458 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 544 . ? 1_555 ? 7 AC2 23 ALA A 10 ? ALA A 27 . ? 1_555 ? 8 AC2 23 ALA A 11 ? ALA A 28 . ? 1_555 ? 9 AC2 23 GLY A 12 ? GLY A 29 . ? 1_555 ? 10 AC2 23 LYS A 13 ? LYS A 30 . ? 1_555 ? 11 AC2 23 THR A 14 ? THR A 31 . ? 1_555 ? 12 AC2 23 THR A 15 ? THR A 32 . ? 1_555 ? 13 AC2 23 ASN A 109 ? ASN A 126 . ? 1_555 ? 14 AC2 23 LYS A 110 ? LYS A 127 . ? 1_555 ? 15 AC2 23 ASP A 112 ? ASP A 129 . ? 1_555 ? 16 AC2 23 LEU A 113 ? LEU A 130 . ? 1_555 ? 17 AC2 23 CYS A 142 ? CYS A 159 . ? 1_555 ? 18 AC2 23 ALA A 143 ? ALA A 160 . ? 1_555 ? 19 AC2 23 THR A 144 ? THR A 161 . ? 1_555 ? 20 AC2 23 MG C . ? MG A 402 . ? 1_555 ? 21 AC2 23 HOH F . ? HOH A 419 . ? 1_555 ? 22 AC2 23 HOH F . ? HOH A 452 . ? 1_555 ? 23 AC2 23 HOH F . ? HOH A 458 . ? 1_555 ? 24 AC2 23 HOH F . ? HOH A 464 . ? 1_555 ? 25 AC2 23 HOH F . ? HOH A 482 . ? 1_555 ? 26 AC2 23 HOH F . ? HOH A 490 . ? 1_555 ? 27 AC2 23 HOH F . ? HOH A 500 . ? 1_555 ? 28 AC2 23 HOH F . ? HOH A 512 . ? 3_545 ? 29 AC2 23 HOH F . ? HOH A 543 . ? 1_555 ? 30 AC3 11 VAL A 36 ? VAL A 53 . ? 1_555 ? 31 AC3 11 THR A 47 ? THR A 64 . ? 1_555 ? 32 AC3 11 TRP A 49 ? TRP A 66 . ? 1_555 ? 33 AC3 11 ASP A 50 ? ASP A 67 . ? 1_555 ? 34 AC3 11 TRP A 61 ? TRP A 78 . ? 1_555 ? 35 AC3 11 TYR A 64 ? TYR A 81 . ? 1_555 ? 36 AC3 11 HOH F . ? HOH A 438 . ? 1_555 ? 37 AC3 11 HOH F . ? HOH A 446 . ? 1_555 ? 38 AC3 11 HOH F . ? HOH A 469 . ? 1_555 ? 39 AC3 11 TYR B 141 ? TYR E 190 . ? 1_555 ? 40 AC3 11 MET B 145 ? MET E 194 . ? 1_555 ? # _database_PDB_matrix.entry_id 1S9D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1S9D _atom_sites.fract_transf_matrix[1][1] 0.008972 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008972 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013417 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 18 18 MET MET A . n A 1 2 ARG 2 19 19 ARG ARG A . n A 1 3 ILE 3 20 20 ILE ILE A . n A 1 4 LEU 4 21 21 LEU LEU A . n A 1 5 MET 5 22 22 MET MET A . n A 1 6 VAL 6 23 23 VAL VAL A . n A 1 7 GLY 7 24 24 GLY GLY A . n A 1 8 LEU 8 25 25 LEU LEU A . n A 1 9 ASP 9 26 26 ASP ASP A . n A 1 10 ALA 10 27 27 ALA ALA A . n A 1 11 ALA 11 28 28 ALA ALA A . n A 1 12 GLY 12 29 29 GLY GLY A . n A 1 13 LYS 13 30 30 LYS LYS A . n A 1 14 THR 14 31 31 THR THR A . n A 1 15 THR 15 32 32 THR THR A . n A 1 16 ILE 16 33 33 ILE ILE A . n A 1 17 LEU 17 34 34 LEU LEU A . n A 1 18 TYR 18 35 35 TYR TYR A . n A 1 19 LYS 19 36 36 LYS LYS A . n A 1 20 LEU 20 37 37 LEU LEU A . n A 1 21 LYS 21 38 38 LYS LYS A . n A 1 22 LEU 22 39 ? ? ? A . n A 1 23 GLY 23 40 ? ? ? A . n A 1 24 GLU 24 41 ? ? ? A . n A 1 25 ILE 25 42 ? ? ? A . n A 1 26 VAL 26 43 ? ? ? A . n A 1 27 THR 27 44 ? ? ? A . n A 1 28 THR 28 45 45 THR THR A . n A 1 29 ILE 29 46 46 ILE ILE A . n A 1 30 PRO 30 47 47 PRO PRO A . n A 1 31 THR 31 48 48 THR THR A . n A 1 32 ILE 32 49 49 ILE ILE A . n A 1 33 GLY 33 50 50 GLY GLY A . n A 1 34 PHE 34 51 51 PHE PHE A . n A 1 35 ASN 35 52 52 ASN ASN A . n A 1 36 VAL 36 53 53 VAL VAL A . n A 1 37 GLU 37 54 54 GLU GLU A . n A 1 38 THR 38 55 55 THR THR A . n A 1 39 VAL 39 56 56 VAL VAL A . n A 1 40 GLU 40 57 57 GLU GLU A . n A 1 41 TYR 41 58 58 TYR TYR A . n A 1 42 LYS 42 59 59 LYS LYS A . n A 1 43 ASN 43 60 60 ASN ASN A . n A 1 44 ILE 44 61 61 ILE ILE A . n A 1 45 SER 45 62 62 SER SER A . n A 1 46 PHE 46 63 63 PHE PHE A . n A 1 47 THR 47 64 64 THR THR A . n A 1 48 VAL 48 65 65 VAL VAL A . n A 1 49 TRP 49 66 66 TRP TRP A . n A 1 50 ASP 50 67 67 ASP ASP A . n A 1 51 VAL 51 68 68 VAL VAL A . n A 1 52 GLY 52 69 69 GLY GLY A . n A 1 53 GLY 53 70 70 GLY GLY A . n A 1 54 GLN 54 71 71 GLN GLN A . n A 1 55 ASP 55 72 72 ASP ASP A . n A 1 56 LYS 56 73 73 LYS LYS A . n A 1 57 ILE 57 74 74 ILE ILE A . n A 1 58 ARG 58 75 75 ARG ARG A . n A 1 59 PRO 59 76 76 PRO PRO A . n A 1 60 LEU 60 77 77 LEU LEU A . n A 1 61 TRP 61 78 78 TRP TRP A . n A 1 62 ARG 62 79 79 ARG ARG A . n A 1 63 HIS 63 80 80 HIS HIS A . n A 1 64 TYR 64 81 81 TYR TYR A . n A 1 65 PHE 65 82 82 PHE PHE A . n A 1 66 GLN 66 83 83 GLN GLN A . n A 1 67 ASN 67 84 84 ASN ASN A . n A 1 68 THR 68 85 85 THR THR A . n A 1 69 GLN 69 86 86 GLN GLN A . n A 1 70 GLY 70 87 87 GLY GLY A . n A 1 71 LEU 71 88 88 LEU LEU A . n A 1 72 ILE 72 89 89 ILE ILE A . n A 1 73 PHE 73 90 90 PHE PHE A . n A 1 74 VAL 74 91 91 VAL VAL A . n A 1 75 VAL 75 92 92 VAL VAL A . n A 1 76 ASP 76 93 93 ASP ASP A . n A 1 77 SER 77 94 94 SER SER A . n A 1 78 ASN 78 95 95 ASN ASN A . n A 1 79 ASP 79 96 96 ASP ASP A . n A 1 80 ARG 80 97 97 ARG ARG A . n A 1 81 GLU 81 98 98 GLU GLU A . n A 1 82 ARG 82 99 99 ARG ARG A . n A 1 83 VAL 83 100 100 VAL VAL A . n A 1 84 ASN 84 101 101 ASN ASN A . n A 1 85 GLU 85 102 102 GLU GLU A . n A 1 86 ALA 86 103 103 ALA ALA A . n A 1 87 ARG 87 104 104 ARG ARG A . n A 1 88 GLU 88 105 105 GLU GLU A . n A 1 89 GLU 89 106 106 GLU GLU A . n A 1 90 LEU 90 107 107 LEU LEU A . n A 1 91 MET 91 108 108 MET MET A . n A 1 92 ARG 92 109 109 ARG ARG A . n A 1 93 MET 93 110 110 MET MET A . n A 1 94 LEU 94 111 111 LEU LEU A . n A 1 95 ALA 95 112 112 ALA ALA A . n A 1 96 GLU 96 113 113 GLU GLU A . n A 1 97 ASP 97 114 114 ASP ASP A . n A 1 98 GLU 98 115 115 GLU GLU A . n A 1 99 LEU 99 116 116 LEU LEU A . n A 1 100 ARG 100 117 117 ARG ARG A . n A 1 101 ASP 101 118 118 ASP ASP A . n A 1 102 ALA 102 119 119 ALA ALA A . n A 1 103 VAL 103 120 120 VAL VAL A . n A 1 104 LEU 104 121 121 LEU LEU A . n A 1 105 LEU 105 122 122 LEU LEU A . n A 1 106 VAL 106 123 123 VAL VAL A . n A 1 107 PHE 107 124 124 PHE PHE A . n A 1 108 ALA 108 125 125 ALA ALA A . n A 1 109 ASN 109 126 126 ASN ASN A . n A 1 110 LYS 110 127 127 LYS LYS A . n A 1 111 GLN 111 128 128 GLN GLN A . n A 1 112 ASP 112 129 129 ASP ASP A . n A 1 113 LEU 113 130 130 LEU LEU A . n A 1 114 PRO 114 131 131 PRO PRO A . n A 1 115 ASN 115 132 132 ASN ASN A . n A 1 116 ALA 116 133 133 ALA ALA A . n A 1 117 MET 117 134 134 MET MET A . n A 1 118 ASN 118 135 135 ASN ASN A . n A 1 119 ALA 119 136 136 ALA ALA A . n A 1 120 ALA 120 137 137 ALA ALA A . n A 1 121 GLU 121 138 138 GLU GLU A . n A 1 122 ILE 122 139 139 ILE ILE A . n A 1 123 THR 123 140 140 THR THR A . n A 1 124 ASP 124 141 141 ASP ASP A . n A 1 125 LYS 125 142 142 