data_1SD5 # _entry.id 1SD5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SD5 pdb_00001sd5 10.2210/pdb1sd5/pdb RCSB RCSB021608 ? ? WWPDB D_1000021608 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-21 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SD5 _pdbx_database_status.recvd_initial_deposition_date 2004-02-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1S8N 'Iodide derivative of Rv1626' unspecified TargetDB Rv1626 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Morth, J.P.' 1 'Feng, V.' 2 'Perry, L.J.' 3 'Svergun, D.I.' 4 'Tucker, P.A.' 5 'TB Structural Genomics Consortium (TBSGC)' 6 # _citation.id primary _citation.title 'The Crystal and Solution Structure of a Putative Transcriptional Antiterminator from Mycobacterium tuberculosis.' _citation.journal_abbrev Structure _citation.journal_volume 12 _citation.page_first 1595 _citation.page_last 1605 _citation.year 2004 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15341725 _citation.pdbx_database_id_DOI 10.1016/j.str.2004.06.018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morth, J.P.' 1 ? primary 'Feng, V.' 2 ? primary 'Perry, L.J.' 3 ? primary 'Svergun, D.I.' 4 ? primary 'Tucker, P.A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative antiterminator' 22700.156 1 ? ? ? 'phosphorylation dependent transcriptional antitermination regulator' 2 non-polymer syn 'IODIDE ION' 126.904 15 ? ? ? ? 3 water nat water 18.015 206 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEI ASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKG LLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEVVLETLGTPKDT ; _entity_poly.pdbx_seq_one_letter_code_can ;MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEI ASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKG LLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEVVLETLGTPKDT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Rv1626 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLY n 1 4 PRO n 1 5 THR n 1 6 THR n 1 7 ASP n 1 8 ALA n 1 9 ASP n 1 10 ALA n 1 11 ALA n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 ARG n 1 16 VAL n 1 17 LEU n 1 18 ILE n 1 19 ALA n 1 20 GLU n 1 21 ASP n 1 22 GLU n 1 23 ALA n 1 24 LEU n 1 25 ILE n 1 26 ARG n 1 27 MET n 1 28 ASP n 1 29 LEU n 1 30 ALA n 1 31 GLU n 1 32 MET n 1 33 LEU n 1 34 ARG n 1 35 GLU n 1 36 GLU n 1 37 GLY n 1 38 TYR n 1 39 GLU n 1 40 ILE n 1 41 VAL n 1 42 GLY n 1 43 GLU n 1 44 ALA n 1 45 GLY n 1 46 ASP n 1 47 GLY n 1 48 GLN n 1 49 GLU n 1 50 ALA n 1 51 VAL n 1 52 GLU n 1 53 LEU n 1 54 ALA n 1 55 GLU n 1 56 LEU n 1 57 HIS n 1 58 LYS n 1 59 PRO n 1 60 ASP n 1 61 LEU n 1 62 VAL n 1 63 ILE n 1 64 MET n 1 65 ASP n 1 66 VAL n 1 67 LYS n 1 68 MET n 1 69 PRO n 1 70 ARG n 1 71 ARG n 1 72 ASP n 1 73 GLY n 1 74 ILE n 1 75 ASP n 1 76 ALA n 1 77 ALA n 1 78 SER n 1 79 GLU n 1 80 ILE n 1 81 ALA n 1 82 SER n 1 83 LYS n 1 84 ARG n 1 85 ILE n 1 86 ALA n 1 87 PRO n 1 88 ILE n 1 89 VAL n 1 90 VAL n 1 91 LEU n 1 92 THR n 1 93 ALA n 1 94 PHE n 1 95 SER n 1 96 GLN n 1 97 ARG n 1 98 ASP n 1 99 LEU n 1 100 VAL n 1 101 GLU n 1 102 ARG n 1 103 ALA n 1 104 ARG n 1 105 ASP n 1 106 ALA n 1 107 GLY n 1 108 ALA n 1 109 MET n 1 110 ALA n 1 111 TYR n 1 112 LEU n 1 113 VAL n 1 114 LYS n 1 115 PRO n 1 116 PHE n 1 117 SER n 1 118 ILE n 1 119 SER n 1 120 ASP n 1 121 LEU n 1 122 ILE n 1 123 PRO n 1 124 ALA n 1 125 ILE n 1 126 GLU n 1 127 LEU n 1 128 ALA n 1 129 VAL n 1 130 SER n 1 131 ARG n 1 132 PHE n 1 133 ARG n 1 134 GLU n 1 135 ILE n 1 136 THR n 1 137 ALA n 1 138 LEU n 1 139 GLU n 1 140 GLY n 1 141 GLU n 1 142 VAL n 1 143 ALA n 1 144 THR n 1 145 LEU n 1 146 SER n 1 147 GLU n 1 148 ARG n 1 149 LEU n 1 150 GLU n 1 151 THR n 1 152 ARG n 1 153 LYS n 1 154 LEU n 1 155 VAL n 1 156 GLU n 1 157 ARG n 1 158 ALA n 1 159 LYS n 1 160 GLY n 1 161 LEU n 1 162 LEU n 1 163 GLN n 1 164 THR n 1 165 LYS n 1 166 HIS n 1 167 GLY n 1 168 MET n 1 169 THR n 1 170 GLU n 1 171 PRO n 1 172 ASP n 1 173 ALA n 1 174 PHE n 1 175 LYS n 1 176 TRP n 1 177 ILE n 1 178 GLN n 1 179 ARG n 1 180 ALA n 1 181 ALA n 1 182 MET