data_1SLJ # _entry.id 1SLJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SLJ pdb_00001slj 10.2210/pdb1slj/pdb RCSB RCSB021813 ? ? WWPDB D_1000021813 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1smx 'Crystal structure of the S1 domain of RNase E from E. coli (native)' unspecified PDB 1sn8 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SLJ _pdbx_database_status.recvd_initial_deposition_date 2004-03-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schubert, M.' 1 'Edge, R.E.' 2 'Lario, P.' 3 'Cook, M.A.' 4 'Strynadka, N.C.J.' 5 'Mackie, G.A.' 6 'McIntosh, L.P.' 7 # _citation.id primary _citation.title 'Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 341 _citation.page_first 37 _citation.page_last 54 _citation.year 2004 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15312761 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.05.061 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schubert, M.' 1 ? primary 'Edge, R.E.' 2 ? primary 'Lario, P.' 3 ? primary 'Cook, M.A.' 4 ? primary 'Strynadka, N.C.' 5 ? primary 'Mackie, G.A.' 6 ? primary 'McIntosh, L.P.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ribonuclease E' _entity.formula_weight 10704.134 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.1.4.- _entity.pdbx_mutation ? _entity.pdbx_fragment 'S1 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNase E' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMLEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEER GNKGAALTTFISLAGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMLEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEER GNKGAALTTFISLAGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 LEU n 1 6 GLU n 1 7 GLN n 1 8 LYS n 1 9 LYS n 1 10 ALA n 1 11 ASN n 1 12 ILE n 1 13 TYR n 1 14 LYS n 1 15 GLY n 1 16 LYS n 1 17 ILE n 1 18 THR n 1 19 ARG n 1 20 ILE n 1 21 GLU n 1 22 PRO n 1 23 SER n 1 24 LEU n 1 25 GLU n 1 26 ALA n 1 27 ALA n 1 28 PHE n 1 29 VAL n 1 30 ASP n 1 31 TYR n 1 32 GLY n 1 33 ALA n 1 34 GLU n 1 35 ARG n 1 36 HIS n 1 37 GLY n 1 38 PHE n 1 39 LEU n 1 40 PRO n 1 41 LEU n 1 42 LYS n 1 43 GLU n 1 44 ILE n 1 45 ALA n 1 46 ARG n 1 47 GLU n 1 48 TYR n 1 49 PHE n 1 50 PRO n 1 51 ALA n 1 52 ASN n 1 53 TYR n 1 54 SER n 1 55 ALA n 1 56 HIS n 1 57 GLY n 1 58 ARG n 1 59 PRO n 1 60 ASN n 1 61 ILE n 1 62 LYS n 1 63 ASP n 1 64 VAL n 1 65 LEU n 1 66 ARG n 1 67 GLU n 1 68 GLY n 1 69 GLN n 1 70 GLU n 1 71 VAL n 1 72 ILE n 1 73 VAL n 1 74 GLN n 1 75 ILE n 1 76 ASP n 1 77 LYS n 1 78 GLU n 1 79 GLU n 1 80 ARG n 1 81 GLY n 1 82 ASN n 1 83 LYS n 1 84 GLY n 1 85 ALA n 1 86 ALA n 1 87 LEU n 1 88 THR n 1 89 THR n 1 90 PHE n 1 91 ILE n 1 92 SER n 1 93 LEU n 1 94 ALA n 1 95 GLY n 1 96 