LYS LYS A . n A 1 126 LEU 126 143 143 LEU LEU A . n A 1 127 GLY 127 144 144 GLY GLY A . n A 1 128 LEU 128 145 145 LEU LEU A . n A 1 129 HIS 129 146 146 HIS HIS A . n A 1 130 SER 130 147 147 SER SER A . n A 1 131 LEU 131 148 148 LEU LEU A . n A 1 132 ARG 132 149 149 ARG ARG A . n A 1 133 HIS 133 150 150 HIS HIS A . n A 1 134 ARG 134 151 151 ARG ARG A . n A 1 135 ASN 135 152 152 ASN ASN A . n A 1 136 TRP 136 153 153 TRP TRP A . n A 1 137 TYR 137 154 154 TYR TYR A . n A 1 138 ILE 138 155 155 ILE ILE A . n A 1 139 GLN 139 156 156 GLN GLN A . n A 1 140 ALA 140 157 157 ALA ALA A . n A 1 141 THR 141 158 158 THR THR A . n A 1 142 CYS 142 159 159 CYS CYS A . n A 1 143 ALA 143 160 160 ALA ALA A . n A 1 144 THR 144 161 161 THR THR A . n A 1 145 SER 145 162 162 SER SER A . n A 1 146 GLY 146 163 163 GLY GLY A . n A 1 147 ASP 147 164 164 ASP ASP A . n A 1 148 GLY 148 165 165 GLY GLY A . n A 1 149 LEU 149 166 166 LEU LEU A . n A 1 150 TYR 150 167 167 TYR TYR A . n A 1 151 GLU 151 168 168 GLU GLU A . n A 1 152 GLY 152 169 169 GLY GLY A . n A 1 153 LEU 153 170 170 LEU LEU A . n A 1 154 ASP 154 171 171 ASP ASP A . n A 1 155 TRP 155 172 172 TRP TRP A . n A 1 156 LEU 156 173 173 LEU LEU A . n A 1 157 SER 157 174 174 SER SER A . n A 1 158 ASN 158 175 175 ASN ASN A . n A 1 159 GLN 159 176 176 GLN GLN A . n A 1 160 LEU 160 177 177 LEU LEU A . n A 1 161 ARG 161 178 178 ARG ARG A . n A 1 162 ASN 162 179 ? ? ? A . n A 1 163 GLN 163 180 ? ? ? A . n A 1 164 LYS 164 181 ? ? ? A . n B 2 1 LEU 1 50 ? ? ? E . n B 2 2 GLU 2 51 ? ? ? E . n B 2 3 ALA 3 52 ? ? ? E . n B 2 4 ASN 4 53 ? ? ? E . n B 2 5 GLU 5 54 ? ? ? E . n B 2 6 GLY 6 55 ? ? ? E . n B 2 7 SER 7 56 ? ? ? E . n B 2 8 LYS 8 57 57 LYS LYS E . n B 2 9 THR 9 58 58 THR THR E . n B 2 10 LEU 10 59 59 LEU LEU E . n B 2 11 GLN 11 60 60 GLN GLN E . n B 2 12 ARG 12 61 61 ARG ARG E . n B 2 13 ASN 13 62 62 ASN ASN E . n B 2 14 ARG 14 63 63 ARG ARG E . n B 2 15 LYS 15 64 64 LYS LYS E . n B 2 16 MET 16 65 65 MET MET E . n B 2 17 ALA 17 66 66 ALA ALA E . n B 2 18 MET 18 67 67 MET MET E . n B 2 19 GLY 19 68 68 GLY GLY E . n B 2 20 ARG 20 69 69 ARG ARG E . n B 2 21 LYS 21 70 70 LYS LYS E . n B 2 22 LYS 22 71 71 LYS LYS E . n B 2 23 PHE 23 72 72 PHE PHE E . n B 2 24 ASN 24 73 73 ASN ASN E . n B 2 25 MET 25 74 74 MET MET E . n B 2 26 ASP 26 75 75 ASP ASP E . n B 2 27 PRO 27 76 76 PRO PRO E . n B 2 28 LYS 28 77 77 LYS LYS E . n B 2 29 LYS 29 78 78 LYS LYS E . n B 2 30 GLY 30 79 79 GLY GLY E . n B 2 31 ILE 31 80 80 ILE ILE E . n B 2 32 GLN 32 81 81 GLN GLN E . n B 2 33 PHE 33 82 82 PHE PHE E . n B 2 34 LEU 34 83 83 LEU LEU E . n B 2 35 VAL 35 84 84 VAL VAL E . n B 2 36 GLU 36 85 85 GLU GLU E . n B 2 37 ASN 37 86 86 ASN ASN E . n B 2 38 GLU 38 87 87 GLU GLU E . n B 2 39 LEU 39 88 88 LEU LEU E . n B 2 40 LEU 40 89 89 LEU LEU E . n B 2 41 GLN 41 90 90 GLN GLN E . n B 2 42 ASN 42 91 91 ASN ASN E . n B 2 43 THR 43 92 92 THR THR E . n B 2 44 PRO 44 93 93 PRO PRO E . n B 2 45 GLU 45 94 94 GLU GLU E . n B 2 46 GLU 46 95 95 GLU GLU E . n B 2 47 ILE 47 96 96 ILE ILE E . n B 2 48 ALA 48 97 97 ALA ALA E . n B 2 49 ARG 49 98 98 ARG ARG E . n B 2 50 PHE 50 99 99 PHE PHE E . n B 2 51 LEU 51 100 100 LEU LEU E . n B 2 52 TYR 52 101 101 TYR TYR E . n B 2 53 LYS 53 102 102 LYS LYS E . n B 2 54 GLY 54 103 103 GLY GLY E . n B 2 55 GLU 55 104 104 GLU GLU E . n B 2 56 GLY 56 105 105 GLY GLY E . n B 2 57 LEU 57 106 106 LEU LEU E . n B 2 58 ASN 58 107 107 ASN ASN E . n B 2 59 LYS 59 108 108 LYS LYS E . n B 2 60 THR 60 109 109 THR THR E . n B 2 61 ALA 61 110 110 ALA ALA E . n B 2 62 ILE 62 111 111 ILE ILE E . n B 2 63 GLY 63 112 112 GLY GLY E . n B 2 64 ASP 64 113 113 ASP ASP E . n B 2 65 TYR 65 114 114 TYR TYR E . n B 2 66 LEU 66 115 115 LEU LEU E . n B 2 67 GLY 67 116 116 GLY GLY E . n B 2 68 GLU 68 117 117 GLU GLU E . n B 2 69 ARG 69 118 118 ARG ARG E . n B 2 70 GLU 70 119 119 GLU GLU E . n B 2 71 GLU 71 120 120 GLU GLU E . n B 2 72 LEU 72 121 121 LEU LEU E . n B 2 73 ASN 73 122 122 ASN ASN E . n B 2 74 LEU 74 123 123 LEU LEU E . n B 2 75 ALA 75 124 124 ALA ALA E . n B 2 76 VAL 76 125 125 VAL VAL E . n B 2 77 LEU 77 126 126 LEU LEU E . n B 2 78 HIS 78 127 127 HIS HIS E . n B 2 79 ALA 79 128 128 ALA ALA E . n B 2 80 PHE 80 129 129 PHE PHE E . n B 2 81 VAL 81 130 130 VAL VAL E . n B 2 82 ASP 82 131 131 ASP ASP E . n B 2 83 LEU 83 132 132 LEU LEU E . n B 2 84 HIS 84 133 133 HIS HIS E . n B 2 85 GLU 85 134 134 GLU GLU E . n B 2 86 PHE 86 135 135 PHE PHE E . n B 2 87 THR 87 136 136 THR THR E . n B 2 88 ASP 88 137 137 ASP ASP E . n B 2 89 LEU 89 138 138 LEU LEU E . n B 2 90 ASN 90 139 139 ASN ASN E . n B 2 91 LEU 91 140 140 LEU LEU E . n B 2 92 VAL 92 141 141 VAL VAL E . n B 2 93 GLN 93 142 142 GLN GLN E . n B 2 94 ALA 94 143 143 ALA ALA E . n B 2 95 LEU 95 144 144 LEU LEU E . n B 2 96 ARG 96 145 145 ARG ARG E . n B 2 97 GLN 97 146 146 GLN GLN E . n B 2 98 PHE 98 147 147 PHE PHE E . n B 2 99 LEU 99 148 148 LEU LEU E . n B 2 100 TRP 100 149 149 TRP TRP E . n B 2 101 SER 101 150 150 SER SER E . n B 2 102 PHE 102 151 151 PHE PHE E . n B 2 103 ARG 103 152 152 ARG ARG E . n B 2 104 LEU 104 153 153 LEU LEU E . n B 2 105 PRO 105 154 154 PRO PRO E . n B 2 106 GLY 106 155 155 GLY GLY E . n B 2 107 GLU 107 156 156 GLU GLU E . n B 2 108 ALA 108 157 157 ALA ALA E . n B 2 109 GLN 109 158 158 GLN GLN E . n B 2 110 LYS 110 159 159 LYS LYS E . n B 2 111 ILE 111 160 160 ILE ILE E . n B 2 112 ASP 112 161 161 ASP ASP E . n B 2 113 ARG 113 162 162 ARG ARG E . n B 2 114 MET 114 163 163 MET MET E . n B 2 115 MET 115 164 164 MET MET E . n B 2 116 GLU 116 165 165 GLU GLU E . n B 2 117 ALA 117 166 166 ALA ALA E . n B 2 118 PHE 118 167 167 PHE PHE E . n B 2 119 ALA 119 168 168 ALA ALA E . n B 2 120 GLN 120 169 169 GLN GLN E . n B 2 121 ARG 121 170 170 ARG ARG E . n B 2 122 TYR 122 171 171 TYR TYR E . n B 2 123 CYS 123 172 172 CYS CYS E . n B 2 124 LEU 124 173 173 LEU LEU E . n B 2 125 CME 125 174 174 CME CME E . n B 2 126 ASN 126 175 175 ASN ASN E . n B 2 127 PRO 127 176 176 PRO PRO E . n B 2 128 GLY 128 177 177 GLY GLY E . n B 2 129 VAL 129 178 178 VAL VAL E . n B 2 130 PHE 130 179 179 PHE PHE E . n B 2 131 GLN 131 180 180 GLN GLN E . n B 2 132 SER 132 181 181 SER SER E . n B 2 