data_1SIG # _entry.id 1SIG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1SIG WWPDB D_1000176384 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SIG _pdbx_database_status.recvd_initial_deposition_date 1997-02-18 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Malhotra, A.' 1 'Severinova, E.' 2 'Darst, S.A.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase.' 'Cell(Cambridge,Mass.)' 87 127 136 1996 CELLB5 US 0092-8674 0998 ? 8858155 '10.1016/S0092-8674(00)81329-X' 1 'Domain Organization of the Escherichia Coli RNA Polymerase Sigma 70 Subunit' J.Mol.Biol. 263 637 ? 1996 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Malhotra, A.' 1 primary 'Severinova, E.' 2 primary 'Darst, S.A.' 3 1 'Severinova, E.' 4 1 'Severinov, K.' 5 1 'Fenyo, D.' 6 1 'Marr, M.' 7 1 'Brody, E.N.' 8 1 'Roberts, J.W.' 9 1 'Chait, B.T.' 10 1 'Darst, S.A.' 11 # _cell.entry_id 1SIG _cell.length_a 79.229 _cell.length_b 79.229 _cell.length_c 134.060 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SIG _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA POLYMERASE PRIMARY SIGMA FACTOR' 39092.883 1 ? ? 'RESIDUES 114 - 448' ? 2 water nat water 18.015 111 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name SIGMA70 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMEGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYNRVEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQED LDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVPKQFDYL VNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEE ETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFST YATWWIRQAITRSIADQAR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMEGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYNRVEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQED LDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVPKQFDYL VNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEE ETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFST YATWWIRQAITRSIADQAR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 GLY n 1 7 GLU n 1 8 ILE n 1 9 ASP n 1 10 ILE n 1 11 ALA n 1 12 LYS n 1 13 ARG n 1 14 ILE n 1 15 GLU n 1 16 ASP n 1 17 GLY n 1 18 ILE n 1 19 ASN n 1 20 GLN n 1 21 VAL n 1 22 GLN n 1 23 CYS n 1 24 SER n 1 25 VAL n 1 26 ALA n 1 27 GLU n 1 28 TYR n 1 29 PRO n 1 30 GLU n 1 31 ALA n 1 32 ILE n 1 33 THR n 1 34 TYR n 1 35 LEU n 1 36 LEU n 1 37 GLU n 1 38 GLN n 1 39 TYR n 1 40 ASN n 1 41 ARG n 1 42 VAL n 1 43 GLU n 1 44 ALA n 1 45 GLU n 1 46 GLU n 1 47 ALA n 1 48 ARG n 1 49 LEU n 1 50 SER n 1 51 ASP n 1 52 LEU n 1 53 ILE n 1 54 THR n 1 55 GLY n 1 56 PHE n 1 57 VAL n 1 58 ASP n 1 59 PRO n 1 60 ASN n 1 61 ALA n 1 62 GLU n 1 63 GLU n 1 64 ASP n 1 65 LEU n 1 66 ALA n 1 67 PRO n 1 68 THR n 1 69 ALA n 1 70 THR n 1 71 HIS n 1 72 VAL n 1 73 GLY n 1 74 SER n 1 75 GLU n 1 76 LEU n 1 77 SER n 1 78 GLN n 1 79 GLU n 1 80 ASP n 1 81 LEU n 1 82 ASP n 1 83 ASP n 1 84 ASP n 1 85 GLU n 1 86 ASP n 1 87 GLU n 1 88 ASP n 1 89 GLU n 1 90 GLU n 1 91 ASP n 1 92 GLY n 1 93 ASP n 1 94 ASP n 1 95 ASP n 1 96 SER n 1 97 ALA n 1 98 ASP n 1 99 ASP n 1 100 ASP n 1 101 ASN n 1 102 SER n 1 103 ILE n 1 104 ASP n 1 105 PRO n 1 106 GLU n 1 107 LEU n 1 108 ALA n 1 109 ARG n 1 110 GLU n 1 111 LYS n 1 112 PHE n 1 113 ALA n 1 114 GLU n 1 115 LEU n 1 116 ARG n 1 117 ALA n 1 118 GLN n 1 119 TYR n 1 120 VAL n 1 121 VAL n 1 122 THR n 1 123 ARG n 1 124 ASP n 1 125 THR n 1 126 ILE n 1 127 LYS n 1 128 ALA n 1 129 LYS n 1 130 GLY n 1 131 ARG n 1 132 SER n 1 133 HIS n 1 134 ALA n 1 135 THR n 1 136 ALA n 1 137 GLN n 1 138 GLU n 1 139 GLU n 1 140 ILE n 1 141 LEU n 1 142 LYS n 1 143 LEU n 1 144 SER n 1 145 GLU n 1 146 VAL n 1 147 PHE n 1 148 LYS n 1 149 GLN n 1 150 PHE n 1 151 ARG n 1 152 LEU n 1 153 VAL n 1 154 PRO n 1 155 LYS n 1 156 GLN n 1 157 PHE n 1 158 ASP n 1 159 TYR n 1 160 LEU n 1 161 VAL n 1 162 ASN