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene 'RNE, AMS, HMP1, B1084' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNE_ECOLI _struct_ref.pdbx_db_accession P21513 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGA ALTTFISLAGS ; _struct_ref.pdbx_align_begin 35 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SLJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 96 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21513 _struct_ref_seq.db_align_beg 35 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 125 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 35 _struct_ref_seq.pdbx_auth_seq_align_end 125 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1SLJ GLY A 1 ? UNP P21513 ? ? 'cloning artifact' 30 1 1 1SLJ SER A 2 ? UNP P21513 ? ? 'cloning artifact' 31 2 1 1SLJ HIS A 3 ? UNP P21513 ? ? 'cloning artifact' 32 3 1 1SLJ MET A 4 ? UNP P21513 ? ? 'cloning artifact' 33 4 1 1SLJ LEU A 5 ? UNP P21513 ? ? 'cloning artifact' 34 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY 3 1 1 3D_13C_15N/13C-separated_NOESY 4 1 1 3D_13C-separated_NOESY_aromatic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 75mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.5mM RNase E S1 U-15N,13C; 20mM phosphate buffer; 50mM NaCl; 92% H2O, 8% D2O' _pdbx_nmr_sample_details.solvent_system '92% H2O, 8% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian INOVA 600 2 ? Varian UNITY 500 # _pdbx_nmr_refine.entry_id 1SLJ _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;The structures are based on a total of 2884 restraints, including 2113 unambiguous and 597 ambiguous NOE-derived distance constraints, 159 dihedral angle restraints, 15 distance restraints from hydrogen bonds. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1SLJ _pdbx_nmr_details.text 'A mixing time of 100ms was used.' # _pdbx_nmr_ensemble.entry_id 1SLJ _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1SLJ _pdbx_nmr_representative.conformer_id 4 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal NMRPipe ? processing Delaglio 1 Sparky ? 'data analysis' Goddard 2 ARIA/CNS ? refinement Linge 3 # _exptl.entry_id 1SLJ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.density_Matthews ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1SLJ _struct.title 'Solution structure of the S1 domain of RNase E from E. coli' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SLJ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'OB-fold, RNA-binding, HYDROLASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 42 ? ILE A 44 ? LYS A 71 ILE A 73 5 ? 