133 THR 133 182 182 THR THR E . n B 2 134 ASP 134 183 183 ASP ASP E . n B 2 135 THR 135 184 184 THR THR E . n B 2 136 CYS 136 185 185 CYS CYS E . n B 2 137 TYR 137 186 186 TYR TYR E . n B 2 138 VAL 138 187 187 VAL VAL E . n B 2 139 LEU 139 188 188 LEU LEU E . n B 2 140 SER 140 189 189 SER SER E . n B 2 141 TYR 141 190 190 TYR TYR E . n B 2 142 SER 142 191 191 SER SER E . n B 2 143 VAL 143 192 192 VAL VAL E . n B 2 144 ILE 144 193 193 ILE ILE E . n B 2 145 MET 145 194 194 MET MET E . n B 2 146 LEU 146 195 195 LEU LEU E . n B 2 147 ASN 147 196 196 ASN ASN E . n B 2 148 THR 148 197 197 THR THR E . n B 2 149 ASP 149 198 198 ASP ASP E . n B 2 150 LEU 150 199 199 LEU LEU E . n B 2 151 HIS 151 200 200 HIS HIS E . n B 2 152 ASN 152 201 201 ASN ASN E . n B 2 153 PRO 153 202 202 PRO PRO E . n B 2 154 ASN 154 203 203 ASN ASN E . n B 2 155 VAL 155 204 204 VAL VAL E . n B 2 156 ARG 156 205 205 ARG ARG E . n B 2 157 ASP 157 206 206 ASP ASP E . n B 2 158 LYS 158 207 207 LYS LYS E . n B 2 159 MET 159 208 208 MET MET E . n B 2 160 GLY 160 209 209 GLY GLY E . n B 2 161 LEU 161 210 210 LEU LEU E . n B 2 162 GLU 162 211 211 GLU GLU E . n B 2 163 ARG 163 212 212 ARG ARG E . n B 2 164 PHE 164 213 213 PHE PHE E . n B 2 165 VAL 165 214 214 VAL VAL E . n B 2 166 ALA 166 215 215 ALA ALA E . n B 2 167 MET 167 216 216 MET MET E . n B 2 168 ASN 168 217 217 ASN ASN E . n B 2 169 ARG 169 218 218 ARG ARG E . n B 2 170 GLY 170 219 219 GLY GLY E . n B 2 171 ILE 171 220 220 ILE ILE E . n B 2 172 ASN 172 221 221 ASN ASN E . n B 2 173 GLU 173 222 222 GLU GLU E . n B 2 174 GLY 174 223 223 GLY GLY E . n B 2 175 GLY 175 224 224 GLY GLY E . n B 2 176 ASP 176 225 225 ASP ASP E . n B 2 177 LEU 177 226 226 LEU LEU E . n B 2 178 PRO 178 227 227 PRO PRO E . n B 2 179 GLU 179 228 228 GLU GLU E . n B 2 180 GLU 180 229 229 GLU GLU E . n B 2 181 LEU 181 230 230 LEU LEU E . n B 2 182 LEU 182 231 231 LEU LEU E . n B 2 183 ARG 183 232 232 ARG ARG E . n B 2 184 ASN 184 233 233 ASN ASN E . n B 2 185 LEU 185 234 234 LEU LEU E . n B 2 186 TYR 186 235 235 TYR TYR E . n B 2 187 ASP 187 236 236 ASP ASP E . n B 2 188 SER 188 237 237 SER SER E . n B 2 189 ILE 189 238 238 ILE ILE E . n B 2 190 ARG 190 239 239 ARG ARG E . n B 2 191 ASN 191 240 240 ASN ASN E . n B 2 192 GLU 192 241 241 GLU GLU E . n B 2 193 PRO 193 242 242 PRO PRO E . n B 2 194 PHE 194 243 243 PHE PHE E . n B 2 195 LYS 195 244 244 LYS LYS E . n B 2 196 ILE 196 245 245 ILE ILE E . n B 2 197 PRO 197 246 246 PRO PRO E . n B 2 198 GLU 198 247 247 GLU GLU E . n B 2 199 ASP 199 248 248 ASP ASP E . n B 2 200 ASP 200 249 249 ASP ASP E . n B 2 201 GLY 201 250 ? ? ? E . n B 2 202 ASN 202 251 ? ? ? E . n B 2 203 ASP 203 252 ? ? ? E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 402 402 MG MG A . D 4 GDP 1 401 401 GDP GDP A . E 5 AFB 1 403 403 AFB AFB A . F 6 HOH 1 404 2 HOH HOH A . F 6 HOH 2 405 3 HOH HOH A . F 6 HOH 3 406 5 HOH HOH A . F 6 HOH 4 407 6 HOH HOH A . F 6 HOH 5 408 7 HOH HOH A . F 6 HOH 6 409 9 HOH HOH A . F 6 HOH 7 410 10 HOH HOH A . F 6 HOH 8 411 12 HOH HOH A . F 6 HOH 9 412 14 HOH HOH A . F 6 HOH 10 413 15 HOH HOH A . F 6 HOH 11 414 17 HOH HOH A . F 6 HOH 12 415 19 HOH HOH A . F 6 HOH 13 416 21 HOH HOH A . F 6 HOH 14 417 23 HOH HOH A . F 6 HOH 15 418 24 HOH HOH A . F 6 HOH 16 419 25 HOH HOH A . F 6 HOH 17 420 26 HOH HOH A . F 6 HOH 18 421 27 HOH HOH A . F 6 HOH 19 422 31 HOH HOH A . F 6 HOH 20 423 32 HOH HOH A . F 6 HOH 21 424 33 HOH HOH A . F 6 HOH 22 425 35 HOH HOH A . F 6 HOH 23 426 36 HOH HOH A . F 6 HOH 24 427 37 HOH HOH A . F 6 HOH 25 428 40 HOH HOH A . F 6 HOH 26 429 45 HOH HOH A . F 6 HOH 27 430 46 HOH HOH A . F 6 HOH 28 431 47 HOH HOH A . F 6 HOH 29 432 49 HOH HOH A . F 6 HOH 30 433 51 HOH HOH A . F 6 HOH 31 434 52 HOH HOH A . F 6 HOH 32 435 63 HOH HOH A . F 6 HOH 33 436 64 HOH HOH A . F 6 HOH 34 437 66 HOH HOH A . F 6 HOH 35 438 69 HOH HOH A . F 6 HOH 36 439 71 HOH HOH A . F 6 HOH 37 440 72 HOH HOH A . F 6 HOH 38 441 73 HOH HOH A . F 6 HOH 39 442 74 HOH HOH A . F 6 HOH 40 443 79 HOH HOH A . F 6 HOH 41 444 80 HOH HOH A . F 6 HOH 42 445 81 HOH HOH A . F 6 HOH 43 446 82 HOH HOH A . F 6 HOH 44 447 83 HOH HOH A . F 6 HOH 45 448 85 HOH HOH A . F 6 HOH 46 449 87 HOH HOH A . F 6 HOH 47 450 92 HOH HOH A . F 6 HOH 48 451 93 HOH HOH A . F 6 HOH 49 452 94 HOH HOH A . F 6 HOH 50 453 95 HOH HOH A . F 6 HOH 51 454 98 HOH HOH A . F 6 HOH 52 455 102 HOH HOH A . F 6 HOH 53 456 104 HOH HOH A . F 6 HOH 54 457 105 HOH HOH A . F 6 HOH 55 458 106 HOH HOH A . F 6 HOH 56 459 108 HOH HOH A . F 6 HOH 57 460 112 HOH HOH A . F 6 HOH 58 461 114 HOH HOH A . F 6 HOH 59 462 117 HOH HOH A . F 6 HOH 60 463 118 HOH HOH A . F 6 HOH 61 464 119 HOH HOH A . F 6 HOH 62 465 121 HOH HOH A . F 6 HOH 63 466 122 HOH HOH A . F 6 HOH 64 467 124 HOH HOH A . F 6 HOH 65 468 125 HOH HOH A . F 6 HOH 66 469 126 HOH HOH A . F 6 HOH 67 470 127 HOH HOH A . F 6 HOH 68 471 128 HOH HOH A . F 6 HOH 69 472 130 HOH HOH A . F 6 HOH 70 473 132 HOH HOH A . F 6 HOH 71 474 133 HOH HOH A . F 6 HOH 72 475 134 HOH HOH A . F 6 HOH 73 476 140 HOH HOH A . F 6 HOH 74 477 141 HOH HOH A . F 6 HOH 75 478 143 HOH HOH A . F 6 HOH 76 479 144 HOH HOH A . F 6 HOH 77 480 146 HOH HOH A . F 6 HOH 78 481 147 HOH HOH A . F 6 HOH 79 482 149 HOH HOH A . F 6 HOH 80 483 152 HOH HOH A . F 6 HOH 81 484 156 HOH HOH A . F 6 HOH 82 485 157 HOH HOH A . F 6 HOH 83 486 160 HOH HOH A . F 6 HOH 84 487 163 HOH HOH A . F 6 HOH 85 488 165 HOH HOH A . F 6 HOH 86 489 166 HOH HOH A . F 6 HOH 87 490 167 HOH HOH A . F 6 HOH 88 491 168 HOH HOH A . F 6 HOH 89 492 169 HOH HOH A . F 6 HOH 90 493 170 HOH HOH A . F 6 HOH 91 494 171 HOH HOH A . F 6 HOH 92 495 173 HOH HOH A . F 6 HOH 93 496 174 HOH HOH A . F 6 HOH 94 497 175 HOH HOH A . F 6 HOH 95 498 176 HOH HOH A . F 6 HOH 96 499 177 HOH HOH A . F 6 HOH 97 500 178 HOH HOH A . F 6 HOH 98 501 182 HOH HOH A . F 6 HOH 99 502 186 HOH HOH A . F 6 HOH 100 503 190 HOH HOH A . F 6 HOH 101 504 191 HOH HOH A . F 6 HOH 102 505 192 HOH HOH A . F 6 HOH 103 506 194 HOH HOH A . F 6 HOH 104 507 195 HOH HOH A . F 6 HOH 105 508 196 HOH HOH A . F 6 HOH 106 509 199 HOH HOH A . F 6 HOH 107 510 201 HOH HOH A . F 6 HOH 108 511 203 HOH HOH A . F 6 HOH 109 512 207 HOH HOH A . F 6 HOH 110 513 208 