n 1 163 SER n 1 164 MET n 1 165 ARG n 1 166 VAL n 1 167 MET n 1 168 MET n 1 169 ASP n 1 170 ARG n 1 171 VAL n 1 172 ARG n 1 173 THR n 1 174 GLN n 1 175 GLU n 1 176 ARG n 1 177 LEU n 1 178 ILE n 1 179 MET n 1 180 LYS n 1 181 LEU n 1 182 CYS n 1 183 VAL n 1 184 GLU n 1 185 GLN n 1 186 CYS n 1 187 LYS n 1 188 MET n 1 189 PRO n 1 190 LYS n 1 191 LYS n 1 192 ASN n 1 193 PHE n 1 194 ILE n 1 195 THR n 1 196 LEU n 1 197 PHE n 1 198 THR n 1 199 GLY n 1 200 ASN n 1 201 GLU n 1 202 THR n 1 203 SER n 1 204 ASP n 1 205 THR n 1 206 TRP n 1 207 PHE n 1 208 ASN n 1 209 ALA n 1 210 ALA n 1 211 ILE n 1 212 ALA n 1 213 MET n 1 214 ASN n 1 215 LYS n 1 216 PRO n 1 217 TRP n 1 218 SER n 1 219 GLU n 1 220 LYS n 1 221 LEU n 1 222 HIS n 1 223 ASP n 1 224 VAL n 1 225 SER n 1 226 GLU n 1 227 GLU n 1 228 VAL n 1 229 HIS n 1 230 ARG n 1 231 ALA n 1 232 LEU n 1 233 GLN n 1 234 LYS n 1 235 LEU n 1 236 GLN n 1 237 GLN n 1 238 ILE n 1 239 GLU n 1 240 GLU n 1 241 GLU n 1 242 THR n 1 243 GLY n 1 244 LEU n 1 245 THR n 1 246 ILE n 1 247 GLU n 1 248 GLN n 1 249 VAL n 1 250 LYS n 1 251 ASP n 1 252 ILE n 1 253 ASN n 1 254 ARG n 1 255 ARG n 1 256 MET n 1 257 SER n 1 258 ILE n 1 259 GLY n 1 260 GLU n 1 261 ALA n 1 262 LYS n 1 263 ALA n 1 264 ARG n 1 265 ARG n 1 266 ALA n 1 267 LYS n 1 268 LYS n 1 269 GLU n 1 270 MET n 1 271 VAL n 1 272 GLU n 1 273 ALA n 1 274 ASN n 1 275 LEU n 1 276 ARG n 1 277 LEU n 1 278 VAL n 1 279 ILE n 1 280 SER n 1 281 ILE n 1 282 ALA n 1 283 LYS n 1 284 LYS n 1 285 TYR n 1 286 THR n 1 287 ASN n 1 288 ARG n 1 289 GLY n 1 290 LEU n 1 291 GLN n 1 292 PHE n 1 293 LEU n 1 294 ASP n 1 295 LEU n 1 296 ILE n 1 297 GLN n 1 298 GLU n 1 299 GLY n 1 300 ASN n 1 301 ILE n 1 302 GLY n 1 303 LEU n 1 304 MET n 1 305 LYS n 1 306 ALA n 1 307 VAL n 1 308 ASP n 1 309 LYS n 1 310 PHE n 1 311 GLU n 1 312 TYR n 1 313 ARG n 1 314 ARG n 1 315 GLY n 1 316 TYR n 1 317 LYS n 1 318 PHE n 1 319 SER n 1 320 THR n 1 321 TYR n 1 322 ALA n 1 323 THR n 1 324 TRP n 1 325 TRP n 1 326 ILE n 1 327 ARG n 1 328 GLN n 1 329 ALA n 1 330 ILE n 1 331 THR n 1 332 ARG n 1 333 SER n 1 334 ILE n 1 335 ALA n 1 336 ASP n 1 337 GLN n 1 338 ALA n 1 339 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene RPOD _entity_src_gen.gene_src_species 'Escherichia coli' _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line BL21 _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location CYTOPLASM _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene RPOD _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location CYTOPLASM _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET15B (NOVAGEN)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RPOD_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00579 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAA AQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGR SHATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAI AMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQ FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLR MRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SIG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 339 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00579 _struct_ref_seq.db_align_beg 114 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 448 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 114 _struct_ref_seq.pdbx_auth_seq_align_end 448 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1SIG _struct_ref_seq_dif.mon_id ASN _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 40 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00579 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 149 _struct_ref_seq_dif.details CONFLICT _struct_ref_seq_dif.pdbx_auth_seq_num 149 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1SIG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.7 _exptl_crystal.density_percent_sol 53. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.1 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN CRYSTALLIZED FROM 50 MM SODIUM ACETATE, 0.5-0.7 M LI2SO4, 5-7% (W/V) PEG 8000, 5 MM DTT, PH 5.1; TRANSFERRED IN EIGHT STEPS TO 50 MM SODIUM ACETATE, 0.5 M LI2SO4, 15% (W/V) PEG 8000, 17.5% GLYCEROL AND 10MM DTT, PH 5.1 ; # _diffrn.id 1 _diffrn.ambient_temp 103 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type FUJI _diffrn_detector.pdbx_collection_date 1995-08-25 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9663 1.0 2 0.9879 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength 0.9663 _diffrn_source.pdbx_wavelength_list '0.9663, 0.9879' # _reflns.entry_id 1SIG _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.0 _reflns.d_resolution_high 2.6 _reflns.number_obs 13160 _reflns.number_all ? _reflns.percent_possible_obs 94.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0630000 _reflns.pdbx_netI_over_sigmaI 15.1 _reflns.B_iso_Wilson_estimate 48.8 _reflns.pdbx_redundancy 5.84 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.66 _reflns_shell.percent_possible_all 78.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.2700000 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.63 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1SIG _refine.ls_number_reflns_obs 11376 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 100000.00 _refine.pdbx_data_cutoff_low_absF 0.1 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs 90.9 _refine.ls_R_factor_obs 0.2180000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2180000 _refine.ls_R_factor_R_free 0.3150000 _refine.ls_R_factor_R_free_error 0.0092 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.28 _refine.ls_number_reflns_R_free 1170 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 49.8 _refine.aniso_B[1][1] -5.1484 _refine.aniso_B[2][2] -5.1484 _refine.aniso_B[3][3] 10.2967 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MULTIWAVELENGTH ANOMALOUS DISPERSION' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1SIG _refine_analyze.Luzzati_coordinate_error_obs 0.33 _refine_analyze.Luzzati_sigma_a_obs 0.45 _refine_analyze.Luzzati_d_res_low_obs 6.00 _refine_analyze.Luzzati_coordinate_error_free 0.49 _refine_analyze.Luzzati_sigma_a_free 0.54 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2482 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 2593 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 21.6 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.46 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 3.41 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 5.33 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 5.31 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 7.95 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.71 _refine_ls_shell.number_reflns_R_work 1094 _refine_ls_shell.R_factor_R_work 0.3569000 _refine_ls_shell.percent_reflns_obs 80.04 _refine_ls_shell.R_factor_R_free 0.3707000 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 10.84 _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL ? 'X-RAY DIFFRACTION' # _struct.entry_id 1SIG _struct.title 'CRYSTAL STRUCTURE OF A SIGMA70 SUBUNIT FRAGMENT FROM ESCHERICHIA COLI RNA POLYMERASE' _struct.pdbx_descriptor 'RNA POLYMERASE PRIMARY SIGMA FACTOR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SIG _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATION' _struct_keywords.text 'RNA POLYMERASE SIGMA FACTOR, TRANSCRIPTION REGULATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 7 ? GLU A 27 ? GLU A 116 GLU A 136 1 ? 21 HELX_P HELX_P2 2 PRO A 29 ? TYR A 39 ? PRO A 138 TYR A 148 1 ? 11 HELX_P HELX_P3 3 LEU A 49 ? ASP A 51 ? LEU A 158 ASP A 160 5 ? 3 HELX_P HELX_P4 4 PRO A 105 ? THR A 125 ? PRO A 214 THR A 234 1 ? 