data_1SHE # _entry.id 1SHE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1SHE RCSB RCSB021709 WWPDB D_1000021709 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2007-05-22 _pdbx_database_PDB_obs_spr.pdb_id 2PK8 _pdbx_database_PDB_obs_spr.replace_pdb_id 1SHE _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id Pfu-871755-001 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1SHE _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-02-25 _pdbx_database_status.status_code OBS _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Z.J.' 1 'Tempel, W.' 2 'Chen, L.' 3 'Shah, A.' 4 'Lee, D.' 5 'Kelley, L.-L.C.' 6 'Dillard, B.D.' 7 'Rose, J.P.' 8 'Sugar, F.J.' 9 'Jenny Jr., F.E.' 10 'Lee, H.S.' 11 'Izumi, M.' 12 'Shah, C.' 13 'Poole III, F.L.' 14 'Adams, M.W.W.' 15 'Richardson, J.S.' 16 'Richardson, D.C.' 17 'Wang, B.C.' 18 'Southeast Collaboratory for Structural Genomics (SECSG)' 19 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Conserved hypothetical protein from Pyrococcus furiosus Pfu-871755-001' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'Automated MAD and MIR structure solution' 'Acta Crystallogr., Sect.D' 55 849 886 1999 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444999000839 2 'Maximum likelihood density modification' 'Acta Crystallogr., Sect.D' 56 965 972 2000 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444900005072 3 'Refinement of Macromolecular Structures by the Maximum-Likelihood Method' 'Acta Crystallogr., Sect.D' 53 240 255 1997 ABCRE6 DK 0907-4449 0766 ? ? 10.1107/S0907444996012255 4 'Automated refinement for protein crystallography' 'Methods Enzymol.' 277 269 305 1997 MENZAU US 0076-6879 0878 ? ? '10.1016/S0076-6879(97)77016-2' 5 'Processing of X-ray Diffraction Data Collected in Oscillation Mode' 'Methods Enzymol.' 276 307 326 1997 MENZAU US 0076-6879 0878 ? ? ? 6 'Structure validation by C[alpha] geometry: [phi],[psi] and C[beta] deviation' 'Proteins: Struct., Funct., Genet.' 50 437 450 2003 PSFGEY US 0887-3585 0867 ? ? 10.1002/prot.10286 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liu, Z.J.' 1 primary 'Tempel, W.' 2 primary 'Chen, L.' 3 primary 'Shah, A.' 4 primary 'Lee, D.' 5 primary 'Kelley, L.-L.C.' 6 primary 'Dillard, B.D.' 7 primary 'Rose, J.P.' 8 primary 'Sugar, F.J.' 9 primary 'Jenny Jr., F.E.' 10 primary 'Lee, H.S.' 11 primary 'Izumi, M.' 12 primary 'Shah, C.' 13 primary 'Poole III, F.L.' 14 primary 'Adams, M.W.W.' 15 primary 'Richardson, J.S.' 16 primary 'Richardson, D.C.' 17 primary 'Wang, B.C.' 18 primary 'SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS' 19 1 'Terwilliger, T.C.' 20 1 'Berendzen, J.' 21 2 'Terwilliger, T.C.' 22 3 'Murshudov, G.N.' 23 3 'Vagin, A.A.' 24 3 'Dodson, E.J.' 25 4 'Lamzin, V.S.' 26 4 'Wilson, K.S.' 27 5 'Vagin, A.' 28 5 'Teplyakov, A.' 29 5 'Otwinowski, Z.' 30 5 'Minor, W.' 31 6 'Lovell, S.C.' 32 6 'Davis, I.W.' 33 6 'Arendall III, W.B.' 34 6 'de Bakker, P.I.W.' 35 6 