n 1 183 ASP n 1 184 ARG n 1 185 ARG n 1 186 THR n 1 187 THR n 1 188 MET n 1 189 LYS n 1 190 ARG n 1 191 VAL n 1 192 ALA n 1 193 GLU n 1 194 VAL n 1 195 VAL n 1 196 LEU n 1 197 GLU n 1 198 THR n 1 199 LEU n 1 200 GLY n 1 201 THR n 1 202 PRO n 1 203 LYS n 1 204 ASP n 1 205 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Mycobacterium _entity_src_gen.pdbx_gene_src_gene rv1626 _entity_src_gen.gene_src_species 'Mycobacterium tuberculosis' _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)RP' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 GLY 3 3 ? ? ? A . n A 1 4 PRO 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 THR 6 6 ? ? ? A . n A 1 7 ASP 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ASP 9 9 ? ? ? A . n A 1 10 ALA 10 10 ? ? ? A . n A 1 11 ALA 11 11 ? ? ? A . n A 1 12 VAL 12 12 ? ? ? A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 HIS 166 166 166 HIS HIS A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 PHE 174 174 174 PHE PHE A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 TRP 176 176 176 TRP TRP A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ARG 179 179 179 ARG ARG A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 MET 182 182 182 MET MET A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 MET 188 188 188 MET MET A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 THR 201 201 ? ? ? A . n A 1 202 PRO 202 202 ? ? ? A . n A 1 203 LYS 203 203 ? ? ? A . n A 1 204 ASP 204 204 ? ? ? A . n A 1 205 THR 205 205 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 401 401 IOD IOD A . C 2 IOD 1 402 402 IOD IOD A . D 2 IOD 1 403 403 IOD IOD A . E 2 IOD 1 404 404 IOD IOD A . F 2 IOD 1 405 405 IOD IOD A . G 2 IOD 1 406 406 IOD IOD A . H 2 IOD 1 407 407 IOD IOD A . I 2 IOD 1 408 408 IOD IOD A . J 2 IOD 1 410 410 IOD IOD A . K 2 IOD 1 411 411 IOD IOD A . L 2 IOD 1 412 412 IOD IOD A . M 2 IOD 1 413 413 IOD IOD A . N 2 IOD 1 414 414 IOD IOD A . O 2 IOD 1 415 415 IOD IOD A . P 2 IOD 1 416 416 IOD IOD A . Q 3 HOH 1 417 1 HOH HOH A . Q 3 HOH 2 418 2 HOH HOH A . Q 3 HOH 3 419 3 HOH HOH A . Q 3 HOH 4 420 4 HOH HOH A . Q 3 HOH 5 421 5 HOH HOH A . Q 3 HOH 6 422 6 HOH HOH A . Q 3 HOH 7 423 7 HOH HOH A . Q 3 HOH 8 424 8 HOH HOH A . Q 3 HOH 9 425 9 HOH HOH A . Q 3 HOH 10 426 10 HOH HOH A . Q 3 HOH 11 427 11 HOH HOH A . Q 3 HOH 12 428 12 HOH HOH A . Q 3 HOH 13 429 13 HOH HOH A . Q 3 HOH 14 430 14 HOH HOH A . Q 3 HOH 15 431 15 HOH HOH A . Q 3 HOH 16 432 16 HOH HOH A . Q 3 HOH 17 433 17 HOH HOH A . Q 3 HOH 18 434 18 HOH HOH A . Q 3 HOH 19 435 19 HOH HOH A . Q 3 HOH 20 436 20 HOH HOH A . Q 3 HOH 21 437 21 HOH HOH A . Q 3 HOH 22 438 22 HOH HOH A . Q 3 HOH 23 439 23 HOH HOH A . Q 3 HOH 24 440 24 HOH HOH A . Q 3 HOH 25 441 25 HOH HOH A . Q 3 HOH 26 442 26 HOH HOH A . Q 3 HOH 27 443 27 HOH HOH A . Q 3 HOH 28 444 28 HOH HOH A . Q 3 HOH 29 445 29 HOH HOH A . Q 3 HOH 30 446 30 HOH HOH A . Q 3 HOH 31 447 31 HOH HOH A . Q 3 HOH 32 448 32 HOH HOH A . Q 3 HOH 33 449 33 HOH HOH A . Q 3 HOH 34 450 34 HOH HOH A . Q 3 HOH 35 451 35 HOH HOH A . Q 3 HOH 36 452 36 HOH HOH A . Q 3 HOH 37 453 37 HOH HOH A . Q 3 HOH 38 454 38 HOH HOH A . Q 3 HOH 39 455 39 HOH HOH A . Q 3 HOH 40 456 40 HOH HOH A . Q 3 HOH 41 457 41 HOH HOH A . Q 3 HOH 42 458 42 HOH HOH A . Q 3 HOH 43 459 43 HOH HOH A . Q 3 HOH 44 460 44 HOH HOH A . Q 3 HOH 45 461 45 HOH HOH A . Q 3 HOH 46 462 46 HOH HOH A . Q 3 HOH 47 463 47 HOH HOH A . Q 3 HOH 48 464 48 HOH HOH A . Q 3 HOH 49 465 49 HOH HOH A . Q 3 HOH 50 466 50 HOH HOH A . Q 3 HOH 51 467 51 HOH HOH A . Q 3 HOH 52 468 52 HOH HOH A . Q 3 HOH 53 469 53 HOH HOH A . Q 3 HOH 54 470 54 HOH HOH A . Q 3 HOH 55 471 55 HOH HOH A . Q 3 HOH 56 472 56 HOH HOH A . Q 3 HOH 57 473 57 HOH HOH A . Q 3 HOH 58 474 58 HOH HOH A . Q 3 HOH 59 475 59 HOH HOH A . Q 3 HOH 60 476 60 HOH HOH A . Q 3 HOH 61 477 61 HOH HOH A . Q 3 HOH 62 478 62 HOH HOH A . Q 3 HOH 63 479 63 HOH HOH A . Q 3 HOH 64 480 64 HOH HOH A . Q 3 HOH 65 481 65 HOH HOH A . Q 3 HOH 66 482 66 HOH HOH A . Q 3 HOH 67 483 67 HOH HOH A . Q 3 HOH 68 484 68 HOH HOH A . Q 3 HOH 69 485 