21 HELX_P HELX_P5 5 ALA A 134 ? GLN A 149 ? ALA A 243 GLN A 258 1 ? 16 HELX_P HELX_P6 6 PRO A 154 ? VAL A 183 ? PRO A 263 VAL A 292 1 ? 30 HELX_P HELX_P7 7 LYS A 190 ? PHE A 197 ? LYS A 299 PHE A 306 1 ? 8 HELX_P HELX_P8 8 ASP A 204 ? TRP A 206 ? ASP A 313 TRP A 315 5 ? 3 HELX_P HELX_P9 9 ASN A 208 ? MET A 213 ? ASN A 317 MET A 322 1 ? 6 HELX_P HELX_P10 10 PRO A 216 ? HIS A 222 ? PRO A 325 HIS A 331 1 ? 7 HELX_P HELX_P11 11 SER A 225 ? THR A 242 ? SER A 334 THR A 351 1 ? 18 HELX_P HELX_P12 12 ILE A 246 ? LYS A 284 ? ILE A 355 LYS A 393 1 ? 39 HELX_P HELX_P13 13 PHE A 292 ? LYS A 309 ? PHE A 401 LYS A 418 1 ? 18 HELX_P HELX_P14 14 PHE A 318 ? ALA A 335 ? PHE A 427 ALA A 444 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 53 ? PHE A 56 ? ILE A 162 PHE A 165 A 2 PHE A 150 ? LEU A 152 ? PHE A 259 LEU A 261 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 54 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 163 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ARG _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 151 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ARG _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 260 # _database_PDB_matrix.entry_id 1SIG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1SIG _atom_sites.fract_transf_matrix[1][1] 0.012622 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012622 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007459 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 110 ? ? ? A . n A 1 2 SER 2 111 ? ? ? A . n A 1 3 HIS 3 112 ? ? ? A . n A 1 4 MET 4 113 113 MET MET A . n A 1 5 GLU 5 114 114 GLU GLU A . n A 1 6 GLY 6 115 115 GLY GLY A . n A 1 7 GLU 7 116 116 GLU GLU A . n A 1 8 ILE 8 117 117 ILE ILE A . n A 1 9 ASP 9 118 118 ASP ASP A . n A 1 10 ILE 10 119 119 ILE ILE A . n A 1 11 ALA 11 120 120 ALA ALA A . n A 1 12 LYS 12 121 121 LYS LYS A . n A 1 13 ARG 13 122 122 ARG ARG A . n A 1 14 ILE 14 123 123 ILE ILE A . n A 1 15 GLU 15 124 124 GLU GLU A . n A 1 16 ASP 16 125 125 ASP ASP A . n A 1 17 GLY 17 126 126 GLY GLY A . n A 1 18 ILE 18 127 127 ILE ILE A . n A 1 19 ASN 19 128 128 ASN ASN A . n A 1 20 GLN 20 129 129 GLN GLN A . n A 1 21 VAL 21 130 130 VAL VAL A . n A 1 22 GLN 22 131 131 GLN GLN A . n A 1 23 CYS 23 132 132 CYS CYS A . n A 1 24 SER 24 133 133 SER SER A . n A 1 25 VAL 25 134 134 VAL VAL A . n A 1 26 ALA 26 135 135 ALA ALA A . n A 1 27 GLU 27 136 136 GLU GLU A . n A 1 28 TYR 28 137 137 TYR TYR A . n A 1 29 PRO 29 138 138 PRO PRO A . n A 1 30 GLU 30 139 139 GLU GLU A . n A 1 31 ALA 31 140 140 ALA ALA A . n A 1 32 ILE 32 141 141 ILE ILE A . n A 1 33 THR 33 142 142 THR THR A . n A 1 34 TYR 34 143 143 TYR TYR A . n A 1 35 LEU 35 144 144 LEU LEU A . n A 1 36 LEU 36 145 145 LEU LEU A . n A 1 37 GLU 37 146 146 GLU GLU A . n A 1 38 GLN 38 147 147 GLN GLN A . n A 1 39 TYR 39 148 148 TYR TYR A . n A 1 40 ASN 40 149 149 ASN ASN A . n A 1 41 ARG 41 150 150 ARG ARG A . n A 1 42 VAL 42 151 151 VAL VAL A . n A 1 43 GLU 43 152 152 GLU GLU A . n A 1 44 ALA 44 153 153 ALA ALA A . n A 1 45 GLU 45 154 154 GLU GLU A . n A 1 46 GLU 46 155 155 GLU GLU A . n A 1 47 ALA 47 156 156 ALA ALA A . n A 1 48 ARG 48 157 157 ARG ARG A . n A 1 49 LEU 49 158 158 LEU LEU A . n A 1 50 SER 50 159 159 SER SER A . n A 1 51 ASP 51 160 160 ASP ASP A . n A 1 52 LEU 52 161 161 LEU LEU A . n A 1 53 ILE 53 162 162 ILE ILE A . n A 1 54 THR 54 163 163 THR THR A . n A 1 55 GLY 55 164 164 GLY GLY A . n A 1 56 PHE 56 165 165 PHE PHE A . n A 1 57 VAL 57 166 166 VAL VAL A . n A 1 58 ASP 58 167 167 ASP ASP A . n A 1 59 PRO 59 168 ? ? ? A . n A 1 60 ASN 60 169 ? ? ? A . n A 1 61 ALA 61 170 ? ? ? A . n A 1 62 GLU 62 171 ? ? ? A . n A 1 63 GLU 63 172 ? ? ? A . n A 1 64 ASP 64 173 173 ASP ASP A . n A 1 65 LEU 65 174 174 LEU LEU A . n A 1 66 ALA 66 175 175 ALA ALA A . n A 1 67 PRO 67 176 