'Word, J.M.' 36 6 'Prisant, M.G.' 37 6 'Richardson, J.S.' 38 6 'Richardson, D.C.' 39 # _cell.length_a 47.075 _cell.length_b 47.075 _cell.length_c 83.953 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 1SHE _cell.pdbx_unique_axis ? _cell.Z_PDB 6 # _symmetry.Int_Tables_number 154 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 1SHE _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein PF0899' 11570.343 1 ? ? ? ;THE PROTEIN WAS CLONED, EXPRESSED AND PURIFIED BY THE SECSG PYROCOCCUS PROTEIN PRODUCTION GROUP (M.W.W.ADAMS, P.S.BRERETON, M.IZUMI, F.E.JENNEY JR., H.-S.LEE, F.L.POOLE II, C.SHAH, F.SUGAR) UNDER THE DIRECTION OF M.W.W.ADAMS. ; 2 non-polymer syn 'GOLD ION' 196.967 1 ? ? ? ? 3 water nat water 18.015 39 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AHHHHHHGSSTRGDLIRILGEIEEKMNELKMDGFNPDIILFGREAYNFLSNLLKKEMEEEGPFTHVSNIKIEILEELGGD AVVIDSKVLGLVPGAAKRIKIIK ; _entity_poly.pdbx_seq_one_letter_code_can ;AHHHHHHGSSTRGDLIRILGEIEEKMNELKMDGFNPDIILFGREAYNFLSNLLKKEMEEEGPFTHVSNIKIEILEELGGD AVVIDSKVLGLVPGAAKRIKIIK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Pfu-871755-001 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 SER n 1 10 SER n 1 11 THR n 1 12 ARG n 1 13 GLY n 1 14 ASP n 1 15 LEU n 1 16 ILE n 1 17 ARG n 1 18 ILE n 1 19 LEU n 1 20 GLY n 1 21 GLU n 1 22 ILE n 1 23 GLU n 1 24 GLU n 1 25 LYS n 1 26 MET n 1 27 ASN n 1 28 GLU n 1 29 LEU n 1 30 LYS n 1 31 MET n 1 32 ASP n 1 33 GLY n 1 34 PHE n 1 35 ASN n 1 36 PRO n 1 37 ASP n 1 38 ILE n 1 39 ILE n 1 40 LEU n 1 41 PHE n 1 42 GLY n 1 43 ARG n 1 44 GLU n 1 45 ALA n 1 46 TYR n 1 47 ASN n 1 48 PHE n 1 49 LEU n 1 50 SER n 1 51 ASN n 1 52 LEU n 1 53 LEU n 1 54 LYS n 1 55 LYS n 1 56 GLU n 1 57 MET n 1 58 GLU n 1 59 GLU n 1 60 GLU n 1 61 GLY n 1 62 PRO n 1 63 PHE n 1 64 THR n 1 65 HIS n 1 66 VAL n 1 67 SER n 1 68 ASN n 1 69 ILE n 1 70 LYS n 1 71 ILE n 1 72 GLU n 1 73 ILE n 1 74 LEU n 1 75 GLU n 1 76 GLU n 1 77 LEU n 1 78 GLY n 1 79 GLY n 1 80 ASP n 1 81 ALA n 1 82 VAL n 1 83 VAL n 1 84 ILE n 1 85 ASP n 1 86 SER n 1 87 LYS n 1 88 VAL n 1 89 LEU n 1 90 GLY n 1 91 LEU n 1 92 VAL n 1 93 PRO n 1 94 GLY n 1 95 ALA n 1 96 ALA n 1 97 LYS n 1 98 ARG n 1 99 ILE n 1 100 LYS n 1 101 ILE n 1 102 ILE n 1 103 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Archaea _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus DSM 3638' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name bacteria _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Star DE3 pRIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET24d Bam' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8U2E0_PYRFU _struct_ref.pdbx_db_accession Q8U2E0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STRGDLIRILGEIEEKMNELKMDGFNPDIILFGREAYNFLSNLLKKEMEEEGPFTHVSNIKIEILEELGGDAVVIDSKVL GLVPGAAKRIKIIK ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SHE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8U2E0 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 95 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 95 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1SHE ALA A 1 ? UNP Q8U2E0 ? ? 