69 HOH HOH A . Q 3 HOH 70 486 70 HOH HOH A . Q 3 HOH 71 487 71 HOH HOH A . Q 3 HOH 72 488 72 HOH HOH A . Q 3 HOH 73 489 73 HOH HOH A . Q 3 HOH 74 490 74 HOH HOH A . Q 3 HOH 75 491 75 HOH HOH A . Q 3 HOH 76 492 76 HOH HOH A . Q 3 HOH 77 493 77 HOH HOH A . Q 3 HOH 78 494 78 HOH HOH A . Q 3 HOH 79 495 79 HOH HOH A . Q 3 HOH 80 496 80 HOH HOH A . Q 3 HOH 81 497 81 HOH HOH A . Q 3 HOH 82 498 82 HOH HOH A . Q 3 HOH 83 499 83 HOH HOH A . Q 3 HOH 84 500 84 HOH HOH A . Q 3 HOH 85 501 85 HOH HOH A . Q 3 HOH 86 502 86 HOH HOH A . Q 3 HOH 87 503 87 HOH HOH A . Q 3 HOH 88 504 88 HOH HOH A . Q 3 HOH 89 505 89 HOH HOH A . Q 3 HOH 90 506 90 HOH HOH A . Q 3 HOH 91 507 91 HOH HOH A . Q 3 HOH 92 508 92 HOH HOH A . Q 3 HOH 93 509 93 HOH HOH A . Q 3 HOH 94 510 94 HOH HOH A . Q 3 HOH 95 511 95 HOH HOH A . Q 3 HOH 96 512 96 HOH HOH A . Q 3 HOH 97 513 97 HOH HOH A . Q 3 HOH 98 514 98 HOH HOH A . Q 3 HOH 99 515 99 HOH HOH A . Q 3 HOH 100 516 100 HOH HOH A . Q 3 HOH 101 517 101 HOH HOH A . Q 3 HOH 102 518 102 HOH HOH A . Q 3 HOH 103 519 103 HOH HOH A . Q 3 HOH 104 520 104 HOH HOH A . Q 3 HOH 105 521 105 HOH HOH A . Q 3 HOH 106 522 106 HOH HOH A . Q 3 HOH 107 523 107 HOH HOH A . Q 3 HOH 108 524 108 HOH HOH A . Q 3 HOH 109 525 109 HOH HOH A . Q 3 HOH 110 526 110 HOH HOH A . Q 3 HOH 111 527 111 HOH HOH A . Q 3 HOH 112 528 112 HOH HOH A . Q 3 HOH 113 529 113 HOH HOH A . Q 3 HOH 114 530 114 HOH HOH A . Q 3 HOH 115 531 115 HOH HOH A . Q 3 HOH 116 532 116 HOH HOH A . Q 3 HOH 117 533 117 HOH HOH A . Q 3 HOH 118 534 118 HOH HOH A . Q 3 HOH 119 535 119 HOH HOH A . Q 3 HOH 120 536 120 HOH HOH A . Q 3 HOH 121 537 121 HOH HOH A . Q 3 HOH 122 538 122 HOH HOH A . Q 3 HOH 123 539 123 HOH HOH A . Q 3 HOH 124 540 124 HOH HOH A . Q 3 HOH 125 541 125 HOH HOH A . Q 3 HOH 126 542 126 HOH HOH A . Q 3 HOH 127 543 127 HOH HOH A . Q 3 HOH 128 544 128 HOH HOH A . Q 3 HOH 129 545 129 HOH HOH A . Q 3 HOH 130 546 130 HOH HOH A . Q 3 HOH 131 547 131 HOH HOH A . Q 3 HOH 132 548 132 HOH HOH A . Q 3 HOH 133 549 133 HOH HOH A . Q 3 HOH 134 550 134 HOH HOH A . Q 3 HOH 135 551 135 HOH HOH A . Q 3 HOH 136 552 136 HOH HOH A . Q 3 HOH 137 553 137 HOH HOH A . Q 3 HOH 138 554 138 HOH HOH A . Q 3 HOH 139 555 139 HOH HOH A . Q 3 HOH 140 556 140 HOH HOH A . Q 3 HOH 141 557 141 HOH HOH A . Q 3 HOH 142 558 142 HOH HOH A . Q 3 HOH 143 559 143 HOH HOH A . Q 3 HOH 144 560 144 HOH HOH A . Q 3 HOH 145 561 145 HOH HOH A . Q 3 HOH 146 562 146 HOH HOH A . Q 3 HOH 147 563 147 HOH HOH A . Q 3 HOH 148 564 148 HOH HOH A . Q 3 HOH 149 565 149 HOH HOH A . Q 3 HOH 150 566 150 HOH HOH A . Q 3 HOH 151 567 151 HOH HOH A . Q 3 HOH 152 568 152 HOH HOH A . Q 3 HOH 153 569 153 HOH HOH A . Q 3 HOH 154 570 154 HOH HOH A . Q 3 HOH 155 571 155 HOH HOH A . Q 3 HOH 156 572 156 HOH HOH A . Q 3 HOH 157 573 157 HOH HOH A . Q 3 HOH 158 574 158 HOH HOH A . Q 3 HOH 159 575 159 HOH HOH A . Q 3 HOH 160 576 160 HOH HOH A . Q 3 HOH 161 577 161 HOH HOH A . Q 3 HOH 162 578 162 HOH HOH A . Q 3 HOH 163 579 163 HOH HOH A . Q 3 HOH 164 580 164 HOH HOH A . Q 3 HOH 165 581 165 HOH HOH A . Q 3 HOH 166 582 166 HOH HOH A . Q 3 HOH 167 583 167 HOH HOH A . Q 3 HOH 168 584 168 HOH HOH A . Q 3 HOH 169 585 169 HOH HOH A . Q 3 HOH 170 586 170 HOH HOH A . Q 3 HOH 171 587 171 HOH HOH A . Q 3 HOH 172 588 172 HOH HOH A . Q 3 HOH 173 589 173 HOH HOH A . Q 3 HOH 174 590 174 HOH HOH A . Q 3 HOH 175 591 175 HOH HOH A . Q 3 HOH 176 592 176 HOH HOH A . Q 3 HOH 177 593 177 HOH HOH A . Q 3 HOH 178 594 178 HOH HOH A . Q 3 HOH 179 595 179 HOH HOH A . Q 3 HOH 180 596 180 HOH HOH A . Q 3 HOH 181 597 181 HOH HOH A . Q 3 HOH 182 598 182 HOH HOH A . Q 3 HOH 183 599 183 HOH HOH A . Q 3 HOH 184 600 184 HOH HOH A . Q 3 HOH 185 601 185 HOH HOH A . Q 3 HOH 186 602 186 HOH HOH A . Q 3 HOH 187 603 187 HOH HOH A . Q 3 HOH 188 604 188 HOH HOH A . Q 3 HOH 189 605 189 HOH HOH A . Q 3 HOH 190 606 190 HOH HOH A . Q 3 HOH 191 607 191 HOH HOH A . Q 3 HOH 192 608 192 HOH HOH A . Q 3 HOH 193 609 193 HOH HOH A . Q 3 HOH 194 610 194 HOH HOH A . Q 3 HOH 195 611 195 HOH HOH A . Q 3 HOH 196 612 196 HOH HOH A . Q 3 HOH 