HOH HOH A . F 6 HOH 111 514 210 HOH HOH A . F 6 HOH 112 515 212 HOH HOH A . F 6 HOH 113 516 214 HOH HOH A . F 6 HOH 114 517 217 HOH HOH A . F 6 HOH 115 518 218 HOH HOH A . F 6 HOH 116 519 219 HOH HOH A . F 6 HOH 117 520 220 HOH HOH A . F 6 HOH 118 521 226 HOH HOH A . F 6 HOH 119 522 230 HOH HOH A . F 6 HOH 120 523 231 HOH HOH A . F 6 HOH 121 524 235 HOH HOH A . F 6 HOH 122 525 237 HOH HOH A . F 6 HOH 123 526 241 HOH HOH A . F 6 HOH 124 527 242 HOH HOH A . F 6 HOH 125 528 246 HOH HOH A . F 6 HOH 126 529 251 HOH HOH A . F 6 HOH 127 530 252 HOH HOH A . F 6 HOH 128 531 253 HOH HOH A . F 6 HOH 129 532 255 HOH HOH A . F 6 HOH 130 533 256 HOH HOH A . F 6 HOH 131 534 259 HOH HOH A . F 6 HOH 132 535 261 HOH HOH A . F 6 HOH 133 536 262 HOH HOH A . F 6 HOH 134 537 265 HOH HOH A . F 6 HOH 135 538 269 HOH HOH A . F 6 HOH 136 539 271 HOH HOH A . F 6 HOH 137 540 274 HOH HOH A . F 6 HOH 138 541 276 HOH HOH A . F 6 HOH 139 542 277 HOH HOH A . F 6 HOH 140 543 278 HOH HOH A . F 6 HOH 141 544 279 HOH HOH A . F 6 HOH 142 545 280 HOH HOH A . F 6 HOH 143 546 281 HOH HOH A . G 6 HOH 1 253 1 HOH HOH E . G 6 HOH 2 254 4 HOH HOH E . G 6 HOH 3 255 8 HOH HOH E . G 6 HOH 4 256 11 HOH HOH E . G 6 HOH 5 257 13 HOH HOH E . G 6 HOH 6 258 16 HOH HOH E . G 6 HOH 7 259 18 HOH HOH E . G 6 HOH 8 260 20 HOH HOH E . G 6 HOH 9 261 22 HOH HOH E . G 6 HOH 10 262 28 HOH HOH E . G 6 HOH 11 263 29 HOH HOH E . G 6 HOH 12 264 30 HOH HOH E . G 6 HOH 13 265 34 HOH HOH E . G 6 HOH 14 266 38 HOH HOH E . G 6 HOH 15 267 39 HOH HOH E . G 6 HOH 16 268 41 HOH HOH E . G 6 HOH 17 269 42 HOH HOH E . G 6 HOH 18 270 43 HOH HOH E . G 6 HOH 19 271 44 HOH HOH E . G 6 HOH 20 272 48 HOH HOH E . G 6 HOH 21 273 50 HOH HOH E . G 6 HOH 22 274 53 HOH HOH E . G 6 HOH 23 275 54 HOH HOH E . G 6 HOH 24 276 55 HOH HOH E . G 6 HOH 25 277 56 HOH HOH E . G 6 HOH 26 278 57 HOH HOH E . G 6 HOH 27 279 58 HOH HOH E . G 6 HOH 28 280 59 HOH HOH E . G 6 HOH 29 281 60 HOH HOH E . G 6 HOH 30 282 61 HOH HOH E . G 6 HOH 31 283 62 HOH HOH E . G 6 HOH 32 284 65 HOH HOH E . G 6 HOH 33 285 67 HOH HOH E . G 6 HOH 34 286 68 HOH HOH E . G 6 HOH 35 287 70 HOH HOH E . G 6 HOH 36 288 75 HOH HOH E . G 6 HOH 37 289 76 HOH HOH E . G 6 HOH 38 290 77 HOH HOH E . G 6 HOH 39 291 78 HOH HOH E . G 6 HOH 40 292 84 HOH HOH E . G 6 HOH 41 293 86 HOH HOH E . G 6 HOH 42 294 88 HOH HOH E . G 6 HOH 43 295 89 HOH HOH E . G 6 HOH 44 296 90 HOH HOH E . G 6 HOH 45 297 91 HOH HOH E . G 6 HOH 46 298 96 HOH HOH E . G 6 HOH 47 299 97 HOH HOH E . G 6 HOH 48 300 99 HOH HOH E . G 6 HOH 49 301 100 HOH HOH E . G 6 HOH 50 302 101 HOH HOH E . G 6 HOH 51 303 103 HOH HOH E . G 6 HOH 52 304 107 HOH HOH E . G 6 HOH 53 305 109 HOH HOH E . G 6 HOH 54 306 110 HOH HOH E . G 6 HOH 55 307 111 HOH HOH E . G 6 HOH 56 308 113 HOH HOH E . G 6 HOH 57 309 115 HOH HOH E . G 6 HOH 58 310 116 HOH HOH E . G 6 HOH 59 311 120 HOH HOH E . G 6 HOH 60 312 123 HOH HOH E . G 6 HOH 61 313 129 HOH HOH E . G 6 HOH 62 314 131 HOH HOH E . G 6 HOH 63 315 135 HOH HOH E . G 6 HOH 64 316 136 HOH HOH E . G 6 HOH 65 317 137 HOH HOH E . G 6 HOH 66 318 138 HOH HOH E . G 6 HOH 67 319 139 HOH HOH E . G 6 HOH 68 320 142 HOH HOH E . G 6 HOH 69 321 145 HOH HOH E . G 6 HOH 70 322 148 HOH HOH E . G 6 HOH 71 323 150 HOH HOH E . G 6 HOH 72 324 151 HOH HOH E . G 6 HOH 73 325 153 HOH HOH E . G 6 HOH 74 326 154 HOH HOH E . G 6 HOH 75 327 155 HOH HOH E . G 6 HOH 76 328 158 HOH HOH E . G 6 HOH 77 329 159 HOH HOH E . G 6 HOH 78 330 161 HOH HOH E . G 6 HOH 79 331 162 HOH HOH E . G 6 HOH 80 332 164 HOH HOH E . G 6 HOH 81 333 172 HOH HOH E . G 6 HOH 82 334 179 HOH HOH E . G 6 HOH 83 335 180 HOH HOH E . G 6 HOH 84 336 181 HOH HOH E . G 6 HOH 85 337 183 HOH HOH E . G 6 HOH 86 338 184 HOH HOH E . G 6 HOH 87 339 185 HOH HOH E . G 6 HOH 88 340 187 HOH HOH E . G 6 HOH 89 341 188 HOH HOH E . G 6 HOH 90 342 189 HOH HOH E . G 6 HOH 91 343 193 HOH HOH E . G 6 HOH 92 344 197 HOH HOH E . G 6 HOH 93 345 198 HOH HOH E . G 6 HOH 94 346 200 HOH HOH E . G 6 HOH 95 347 202 HOH HOH E . G 6 HOH 96 348 204 HOH HOH E . G 6 HOH 97 349 205 HOH HOH E . G 6 HOH 98 350 206 HOH HOH E . G 6 HOH 99 351 209 HOH HOH E . G 6 HOH 100 352 211 HOH HOH E . G 6 HOH 101 353 213 HOH HOH E . G 6 HOH 102 354 215 HOH HOH E . G 6 HOH 103 355 216 HOH HOH E . G 6 HOH 104 356 221 HOH HOH E . G 6 HOH 105 357 222 HOH HOH E . G 6 HOH 106 358 223 HOH HOH E . G 6 HOH 107 359 224 HOH HOH E . G 6 HOH 108 360 225 HOH HOH E . G 6 HOH 109 361 227 HOH HOH E . G 6 HOH 110 362 228 HOH HOH E . G 6 HOH 111 363 229 HOH HOH E . G 6 HOH 112 364 232 HOH HOH E . G 6 HOH 113 365 233 HOH HOH E . G 6 HOH 114 366 234 HOH HOH E . G 6 HOH 115 367 236 HOH HOH E . G 6 HOH 116 368 238 HOH HOH E . G 6 HOH 117 369 239 HOH HOH E . G 6 HOH 118 370 240 HOH HOH E . G 6 HOH 119 371 243 HOH HOH E . G 6 HOH 120 372 244 HOH HOH E . G 6 HOH 121 373 245 HOH HOH E . G 6 HOH 122 374 247 HOH HOH E . G 6 HOH 123 375 248 HOH HOH E . G 6 HOH 124 376 249 HOH HOH E . G 6 HOH 125 377 250 HOH HOH E . G 6 HOH 126 378 254 HOH HOH E . G 6 HOH 127 379 257 HOH HOH E . G 6 HOH 128 380 258 HOH HOH E . G 6 HOH 129 381 260 HOH HOH E . G 6 HOH 130 382 263 HOH HOH E . G 6 HOH 131 383 264 HOH HOH E . G 6 HOH 132 384 266 HOH HOH E . G 6 HOH 133 385 267 HOH HOH E . G 6 HOH 134 386 268 HOH HOH E . G 6 HOH 135 387 270 HOH HOH E . G 6 HOH 136 388 272 HOH HOH E . G 6 HOH 137 389 273 HOH HOH E . G 6 HOH 138 390 275 HOH HOH E . G 6 HOH 139 391 282 HOH HOH E . G 6 HOH 140 392 283 HOH HOH E . G 6 HOH 141 393 284 HOH HOH E . G 6 HOH 142 394 285 HOH HOH E . G 6 HOH 143 395 286 HOH HOH E . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id CME _pdbx_struct_mod_residue.label_seq_id 125 _pdbx_struct_mod_residue.auth_asym_id E _pdbx_struct_mod_residue.auth_comp_id CME _pdbx_struct_mod_residue.auth_seq_id 174 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'S,S-(2-HYDROXYETHYL)THIOCYSTEINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4250 ? 1 MORE -27 ? 1 'SSA (A^2)' 16660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 E HOH 393 ? G HOH . 2 1 E HOH 395 ? G HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 14 ? A THR 31 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O1B ? D GDP . ? A GDP 401 ? 1_555 90.7 ? 