'CLONING ARTIFACT' -7 1 1 1SHE HIS A 2 ? UNP Q8U2E0 ? ? 'HIS TAG' -6 2 1 1SHE HIS A 3 ? UNP Q8U2E0 ? ? 'HIS TAG' -5 3 1 1SHE HIS A 4 ? UNP Q8U2E0 ? ? 'HIS TAG' -4 4 1 1SHE HIS A 5 ? UNP Q8U2E0 ? ? 'HIS TAG' -3 5 1 1SHE HIS A 6 ? UNP Q8U2E0 ? ? 'HIS TAG' -2 6 1 1SHE HIS A 7 ? UNP Q8U2E0 ? ? 'HIS TAG' -1 7 1 1SHE GLY A 8 ? UNP Q8U2E0 ? ? 'CLONING ARTIFACT' 0 8 1 1SHE SER A 9 ? UNP Q8U2E0 ? ? 'CLONING ARTIFACT' 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 AU non-polymer . 'GOLD ION' ? 'Au 1' 196.967 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1SHE _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 46.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'modified microbatch' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.9 _exptl_crystal_grow.pdbx_details '8% PEG-4000, 100mM sodium acetate, pH 3.9, modified microbatch, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-11-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI CHANNEL 220' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 1SHE _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.85 _reflns.number_obs 9476 _reflns.number_all ? _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.044 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.92 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.251 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1SHE _refine.ls_number_reflns_obs 8894 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 97.14 _refine.ls_R_factor_obs 0.21101 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2101 _refine.ls_R_factor_R_free 0.22955 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 443 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 13.092 _refine.aniso_B[1][1] 1.04 _refine.aniso_B[2][2] 1.04 _refine.aniso_B[3][3] -1.56 _refine.aniso_B[1][2] 0.52 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.147 _refine.pdbx_overall_ESU_R_Free 0.129 _refine.overall_SU_ML 0.102 _refine.overall_SU_B 3.568 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 743 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 783 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 20.00 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 751 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.271 2.002 ? 1007 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.594 5.000 ? 93 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.087 0.200 ? 118 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 538 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.194 0.200 ? 323 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.301 0.200 ? 524 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.101 0.200 ? 35 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.192 0.200 ? 