data_1SOM # _entry.id 1SOM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SOM pdb_00001som 10.2210/pdb1som/pdb RCSB RCSB000673 ? ? WWPDB D_1000000673 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SOM _pdbx_database_status.recvd_initial_deposition_date 1999-03-17 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Greenblatt, H.M.' 1 'Millard, C.B.' 2 'Sussman, J.L.' 3 'Silman, I.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structures of aged phosphonylated acetylcholinesterase: nerve agent reaction products at the atomic level.' Biochemistry 38 7032 7039 1999 BICHAW US 0006-2960 0033 ? 10353814 10.1021/bi982678l 1 ;Crystal Structural of "Aged" Phosphorylated and Phosphonylated Torpedo Californica Acetylcholinesterase ; 'Structure and Function of Cholinesterases and Related Proteins' ? 425 ? 1998 ? ? ? 9999 'New York : Plenum Press' ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Millard, C.B.' 1 ? primary 'Kryger, G.' 2 ? primary 'Ordentlich, A.' 3 ? primary 'Greenblatt, H.M.' 4 ? primary 'Harel, M.' 5 ? primary 'Raves, M.L.' 6 ? primary 'Segall, Y.' 7 ? primary 'Barak, D.' 8 ? primary 'Shafferman, A.' 9 ? primary 'Silman, I.' 10 ? primary 'Sussman, J.L.' 11 ? 1 'Millard, C.B.' 12 ? 1 'Kryger, G.' 13 ? 1 'Ordentlich, A.' 14 ? 1 'Harel, M.' 15 ? 1 'Raves, M.L.' 16 ? 1 'Greenblat, H.M.' 17 ? 1 'Segall, Y.' 18 ? 1 'Barak, D.' 19 ? 1 'Shafferman, A.' 20 ? 1 'Silman, I.' 21 ? 1 'Sussman, J.L.' 22 ? # loop_ _citation_editor.citation_id _citation_editor.name _citation_editor.ordinal 1 'Doctor, B.P.' 1 1 'Taylor, P.' 2 1 'Quinn, D.M.' 3 1 'Rotundo, R.L.' 4 1 'K Gentry, M.' 5 # _cell.entry_id 1SOM _cell.length_a 111.560 _cell.length_b 111.560 _cell.length_c 137.002 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SOM _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PROTEIN (ACETYLCHOLINESTERASE)' 61325.090 1 3.1.1.7 ? ? 'NERVE AGENT GD (SOMAN) COVALENTLY BOUND TO CATALYTIC SERINE (SER200)' 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 10 ? ? ? ? 4 non-polymer syn 'METHYLPHOSPHONIC ACID ESTER GROUP' 79.015 1 ? ? ? ? 5 water nat water 18.015 184 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DDHSELLVNTKSGKVMGTRVPVLSSHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSG SEMWNPNREMSEDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHG SQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAE GRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIFRFSFVPVIDGEFFPTSLESMLNSGNFKKTQIL LGVNKDEGSFFLLYGAPGFSKDSESKISREDFMSGVKLSVPHANDLGLDAVTLQYTDWMDDNNGIKNRDGLDDIVGDHNV ICPLMHFVNKYTKFGNGTYLYFFNHRASNLVWPEWMGVIHGYEIEFVFGLPLVKELNYTAEEEALSRRIMHYWATFAKTG NPNEPHSQESKWPLFTTKEQKFIDLNTEPMKVHQRLRVQMCVFWNQFLPKLLNATACDGELSS ; _entity_poly.pdbx_seq_one_letter_code_can ;DDHSELLVNTKSGKVMGTRVPVLSSHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSG SEMWNPNREMSEDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHG SQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAE GRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIFRFSFVPVIDGEFFPTSLESMLNSGNFKKTQIL LGVNKDEGSFFLLYGAPGFSKDSESKISREDFMSGVKLSVPHANDLGLDAVTLQYTDWMDDNNGIKNRDGLDDIVGDHNV