197 613 197 HOH HOH A . Q 3 HOH 198 614 198 HOH HOH A . Q 3 HOH 199 615 199 HOH HOH A . Q 3 HOH 200 616 200 HOH HOH A . Q 3 HOH 201 617 201 HOH HOH A . Q 3 HOH 202 618 202 HOH HOH A . Q 3 HOH 203 619 204 HOH HOH A . Q 3 HOH 204 620 205 HOH HOH A . Q 3 HOH 205 621 206 HOH HOH A . Q 3 HOH 206 622 207 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 14 ? CG ? A ARG 14 CG 2 1 Y 0 A ARG 14 ? CD ? A ARG 14 CD 3 1 Y 0 A ARG 14 ? NE ? A ARG 14 NE 4 1 Y 0 A ARG 14 ? CZ ? A ARG 14 CZ 5 1 Y 0 A ARG 14 ? NH1 ? A ARG 14 NH1 6 1 Y 0 A ARG 14 ? NH2 ? A ARG 14 NH2 7 1 Y 0 A ARG 102 ? CG ? A ARG 102 CG 8 1 Y 0 A ARG 102 ? CD ? A ARG 102 CD 9 1 Y 0 A ARG 102 ? NE ? A ARG 102 NE 10 1 Y 0 A ARG 102 ? CZ ? A ARG 102 CZ 11 1 Y 0 A ARG 102 ? NH1 ? A ARG 102 NH1 12 1 Y 0 A ARG 102 ? NH2 ? A ARG 102 NH2 13 1 Y 0 A LYS 175 ? CG ? A LYS 175 CG 14 1 Y 0 A LYS 175 ? CD ? A LYS 175 CD 15 1 Y 0 A LYS 175 ? CE ? A LYS 175 CE 16 1 Y 0 A LYS 175 ? NZ ? A LYS 175 NZ 17 1 Y 0 A GLU 197 ? CD ? A GLU 197 CD 18 1 Y 0 A GLU 197 ? OE1 ? A GLU 197 OE1 19 1 Y 0 A GLU 197 ? OE2 ? A GLU 197 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1SD5 _cell.length_a 44.558 _cell.length_b 44.558 _cell.length_c 180.965 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SD5 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1SD5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.83 _exptl_crystal.description ? _exptl_crystal.density_Matthews 1.98 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4 _exptl_crystal_grow.pdbx_details '15 % PEG 1.5K, pure water, pH 4, Micro Batch, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-01-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.981 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7A' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.981 # _reflns.entry_id 1SD5 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.68 _reflns.d_resolution_low 40 _reflns.number_all 22233 _reflns.number_obs 22233 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.036 _reflns.pdbx_netI_over_sigmaI 32.9 _reflns.B_iso_Wilson_estimate 18.16 _reflns.pdbx_redundancy 11 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1SD5 _refine.ls_number_reflns_obs 20724 _refine.ls_number_reflns_all 20732 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 1.68 _refine.ls_percent_reflns_obs 99.96 _refine.ls_R_factor_obs 0.17302 _refine.ls_R_factor_all 0.17429 _refine.ls_R_factor_R_work 0.1708 _refine.ls_R_factor_R_free 0.21637 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1118 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 11.868 _refine.aniso_B[1][1] -0.14 _refine.aniso_B[2][2] -0.14 _refine.aniso_B[3][3] 0.27 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.102 _refine.pdbx_overall_ESU_R_Free 0.106 _refine.overall_SU_ML 0.062 _refine.overall_SU_B 1.834 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1469 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 206 _refine_hist.number_atoms_total 1690 _refine_hist.d_res_high 1.68 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1487 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 1471 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.947 1.987 ? 2006 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.622 3.000 ? 3395 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 14.015 5.000 ? 187 'X-RAY DIFFRACTION' ? r_chiral_restr 0.067 0.200 ? 241 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1622 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 286 'X-RAY DIFFRACTION' ? r_nbd_refined 0.236 0.200 ? 355 'X-RAY DIFFRACTION' ? r_nbd_other 0.265 0.200 ? 1766 'X-RAY DIFFRACTION' ? r_nbtor_other 0.085 0.200 ? 950 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.172 0.200 ? 126 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.274 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.328 0.200 ? 63 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.184 0.200 ? 19 'X-RAY DIFFRACTION' ? r_mcbond_it 1.377 1.500 ? 941 'X-RAY DIFFRACTION' ? r_mcangle_it 2.307 2.000 ? 