26 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.197 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.620 1.500 ? 466 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.090 2.000 ? 754 'X-RAY DIFFRACTION' ? r_scbond_it 1.696 3.000 ? 285 'X-RAY DIFFRACTION' ? r_scangle_it 2.900 4.500 ? 253 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.852 _refine_ls_shell.d_res_low 1.900 _refine_ls_shell.number_reflns_R_work 559 _refine_ls_shell.R_factor_R_work 0.36 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1SHE _struct.title 'Conserved hypothetical protein from Pyrococcus furiosus Pfu-871755-001' _struct.pdbx_descriptor 'hypothetical protein PF0899' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SHE _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown Function' _struct_keywords.text ;Structural genomics, Pyrococcus furiosus, conserved hypothetical protein, PSI, Protein Structure Initiative, Southeast Collaboratory for Structural Genomics, SECSG, Unknown Function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details unknown _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 10 ? ASP A 32 ? SER A 2 ASP A 24 1 ? 23 HELX_P HELX_P2 2 GLY A 42 ? GLU A 58 ? GLY A 34 GLU A 50 1 ? 17 HELX_P HELX_P3 3 GLU A 75 ? GLY A 78 ? GLU A 67 GLY A 70 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 61 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 53 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 62 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 54 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.47 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 65 ? VAL A 66 ? HIS A 57 VAL A 58 A 2 ILE A 69 ? ILE A 73 ? ILE A 61 ILE A 65 A 3 ILE A 38 ? PHE A 41 ? ILE A 30 PHE A 33 A 4 ASP A 80 ? ILE A 84 ? ASP A 72 ILE A 76 A 5 ALA A 96 ? LYS A 100 ? ALA A 88 LYS A 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 66 ? N VAL A 58 O ILE A 69 ? O ILE A 61 A 2 3 O LYS A 70 ? O LYS A 62 N ILE A 39 ? N ILE A 31 A 3 4 N LEU A 40 ? N LEU A 32 O VAL A 82 ? O VAL A 74 A 4 5 N ALA A 81 ? N ALA A 73 O ILE A 99 ? O ILE A 91 # _atom_sites.entry_id 1SHE _atom_sites.fract_transf_matrix[1][1] 0.0212 _atom_sites.fract_transf_matrix[1][2] 0.0123 _atom_sites.fract_transf_matrix[1][3] 0.0000 _atom_sites.fract_transf_matrix[2][1] 0.0000 _atom_sites.fract_transf_matrix[2][2] 0.0245 _atom_sites.fract_transf_matrix[2][3] 0.0000 _atom_sites.fract_transf_matrix[3][1] 0.0000 _atom_sites.fract_transf_matrix[3][2] 0.0000 _atom_sites.fract_transf_matrix[3][3] 0.0119 _atom_sites.fract_transf_vector[1] 0.0000 _atom_sites.fract_transf_vector[2] 0.0000 _atom_sites.fract_transf_vector[3] 0.0000 # loop_ _atom_type.symbol AU C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -7 ? ? ? A . n A 1 2 HIS 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 ? ? ? A . n A 1 8 GLY 8 0 ? ? ? A . n A 1 9 SER 9 1 ? ? ? A . n A 1 10 SER 10 2 2 SER SER A . n A 1 11 THR 11 3 3 THR THR A . n A 1 12 ARG 12 4 4 ARG ARG A . n A 1 13 GLY 13 5 