ICPLMHFVNKYTKFGNGTYLYFFNHRASNLVWPEWMGVIHGYEIEFVFGLPLVKELNYTAEEEALSRRIMHYWATFAKTG NPNEPHSQESKWPLFTTKEQKFIDLNTEPMKVHQRLRVQMCVFWNQFLPKLLNATACDGELSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ASP n 1 3 HIS n 1 4 SER n 1 5 GLU n 1 6 LEU n 1 7 LEU n 1 8 VAL n 1 9 ASN n 1 10 THR n 1 11 LYS n 1 12 SER n 1 13 GLY n 1 14 LYS n 1 15 VAL n 1 16 MET n 1 17 GLY n 1 18 THR n 1 19 ARG n 1 20 VAL n 1 21 PRO n 1 22 VAL n 1 23 LEU n 1 24 SER n 1 25 SER n 1 26 HIS n 1 27 ILE n 1 28 SER n 1 29 ALA n 1 30 PHE n 1 31 LEU n 1 32 GLY n 1 33 ILE n 1 34 PRO n 1 35 PHE n 1 36 ALA n 1 37 GLU n 1 38 PRO n 1 39 PRO n 1 40 VAL n 1 41 GLY n 1 42 ASN n 1 43 MET n 1 44 ARG n 1 45 PHE n 1 46 ARG n 1 47 ARG n 1 48 PRO n 1 49 GLU n 1 50 PRO n 1 51 LYS n 1 52 LYS n 1 53 PRO n 1 54 TRP n 1 55 SER n 1 56 GLY n 1 57 VAL n 1 58 TRP n 1 59 ASN n 1 60 ALA n 1 61 SER n 1 62 THR n 1 63 TYR n 1 64 PRO n 1 65 ASN n 1 66 ASN n 1 67 CYS n 1 68 GLN n 1 69 GLN n 1 70 TYR n 1 71 VAL n 1 72 ASP n 1 73 GLU n 1 74 GLN n 1 75 PHE n 1 76 PRO n 1 77 GLY n 1 78 PHE n 1 79 SER n 1 80 GLY n 1 81 SER n 1 82 GLU n 1 83 MET n 1 84 TRP n 1 85 ASN n 1 86 PRO n 1 87 ASN n 1 88 ARG n 1 89 GLU n 1 90 MET n 1 91 SER n 1 92 GLU n 1 93 ASP n 1 94 CYS n 1 95 LEU n 1 96 TYR n 1 97 LEU n 1 98 ASN n 1 99 ILE n 1 100 TRP n 1 101 VAL n 1 102 PRO n 1 103 SER n 1 104 PRO n 1 105 ARG n 1 106 PRO n 1 107 LYS n 1 108 SER n 1 109 THR n 1 110 THR n 1 111 VAL n 1 112 MET n 1 113 VAL n 1 114 TRP n 1 115 ILE n 1 116 TYR n 1 117 GLY n 1 118 GLY n 1 119 GLY n 1 120 PHE n 1 121 TYR n 1 122 SER n 1 123 GLY n 1 124 SER n 1 125 SER n 1 126 THR n 1 127 LEU n 1 128 ASP n 1 129 VAL n 1 130 TYR n 1 131 ASN n 1 132 GLY n 1 133 LYS n 1 134 TYR n 1 135 LEU n 1 136 ALA n 1 137 TYR n 1 138 THR n 1 139 GLU n 1 140 GLU n 1 141 VAL n 1 142 VAL n 1 143 LEU n 1 144 VAL n 1 145 SER n 1 146 LEU n 1 147 SER n 1 148 TYR n 1 149 ARG n 1 150 VAL n 1 151 GLY n 1 152 ALA n 1 153 PHE n 1 154 GLY n 1 155 PHE n 1 156 LEU n 1 157 ALA n 1 158 LEU n 1 159 HIS n 1 160 GLY n 1 161 SER n 1 162 GLN n 1 163 GLU n 1 164 ALA n 1 165 PRO n 1 166 GLY n 1 167 ASN n 1 168 VAL n 1 169 GLY n 1 170 LEU n 1 171 LEU n 1 172 ASP n 1 173 GLN n 1 174 ARG n 1 175 MET n 1 176 ALA n 1 177 LEU n 1 178 GLN n 1 179 TRP n 1 180 VAL n 1 181 HIS n 1 182 ASP n 1 183 ASN n 1 184 ILE n 1 185 GLN n 1 186 PHE n 1 187 PHE n 1 188 GLY n 1 189 GLY n 1 190 ASP n 1 191 PRO n 1 192 LYS n 1 193 THR n 1 194 VAL n 1 195 THR n 1 196 ILE n 1 197 PHE n 1 198 GLY n 1 199 GLU n 1 200 SER n 1 201 ALA n 1 202 GLY n 1 203 GLY n 1 204 ALA n 1 205 SER n 1 206 VAL n 1 207 GLY n 1 208 MET n 1 209 HIS n 1 210 ILE n 1 211 LEU n 1 212 SER n 1 213 PRO n 1 214 GLY n 1 215 SER n 1 216 ARG n 1 217 ASP n 1 218 LEU n 1 219 PHE n 1 220 ARG n 1 221 ARG n 1 222 ALA n 1 223 ILE n 1 224 LEU n 1 225 GLN n 1 226 SER n 1 227 GLY n 1 228 SER n 1 229 PRO n 1 230 ASN n 1 231 CYS n 1 232 PRO n 1 233 TRP n 1 234 ALA n 1 235 SER n 1 236 VAL n 1 237 SER n 1 238 VAL n 1 239 ALA n 1 240 GLU n 1 241 GLY n 1 242 ARG n 1 243 ARG n 1 244 ARG n 1 245 ALA n 1 246 VAL n 1 247 GLU n 1 248 LEU n 1 249 GLY n 1 250 ARG n 1 251 ASN n 1 252 LEU n 1 253 ASN n 1 254 CYS n 1 255 ASN n 