2 OG1 ? A THR 14 ? A THR 31 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 419 ? 1_555 173.9 ? 3 O1B ? D GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 419 ? 1_555 95.4 ? 4 OG1 ? A THR 14 ? A THR 31 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 432 ? 1_555 88.2 ? 5 O1B ? D GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 432 ? 1_555 98.4 ? 6 O ? F HOH . ? A HOH 419 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 432 ? 1_555 90.4 ? 7 OG1 ? A THR 14 ? A THR 31 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 458 ? 1_555 90.0 ? 8 O1B ? D GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 458 ? 1_555 89.3 ? 9 O ? F HOH . ? A HOH 419 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 458 ? 1_555 90.6 ? 10 O ? F HOH . ? A HOH 432 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 458 ? 1_555 172.0 ? 11 OG1 ? A THR 14 ? A THR 31 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 544 ? 1_555 86.3 ? 12 O1B ? D GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 544 ? 1_555 172.8 ? 13 O ? F HOH . ? A HOH 419 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 544 ? 1_555 87.7 ? 14 O ? F HOH . ? A HOH 432 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 544 ? 1_555 88.0 ? 15 O ? F HOH . ? A HOH 458 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 544 ? 1_555 84.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-02-10 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2021-10-27 6 'Structure model' 1 5 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' pdbx_struct_special_symmetry 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_conn_type 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.value' 18 5 'Structure model' '_struct_conn.conn_type_id' 19 5 'Structure model' '_struct_conn.id' 20 5 'Structure model' '_struct_conn.pdbx_dist_value' 21 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 5 'Structure model' '_struct_conn_type.id' 37 5 'Structure model' '_struct_ref_seq_dif.details' 38 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 39.7581 16.4036 32.9009 0.1086 0.0892 0.1244 0.0016 -0.0001 0.0196 2.4826 1.1361 1.0024 0.2967 0.0892 -0.3112 -0.1139 0.0873 0.1898 0.0578 -0.0812 -0.1553 -0.0553 0.0467 0.1951 'X-RAY DIFFRACTION' 2 ? refined 22.9252 -5.5566 23.5297 0.1718 0.1708 0.0873 -0.0172 0.0124 -0.0745 0.9489 2.2842 1.1349 -0.3036 0.1546 0.4855 0.0774 0.1902 -0.1816 -0.1310 0.0320 -0.0772 0.2113 0.0849 -0.1094 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 18 A 161 178 ? A A 'X-RAY DIFFRACTION' ? 2 1 D 1 401 C 1 402 ? A A 'X-RAY DIFFRACTION' ? 3 2 B 8 57 B 200 249 ? E E 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 MAR345 'data collection' . ? 2 XDS 'data scaling' . ? 3 CCP4 phasing '(MOLREP)' ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE ENGINEERED MUTATIONS IN THE ARNO STRUCTURE (F190Y, A191S, S198D, P208M) ARE BREFELDIN A- SENSITIZING MUTATIONS. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 38 ? ? O A HOH 404 ? ? 1.93 2 1 OD1 A ASN 101 ? ? O A HOH 435 ? ? 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 SD A MET 22 ? ? CE A MET 22 ? ? 1.329 1.774 -0.445 0.056 N 2 1 CD A GLU 106 ? ? OE1 A GLU 106 ? ? 1.337 1.252 0.085 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 129 ? ? CG A ASP 129 ? ? OD2 A ASP 129 ? ? 124.24 118.30 5.94 0.90 N 2 1 NE E ARG 69 ? ? CZ E ARG 69 ? ? NH2 E ARG 69 ? ? 117.16 120.30 -3.14 0.50 N 3 1 NE E ARG 152 ? ? CZ E ARG 152 ? ? NH2 E ARG 152 ? ? 116.79 120.30 -3.51 0.50 N 4 1 NE E ARG 162 ? ? CZ E ARG 162 ? ? NH1 E ARG 162 ? ? 124.84 120.30 4.54 0.50 N 5 1 NE E ARG 162 ? ? CZ E ARG 162 ? ? NH2 E ARG 162 ? ? 114.39 120.30 -5.91 0.50 N 6 1 CB E ASP 206 ? ? CG E ASP 206 ? ? OD2 E ASP 206 ? ? 125.30 118.30 7.00 0.90 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 39 ? A LEU 22 2 1 Y 1 A GLY 40 ? A GLY 23 3 1 Y 1 A GLU 41 ? A GLU 24 4 1 Y 1 A ILE 42 ? A ILE 25 5 1 Y 1 A VAL 43 ? A VAL 26 6 1 Y 1 A THR 44 ? A THR 27 7 1 Y 1 A ASN 179 ? A ASN 162 8 1 Y 1 A GLN 180 ? A GLN 163 9 1 Y 1 A LYS 181 ? A LYS 164 10 1 Y 1 E LEU 50 ? B LEU 1 11 1 Y 1 E GLU 51 ? B GLU 2 12 1 Y 1 E ALA 52 ? B ALA 3 13 1 Y 1 E ASN 53 ? B ASN 4 14 1 Y 1 E GLU 54 ? B GLU 5 15 1 Y 1 E GLY 55 ? B GLY 6 16 1 Y 1 E SER 56 ? B SER 7 17 1 Y 1 E GLY 250 ? B GLY 201 18 1 Y 1 E ASN 251 ? B ASN 202 19 1 Y 1 E ASP 252 ? B ASP 203 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AFB OC7 O N N 1 AFB C7 C N S 2 AFB C8 C N N 3 AFB C6 C N N 4 AFB C5 C N R 5 AFB C9 C N S 6 AFB C10 C N N 7 AFB C11 C N N 8 AFB C12 C N N 9 AFB C13 C N N 10 AFB C14 C N N 11 AFB C15 C N S 12 AFB C16 C N N 13 AFB O16 O N N 14 AFB C1 C N N 15 AFB OC1 O N N 16 AFB C2 C N N 17 AFB C3 C N N 18 AFB C4 C N R 19 AFB OC4 O N N 20 AFB HO7 H N N 21 AFB HC7 H N N 22 AFB H81 H N N 23 AFB H82 H N N 24 AFB H61 H N N 25 AFB H62 H N N 26 AFB H5 H N N 27 AFB H9 H N N 28 AFB H101 H N N 29 AFB H111 H N N 30 AFB H121 H N N 31 AFB H122 H N N 32 AFB H131 H N N 33 AFB H132 H N N 34 AFB H141 H N N 35 AFB H142 H N N 36 AFB H15 H N N 37 AFB H161 H N N 38 AFB H162 H N N 39 AFB H163 H N N 40 AFB H21 H N N 41 AFB H31 H N N 42 AFB HC4 H N N 43 AFB HO4 H N N 44 ALA N N N N 45 ALA CA C N S 46 ALA C C N N 47 ALA O O N N 48 ALA CB C N N 49 ALA OXT O N N 50 ALA H H N N 51 ALA H2 H N N 52 ALA HA H N N 53 ALA HB1 H N N 54 ALA HB2 H N N 55 ALA HB3 H N N 56 ALA HXT H N N 57 ARG N N N N 58 ARG CA C N S 59 ARG C C N N 60 ARG O O N N 61 ARG CB C N N 62 ARG CG C N N 63 ARG CD C N N 64 ARG NE N N N 65 ARG CZ C N N 66 ARG NH1 N N N 67 ARG NH2 N N N 68 ARG OXT O N N 69 ARG H H N N 70 ARG H2 H N N 71 ARG HA H N N 72 ARG HB2 H N N 73 ARG HB3 H N N 74 ARG HG2 H N N 75 ARG HG3 H N N 76 ARG HD2 H N N 77 ARG HD3 H N N 78 ARG HE H N N 79 ARG HH11 H N N 80 ARG HH12 H N N 81 ARG HH21 H N N 82 ARG HH22 H N N 83 ARG HXT H N N 84 ASN N N N N 85 ASN CA C N S 86 ASN C C N N 87 ASN O O N N 88 ASN CB C N N 89 ASN CG C N N 90 ASN OD1 O N N 91 ASN ND2 N N N 92 ASN OXT O N N 93 ASN H H N N 94 ASN H2 H N N 95 ASN HA H N N 96 ASN HB2 H N N 97 ASN HB3 H N N 98 ASN HD21 H N N 99 ASN HD22 H N N 100 ASN HXT H N N 101 ASP N N N N 102 ASP CA C N S 103 ASP C C N N 104 ASP O O N N 105 ASP CB C N N 106 ASP CG C N N 107 ASP OD1 