5 GLY GLY A . n A 1 14 ASP 14 6 6 ASP ASP A . n A 1 15 LEU 15 7 7 LEU LEU A . n A 1 16 ILE 16 8 8 ILE ILE A . n A 1 17 ARG 17 9 9 ARG ARG A . n A 1 18 ILE 18 10 10 ILE ILE A . n A 1 19 LEU 19 11 11 LEU LEU A . n A 1 20 GLY 20 12 12 GLY GLY A . n A 1 21 GLU 21 13 13 GLU GLU A . n A 1 22 ILE 22 14 14 ILE ILE A . n A 1 23 GLU 23 15 15 GLU GLU A . n A 1 24 GLU 24 16 16 GLU GLU A . n A 1 25 LYS 25 17 17 LYS LYS A . n A 1 26 MET 26 18 18 MET MET A . n A 1 27 ASN 27 19 19 ASN ASN A . n A 1 28 GLU 28 20 20 GLU GLU A . n A 1 29 LEU 29 21 21 LEU LEU A . n A 1 30 LYS 30 22 22 LYS LYS A . n A 1 31 MET 31 23 23 MET MET A . n A 1 32 ASP 32 24 24 ASP ASP A . n A 1 33 GLY 33 25 25 GLY GLY A . n A 1 34 PHE 34 26 26 PHE PHE A . n A 1 35 ASN 35 27 27 ASN ASN A . n A 1 36 PRO 36 28 28 PRO PRO A . n A 1 37 ASP 37 29 29 ASP ASP A . n A 1 38 ILE 38 30 30 ILE ILE A . n A 1 39 ILE 39 31 31 ILE ILE A . n A 1 40 LEU 40 32 32 LEU LEU A . n A 1 41 PHE 41 33 33 PHE PHE A . n A 1 42 GLY 42 34 34 GLY GLY A . n A 1 43 ARG 43 35 35 ARG ARG A . n A 1 44 GLU 44 36 36 GLU GLU A . n A 1 45 ALA 45 37 37 ALA ALA A . n A 1 46 TYR 46 38 38 TYR TYR A . n A 1 47 ASN 47 39 39 ASN ASN A . n A 1 48 PHE 48 40 40 PHE PHE A . n A 1 49 LEU 49 41 41 LEU LEU A . n A 1 50 SER 50 42 42 SER SER A . n A 1 51 ASN 51 43 43 ASN ASN A . n A 1 52 LEU 52 44 44 LEU LEU A . n A 1 53 LEU 53 45 45 LEU LEU A . n A 1 54 LYS 54 46 46 LYS LYS A . n A 1 55 LYS 55 47 47 LYS LYS A . n A 1 56 GLU 56 48 48 GLU GLU A . n A 1 57 MET 57 49 49 MET MET A . n A 1 58 GLU 58 50 50 GLU GLU A . n A 1 59 GLU 59 51 51 GLU GLU A . n A 1 60 GLU 60 52 52 GLU GLU A . n A 1 61 GLY 61 53 53 GLY GLY A . n A 1 62 PRO 62 54 54 PRO PRO A . n A 1 63 PHE 63 55 55 PHE PHE A . n A 1 64 THR 64 56 56 THR THR A . n A 1 65 HIS 65 57 57 HIS HIS A . n A 1 66 VAL 66 58 58 VAL VAL A . n A 1 67 SER 67 59 59 SER SER A . n A 1 68 ASN 68 60 60 ASN ASN A . n A 1 69 ILE 69 61 61 ILE ILE A . n A 1 70 LYS 70 62 62 LYS LYS A . n A 1 71 ILE 71 63 63 ILE ILE A . n A 1 72 GLU 72 64 64 GLU GLU A . n A 1 73 ILE 73 65 65 ILE ILE A . n A 1 74 LEU 74 66 66 LEU LEU A . n A 1 75 GLU 75 67 67 GLU GLU A . n A 1 76 GLU 76 68 68 GLU GLU A . n A 1 77 LEU 77 69 69 LEU LEU A . n A 1 78 GLY 78 70 70 GLY GLY A . n A 1 79 GLY 79 71 71 GLY GLY A . n A 1 80 ASP 80 72 72 ASP ASP A . n A 1 81 ALA 81 73 73 ALA ALA A . n A 1 82 VAL 82 74 74 VAL VAL A . n A 1 83 VAL 83 75 75 VAL VAL A . n A 1 84 ILE 84 76 76 ILE ILE A . n A 1 85 ASP 85 77 77 ASP ASP A . n A 1 86 SER 86 78 78 SER SER A . n A 1 87 LYS 87 79 79 LYS LYS A . n A 1 88 VAL 88 80 80 VAL VAL A . n A 1 89 LEU 89 81 81 LEU LEU A . n A 1 90 GLY 90 82 82 GLY GLY A . n A 1 91 LEU 91 83 83 LEU LEU A . n A 1 92 VAL 92 84 84 VAL VAL A . n A 1 93 PRO 93 85 85 PRO PRO A . n A 1 94 GLY 94 86 86 GLY GLY A . n A 1 95 ALA 95 87 87 ALA ALA A . n A 1 96 ALA 96 88 88 ALA ALA A . n A 1 97 LYS 97 89 89 LYS LYS A . n A 1 98 ARG 98 90 90 ARG ARG A . n A 1 99 ILE 99 91 91 ILE ILE A . n A 1 100 