176 PRO PRO A . n A 1 68 THR 68 177 177 THR THR A . n A 1 69 ALA 69 178 178 ALA ALA A . n A 1 70 THR 70 179 179 THR THR A . n A 1 71 HIS 71 180 180 HIS HIS A . n A 1 72 VAL 72 181 181 VAL VAL A . n A 1 73 GLY 73 182 182 GLY GLY A . n A 1 74 SER 74 183 183 SER SER A . n A 1 75 GLU 75 184 184 GLU GLU A . n A 1 76 LEU 76 185 185 LEU LEU A . n A 1 77 SER 77 186 186 SER SER A . n A 1 78 GLN 78 187 187 GLN GLN A . n A 1 79 GLU 79 188 188 GLU GLU A . n A 1 80 ASP 80 189 189 ASP ASP A . n A 1 81 LEU 81 190 190 LEU LEU A . n A 1 82 ASP 82 191 191 ASP ASP A . n A 1 83 ASP 83 192 ? ? ? A . n A 1 84 ASP 84 193 ? ? ? A . n A 1 85 GLU 85 194 ? ? ? A . n A 1 86 ASP 86 195 ? ? ? A . n A 1 87 GLU 87 196 ? ? ? A . n A 1 88 ASP 88 197 ? ? ? A . n A 1 89 GLU 89 198 ? ? ? A . n A 1 90 GLU 90 199 ? ? ? A . n A 1 91 ASP 91 200 ? ? ? A . n A 1 92 GLY 92 201 ? ? ? A . n A 1 93 ASP 93 202 ? ? ? A . n A 1 94 ASP 94 203 ? ? ? A . n A 1 95 ASP 95 204 ? ? ? A . n A 1 96 SER 96 205 ? ? ? A . n A 1 97 ALA 97 206 ? ? ? A . n A 1 98 ASP 98 207 ? ? ? A . n A 1 99 ASP 99 208 ? ? ? A . n A 1 100 ASP 100 209 ? ? ? A . n A 1 101 ASN 101 210 ? ? ? A . n A 1 102 SER 102 211 ? ? ? A . n A 1 103 ILE 103 212 212 ILE ILE A . n A 1 104 ASP 104 213 213 ASP ASP A . n A 1 105 PRO 105 214 214 PRO PRO A . n A 1 106 GLU 106 215 215 GLU GLU A . n A 1 107 LEU 107 216 216 LEU LEU A . n A 1 108 ALA 108 217 217 ALA ALA A . n A 1 109 ARG 109 218 218 ARG ARG A . n A 1 110 GLU 110 219 219 GLU GLU A . n A 1 111 LYS 111 220 220 LYS LYS A . n A 1 112 PHE 112 221 221 PHE PHE A . n A 1 113 ALA 113 222 222 ALA ALA A . n A 1 114 GLU 114 223 223 GLU GLU A . n A 1 115 LEU 115 224 224 LEU LEU A . n A 1 116 ARG 116 225 225 ARG ARG A . n A 1 117 ALA 117 226 226 ALA ALA A . n A 1 118 GLN 118 227 227 GLN GLN A . n A 1 119 TYR 119 228 228 TYR TYR A . n A 1 120 VAL 120 229 229 VAL VAL A . n A 1 121 VAL 121 230 230 VAL VAL A . n A 1 122 THR 122 231 231 THR THR A . n A 1 123 ARG 123 232 232 ARG ARG A . n A 1 124 ASP 124 233 233 ASP ASP A . n A 1 125 THR 125 234 234 THR THR A . n A 1 126 ILE 126 235 235 ILE ILE A . n A 1 127 LYS 127 236 236 LYS LYS A . n A 1 128 ALA 128 237 237 ALA ALA A . n A 1 129 LYS 129 238 ? ? ? A . n A 1 130 GLY 130 239 ? ? ? A . n A 1 131 ARG 131 240 ? ? ? A . n A 1 132 SER 132 241 ? ? ? A . n A 1 133 HIS 133 242 242 HIS HIS A . n A 1 134 ALA 134 243 243 ALA ALA A . n A 1 135 THR 135 244 244 THR THR A . n A 1 136 ALA 136 245 245 ALA ALA A . n A 1 137 GLN 137 246 246 GLN GLN A . n A 1 138 GLU 138 247 247 GLU GLU A . n A 1 139 GLU 139 248 248 GLU GLU A . n A 1 140 ILE 140 249 249 ILE ILE A . n A 1 141 LEU 141 250 250 LEU LEU A . n A 1 142 LYS 142 251 251 LYS LYS A . n A 1 143 LEU 143 252 252 LEU LEU A . n A 1 144 SER 144 253 253 SER SER A . n A 1 145 GLU 145 254 254 GLU GLU A . n A 1 146 VAL 146 255 255 VAL VAL A . n A 1 147 PHE 147 256 256 PHE PHE A . n A 1 148 LYS 148 257 257 LYS LYS A . n A 1 149 GLN 149 258 258 GLN GLN A . n A 1 150 PHE 150 259 259 PHE PHE A . n A 1 151 ARG 151 260 260 ARG ARG A . n A 1 152 LEU 152 261 261 LEU LEU A . n A 1 153 VAL 153 262 262 VAL VAL A . n A 1 154 PRO 154 263 263 PRO PRO A . n A 1 155 LYS 155 264 264 LYS LYS A . n A 1 156 GLN 156 265 265 GLN GLN A . n A 1 157 PHE 157 266 266 PHE PHE A . n A 1 158 ASP 158 267 267 ASP ASP A . n A 1 159 TYR 159 268 268 TYR TYR A . n A 1 160 LEU 160 269 269 LEU LEU A . n A 1 161 VAL 161 270 270 VAL VAL A . n A 1 162 ASN 162 271 271 ASN ASN A . n A 1 163 SER 163 272 272 SER SER A . n A 1 164 MET 164 273 273 MET MET A . n A 1 165 ARG 165 274 274 ARG ARG A . n A 1 166 VAL 166 275 275 VAL VAL A . n A 1 167 MET 167 276 276 MET MET A . n A 1 168 MET 168 277 277 MET MET A . n A 1 169 ASP 169 278 278 ASP ASP A . n A 1 170 ARG 170 279 279 ARG ARG A . n A 1 171 VAL 171 280 280 VAL VAL A . n A 1 172 ARG 172 281 281 ARG ARG A . n A 1 173 