3 HELX_P HELX_P2 2 ASN A 60 ? VAL A 64 ? ASN A 89 VAL A 93 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 70 ? VAL A 73 ? GLU A 99 VAL A 102 A 2 TYR A 13 ? ILE A 20 ? TYR A 42 ILE A 49 A 3 ALA A 26 ? ASP A 30 ? ALA A 55 ASP A 59 A 4 GLY A 37 ? PRO A 40 ? GLY A 66 PRO A 69 A 5 ALA A 85 ? LEU A 87 ? ALA A 114 LEU A 116 A 6 ILE A 75 ? LYS A 77 ? ILE A 104 LYS A 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 73 ? O VAL A 102 N TYR A 13 ? N TYR A 42 A 2 3 N THR A 18 ? N THR A 47 O PHE A 28 ? O PHE A 57 A 3 4 N ALA A 27 ? N ALA A 56 O LEU A 39 ? O LEU A 68 A 4 5 N PHE A 38 ? N PHE A 67 O ALA A 85 ? O ALA A 114 A 5 6 O ALA A 86 ? O ALA A 115 N LYS A 77 ? N LYS A 106 # _database_PDB_matrix.entry_id 1SLJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1SLJ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 30 30 GLY GLY A . n A 1 2 SER 2 31 31 SER SER A . n A 1 3 HIS 3 32 32 HIS HIS A . n A 1 4 MET 4 33 33 MET MET A . n A 1 5 LEU 5 34 34 LEU LEU A . n A 1 6 GLU 6 35 35 GLU GLU A . n A 1 7 GLN 7 36 36 GLN GLN A . n A 1 8 LYS 8 37 37 LYS LYS A . n A 1 9 LYS 9 38 38 LYS LYS A . n A 1 10 ALA 10 39 39 ALA ALA A . n A 1 11 ASN 11 40 40 ASN ASN A . n A 1 12 ILE 12 41 41 ILE ILE A . n A 1 13 TYR 13 42 42 TYR TYR A . n A 1 14 LYS 14 43 43 LYS LYS A . n A 1 15 GLY 15 44 44 GLY GLY A . n A 1 16 LYS 16 45 45 LYS LYS A . n A 1 17 ILE 17 46 46 ILE ILE A . n A 1 18 THR 18 47 47 THR THR A . n A 1 19 ARG 19 48 48 ARG ARG A . n A 1 20 ILE 20 49 49 ILE ILE A . n A 1 21 GLU 21 50 50 GLU GLU A . n A 1 22 PRO 22 51 51 PRO PRO A . n A 1 23 SER 23 52 52 SER SER A . n A 1 24 LEU 24 53 53 LEU LEU A . n A 1 25 GLU 25 54 54 GLU GLU A . n A 1 26 ALA 26 55 55 ALA ALA A . n A 1 27 ALA 27 56 56 ALA ALA A . n A 1 28 PHE 28 57 57 PHE PHE A . n A 1 29 VAL 29 58 58 VAL VAL A . n A 1 30 ASP 30 59 59 ASP ASP A . n A 1 31 TYR 31 60 60 TYR TYR A . n A 1 32 GLY 32 61 61 GLY GLY A . n A 1 33 ALA 33 62 62 ALA ALA A . n A 1 34 GLU 34 63 63 GLU GLU A . n A 1 35 ARG 35 64 64 ARG ARG A . n A 1 36 HIS 36 65 65 HIS HIS A . n A 1 37 GLY 37 66 66 GLY GLY A . n A 1 38 PHE 38 67 67 PHE PHE A . n A 1 39 LEU 39 68 68 LEU LEU A . n A 1 40 PRO 40 69 69 PRO PRO A . n A 1 41 LEU 41 70 70 LEU LEU A . n A 1 42 LYS 42 71 71 LYS LYS A . n A 1 43 GLU 43 72 72 GLU GLU A . n A 1 44 ILE 44 73 73 ILE ILE A . n A 1 45 ALA 45 74 74 ALA ALA A . n A 1 46 ARG 46 75 75 ARG ARG A . n A 1 47 GLU 47 76 76 GLU GLU A . n A 1 48 TYR 48 77 77 TYR TYR A . n A 1 49 PHE 49 78 78 PHE PHE A . n A 1 50 PRO 50 79 79 PRO PRO A . n A 1 51 ALA 51 80 80 ALA ALA A . n A 1 52 ASN 52 81 81 ASN ASN A . n A 1 53 TYR 53 82 82 TYR TYR A . n A 1 54 SER 54 83 83 SER SER A . n A 1 55 ALA 55 84 84 ALA ALA A . n A 1 56 HIS 56 85 85 HIS HIS A . n A 1 57 GLY 57 86 86 GLY GLY A . n A 1 58 ARG 58 87 87 ARG ARG A . n A 1 59 PRO 59 88 88 PRO PRO A . n A 1 60 ASN 60 89 89 ASN ASN A . n A 1 61 