O N N 108 ASP OD2 O N N 109 ASP OXT O N N 110 ASP H H N N 111 ASP H2 H N N 112 ASP HA H N N 113 ASP HB2 H N N 114 ASP HB3 H N N 115 ASP HD2 H N N 116 ASP HXT H N N 117 CME N N N N 118 CME CA C N R 119 CME CB C N N 120 CME SG S N N 121 CME SD S N N 122 CME CE C N N 123 CME CZ C N N 124 CME OH O N N 125 CME C C N N 126 CME O O N N 127 CME OXT O N N 128 CME H H N N 129 CME H2 H N N 130 CME HA H N N 131 CME HB2 H N N 132 CME HB3 H N N 133 CME HE2 H N N 134 CME HE3 H N N 135 CME HZ2 H N N 136 CME HZ3 H N N 137 CME HH H N N 138 CME HXT H N N 139 CYS N N N N 140 CYS CA C N R 141 CYS C C N N 142 CYS O O N N 143 CYS CB C N N 144 CYS SG S N N 145 CYS OXT O N N 146 CYS H H N N 147 CYS H2 H N N 148 CYS HA H N N 149 CYS HB2 H N N 150 CYS HB3 H N N 151 CYS HG H N N 152 CYS HXT H N N 153 GDP PB P N N 154 GDP O1B O N N 155 GDP O2B O N N 156 GDP O3B O N N 157 GDP O3A O N N 158 GDP PA P N N 159 GDP O1A O N N 160 GDP O2A O N N 161 GDP "O5'" O N N 162 GDP "C5'" C N N 163 GDP "C4'" C N R 164 GDP "O4'" O N N 165 GDP "C3'" C N S 166 GDP "O3'" O N N 167 GDP "C2'" C N R 168 GDP "O2'" O N N 169 GDP "C1'" C N R 170 GDP N9 N Y N 171 GDP C8 C Y N 172 GDP N7 N Y N 173 GDP C5 C Y N 174 GDP C6 C N N 175 GDP O6 O N N 176 GDP N1 N N N 177 GDP C2 C N N 178 GDP N2 N N N 179 GDP N3 N N N 180 GDP C4 C Y N 181 GDP HOB2 H N N 182 GDP HOB3 H N N 183 GDP HOA2 H N N 184 GDP "H5'" H N N 185 GDP "H5''" H N N 186 GDP "H4'" H N N 187 GDP "H3'" H N N 188 GDP "HO3'" H N N 189 GDP "H2'" H N N 190 GDP "HO2'" H N N 191 GDP "H1'" H N N 192 GDP H8 H N N 193 GDP HN1 H N N 194 GDP HN21 H N N 195 GDP HN22 H N N 196 GLN N N N N 197 GLN CA C N S 198 GLN C C N N 199 GLN O O N N 200 GLN CB C N N 201 GLN CG C N N 202 GLN CD C N N 203 GLN OE1 O N N 204 GLN NE2 N N N 205 GLN OXT O N N 206 GLN H H N N 207 GLN H2 H N N 208 GLN HA H N N 209 GLN HB2 H N N 210 GLN HB3 H N N 211 GLN HG2 H N N 212 GLN HG3 H N N 213 GLN HE21 H N N 214 GLN HE22 H N N 215 GLN HXT H N N 216 GLU N N N N 217 GLU CA C N S 218 GLU C C N N 219 GLU O O N N 220 GLU CB C N N 221 GLU CG C N N 222 GLU CD C N N 223 GLU OE1 O N N 224 GLU OE2 O N N 225 GLU OXT O N N 226 GLU H H N N 227 GLU H2 H N N 228 GLU HA H N N 229 GLU HB2 H N N 230 GLU HB3 H N N 231 GLU HG2 H N N 232 GLU HG3 H N N 233 GLU HE2 H N N 234 GLU HXT H N N 235 GLY N N N N 236 GLY CA C N N 237 GLY C C N N 238 GLY O O N N 239 GLY OXT O N N 240 GLY H H N N 241 GLY H2 H N N 242 GLY HA2 H N N 243 GLY HA3 H N N 244 GLY HXT H N N 245 HIS N N N N 246 HIS CA C N S 247 HIS C C N N 248 HIS O O N N 249 HIS CB C N N 250 HIS CG C Y N 251 HIS ND1 N Y N 252 HIS CD2 C Y N 253 HIS CE1 C Y N 254 HIS NE2 N Y N 255 HIS OXT O N N 256 HIS H H N N 257 HIS H2 H N N 258 HIS HA H N N 259 HIS HB2 H N N 260 HIS HB3 H N N 261 HIS HD1 H N N 262 HIS HD2 H N N 263 HIS HE1 H N N 264 HIS HE2 H N N 265 HIS HXT H N N 266 HOH O O N N 267 HOH H1 H N N 268 HOH H2 H N N 269 ILE N N N N 270 ILE CA C N S 271 ILE C C N N 272 ILE O O N N 273 ILE CB C N S 274 ILE CG1 C N N 275 ILE CG2 C N N 276 ILE CD1 C N N 277 ILE OXT O N N 278 ILE H H N N 279 ILE H2 H N N 280 ILE HA H N N 281 ILE HB H N N 282 ILE HG12 H N N 283 ILE HG13 H N N 284 ILE HG21 H N N 285 ILE HG22 H N N 286 ILE HG23 H N N 287 ILE HD11 H N N 288 ILE HD12 H N N 289 ILE HD13 H N N 290 ILE HXT H N N 291 LEU N N N N 292 LEU CA C N S 293 LEU C C N N 294 LEU O O N N 295 LEU CB C N N 296 LEU CG C N N 297 LEU CD1 C N N 298 LEU CD2 C N N 299 LEU OXT O N N 300 LEU H H N N 301 LEU H2 H N N 302 LEU HA H N N 303 LEU HB2 H N N 304 LEU HB3 H N N 305 LEU HG H N N 306 LEU HD11 H N N 307 LEU HD12 H N N 308 LEU HD13 H N N 309 LEU HD21 H N N 310 LEU HD22 H N N 311 LEU HD23 H N N 312 LEU HXT H N N 313 LYS N N N N 314 LYS CA C N S 315 LYS C C N N 316 LYS O O N N 317 LYS CB C N N 318 LYS CG C N N 319 LYS CD C N N 320 LYS CE C N N 321 LYS NZ N N N 322 LYS OXT O N N 323 LYS H H N N 324 LYS H2 H N N 325 LYS HA H N N 326 LYS HB2 H N N 327 LYS HB3 H N N 328 LYS HG2 H N N 329 LYS HG3 H N N 330 LYS HD2 H N N 331 LYS HD3 H N N 332 LYS HE2 H N N 333 LYS HE3 H N N 334 LYS HZ1 H N N 335 LYS HZ2 H N N 336 LYS HZ3 H N N 337 LYS HXT H N N 338 MET N N N N 339 MET CA C N S 340 MET C C N N 341 MET O O N N 342 MET CB C N N 343 MET CG C N N 344 MET SD S N N 345 MET CE C N N 346 MET OXT O N N 347 MET H H N N 348 MET H2 H N N 349 MET HA H N N 350 MET HB2 H N N 351 MET HB3 H N N 352 MET HG2 H N N 353 MET HG3 H N N 354 MET HE1 H N N 355 MET HE2 H N N 356 MET HE3 H N N 357 MET HXT H N N 358 MG MG MG N N 359 PHE N N N N 360 PHE CA C N S 361 PHE C C N N 362 PHE O O N N 363 PHE CB C N N 364 PHE CG C Y N 365 PHE CD1 C Y N 366 PHE CD2 C Y N 367 PHE CE1 C Y N 368 PHE CE2 C Y N 369 PHE CZ C Y N 370 PHE OXT O N N 371 PHE H H N N 372 PHE H2 H N N 373 PHE HA H N N 374 PHE HB2 H N N 375 PHE HB3 H N N 376 PHE HD1 H N N 377 PHE HD2 H N N 378 PHE HE1 H N N 379 PHE HE2 H N N 380 PHE HZ H N N 381 PHE HXT H N N 382 PRO N N N N 383 PRO CA C N S 384 PRO C C N N 385 PRO O O N N 386 PRO CB C N N 387 PRO CG C N N 388 PRO CD C N N 389 PRO OXT O N N 390 PRO H H N N 391 PRO HA H N N 392 PRO HB2 H N N 393 PRO HB3 H N N 394 PRO HG2 H N N 395 PRO HG3 H N N 396 PRO HD2 H N N 397 PRO HD3 H N N 398 PRO HXT H N N 399 SER N N N N 400 SER CA C N S 401 SER C C N N 402 SER O O N N 403 SER CB C N N 404 SER OG O N N 405 SER OXT O N N 406 SER H H N N 407 SER H2 H N N 408 SER HA H N N 409 SER HB2 H N N 410 SER HB3 H N N 411 SER HG H N N 412 SER HXT H N N 413 THR N N N N 414 THR CA C N S 415 THR C C N N 416 THR O O N N 417 THR CB C N R 418 THR OG1 O N N 419 THR CG2 C N N 420 THR OXT O N N 421 THR H H N N 422 THR H2 H N N 423 THR HA H N N 424 THR HB H N N 425 THR HG1 H N N 426 THR HG21 H N N 427 THR HG22 H N N 428 THR HG23 H N N 429 THR HXT H N N 430 TRP N N N N 431 TRP CA C N S 432 TRP C C N N 433 TRP O O N N 434 TRP CB C N N 435 TRP CG C Y N 436 TRP CD1 C Y N 437 TRP CD2 C Y N 438 TRP NE1 N Y N 439 TRP CE2 C Y N 440 TRP CE3 C Y N 441 TRP CZ2 C Y N 442 TRP CZ3 C Y N 443 TRP CH2 C Y N 444 TRP OXT O N N 445 TRP H H N N 446 TRP H2 H N N 447 TRP HA H N N 448 TRP HB2 H N N 449 TRP HB3 H N N 450 TRP HD1 H N N 451 TRP HE1 H N N 452 TRP HE3 H N N 453 TRP HZ2 H N N 454 TRP HZ3 H N N 455 TRP HH2 H N N 456 TRP HXT H N N 457 TYR N N N N 458 TYR CA