THR 173 282 282 THR THR A . n A 1 174 GLN 174 283 283 GLN GLN A . n A 1 175 GLU 175 284 284 GLU GLU A . n A 1 176 ARG 176 285 285 ARG ARG A . n A 1 177 LEU 177 286 286 LEU LEU A . n A 1 178 ILE 178 287 287 ILE ILE A . n A 1 179 MET 179 288 288 MET MET A . n A 1 180 LYS 180 289 289 LYS LYS A . n A 1 181 LEU 181 290 290 LEU LEU A . n A 1 182 CYS 182 291 291 CYS CYS A . n A 1 183 VAL 183 292 292 VAL VAL A . n A 1 184 GLU 184 293 293 GLU GLU A . n A 1 185 GLN 185 294 294 GLN GLN A . n A 1 186 CYS 186 295 295 CYS CYS A . n A 1 187 LYS 187 296 296 LYS LYS A . n A 1 188 MET 188 297 297 MET MET A . n A 1 189 PRO 189 298 298 PRO PRO A . n A 1 190 LYS 190 299 299 LYS LYS A . n A 1 191 LYS 191 300 300 LYS LYS A . n A 1 192 ASN 192 301 301 ASN ASN A . n A 1 193 PHE 193 302 302 PHE PHE A . n A 1 194 ILE 194 303 303 ILE ILE A . n A 1 195 THR 195 304 304 THR THR A . n A 1 196 LEU 196 305 305 LEU LEU A . n A 1 197 PHE 197 306 306 PHE PHE A . n A 1 198 THR 198 307 307 THR THR A . n A 1 199 GLY 199 308 308 GLY GLY A . n A 1 200 ASN 200 309 309 ASN ASN A . n A 1 201 GLU 201 310 310 GLU GLU A . n A 1 202 THR 202 311 311 THR THR A . n A 1 203 SER 203 312 312 SER SER A . n A 1 204 ASP 204 313 313 ASP ASP A . n A 1 205 THR 205 314 314 THR THR A . n A 1 206 TRP 206 315 315 TRP TRP A . n A 1 207 PHE 207 316 316 PHE PHE A . n A 1 208 ASN 208 317 317 ASN ASN A . n A 1 209 ALA 209 318 318 ALA ALA A . n A 1 210 ALA 210 319 319 ALA ALA A . n A 1 211 ILE 211 320 320 ILE ILE A . n A 1 212 ALA 212 321 321 ALA ALA A . n A 1 213 MET 213 322 322 MET MET A . n A 1 214 ASN 214 323 323 ASN ASN A . n A 1 215 LYS 215 324 324 LYS LYS A . n A 1 216 PRO 216 325 325 PRO PRO A . n A 1 217 TRP 217 326 326 TRP TRP A . n A 1 218 SER 218 327 327 SER SER A . n A 1 219 GLU 219 328 328 GLU GLU A . n A 1 220 LYS 220 329 329 LYS LYS A . n A 1 221 LEU 221 330 330 LEU LEU A . n A 1 222 HIS 222 331 331 HIS HIS A . n A 1 223 ASP 223 332 332 ASP ASP A . n A 1 224 VAL 224 333 333 VAL VAL A . n A 1 225 SER 225 334 334 SER SER A . n A 1 226 GLU 226 335 335 GLU GLU A . n A 1 227 GLU 227 336 336 GLU GLU A . n A 1 228 VAL 228 337 337 VAL VAL A . n A 1 229 HIS 229 338 338 HIS HIS A . n A 1 230 ARG 230 339 339 ARG ARG A . n A 1 231 ALA 231 340 340 ALA ALA A . n A 1 232 LEU 232 341 341 LEU LEU A . n A 1 233 GLN 233 342 342 GLN GLN A . n A 1 234 LYS 234 343 343 LYS LYS A . n A 1 235 LEU 235 344 344 LEU LEU A . n A 1 236 GLN 236 345 345 GLN GLN A . n A 1 237 GLN 237 346 346 GLN GLN A . n A 1 238 ILE 238 347 347 ILE ILE A . n A 1 239 GLU 239 348 348 GLU GLU A . n A 1 240 GLU 240 349 349 GLU GLU A . n A 1 241 GLU 241 350 350 GLU GLU A . n A 1 242 THR 242 351 351 THR THR A . n A 1 243 GLY 243 352 352 GLY GLY A . n A 1 244 LEU 244 353 353 LEU LEU A . n A 1 245 THR 245 354 354 THR THR A . n A 1 246 ILE 246 355 355 ILE ILE A . n A 1 247 GLU 247 356 356 GLU GLU A . n A 1 248 GLN 248 357 357 GLN GLN A . n A 1 249 VAL 249 358 358 VAL VAL A . n A 1 250 LYS 250 359 359 LYS LYS A . n A 1 251 ASP 251 360 360 ASP ASP A . n A 1 252 ILE 252 361 361 ILE ILE A . n A 1 253 ASN 253 362 362 ASN ASN A . n A 1 254 ARG 254 363 363 ARG ARG A . n A 1 255 ARG 255 364 364 ARG ARG A . n A 1 256 MET 256 365 365 MET MET A . n A 1 257 SER 257 366 366 SER SER A . n A 1 258 ILE 258 367 367 ILE ILE A . n A 1 259 GLY 259 368 368 GLY GLY A . n A 1 260 GLU 260 369 369 GLU GLU A . n A 1 261 ALA 261 370 370 ALA ALA A . n A 1 262 LYS 262 371 371 LYS LYS A . n A 1 263 ALA 263 372 372 ALA ALA A . n A 1 264 ARG 264 373 373 ARG ARG A . n A 1 265 ARG 265 374 374 ARG ARG A . n A 1 266 ALA 266 375 375 ALA ALA A . n A 1 267 LYS 267 376 376 LYS LYS A . n A 1 268 LYS 268 377 377 LYS LYS A . n A 1 269 GLU 269 378 378 GLU GLU A . n A 1 270 MET 270 379 379 MET MET A . n A 1 271 VAL 271 380 380 VAL VAL A . n A 1 272 GLU 272 381 381 GLU GLU A . n A 1 273 ALA 273 