ILE 61 90 90 ILE ILE A . n A 1 62 LYS 62 91 91 LYS LYS A . n A 1 63 ASP 63 92 92 ASP ASP A . n A 1 64 VAL 64 93 93 VAL VAL A . n A 1 65 LEU 65 94 94 LEU LEU A . n A 1 66 ARG 66 95 95 ARG ARG A . n A 1 67 GLU 67 96 96 GLU GLU A . n A 1 68 GLY 68 97 97 GLY GLY A . n A 1 69 GLN 69 98 98 GLN GLN A . n A 1 70 GLU 70 99 99 GLU GLU A . n A 1 71 VAL 71 100 100 VAL VAL A . n A 1 72 ILE 72 101 101 ILE ILE A . n A 1 73 VAL 73 102 102 VAL VAL A . n A 1 74 GLN 74 103 103 GLN GLN A . n A 1 75 ILE 75 104 104 ILE ILE A . n A 1 76 ASP 76 105 105 ASP ASP A . n A 1 77 LYS 77 106 106 LYS LYS A . n A 1 78 GLU 78 107 107 GLU GLU A . n A 1 79 GLU 79 108 108 GLU GLU A . n A 1 80 ARG 80 109 109 ARG ARG A . n A 1 81 GLY 81 110 110 GLY GLY A . n A 1 82 ASN 82 111 111 ASN ASN A . n A 1 83 LYS 83 112 112 LYS LYS A . n A 1 84 GLY 84 113 113 GLY GLY A . n A 1 85 ALA 85 114 114 ALA ALA A . n A 1 86 ALA 86 115 115 ALA ALA A . n A 1 87 LEU 87 116 116 LEU LEU A . n A 1 88 THR 88 117 117 THR THR A . n A 1 89 THR 89 118 118 THR THR A . n A 1 90 PHE 90 119 119 PHE PHE A . n A 1 91 ILE 91 120 120 ILE ILE A . n A 1 92 SER 92 121 121 SER SER A . n A 1 93 LEU 93 122 122 LEU LEU A . n A 1 94 ALA 94 123 123 ALA ALA A . n A 1 95 GLY 95 124 124 GLY GLY A . n A 1 96 SER 96 125 125 SER SER A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-17 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HB2 A GLU 76 ? ? H A ALA 123 ? ? 1.13 2 1 HG21 A ILE 46 ? ? HD13 A ILE 49 ? ? 1.27 3 2 HH A TYR 82 ? ? HE2 A HIS 85 ? ? 0.90 4 3 HG22 A ILE 46 ? ? HD12 A ILE 49 ? ? 1.25 5 3 HA A GLU 108 ? ? HA2 A GLY 113 ? ? 1.27 6 3 HZ1 A LYS 71 ? ? OE2 A GLU 72 ? ? 1.58 7 4 HB2 A GLU 76 ? ? H A ALA 123 ? ? 1.20 8 4 HG A LEU 68 ? ? HB2 A LEU 116 ? ? 1.33 9 5 HH A TYR 77 ? ? HA A VAL 100 ? ? 1.04 10 5 HH A TYR 77 ? ? H A ILE 101 ? ? 1.32 11 5 HG22 A ILE 46 ? ? HD13 A ILE 49 ? ? 1.33 12 5 HB3 A PRO 51 ? ? HD2 A LYS 91 ? ? 1.33 13 6 H A ARG 109 ? ? HA2 A GLY 113 ? ? 1.24 14 6 HD21 A ASN 89 ? ? HB3 A ASP 92 ? ? 1.30 15 7 HB2 A GLU 76 ? ? H A ALA 123 ? ? 1.26 16 8 HB2 A GLU 76 ? ? H A ALA 123 ? ? 1.10 17 9 HB2 A GLU 76 ? ? H A ALA 123 ? ? 1.20 18 9 HG A LEU 68 ? ? HB2 A LEU 116 ? ? 1.27 19 10 HG A LEU 68 ? ? HB2 A LEU 116 ? ? 1.21 20 10 HA A GLU 35 ? ? HB3 A LYS 38 ? ? 1.26 21 10 HB A ILE 101 ? ? HD13 A LEU 122 ? ? 1.31 22 10 HG21 A ILE 46 ? ? HD11 A ILE 49 ? ? 1.32 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 5 CE1 A TYR 77 ? ? CZ A TYR 77 ? ? 1.296 1.381 -0.085 0.013 N 2 5 CZ A TYR 77 ? ? CE2 A TYR 77 ? ? 1.491 1.381 0.110 0.013 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 32 ? ? -154.54 68.35 2 1 LEU A 34 ? ? 61.81 -105.16 3 1 GLU A 35 ? ? -173.16 -174.40 4 1 HIS A 65 ? ? 