LYS 100 92 92 LYS LYS A . n A 1 101 ILE 101 93 93 ILE ILE A . n A 1 102 ILE 102 94 94 ILE ILE A . n A 1 103 LYS 103 95 95 LYS LYS A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Southeast Collaboratory for Structural Genomics' _pdbx_SG_project.initial_of_center SECSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AU 1 101 101 AU AU ? . C 3 HOH 1 2 2 HOH HOH ? . C 3 HOH 2 3 3 HOH HOH ? . C 3 HOH 3 4 4 HOH HOH ? . C 3 HOH 4 5 5 HOH HOH ? . C 3 HOH 5 7 7 HOH HOH ? . C 3 HOH 6 8 8 HOH HOH ? . C 3 HOH 7 10 10 HOH HOH ? . C 3 HOH 8 11 11 HOH HOH ? . C 3 HOH 9 12 12 HOH HOH ? . C 3 HOH 10 13 13 HOH HOH ? . C 3 HOH 11 14 14 HOH HOH ? . C 3 HOH 12 15 15 HOH HOH ? . C 3 HOH 13 16 16 HOH HOH ? . C 3 HOH 14 17 17 HOH HOH ? . C 3 HOH 15 19 19 HOH HOH ? . C 3 HOH 16 20 20 HOH HOH ? . C 3 HOH 17 21 21 HOH HOH ? . C 3 HOH 18 22 22 HOH HOH ? . C 3 HOH 19 23 23 HOH HOH ? . C 3 HOH 20 25 25 HOH HOH ? . C 3 HOH 21 26 26 HOH HOH ? . C 3 HOH 22 27 27 HOH HOH ? . C 3 HOH 23 29 29 HOH HOH ? . C 3 HOH 24 30 30 HOH HOH ? . C 3 HOH 25 31 31 HOH HOH ? . C 3 HOH 26 33 33 HOH HOH ? . C 3 HOH 27 34 34 HOH HOH ? . C 3 HOH 28 36 36 HOH HOH ? . C 3 HOH 29 48 48 HOH HOH ? . C 3 HOH 30 50 50 HOH HOH ? . C 3 HOH 31 51 51 HOH HOH ? . C 3 HOH 32 52 52 HOH HOH ? . C 3 HOH 33 53 53 HOH HOH ? . C 3 HOH 34 54 54 HOH HOH ? . C 3 HOH 35 55 55 HOH HOH ? . C 3 HOH 36 56 56 HOH HOH ? . C 3 HOH 37 57 57 HOH HOH ? . C 3 HOH 38 58 58 HOH HOH ? . C 3 HOH 39 61 61 HOH HOH ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-10 2 'Structure model' 1 1 2007-05-22 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 4.8450 22.8440 15.9860 0.1313 0.1226 0.1315 0.0073 0.0442 -0.1087 3.8619 9.3783 16.0013 1.9504 -2.8208 -9.6952 -0.0639 -0.2416 0.0965 0.3063 0.0808 -0.6071 -0.6323 0.3871 -0.0169 'X-RAY DIFFRACTION' 2 ? refined 3.6690 20.7750 4.6350 0.0959 0.0946 0.0193 0.0278 0.0320 -0.0062 4.4325 -0.1299 4.0686 2.1664 -3.4921 -1.2683 0.0495 0.3980 0.1582 0.0571 -0.1791 0.2505 -0.1862 -0.3236 0.1296 'X-RAY DIFFRACTION' 3 ? refined 2.1310 7.3490 17.1930 0.2553 0.0315 0.1811 0.0323 0.0551 0.0068 10.9635 2.0968 11.5554 3.1280 -8.7016 -4.0087 -0.2931 -0.2073 -0.2953 0.1659 -0.0935 0.1762 0.5095 -0.0512 0.3867 'X-RAY DIFFRACTION' 4 ? refined -7.3680 5.1470 16.4390 0.3852 0.3548 0.3727 -0.0306 0.0072 -0.0074 7.8573 22.0251 64.7008 27.6378 3.3979 -7.2419 -0.8721 -0.2073 0.0522 -0.0120 0.1416 2.3120 0.7269 -0.1386 0.7305 'X-RAY DIFFRACTION' 5 ? refined 2.0020 12.3000 7.4660 0.1448 0.0757 0.1182 -0.0157 0.0370 -0.0238 5.4003 2.2059 4.9745 -0.0502 -1.9705 -1.2074 0.0141 0.1825 -0.5150 -0.1274 -0.1935 0.2635 0.3197 -0.4007 0.1795 'X-RAY DIFFRACTION' 6 ? refined 9.7030 20.9210 4.6570 0.0210 0.0603 0.0731 0.0192 0.0337 0.0023 1.1274 6.1910 9.0522 1.2822 -1.4411 -3.7793 -0.0455 -0.2189 0.0883 0.2231 -0.1660 -0.1468 -0.3372 0.0803 0.2116 'X-RAY DIFFRACTION' 7 ? refined 13.7580 24.4600 0.2570 0.1979 0.1902 0.1680 -0.0202 -0.0505 -0.1085 -0.0394 -1.6250 -0.4524 -0.0802 0.2640 0.5263 -0.0136 -0.0598 -0.0304 -0.0226 -0.1314 -0.7306 0.1353 0.2049 0.1450 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 . . 