C N S 459 TYR C C N N 460 TYR O O N N 461 TYR CB C N N 462 TYR CG C Y N 463 TYR CD1 C Y N 464 TYR CD2 C Y N 465 TYR CE1 C Y N 466 TYR CE2 C Y N 467 TYR CZ C Y N 468 TYR OH O N N 469 TYR OXT O N N 470 TYR H H N N 471 TYR H2 H N N 472 TYR HA H N N 473 TYR HB2 H N N 474 TYR HB3 H N N 475 TYR HD1 H N N 476 TYR HD2 H N N 477 TYR HE1 H N N 478 TYR HE2 H N N 479 TYR HH H N N 480 TYR HXT H N N 481 VAL N N N N 482 VAL CA C N S 483 VAL C C N N 484 VAL O O N N 485 VAL CB C N N 486 VAL CG1 C N N 487 VAL CG2 C N N 488 VAL OXT O N N 489 VAL H H N N 490 VAL H2 H N N 491 VAL HA H N N 492 VAL HB H N N 493 VAL HG11 H N N 494 VAL HG12 H N N 495 VAL HG13 H N N 496 VAL HG21 H N N 497 VAL HG22 H N N 498 VAL HG23 H N N 499 VAL HXT H N N 500 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AFB OC7 C7 sing N N 1 AFB OC7 HO7 sing N N 2 AFB C7 C8 sing N N 3 AFB C7 C6 sing N N 4 AFB C7 HC7 sing N N 5 AFB C8 C9 sing N N 6 AFB C8 H81 sing N N 7 AFB C8 H82 sing N N 8 AFB C6 C5 sing N N 9 AFB C6 H61 sing N N 10 AFB C6 H62 sing N N 11 AFB C5 C9 sing N N 12 AFB C5 C4 sing N N 13 AFB C5 H5 sing N N 14 AFB C9 C10 sing N N 15 AFB C9 H9 sing N N 16 AFB C10 C11 doub N E 17 AFB C10 H101 sing N N 18 AFB C11 C12 sing N N 19 AFB C11 H111 sing N N 20 AFB C12 C13 sing N N 21 AFB C12 H121 sing N N 22 AFB C12 H122 sing N N 23 AFB C13 C14 sing N N 24 AFB C13 H131 sing N N 25 AFB C13 H132 sing N N 26 AFB C14 C15 sing N N 27 AFB C14 H141 sing N N 28 AFB C14 H142 sing N N 29 AFB C15 C16 sing N N 30 AFB C15 O16 sing N N 31 AFB C15 H15 sing N N 32 AFB C16 H161 sing N N 33 AFB C16 H162 sing N N 34 AFB C16 H163 sing N N 35 AFB O16 C1 sing N N 36 AFB C1 OC1 doub N N 37 AFB C1 C2 sing N N 38 AFB C2 C3 doub N E 39 AFB C2 H21 sing N N 40 AFB C3 C4 sing N N 41 AFB C3 H31 sing N N 42 AFB C4 OC4 sing N N 43 AFB C4 HC4 sing N N 44 AFB OC4 HO4 sing N N 45 ALA N CA sing N N 46 ALA N H sing N N 47 ALA N H2 sing N N 48 ALA CA C sing N N 49 ALA CA CB sing N N 50 ALA CA HA sing N N 51 ALA C O doub N N 52 ALA C OXT sing N N 53 ALA CB HB1 sing N N 54 ALA CB HB2 sing N N 55 ALA CB HB3 sing N N 56 ALA OXT HXT sing N N 57 ARG N CA sing N N 58 ARG N H sing N N 59 ARG N H2 sing N N 60 ARG CA C sing N N 61 ARG CA CB sing N N 62 ARG CA HA sing N N 63 ARG C O doub N N 64 ARG C OXT sing N N 65 ARG CB CG sing N N 66 ARG CB HB2 sing N N 67 ARG CB HB3 sing N N 68 ARG CG CD sing N N 69 ARG CG HG2 sing N N 70 ARG CG HG3 sing N N 71 ARG CD NE sing N N 72 ARG CD HD2 sing N N 73 ARG CD HD3 sing N N 74 ARG NE CZ sing N N 75 ARG NE HE sing N N 76 ARG CZ NH1 sing N N 77 ARG CZ NH2 doub N N 78 ARG NH1 HH11 sing N N 79 ARG NH1 HH12 sing N N 80 ARG NH2 HH21 sing N N 81 ARG NH2 HH22 sing N N 82 ARG OXT HXT sing N N 83 ASN N CA sing N N 84 ASN N H sing N N 85 ASN N H2 sing N N 86 ASN CA C sing N N 87 ASN CA CB sing N N 88 ASN CA HA sing N N 89 ASN C O doub N N 90 ASN C OXT sing N N 91 ASN CB CG sing N N 92 ASN CB HB2 sing N N 93 ASN CB HB3 sing N N 94 ASN CG OD1 doub N N 95 ASN CG ND2 sing N N 96 ASN ND2 HD21 sing N N 97 ASN ND2 HD22 sing N N 98 ASN OXT HXT sing N N 99 ASP N CA sing N N 100 ASP N H sing N N 101 ASP N H2 sing N N 102 ASP CA C sing N N 103 ASP CA CB sing N N 104 ASP CA HA sing N N 105 ASP C O doub N N 106 ASP C OXT sing N N 107 ASP CB CG sing N N 108 ASP CB HB2 sing N N 109 ASP CB HB3 sing N N 110 ASP CG OD1 doub N N 111 ASP CG OD2 sing N N 112 ASP OD2 HD2 sing N N 113 ASP OXT HXT sing N N 114 CME N CA sing N N 115 CME N H sing N N 116 CME N H2 sing N N 117 CME CA CB sing N N 118 CME CA C sing N N 119 CME CA HA sing N N 120 CME CB SG sing N N 121 CME CB HB2 sing N N 122 CME CB HB3 sing N N 123 CME SG SD sing N N 124 CME SD CE sing N N 125 CME CE CZ sing N N 126 CME CE HE2 sing N N 127 CME CE HE3 sing N N 128 CME CZ OH sing N N 129 CME CZ HZ2 sing N N 130 CME CZ HZ3 sing N N 131 CME OH HH sing N N 132 CME C O doub N N 133 CME C OXT sing N N 134 CME OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 GDP PB O1B doub N N 149 GDP PB O2B sing N N 150 GDP PB O3B sing N N 151 GDP PB O3A sing N N 152 GDP O2B HOB2 sing N N 153 GDP O3B HOB3 sing N N 154 GDP O3A PA sing N N 155 GDP PA O1A doub N N 156 GDP PA O2A sing N N 157 GDP PA "O5'" sing N N 158 GDP O2A HOA2 sing N N 159 GDP "O5'" "C5'" sing N N 160 GDP "C5'" "C4'" sing N N 161 GDP "C5'" "H5'" sing N N 162 GDP "C5'" "H5''" sing N N 163 GDP "C4'" "O4'" sing N N 164 GDP "C4'" "C3'" sing N N 165 GDP "C4'" "H4'" sing N N 166 GDP "O4'" "C1'" sing N N 167 GDP "C3'" "O3'" sing N N 168 GDP "C3'" "C2'" sing N N 169 GDP "C3'" "H3'" sing N N 170 GDP "O3'" "HO3'" sing N N 171 GDP "C2'" "O2'" sing N N 172 GDP "C2'" "C1'" sing N N 173 GDP "C2'" "H2'" sing N N 174 GDP "O2'" "HO2'" sing N N 175 GDP "C1'" N9 sing N N 176 GDP "C1'" "H1'" sing N N 177 GDP N9 C8 sing Y N 178 GDP N9 C4 sing Y N 179 GDP C8 N7 doub Y N 180 GDP C8 H8 sing N N 181 GDP N7 C5 sing Y N 182 GDP C5 C6 sing N N 183 GDP C5 C4 doub Y N 184 GDP C6 O6 doub N N 185 GDP C6 N1 sing N N 186 GDP N1 C2 sing N N 187 GDP N1 HN1 sing N N 188 GDP C2 N2 sing N N 189 GDP C2 N3 doub N N 190 GDP N2 HN21 sing N N 191 GDP N2 HN22 sing N N 192 GDP N3 C4 sing N N 193 GLN N CA sing N N 194 GLN N H sing N N 195 GLN N H2 sing N N 196 GLN CA C sing N N 197 GLN CA CB sing N N 198 GLN CA HA sing N N 199 GLN C O doub N N 200 GLN C OXT sing N N 201 GLN CB CG sing N N 202 GLN CB HB2 sing N N 203 GLN CB HB3 sing N N 204 GLN CG CD sing N N 205 GLN CG HG2 sing N N 206 GLN CG HG3 sing N N 207 GLN CD OE1 doub N N 208 GLN CD NE2 sing N N 209 GLN NE2 HE21 sing N N 210 GLN NE2 HE22 sing N N 211 GLN OXT HXT sing N N 212 GLU N CA sing N N 213 GLU N H sing N N 214 GLU N H2 sing N N 215 GLU CA C sing N N 216 GLU CA CB sing N N 217 GLU CA HA sing N N 218 GLU C O doub N N 219 GLU C OXT sing N N 220 GLU CB CG sing N N 221 GLU CB HB2 sing N N 222 GLU CB HB3 sing N N 223 GLU CG CD sing N N 224 GLU CG HG2 sing N N 225 GLU CG HG3 sing N N 226 GLU CD OE1 doub N N 227 GLU CD OE2 sing N N 228 GLU OE2 HE2 sing N N 229 GLU OXT HXT sing N N 230 GLY N CA sing N N 231 GLY N H sing N N 232 GLY N H2 sing N N 233 GLY CA C sing N N 234 GLY CA HA2 sing N N 235 GLY CA HA3 sing N N 236 GLY C O doub N N 237 GLY C OXT sing N N 238 GLY OXT HXT sing N N 239 HIS N CA sing N