1517 'X-RAY DIFFRACTION' ? r_scbond_it 3.939 3.000 ? 546 'X-RAY DIFFRACTION' ? r_scangle_it 6.091 4.500 ? 489 'X-RAY DIFFRACTION' ? r_sphericity_free 13.669 2.000 ? 19 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.680 _refine_ls_shell.d_res_low 1.723 _refine_ls_shell.number_reflns_R_work 1475 _refine_ls_shell.R_factor_R_work 0.21 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.283 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 88 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1SD5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SD5 _struct.title 'Crystal structure of Rv1626' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SD5 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;rv1626, transcriptional, antiterminator, two components system, structural genomics, PSI, Protein Structure Initiative, TB Structural Genomics Consortium, TBSGC, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? Q N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O06143_MYCTU _struct_ref.pdbx_db_accession O06143 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEI ASKRIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKG LLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEVVLETLGTPKDT ; _struct_ref.pdbx_align_begin 4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SD5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 205 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O06143 _struct_ref_seq.db_align_beg 4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 208 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 205 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 22 ? GLU A 36 ? GLU A 22 GLU A 36 1 ? 15 HELX_P HELX_P2 2 ASP A 46 ? LYS A 58 ? ASP A 46 LYS A 58 1 ? 13 HELX_P HELX_P3 3 ASP A 72 ? LYS A 83 ? ASP A 72 LYS A 83 1 ? 12 HELX_P HELX_P4 4 GLN A 96 ? ARG A 104 ? GLN A 96 ARG A 104 1 ? 9 HELX_P HELX_P5 5 ASP A 105 ? GLY A 107 ? ASP A 105 GLY A 107 5 ? 3 HELX_P HELX_P6 6 SER A 117 ? VAL A 142 ? SER A 117 VAL A 142 1 ? 26 HELX_P HELX_P7 7 THR A 144 ? GLY A 167 ? THR A 144 GLY A 167 1 ? 24 HELX_P HELX_P8 8 THR A 169 ? ARG A 185 ? THR A 169 ARG A 185 1 ? 17 HELX_P HELX_P9 9 THR A 187 ? GLY A 200 ? THR A 187 GLY A 200 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 114 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 114 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 115 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 115 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.20 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 39 ? ALA A 44 ? GLU A 39 ALA A 44 A 2 ARG A 15 ? ALA A 19 ? ARG A 15 ALA A 19 A 3 LEU A 61 ? ASP A 65 ? LEU A 61 ASP A 65 A 4 ILE A 88 ? ALA A 93 ? ILE A 88 ALA A 93 A 5 ALA A 110 ? LYS A 114 ? ALA A 110 LYS A 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 44 ? O ALA A 44 N ILE A 18 ? N ILE A 18 A 2 3 N ALA A 19 ? N ALA A 19 O ILE A 63 ? O ILE A 63 A 3 4 N MET A 64 ? N MET A 64 O LEU A 91 ? O LEU A 91 A 4 5 N VAL A 90 ? N VAL A 90 O ALA A 110 ? O ALA A 110 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IOD 401 ? 1 'BINDING SITE FOR RESIDUE IOD A 401' AC2 Software A IOD 407 ? 3 'BINDING SITE FOR RESIDUE IOD A 407' AC3 Software A IOD 408 ? 3 'BINDING SITE FOR RESIDUE IOD A 408' AC4 Software A IOD 410 ? 1 'BINDING SITE FOR RESIDUE IOD A 410' AC5 Software A IOD 411 ? 1 'BINDING SITE FOR RESIDUE IOD A 411' AC6 Software A IOD 412 ? 2 'BINDING SITE FOR RESIDUE IOD A 412' AC7 Software A IOD 413 ? 2 'BINDING SITE FOR RESIDUE IOD A 413' AC8 Software A IOD 414 ? 3 'BINDING SITE FOR RESIDUE IOD A 414' AC9 Software A IOD 415 ? 3 'BINDING SITE FOR RESIDUE IOD A 415' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 ARG A 184 ? ARG A 184 . ? 1_555 ? 2 AC2 3 ARG A 131 ? ARG A 131 . ? 1_555 ? 3 AC2 3 ILE A 135 ? ILE A 135 . ? 1_555 ? 4 AC2 3 ARG A 152 ? ARG A 152 . ? 1_555 ? 5 AC3 3 GLU A 141 ? GLU A 141 . ? 1_555 ? 6 AC3 3 LYS A 189 ? LYS A 189 . ? 1_555 ? 7 AC3 3 HOH Q . ? HOH A 601 . ? 1_555 ? 8 AC4 1 ARG A 70 ? ARG A 70 . ? 8_555 ? 