382 382 ALA ALA A . n A 1 274 ASN 274 383 383 ASN ASN A . n A 1 275 LEU 275 384 384 LEU LEU A . n A 1 276 ARG 276 385 385 ARG ARG A . n A 1 277 LEU 277 386 386 LEU LEU A . n A 1 278 VAL 278 387 387 VAL VAL A . n A 1 279 ILE 279 388 388 ILE ILE A . n A 1 280 SER 280 389 389 SER SER A . n A 1 281 ILE 281 390 390 ILE ILE A . n A 1 282 ALA 282 391 391 ALA ALA A . n A 1 283 LYS 283 392 392 LYS LYS A . n A 1 284 LYS 284 393 393 LYS LYS A . n A 1 285 TYR 285 394 394 TYR TYR A . n A 1 286 THR 286 395 395 THR THR A . n A 1 287 ASN 287 396 396 ASN ASN A . n A 1 288 ARG 288 397 397 ARG ARG A . n A 1 289 GLY 289 398 398 GLY GLY A . n A 1 290 LEU 290 399 399 LEU LEU A . n A 1 291 GLN 291 400 400 GLN GLN A . n A 1 292 PHE 292 401 401 PHE PHE A . n A 1 293 LEU 293 402 402 LEU LEU A . n A 1 294 ASP 294 403 403 ASP ASP A . n A 1 295 LEU 295 404 404 LEU LEU A . n A 1 296 ILE 296 405 405 ILE ILE A . n A 1 297 GLN 297 406 406 GLN GLN A . n A 1 298 GLU 298 407 407 GLU GLU A . n A 1 299 GLY 299 408 408 GLY GLY A . n A 1 300 ASN 300 409 409 ASN ASN A . n A 1 301 ILE 301 410 410 ILE ILE A . n A 1 302 GLY 302 411 411 GLY GLY A . n A 1 303 LEU 303 412 412 LEU LEU A . n A 1 304 MET 304 413 413 MET MET A . n A 1 305 LYS 305 414 414 LYS LYS A . n A 1 306 ALA 306 415 415 ALA ALA A . n A 1 307 VAL 307 416 416 VAL VAL A . n A 1 308 ASP 308 417 417 ASP ASP A . n A 1 309 LYS 309 418 418 LYS LYS A . n A 1 310 PHE 310 419 419 PHE PHE A . n A 1 311 GLU 311 420 420 GLU GLU A . n A 1 312 TYR 312 421 421 TYR TYR A . n A 1 313 ARG 313 422 422 ARG ARG A . n A 1 314 ARG 314 423 423 ARG ARG A . n A 1 315 GLY 315 424 424 GLY GLY A . n A 1 316 TYR 316 425 425 TYR TYR A . n A 1 317 LYS 317 426 426 LYS LYS A . n A 1 318 PHE 318 427 427 PHE PHE A . n A 1 319 SER 319 428 428 SER SER A . n A 1 320 THR 320 429 429 THR THR A . n A 1 321 TYR 321 430 430 TYR TYR A . n A 1 322 ALA 322 431 431 ALA ALA A . n A 1 323 THR 323 432 432 THR THR A . n A 1 324 TRP 324 433 433 TRP TRP A . n A 1 325 TRP 325 434 434 TRP TRP A . n A 1 326 ILE 326 435 435 ILE ILE A . n A 1 327 ARG 327 436 436 ARG ARG A . n A 1 328 GLN 328 437 437 GLN GLN A . n A 1 329 ALA 329 438 438 ALA ALA A . n A 1 330 ILE 330 439 439 ILE ILE A . n A 1 331 THR 331 440 440 THR THR A . n A 1 332 ARG 332 441 441 ARG ARG A . n A 1 333 SER 333 442 442 SER SER A . n A 1 334 ILE 334 443 443 ILE ILE A . n A 1 335 ALA 335 444 444 ALA ALA A . n A 1 336 ASP 336 445 445 ASP ASP A . n A 1 337 GLN 337 446 446 GLN GLN A . n A 1 338 ALA 338 447 ? ? ? A . n A 1 339 ARG 339 448 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-05-15 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 X-PLOR refinement 3.1 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H2 A HOH 504 ? ? H1 A HOH 598 ? ? 1.25 2 1 HH11 A ARG 436 ? ? H2 A HOH 504 ? ? 1.28 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 154 ? ? 38.59 77.15 2 1 VAL A 229 ? ? -54.24 -8.60 3 1 THR A 307 ? ? -46.02 -1.83 4 1 THR A 314 ? ? -38.87 -34.95 5 1 ALA A 321 ? ? -69.15 3.44 6 1 ASN A 323 ? ? 39.35 36.16 7 1 THR A 395 ? ? -51.50 -77.50 8 1 ASN A 396 ? ? -95.63 36.96 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 110 ? A GLY 1 2 1 Y 1 A SER 111 ? A SER 2 3 1 Y 1 A HIS 112 ? A HIS 3 4 1 Y 1 A PRO 168 ? A PRO 59 5 1 Y 1 A ASN 169 ? A ASN 60 6 1 Y 1 A ALA 170 ? A ALA 61 7 1 Y 1 A GLU 171 ? A GLU 62 8 1 Y 1 A GLU 172 ? A GLU 63 9 1 Y 1 A ASP 192 ? A ASP 83 10 1 Y 1 A ASP 193 ? A ASP 84 11 1 Y 1 A GLU 194 ? A GLU 85 12 1 Y 1 A ASP 195 ? A ASP 86 13 1 Y 1 A GLU 196 ? A GLU 87 14 1 Y 1 A ASP 197 ? A ASP 88 15 1 Y 1 A GLU 198 ? A GLU 89 16 1 Y 1 A GLU 199 ? A GLU 90 17 1 Y 1 A ASP 200 ? A ASP 91 18 1 Y 1 A GLY 201 ? A GLY 92 19 1 Y 1 A ASP 202 ? A ASP 93 20 1 Y 1 A ASP 203 ? A ASP 94 21 1 Y 1 A ASP 204 ? A ASP 95 22 1 Y 1 A SER 205 ? A SER 96 23 1 Y 1 A ALA 206 ? A ALA 97 24 1 Y 1 A ASP 207 ? A ASP 98 25 1 Y 1 A ASP 208 ? A ASP 99 26 1 Y 1 A ASP 209 ? A ASP 100 27 1 Y 1 A ASN 210 ? A ASN 101 28 1 Y 1 A SER 211 ? A SER 102 29 1 Y 1 A LYS 238 ? A LYS 129 30 1 Y 1 A GLY 239 ? A GLY 130 31 1 Y 1 A ARG 240 ? A ARG 131 32 1 Y 1 A SER 241 ? A SER 132 33 1 Y 1 A ALA 447 ? A ALA 338 34 1 Y 1 A ARG 448 ? A ARG 339 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 500 500 HOH HOH A . B 2 HOH 2 501 501 HOH HOH A . B 2 HOH 3 502 502 HOH HOH A . B 2 HOH 4 503 503 HOH HOH A . B 2 HOH 5 504 504 HOH HOH A . B 2 HOH 6 505 505 HOH HOH A . B 2 HOH 7 506 506 HOH HOH A . B 2 HOH 8 507 507 HOH HOH A . B 2 HOH 9 508 508 HOH HOH A . B 2 HOH 10 509 509 HOH HOH A . B 2 HOH 11 510 510 HOH HOH A . B 2 HOH 12 511 511 HOH HOH A . B 2 HOH 13 512 512 HOH HOH A . B 2 HOH 14 513 513 HOH HOH A . B 2 HOH 15 514 514 HOH HOH A . B 2 HOH 16 515 515 HOH HOH A . B 2 HOH 17 516 516 HOH HOH A . B 2 HOH 18 517 517 HOH HOH A . B 2 HOH 19 518 518 HOH HOH A . B 2 HOH 20 519 519 HOH HOH A . B 2 HOH 21 520 520 HOH HOH A . B 2 HOH 22 521 521 HOH HOH A . B 2 HOH 23 522 522 HOH HOH A . B 2 HOH 24 523 523 HOH HOH A . B 2 HOH 25 524 524 HOH HOH A . B 2 HOH 26 525 525 HOH HOH A . B 2 HOH 27 526 526 HOH HOH A . B 2 HOH 28 527 527 HOH HOH A . B 2 HOH 29 528 528 HOH HOH A . B 2 HOH 30 529 529 HOH HOH A . B 2 HOH 31 530 530 HOH HOH A . B 2 HOH 32 531 531 HOH HOH A . B 2 HOH 33 532 532 HOH HOH A . B 2 HOH 34 533 533 HOH HOH A . B 2 HOH 35 534 534 HOH HOH A . B 2 HOH 36 535 535 HOH HOH A . B 2 HOH 37 536 536 HOH HOH A . B 2 HOH 38 537 537 HOH HOH A . B 2 HOH 39 538 538 HOH HOH A . B 2 HOH 40 539 539 HOH HOH A . B 2 HOH 41 540 540 HOH HOH A . B 2 HOH 42 541 541 HOH HOH A . B 2 HOH 43 542 542 HOH HOH A . B 2 HOH 44 543 543 HOH HOH A . B 2 HOH 45 544 544 HOH HOH A . B 2 HOH 46 545 545 HOH HOH A . B 2 HOH 47 546 546 HOH HOH A . B 2 HOH 48 547 547 HOH HOH A . B 2 HOH 49 548 548 HOH HOH A . B 2 HOH 50 549 549 HOH HOH A . B 2 HOH 51 550 550 HOH HOH A . B 2 HOH 52 551 551 HOH HOH A . B 2 HOH 53 552 552 HOH HOH A . B 2 HOH 54 553 553 HOH HOH A . B 2 HOH 55 554 554 HOH HOH A . B 2 HOH 56 555 555 HOH HOH A . B 2 HOH 57 556 556 HOH HOH A . B 2 HOH 58 557 557 HOH HOH A . B 2 HOH 59 558 558 HOH HOH A . B 2 HOH 60 559 559 HOH HOH A . B 2 HOH 61 560 560 HOH HOH A . B 2 HOH 62 561 561 HOH HOH A . B 2 HOH 63 562 562 HOH HOH A . B 2 HOH 64 563 563 HOH HOH A . B 2 HOH 65 564 564 HOH HOH A . B 2 HOH 66 565 565 HOH HOH A . B 2 HOH 67 566 566 HOH HOH A . B 2 HOH 68 567 567 HOH HOH A . B 2 HOH 69 568 568 HOH HOH A . B 2 HOH 70 569 569 HOH HOH A . B 2 HOH 71 570 570 HOH HOH A . B 2 HOH 72 571 571 HOH HOH A . B 2 HOH 73 572 572 HOH HOH A . B 2 HOH 74 573 573 HOH HOH A . B 2 HOH 75 574 574 HOH HOH A . B 2 HOH 76 575 575 HOH HOH A . B 2 HOH 77 576 576 HOH HOH A . B 2 HOH 78 577 577 HOH HOH A . B 2 HOH 79 578 578 HOH HOH A . B 2 HOH 80 579 579 HOH HOH A . B 2 HOH 81 580 580 HOH HOH A . B 2 HOH 82 581 581 HOH HOH A . B 2 HOH 83 582 582 HOH HOH A . B 2 HOH 84 583 583 HOH HOH A . B 2 HOH 85 584 584 HOH HOH A . B 2 HOH 86 585 585 HOH HOH A . B 2 HOH 87 586 586 HOH HOH A . B 2 HOH 88 587 587 HOH HOH A . B 2 HOH 89 588 588 HOH HOH A . B 2 HOH 90 589 589 HOH HOH A . B 2 HOH 91 590 590 HOH HOH A . B 2 HOH 92 591 591 HOH HOH A . B 2 HOH 93 592 592 HOH HOH A . B 2 HOH 94 593 593 HOH HOH A . B 2 HOH 95 594 594 HOH HOH A . B 2 HOH 96 595 595 HOH HOH A . B 2 HOH 97 596 596 HOH HOH A . B 2 HOH 98 597 597 HOH HOH A . B 2 HOH 99 598 598 HOH HOH A . B 2 HOH 100 599 599 HOH HOH A . B 2 HOH 101 600 600 HOH HOH A . B 2 HOH 102 601 601 HOH HOH A . B 2 HOH 103 602 602 HOH HOH A . B 2 HOH 104 603 603 HOH HOH A . B 2 HOH 105 604 604 HOH HOH A . B 2 HOH 106 605 605 HOH HOH A . B 2 HOH 107 606 606 HOH HOH A . B 2 HOH 108 607 607 HOH HOH A . B 2 HOH 109 608 608 HOH HOH A . B 2 HOH 110 609 609 HOH HOH A . B 2 HOH 111 610 610 HOH HOH A . #