2 . . 25 ? A A 'X-RAY DIFFRACTION' ? 2 2 . . 26 . . 33 ? A A 'X-RAY DIFFRACTION' ? 3 3 . . 34 . . 50 ? A A 'X-RAY DIFFRACTION' ? 4 4 . . 51 . . 53 ? A A 'X-RAY DIFFRACTION' ? 5 5 . . 54 . . 70 ? A A 'X-RAY DIFFRACTION' ? 6 6 . . 71 . . 94 ? A A 'X-RAY DIFFRACTION' ? 7 7 . . 101 . . 101 ? A A 'X-RAY DIFFRACTION' ? # _pdbx_phasing_dm.entry_id 1SHE _pdbx_phasing_dm.fom_acentric 0.86 _pdbx_phasing_dm.fom_centric 0.85 _pdbx_phasing_dm.fom 0.85 _pdbx_phasing_dm.reflns_acentric 1988 _pdbx_phasing_dm.reflns_centric 585 _pdbx_phasing_dm.reflns 2573 # loop_ _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 19.809 8.3 0.93 0.81 0.93 56 48 104 8.3 5.2 0.91 0.90 0.91 247 116 363 5.2 4.1 0.92 0.91 0.92 331 112 443 4.1 3.6 0.89 0.85 0.88 343 92 435 3.6 3.1 0.83 0.78 0.82 613 133 746 3.1 2.9 0.78 0.82 0.79 398 84 482 # _phasing.method MIRAS # _phasing_MIR.entry_id 1SHE _phasing_MIR.d_res_high 2.900 _phasing_MIR.d_res_low 20.000 _phasing_MIR.reflns 2573 _phasing_MIR.FOM 0.68 # loop_ _phasing_MIR_shell.d_res_low _phasing_MIR_shell.d_res_high _phasing_MIR_shell.reflns _phasing_MIR_shell.FOM 20.000 9.64 143 0.75 9.64 6.36 224 0.79 6.36 5.06 276 0.72 5.06 4.32 322 0.71 4.32 3.83 357 0.62 3.83 3.48 384 0.63 3.48 3.21 421 0.63 3.21 2.99 446 0.66 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SOLVE 2.05 30-Jul-2003 program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 1 RESOLVE 2.05 29-May-2003 program 'Terwilliger, T. C' terwilliger@LANL.gov 'density modification' http://www.solve.lanl.gov/ ? ? 2 REFMAC5 refmac_5.1.24 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 3 ARP/wARP . ? program 'Victor S. Lamzin' ? refinement http://www.embl-hamburg.de/ARP/ ? ? 4 HKL/scalepack . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data processing' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 5 MAR . ? ? ? ? 'data reduction' ? ? ? 6 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 7 REFMAC 5.1.24 ? ? ? ? refinement ? ? ? 8 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 15 ? CG ? A GLU 23 CG 2 1 Y 1 A GLU 15 ? CD ? A GLU 23 CD 3 1 Y 1 A GLU 15 ? OE1 ? A GLU 23 OE1 4 1 Y 1 A GLU 15 ? OE2 ? A GLU 23 OE2 5 1 Y 1 A LYS 46 ? NZ ? A LYS 54 NZ 6 1 Y 1 A GLU 52 ? CB ? A GLU 60 CB 7 1 Y 1 A GLU 52 ? CG ? A GLU 60 CG 8 1 Y 1 A GLU 52 ? CD ? A GLU 60 CD 9 1 Y 1 A GLU 52 ? OE1 ? A GLU 60 OE1 10 1 Y 1 A GLU 52 ? OE2 ? A GLU 60 OE2 11 1 Y 1 A LYS 95 ? CD ? A LYS 103 CD 12 1 Y 1 A LYS 95 ? CE ? A LYS 103 CE 13 1 Y 1 A LYS 95 ? NZ ? A LYS 103 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -7 ? A ALA 1 2 1 Y 1 A HIS -6 ? A HIS 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A HIS -1 ? A HIS 7 8 1 Y 1 A GLY 0 ? A GLY 8 9 1 Y 1 A SER 1 ? A SER 9 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'GOLD ION' AU 3 water HOH #