9 AC5 1 GLN A 48 ? GLN A 48 . ? 3_554 ? 10 AC6 2 GLU A 49 ? GLU A 49 . ? 1_555 ? 11 AC6 2 IOD M . ? IOD A 413 . ? 1_555 ? 12 AC7 2 ARG A 185 ? ARG A 185 . ? 4_455 ? 13 AC7 2 IOD L . ? IOD A 412 . ? 1_555 ? 14 AC8 3 PRO A 115 ? PRO A 115 . ? 1_555 ? 15 AC8 3 PHE A 116 ? PHE A 116 . ? 1_555 ? 16 AC8 3 GLU A 193 ? GLU A 193 . ? 4_555 ? 17 AC9 3 THR A 198 ? THR A 198 . ? 1_555 ? 18 AC9 3 LEU A 199 ? LEU A 199 . ? 1_555 ? 19 AC9 3 HOH Q . ? HOH A 605 . ? 6_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 197 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 197 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.756 _pdbx_validate_rmsd_bond.bond_target_value 1.515 _pdbx_validate_rmsd_bond.bond_deviation 0.241 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 70 ? ? 86.06 -61.97 2 1 THR A 186 ? ? -142.24 -158.05 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'TB Structural Genomics Consortium' _pdbx_SG_project.initial_of_center TBSGC # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A GLY 3 ? A GLY 3 4 1 Y 1 A PRO 4 ? A PRO 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A THR 6 ? A THR 6 7 1 Y 1 A ASP 7 ? A ASP 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A ASP 9 ? A ASP 9 10 1 Y 1 A ALA 10 ? A ALA 10 11 1 Y 1 A ALA 11 ? A ALA 11 12 1 Y 1 A VAL 12 ? A VAL 12 13 1 Y 1 A THR 201 ? A THR 201 14 1 Y 1 A PRO 202 ? A PRO 202 15 1 Y 1 A LYS 203 ? A LYS 203 16 1 Y 1 A ASP 204 ? A ASP 204 17 1 Y 1 A THR 205 ? A THR 205 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 HIS N N N N 106 HIS CA C N S 107 HIS C C N N 108 HIS O O N N 109 HIS CB C N N 110 HIS CG C Y N 111 HIS ND1 N Y N 112 HIS CD2 C Y N 113 HIS CE1 C Y N 114 HIS NE2 N Y N 115 HIS OXT O N N 116 HIS H H N N 117 HIS H2 H N N 118 HIS HA H N N 119 HIS HB2 H N N 120 HIS HB3 H N N 121 HIS HD1 H N N 122 HIS HD2 H N N 123 HIS HE1 H N N 124 HIS HE2 H N N 125 HIS HXT H N N 126 HOH O O N N 127 HOH H1 H N N 128 HOH H2 H N N 129 ILE N N N N 130 ILE CA C N S 131 ILE C C N N 132 ILE O O N N 133 ILE CB C N S 134 ILE CG1 C N N 135 ILE CG2 C N N 136 ILE CD1 C N N 137 ILE OXT O N N 138 ILE H H N N 139 ILE H2 H N N 140 ILE HA H N N 141 ILE HB H N N 142 ILE HG12 H N N 143 ILE HG13 H N N 144 ILE HG21 H N N 145 ILE HG22 H N N 146 ILE HG23 H N N 147 ILE HD11 H N N 148 ILE HD12 H N N 149 ILE HD13 H N N 150 ILE HXT H N N 151 IOD I I N N 152 LEU N N N N 153 LEU CA C N S 154 LEU C C N N 155 LEU O O N N 156 LEU CB C N N 157 LEU CG C N N 158 LEU CD1 C N N 159 LEU CD2 C N N 160 LEU OXT O N N 161 LEU H H N N 162 LEU H2 H N N 163 LEU HA H N N 164 LEU HB2 H N N 165 LEU HB3 H N N 166 LEU HG H N N 167 LEU HD11 H N N 168 LEU HD12 H N N 169 LEU HD13 H N N 170 LEU HD21 H N N 171 LEU HD22 H N N 172 LEU HD23 H N N 173 LEU HXT H N N 174 LYS N N N N 175 LYS CA C N S 176 LYS C C N N 177 LYS O O N N 178 LYS CB C N N 179 LYS CG C N N 180 LYS CD C N N 181 LYS CE C N N 182 LYS NZ N N N 183 LYS OXT O N N 184 LYS H H N N 185 LYS H2 H N N 186 LYS HA H N N 187 LYS HB2 H N N 188 LYS HB3 H N N 189 LYS HG2 H N N 190 LYS HG3 H N N 191 LYS HD2 H N N 192 LYS HD3 H N N 193 LYS HE2 H N N 194 LYS HE3 H N N 195 LYS HZ1 H N N 196 LYS HZ2 H N N 197 LYS HZ3 H N N 198 LYS HXT H N N 199 MET N N N N 200 MET CA C N S 201 MET C C N N 202 MET O O N N 203 MET CB C N N 204 MET CG C N N 205 MET SD S N N 206 MET CE C N N 207 MET OXT O N N 208 MET H H N N 209 MET H2 H N N 210 MET HA H N N 211 MET HB2 H N N 212 MET HB3 H N N 213 MET HG2 H N N 214 MET HG3 H N N 215 MET HE1 H N N 216 MET HE2 H N N 217 MET HE3 H N N 218 MET HXT H N N 219 PHE N N N N 220 PHE CA C N S 221 PHE C C N N 222 PHE O O N N 223 PHE CB C N N 224 PHE CG C Y N 225 PHE CD1 C Y N 226 PHE CD2 C Y N 227 PHE CE1 C Y N 228 PHE CE2 C Y N 229 PHE CZ C Y N 230 PHE OXT O N N 231 PHE H H N N 232 PHE H2 H N N 233 PHE HA H N N 234 PHE HB2 H N N 235 PHE HB3 H N N 236 PHE HD1 H N N 237 PHE HD2 H N N 238 PHE HE1 H N N 239 PHE HE2 H N N 240 PHE HZ H N N 241 PHE HXT H N N 242 PRO N N N N 243 PRO CA C N S 244 PRO C C N N 245 PRO O O N N 246 PRO CB C N N 247 PRO CG C N N 248 PRO CD C N N 249 PRO OXT O N