1 256 LEU n 1 257 ASN n 1 258 SER n 1 259 ASP n 1 260 GLU n 1 261 GLU n 1 262 LEU n 1 263 ILE n 1 264 HIS n 1 265 CYS n 1 266 LEU n 1 267 ARG n 1 268 GLU n 1 269 LYS n 1 270 LYS n 1 271 PRO n 1 272 GLN n 1 273 GLU n 1 274 LEU n 1 275 ILE n 1 276 ASP n 1 277 VAL n 1 278 GLU n 1 279 TRP n 1 280 ASN n 1 281 VAL n 1 282 LEU n 1 283 PRO n 1 284 PHE n 1 285 ASP n 1 286 SER n 1 287 ILE n 1 288 PHE n 1 289 ARG n 1 290 PHE n 1 291 SER n 1 292 PHE n 1 293 VAL n 1 294 PRO n 1 295 VAL n 1 296 ILE n 1 297 ASP n 1 298 GLY n 1 299 GLU n 1 300 PHE n 1 301 PHE n 1 302 PRO n 1 303 THR n 1 304 SER n 1 305 LEU n 1 306 GLU n 1 307 SER n 1 308 MET n 1 309 LEU n 1 310 ASN n 1 311 SER n 1 312 GLY n 1 313 ASN n 1 314 PHE n 1 315 LYS n 1 316 LYS n 1 317 THR n 1 318 GLN n 1 319 ILE n 1 320 LEU n 1 321 LEU n 1 322 GLY n 1 323 VAL n 1 324 ASN n 1 325 LYS n 1 326 ASP n 1 327 GLU n 1 328 GLY n 1 329 SER n 1 330 PHE n 1 331 PHE n 1 332 LEU n 1 333 LEU n 1 334 TYR n 1 335 GLY n 1 336 ALA n 1 337 PRO n 1 338 GLY n 1 339 PHE n 1 340 SER n 1 341 LYS n 1 342 ASP n 1 343 SER n 1 344 GLU n 1 345 SER n 1 346 LYS n 1 347 ILE n 1 348 SER n 1 349 ARG n 1 350 GLU n 1 351 ASP n 1 352 PHE n 1 353 MET n 1 354 SER n 1 355 GLY n 1 356 VAL n 1 357 LYS n 1 358 LEU n 1 359 SER n 1 360 VAL n 1 361 PRO n 1 362 HIS n 1 363 ALA n 1 364 ASN n 1 365 ASP n 1 366 LEU n 1 367 GLY n 1 368 LEU n 1 369 ASP n 1 370 ALA n 1 371 VAL n 1 372 THR n 1 373 LEU n 1 374 GLN n 1 375 TYR n 1 376 THR n 1 377 ASP n 1 378 TRP n 1 379 MET n 1 380 ASP n 1 381 ASP n 1 382 ASN n 1 383 ASN n 1 384 GLY n 1 385 ILE n 1 386 LYS n 1 387 ASN n 1 388 ARG n 1 389 ASP n 1 390 GLY n 1 391 LEU n 1 392 ASP n 1 393 ASP n 1 394 ILE n 1 395 VAL n 1 396 GLY n 1 397 ASP n 1 398 HIS n 1 399 ASN n 1 400 VAL n 1 401 ILE n 1 402 CYS n 1 403 PRO n 1 404 LEU n 1 405 MET n 1 406 HIS n 1 407 PHE n 1 408 VAL n 1 409 ASN n 1 410 LYS n 1 411 TYR n 1 412 THR n 1 413 LYS n 1 414 PHE n 1 415 GLY n 1 416 ASN n 1 417 GLY n 1 418 THR n 1 419 TYR n 1 420 LEU n 1 421 TYR n 1 422 PHE n 1 423 PHE n 1 424 ASN n 1 425 HIS n 1 426 ARG n 1 427 ALA n 1 428 SER n 1 429 ASN n 1 430 LEU n 1 431 VAL n 1 432 TRP n 1 433 PRO n 1 434 GLU n 1 435 TRP n 1 436 MET n 1 437 GLY n 1 438 VAL n 1 439 ILE n 1 440 HIS n 1 441 GLY n 1 442 TYR n 1 443 GLU n 1 444 ILE n 1 445 GLU n 1 446 PHE n 1 447 VAL n 1 448 PHE n 1 449 GLY n 1 450 LEU n 1 451 PRO n 1 452 LEU n 1 453 VAL n 1 454 LYS n 1 455 GLU n 1 456 LEU n 1 457 ASN n 1 458 TYR n 1 459 THR n 1 460 ALA n 1 461 GLU n 1 462 GLU n 1 463 GLU n 1 464 ALA n 1 465 LEU n 1 466 SER n 1 467 ARG n 1 468 ARG n 1 469 ILE n 1 470 MET n 1 471 HIS n 1 472 TYR n 1 473 TRP n 1 474 ALA n 1 475 THR n 1 476 PHE n 1 477 ALA n 1 478 LYS n 1 479 THR n 1 480 GLY n 1 481 ASN n 1 482 PRO n 1 483 ASN n 1 484 GLU n 1 485 PRO n 1 486 HIS n 1 487 SER n 1 488 GLN n 1 489 GLU n 1 490 SER n 1 491 LYS n 1 492 TRP n 1 493 PRO n 1 494 LEU n 1 495 PHE n 1 496 THR n 1 497 THR n 1 498 LYS n 1 499 GLU n 1 500 GLN n 1 501 LYS n 1 502 PHE n 1 503 ILE n 1 504 ASP n 1 505 LEU n 1 506 ASN n 1 507 THR n 1 508 GLU n 1 509 PRO n 1 510 MET n 1 511 LYS n 1 512 VAL n 1 513 HIS n 1 514 GLN n 1 515 ARG n 1 516 