N 240 HIS N H sing N N 241 HIS N H2 sing N N 242 HIS CA C sing N N 243 HIS CA CB sing N N 244 HIS CA HA sing N N 245 HIS C O doub N N 246 HIS C OXT sing N N 247 HIS CB CG sing N N 248 HIS CB HB2 sing N N 249 HIS CB HB3 sing N N 250 HIS CG ND1 sing Y N 251 HIS CG CD2 doub Y N 252 HIS ND1 CE1 doub Y N 253 HIS ND1 HD1 sing N N 254 HIS CD2 NE2 sing Y N 255 HIS CD2 HD2 sing N N 256 HIS CE1 NE2 sing Y N 257 HIS CE1 HE1 sing N N 258 HIS NE2 HE2 sing N N 259 HIS OXT HXT sing N N 260 HOH O H1 sing N N 261 HOH O H2 sing N N 262 ILE N CA sing N N 263 ILE N H sing N N 264 ILE N H2 sing N N 265 ILE CA C sing N N 266 ILE CA CB sing N N 267 ILE CA HA sing N N 268 ILE C O doub N N 269 ILE C OXT sing N N 270 ILE CB CG1 sing N N 271 ILE CB CG2 sing N N 272 ILE CB HB sing N N 273 ILE CG1 CD1 sing N N 274 ILE CG1 HG12 sing N N 275 ILE CG1 HG13 sing N N 276 ILE CG2 HG21 sing N N 277 ILE CG2 HG22 sing N N 278 ILE CG2 HG23 sing N N 279 ILE CD1 HD11 sing N N 280 ILE CD1 HD12 sing N N 281 ILE CD1 HD13 sing N N 282 ILE OXT HXT sing N N 283 LEU N CA sing N N 284 LEU N H sing N N 285 LEU N H2 sing N N 286 LEU CA C sing N N 287 LEU CA CB sing N N 288 LEU CA HA sing N N 289 LEU C O doub N N 290 LEU C OXT sing N N 291 LEU CB CG sing N N 292 LEU CB HB2 sing N N 293 LEU CB HB3 sing N N 294 LEU CG CD1 sing N N 295 LEU CG CD2 sing N N 296 LEU CG HG sing N N 297 LEU CD1 HD11 sing N N 298 LEU CD1 HD12 sing N N 299 LEU CD1 HD13 sing N N 300 LEU CD2 HD21 sing N N 301 LEU CD2 HD22 sing N N 302 LEU CD2 HD23 sing N N 303 LEU OXT HXT sing N N 304 LYS N CA sing N N 305 LYS N H sing N N 306 LYS N H2 sing N N 307 LYS CA C sing N N 308 LYS CA CB sing N N 309 LYS CA HA sing N N 310 LYS C O doub N N 311 LYS C OXT sing N N 312 LYS CB CG sing N N 313 LYS CB HB2 sing N N 314 LYS CB HB3 sing N N 315 LYS CG CD sing N N 316 LYS CG HG2 sing N N 317 LYS CG HG3 sing N N 318 LYS CD CE sing N N 319 LYS CD HD2 sing N N 320 LYS CD HD3 sing N N 321 LYS CE NZ sing N N 322 LYS CE HE2 sing N N 323 LYS CE HE3 sing N N 324 LYS NZ HZ1 sing N N 325 LYS NZ HZ2 sing N N 326 LYS NZ HZ3 sing N N 327 LYS OXT HXT sing N N 328 MET N CA sing N N 329 MET N H sing N N 330 MET N H2 sing N N 331 MET CA C sing N N 332 MET CA CB sing N N 333 MET CA HA sing N N 334 MET C O doub N N 335 MET C OXT sing N N 336 MET CB CG sing N N 337 MET CB HB2 sing N N 338 MET CB HB3 sing N N 339 MET CG SD sing N N 340 MET CG HG2 sing N N 341 MET CG HG3 sing N N 342 MET SD CE sing N N 343 MET CE HE1 sing N N 344 MET CE HE2 sing N N 345 MET CE HE3 sing N N 346 MET OXT HXT sing N N 347 PHE N CA sing N N 348 PHE N H sing N N 349 PHE N H2 sing N N 350 PHE CA C sing N N 351 PHE CA CB sing N N 352 PHE CA HA sing N N 353 PHE C O doub N N 354 PHE C OXT sing N N 355 PHE CB CG sing N N 356 PHE CB HB2 sing N N 357 PHE CB HB3 sing N N 358 PHE CG CD1 doub Y N 359 PHE CG CD2 sing Y N 360 PHE CD1 CE1 sing Y N 361 PHE CD1 HD1 sing N N 362 PHE CD2 CE2 doub Y N 363 PHE CD2 HD2 sing N N 364 PHE CE1 CZ doub Y N 365 PHE CE1 HE1 sing N N 366 PHE CE2 CZ sing Y N 367 PHE CE2 HE2 sing N N 368 PHE CZ HZ sing N N 369 PHE OXT HXT sing N N 370 PRO N CA sing N N 371 PRO N CD sing N N 372 PRO N H sing N N 373 PRO CA C sing N N 374 PRO CA CB sing N N 375 PRO CA HA sing N N 376 PRO C O doub N N 377 PRO C OXT sing N N 378 PRO CB CG sing N N 379 PRO CB HB2 sing N N 380 PRO CB HB3 sing N N 381 PRO CG CD sing N N 382 PRO CG HG2 sing N N 383 PRO CG HG3 sing N N 384 PRO CD HD2 sing N N 385 PRO CD HD3 sing N N 386 PRO OXT HXT sing N N 387 SER N CA sing N N 388 SER N H sing N N 389 SER N H2 sing N N 390 SER CA C sing N N 391 SER CA CB sing N N 392 SER CA HA sing N N 393 SER C O doub N N 394 SER C OXT sing N N 395 SER CB OG sing N N 396 SER CB HB2 sing N N 397 SER CB HB3 sing N N 398 SER OG HG sing N N 399 SER OXT HXT sing N N 400 THR N CA sing N N 401 THR N H sing N N 402 THR N H2 sing N N 403 THR CA C sing N N 404 THR CA CB sing N N 405 THR CA HA sing N N 406 THR C O doub N N 407 THR C OXT sing N N 408 THR CB OG1 sing N N 409 THR CB CG2 sing N N 410 THR CB HB sing N N 411 THR OG1 HG1 sing N N 412 THR CG2 HG21 sing N N 413 THR CG2 HG22 sing N N 414 THR CG2 HG23 sing N N 415 THR OXT HXT sing N N 416 TRP N CA sing N N 417 TRP N H sing N N 418 TRP N H2 sing N N 419 TRP CA C sing N N 420 TRP CA CB sing N N 421 TRP CA HA sing N N 422 TRP C O doub N N 423 TRP C OXT sing N N 424 TRP CB CG sing N N 425 TRP CB HB2 sing N N 426 TRP CB HB3 sing N N 427 TRP CG CD1 doub Y N 428 TRP CG CD2 sing Y N 429 TRP CD1 NE1 sing Y N 430 TRP CD1 HD1 sing N N 431 TRP CD2 CE2 doub Y N 432 TRP CD2 CE3 sing Y N 433 TRP NE1 CE2 sing Y N 434 TRP NE1 HE1 sing N N 435 TRP CE2 CZ2 sing Y N 436 TRP CE3 CZ3 doub Y N 437 TRP CE3 HE3 sing N N 438 TRP CZ2 CH2 doub Y N 439 TRP CZ2 HZ2 sing N N 440 TRP CZ3 CH2 sing Y N 441 TRP CZ3 HZ3 sing N N 442 TRP CH2 HH2 sing N N 443 TRP OXT HXT sing N N 444 TYR N CA sing N N 445 TYR N H sing N N 446 TYR N H2 sing N N 447 TYR CA C sing N N 448 TYR CA CB sing N N 449 TYR CA HA sing N N 450 TYR C O doub N N 451 TYR C OXT sing N N 452 TYR CB CG sing N N 453 TYR CB HB2 sing N N 454 TYR CB HB3 sing N N 455 TYR CG CD1 doub Y N 456 TYR CG CD2 sing Y N 457 TYR CD1 CE1 sing Y N 458 TYR CD1 HD1 sing N N 459 TYR CD2 CE2 doub Y N 460 TYR CD2 HD2 sing N N 461 TYR CE1 CZ doub Y N 462 TYR CE1 HE1 sing N N 463 TYR CE2 CZ sing Y N 464 TYR CE2 HE2 sing N N 465 TYR CZ OH sing N N 466 TYR OH HH sing N N 467 TYR OXT HXT sing N N 468 VAL N CA sing N N 469 VAL N H sing N N 470 VAL N H2 sing N N 471 VAL CA C sing N N 472 VAL CA CB sing N N 473 VAL CA HA sing N N 474 VAL C O doub N N 475 VAL C OXT sing N N 476 VAL CB CG1 sing N N 477 VAL CB CG2 sing N N 478 VAL CB HB sing N N 479 VAL CG1 HG11 sing N N 480 VAL CG1 HG12 sing N N 481 VAL CG1 HG13 sing N N 482 VAL CG2 HG21 sing N N 483 VAL CG2 HG22 sing N N 484 VAL CG2 HG23 sing N N 485 VAL OXT HXT sing N N 486 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 "GUANOSINE-5'-DIPHOSPHATE" GDP 5 '1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE' AFB 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1RRG _pdbx_initial_refinement_model.details 'PDB ENTRY 1RRG and coordinates of arf1[D1-17]/Gea2-Sec7 (Goldberg, J., (1998) Cell 95(2): 237-48)' #