N 250 PRO H H N N 251 PRO HA H N N 252 PRO HB2 H N N 253 PRO HB3 H N N 254 PRO HG2 H N N 255 PRO HG3 H N N 256 PRO HD2 H N N 257 PRO HD3 H N N 258 PRO HXT H N N 259 SER N N N N 260 SER CA C N S 261 SER C C N N 262 SER O O N N 263 SER CB C N N 264 SER OG O N N 265 SER OXT O N N 266 SER H H N N 267 SER H2 H N N 268 SER HA H N N 269 SER HB2 H N N 270 SER HB3 H N N 271 SER HG H N N 272 SER HXT H N N 273 THR N N N N 274 THR CA C N S 275 THR C C N N 276 THR O O N N 277 THR CB C N R 278 THR OG1 O N N 279 THR CG2 C N N 280 THR OXT O N N 281 THR H H N N 282 THR H2 H N N 283 THR HA H N N 284 THR HB H N N 285 THR HG1 H N N 286 THR HG21 H N N 287 THR HG22 H N N 288 THR HG23 H N N 289 THR HXT H N N 290 TRP N N N N 291 TRP CA C N S 292 TRP C C N N 293 TRP O O N N 294 TRP CB C N N 295 TRP CG C Y N 296 TRP CD1 C Y N 297 TRP CD2 C Y N 298 TRP NE1 N Y N 299 TRP CE2 C Y N 300 TRP CE3 C Y N 301 TRP CZ2 C Y N 302 TRP CZ3 C Y N 303 TRP CH2 C Y N 304 TRP OXT O N N 305 TRP H H N N 306 TRP H2 H N N 307 TRP HA H N N 308 TRP HB2 H N N 309 TRP HB3 H N N 310 TRP HD1 H N N 311 TRP HE1 H N N 312 TRP HE3 H N N 313 TRP HZ2 H N N 314 TRP HZ3 H N N 315 TRP HH2 H N N 316 TRP HXT H N N 317 TYR N N N N 318 TYR CA C N S 319 TYR C C N N 320 TYR O O N N 321 TYR CB C N N 322 TYR CG C Y N 323 TYR CD1 C Y N 324 TYR CD2 C Y N 325 TYR CE1 C Y N 326 TYR CE2 C Y N 327 TYR CZ C Y N 328 TYR OH O N N 329 TYR OXT O N N 330 TYR H H N N 331 TYR H2 H N N 332 TYR HA H N N 333 TYR HB2 H N N 334 TYR HB3 H N N 335 TYR HD1 H N N 336 TYR HD2 H N N 337 TYR HE1 H N N 338 TYR HE2 H N N 339 TYR HH H N N 340 TYR HXT H N N 341 VAL N N N N 342 VAL CA C N S 343 VAL C C N N 344 VAL O O N N 345 VAL CB C N N 346 VAL CG1 C N N 347 VAL CG2 C N N 348 VAL OXT O N N 349 VAL H H N N 350 VAL H2 H N N 351 VAL HA H N N 352 VAL HB H N N 353 VAL HG11 H N N 354 VAL HG12 H N N 355 VAL HG13 H N N 356 VAL HG21 H N N 357 VAL HG22 H N N 358 VAL HG23 H N N 359 VAL HXT H N N 360 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 HIS N CA sing N N 100 HIS N H sing N N 101 HIS N H2 sing N N 102 HIS CA C sing N N 103 HIS CA CB sing N N 104 HIS CA HA sing N N 105 HIS C O doub N N 106 HIS C OXT sing N N 107 HIS CB CG sing N N 108 HIS CB HB2 sing N N 109 HIS CB HB3 sing N N 110 HIS CG ND1 sing Y N 111 HIS CG CD2 doub Y N 112 HIS ND1 CE1 doub Y N 113 HIS ND1 HD1 sing N N 114 HIS CD2 NE2 sing Y N 115 HIS CD2 HD2 sing N N 116 HIS CE1 NE2 sing Y N 117 HIS CE1 HE1 sing N N 118 HIS NE2 HE2 sing N N 119 HIS OXT HXT sing N N 120 HOH O H1 sing N N 121 HOH O H2 sing N N 122 ILE N CA sing N N 123 ILE N H sing N N 124 ILE N H2 sing N N 125 ILE CA C sing N N 126 ILE CA CB sing N N 127 ILE CA HA sing N N 128 ILE C O doub N N 129 ILE C OXT sing N N 130 ILE CB CG1 sing N N 131 ILE CB CG2 sing N N 132 ILE CB HB sing N N 133 ILE CG1 CD1 sing N N 134 ILE CG1 HG12 sing N N 135 ILE CG1 HG13 sing N N 136 ILE CG2 HG21 sing N N 137 ILE CG2 HG22 sing N N 138 ILE CG2 HG23 sing N N 139 ILE CD1 HD11 sing N N 140 ILE CD1 HD12 sing N N 141 ILE CD1 HD13 sing N N 142 ILE OXT HXT sing N N 143 LEU N CA sing N N 144 LEU N H sing N N 145 LEU N H2 sing N N 146 LEU CA C sing N N 147 LEU CA CB sing N N 148 LEU CA HA sing N N 149 LEU C O doub N N 150 LEU C OXT sing N N 151 LEU CB CG sing N N 152 LEU CB HB2 sing N N 153 LEU CB HB3 sing N N 154 LEU CG CD1 sing N N 155 LEU CG CD2 sing N N 156 LEU CG HG sing N N 157 LEU CD1 HD11 sing N N 158 LEU CD1 HD12 sing N N 159 LEU CD1 HD13 sing N N 160 LEU CD2 HD21 sing N N 161 LEU CD2 HD22 sing N N 162 LEU CD2 HD23 sing N N 163 LEU OXT HXT sing N N 164 LYS N CA sing N N 165 LYS N H sing N N 166 LYS N H2 sing N N 167 LYS CA C sing N N 168 LYS CA CB sing N N 169 LYS CA HA sing N N 170 LYS C O doub N N 171 LYS C OXT sing N N 172 LYS CB CG sing N N 173 LYS CB HB2 sing N N 174 LYS CB HB3 sing N N 175 LYS CG CD sing N N 176 LYS CG HG2 sing N N 177 LYS CG HG3 sing N N 178 LYS CD CE sing N N 179 LYS CD HD2 sing N N 180 LYS CD HD3 sing N N 181 LYS CE NZ sing N N 182 LYS CE HE2 sing N N 183 LYS CE HE3 sing N N 184 LYS NZ HZ1 sing N N 185 LYS NZ HZ2 sing N