63.84 141.50 5 1 PRO A 79 ? ? -39.13 141.76 6 1 ARG A 109 ? ? -144.10 12.13 7 1 ASN A 111 ? ? -130.50 -31.04 8 1 PHE A 119 ? ? -81.07 46.93 9 1 ALA A 123 ? ? 72.29 80.43 10 2 HIS A 32 ? ? 69.85 -17.70 11 2 GLN A 36 ? ? 69.65 -58.00 12 2 LYS A 37 ? ? -142.89 -17.92 13 2 ASN A 40 ? ? -50.66 109.52 14 2 GLU A 54 ? ? 39.87 58.01 15 2 HIS A 65 ? ? 68.59 146.77 16 2 PRO A 79 ? ? -37.97 135.45 17 2 ALA A 80 ? ? -56.51 -7.19 18 2 VAL A 93 ? ? -120.30 -51.91 19 2 GLU A 108 ? ? -66.85 90.87 20 2 PHE A 119 ? ? -78.40 47.06 21 2 ALA A 123 ? ? 158.34 -173.89 22 3 SER A 31 ? ? -50.54 -74.33 23 3 LEU A 34 ? ? -79.38 -94.84 24 3 GLU A 35 ? ? -143.94 16.89 25 3 ASN A 40 ? ? -66.28 91.57 26 3 HIS A 65 ? ? 61.28 -159.77 27 3 ALA A 80 ? ? -48.99 -16.98 28 3 VAL A 93 ? ? -121.94 -54.86 29 3 ARG A 109 ? ? -143.98 18.91 30 3 SER A 121 ? ? -66.85 19.75 31 3 ALA A 123 ? ? 158.44 61.54 32 4 HIS A 65 ? ? 70.34 144.37 33 4 PRO A 79 ? ? -26.72 137.12 34 4 ARG A 109 ? ? -105.53 -82.71 35 4 PHE A 119 ? ? -78.15 44.45 36 4 ALA A 123 ? ? 76.94 56.21 37 5 HIS A 32 ? ? -99.26 52.24 38 5 GLN A 36 ? ? 65.35 74.02 39 5 HIS A 65 ? ? 71.25 143.28 40 5 PRO A 79 ? ? -39.08 143.65 41 5 ALA A 80 ? ? -58.95 -7.35 42 5 PHE A 119 ? ? -80.25 45.03 43 5 SER A 121 ? ? -85.03 33.48 44 5 ALA A 123 ? ? -161.66 37.67 45 6 HIS A 32 ? ? -152.02 47.72 46 6 LEU A 34 ? ? -128.48 -74.38 47 6 GLU A 54 ? ? 39.23 60.23 48 6 PRO A 79 ? ? -38.65 138.02 49 6 VAL A 93 ? ? -122.50 -54.77 50 6 ARG A 109 ? ? -146.65 49.28 51 6 SER A 121 ? ? -75.61 33.52 52 6 ALA A 123 ? ? 159.07 34.45 53 7 GLN A 36 ? ? 67.12 -69.06 54 7 HIS A 65 ? ? 59.18 107.07 55 7 PRO A 79 ? ? -32.01 138.70 56 7 SER A 83 ? ? -65.81 99.96 57 7 ALA A 84 ? ? -90.25 58.22 58 7 GLU A 108 ? ? -69.17 89.59 59 7 PHE A 119 ? ? -96.53 33.17 60 7 SER A 121 ? ? 69.84 -30.03 61 7 ALA A 123 ? ? 88.77 47.10 62 8 HIS A 32 ? ? 61.00 -153.40 63 8 MET A 33 ? ? 51.67 8.80 64 8 HIS A 65 ? ? 70.51 116.27 65 8 PRO A 79 ? ? -26.93 137.08 66 8 GLU A 108 ? ? -62.68 91.13 67 8 PHE A 119 ? ? -77.96 46.34 68 8 ALA A 123 ? ? 77.34 59.43 69 9 HIS A 32 ? ? -80.81 33.95 70 9 GLN A 36 ? ? 61.42 -118.16 71 9 HIS A 65 ? ? -35.90 131.22 72 9 PRO A 79 ? ? -38.51 139.98 73 9 SER A 121 ? ? -69.40 69.62 74 9 ALA A 123 ? ? 73.95 37.33 75 10 SER A 31 ? ? -131.98 -87.17 76 10 LEU A 34 ? ? 58.53 13.57 77 10 HIS A 65 ? ? 76.49 145.07 78 10 PRO A 79 ? ? -36.43 133.60 79 10 ALA A 84 ? ? -69.95 95.34 80 10 ARG A 109 ? ? -139.72 -68.66 81 10 PHE A 119 ? ? -78.45 42.42 82 10 SER A 121 ? ? -80.04 48.76 83 10 ALA A 123 ? ? 163.62 25.17 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 5 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 77 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.077 _pdbx_validate_planes.type 'SIDE CHAIN' #