N 186 LYS NZ HZ3 sing N N 187 LYS OXT HXT sing N N 188 MET N CA sing N N 189 MET N H sing N N 190 MET N H2 sing N N 191 MET CA C sing N N 192 MET CA CB sing N N 193 MET CA HA sing N N 194 MET C O doub N N 195 MET C OXT sing N N 196 MET CB CG sing N N 197 MET CB HB2 sing N N 198 MET CB HB3 sing N N 199 MET CG SD sing N N 200 MET CG HG2 sing N N 201 MET CG HG3 sing N N 202 MET SD CE sing N N 203 MET CE HE1 sing N N 204 MET CE HE2 sing N N 205 MET CE HE3 sing N N 206 MET OXT HXT sing N N 207 PHE N CA sing N N 208 PHE N H sing N N 209 PHE N H2 sing N N 210 PHE CA C sing N N 211 PHE CA CB sing N N 212 PHE CA HA sing N N 213 PHE C O doub N N 214 PHE C OXT sing N N 215 PHE CB CG sing N N 216 PHE CB HB2 sing N N 217 PHE CB HB3 sing N N 218 PHE CG CD1 doub Y N 219 PHE CG CD2 sing Y N 220 PHE CD1 CE1 sing Y N 221 PHE CD1 HD1 sing N N 222 PHE CD2 CE2 doub Y N 223 PHE CD2 HD2 sing N N 224 PHE CE1 CZ doub Y N 225 PHE CE1 HE1 sing N N 226 PHE CE2 CZ sing Y N 227 PHE CE2 HE2 sing N N 228 PHE CZ HZ sing N N 229 PHE OXT HXT sing N N 230 PRO N CA sing N N 231 PRO N CD sing N N 232 PRO N H sing N N 233 PRO CA C sing N N 234 PRO CA CB sing N N 235 PRO CA HA sing N N 236 PRO C O doub N N 237 PRO C OXT sing N N 238 PRO CB CG sing N N 239 PRO CB HB2 sing N N 240 PRO CB HB3 sing N N 241 PRO CG CD sing N N 242 PRO CG HG2 sing N N 243 PRO CG HG3 sing N N 244 PRO CD HD2 sing N N 245 PRO CD HD3 sing N N 246 PRO OXT HXT sing N N 247 SER N CA sing N N 248 SER N H sing N N 249 SER N H2 sing N N 250 SER CA C sing N N 251 SER CA CB sing N N 252 SER CA HA sing N N 253 SER C O doub N N 254 SER C OXT sing N N 255 SER CB OG sing N N 256 SER CB HB2 sing N N 257 SER CB HB3 sing N N 258 SER OG HG sing N N 259 SER OXT HXT sing N N 260 THR N CA sing N N 261 THR N H sing N N 262 THR N H2 sing N N 263 THR CA C sing N N 264 THR CA CB sing N N 265 THR CA HA sing N N 266 THR C O doub N N 267 THR C OXT sing N N 268 THR CB OG1 sing N N 269 THR CB CG2 sing N N 270 THR CB HB sing N N 271 THR OG1 HG1 sing N N 272 THR CG2 HG21 sing N N 273 THR CG2 HG22 sing N N 274 THR CG2 HG23 sing N N 275 THR OXT HXT sing N N 276 TRP N CA sing N N 277 TRP N H sing N N 278 TRP N H2 sing N N 279 TRP CA C sing N N 280 TRP CA CB sing N N 281 TRP CA HA sing N N 282 TRP C O doub N N 283 TRP C OXT sing N N 284 TRP CB CG sing N N 285 TRP CB HB2 sing N N 286 TRP CB HB3 sing N N 287 TRP CG CD1 doub Y N 288 TRP CG CD2 sing Y N 289 TRP CD1 NE1 sing Y N 290 TRP CD1 HD1 sing N N 291 TRP CD2 CE2 doub Y N 292 TRP CD2 CE3 sing Y N 293 TRP NE1 CE2 sing Y N 294 TRP NE1 HE1 sing N N 295 TRP CE2 CZ2 sing Y N 296 TRP CE3 CZ3 doub Y N 297 TRP CE3 HE3 sing N N 298 TRP CZ2 CH2 doub Y N 299 TRP CZ2 HZ2 sing N N 300 TRP CZ3 CH2 sing Y N 301 TRP CZ3 HZ3 sing N N 302 TRP CH2 HH2 sing N N 303 TRP OXT HXT sing N N 304 TYR N CA sing N N 305 TYR N H sing N N 306 TYR N H2 sing N N 307 TYR CA C sing N N 308 TYR CA CB sing N N 309 TYR CA HA sing N N 310 TYR C O doub N N 311 TYR C OXT sing N N 312 TYR CB CG sing N N 313 TYR CB HB2 sing N N 314 TYR CB HB3 sing N N 315 TYR CG CD1 doub Y N 316 TYR CG CD2 sing Y N 317 TYR CD1 CE1 sing Y N 318 TYR CD1 HD1 sing N N 319 TYR CD2 CE2 doub Y N 320 TYR CD2 HD2 sing N N 321 TYR CE1 CZ doub Y N 322 TYR CE1 HE1 sing N N 323 TYR CE2 CZ sing Y N 324 TYR CE2 HE2 sing N N 325 TYR CZ OH sing N N 326 TYR OH HH sing N N 327 TYR OXT HXT sing N N 328 VAL N CA sing N N 329 VAL N H sing N N 330 VAL N H2 sing N N 331 VAL CA C sing N N 332 VAL CA CB sing N N 333 VAL CA HA sing N N 334 VAL C O doub N N 335 VAL C OXT sing N N 336 VAL CB CG1 sing N N 337 VAL CB CG2 sing N N 338 VAL CB HB sing N N 339 VAL CG1 HG11 sing N N 340 VAL CG1 HG12 sing N N 341 VAL CG1 HG13 sing N N 342 VAL CG2 HG21 sing N N 343 VAL CG2 HG22 sing N N 344 VAL CG2 HG23 sing N N 345 VAL OXT HXT sing N N 346 # _atom_sites.entry_id 1SD5 _atom_sites.fract_transf_matrix[1][1] 0.022443 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022443 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005526 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O S # loop_