LEU n 1 517 ARG n 1 518 VAL n 1 519 GLN n 1 520 MET n 1 521 CYS n 1 522 VAL n 1 523 PHE n 1 524 TRP n 1 525 ASN n 1 526 GLN n 1 527 PHE n 1 528 LEU n 1 529 PRO n 1 530 LYS n 1 531 LEU n 1 532 LEU n 1 533 ASN n 1 534 ALA n 1 535 THR n 1 536 ALA n 1 537 CYS n 1 538 ASP n 1 539 GLY n 1 540 GLU n 1 541 LEU n 1 542 SER n 1 543 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Pacific electric ray' _entity_src_nat.pdbx_organism_scientific 'Torpedo californica' _entity_src_nat.pdbx_ncbi_taxonomy_id 7787 _entity_src_nat.genus Torpedo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ELECTROPLAQUE _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant 'G2 FORM' _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ 'ELECTRIC ORGAN' _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ACES_TORCA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P04058 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SOM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 543 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P04058 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 564 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 543 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VXA non-polymer . 'METHYLPHOSPHONIC ACID ESTER GROUP' ? 'C H4 O2 P -1' 79.015 # _exptl.entry_id 1SOM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.8 _exptl_crystal.density_percent_sol 68 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;PROTEIN WAS CRYSTALLIZED FROM 35-40% W/V PEG 200 0.15M MES PH 6.0 0.05M NACL 4 DEG. CELSIUS , temperature 277.0K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-12 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1SOM _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30. _reflns.d_resolution_high 2.2 _reflns.number_obs 49048 _reflns.number_all ? _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05 _reflns.pdbx_netI_over_sigmaI 15.6 _reflns.B_iso_Wilson_estimate 24.0 _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 94.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.297 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1SOM _refine.ls_number_reflns_obs 48792 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF 2163305.50 _refine.ls_d_res_low 29.50 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 96.5 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21 _refine.ls_R_factor_R_free 0.251 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2460 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 35.3 _refine.aniso_B[1][1] 7.77 _refine.aniso_B[2][2] 7.77 _refine.aniso_B[3][3] -15.5 _refine.aniso_B[1][2] 3.42 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.366 _refine.solvent_model_param_bsol 49.78 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;REFINED INITIALLY WITH REFMAC TO AN R OF 23.4 AND RFREE OF 27.9 CONTINUOUS ELECTRON DENSITY FEATURES IN FRONT OF THE INDOLE RINGS OF TRP84 AND TRP279 DID NOT SATISFACTORILY REFINE WITH WATER MOLECULES. THESE FEATURES WERE LEFT EMPTY DURING REFINEMENT, BUT THEIR POSITIONS ARE INDICATED IN THE MODEL BY OXYGEN ATOMS WITH ZERO OCCUPANCY (RESIDUES 1000 - 1009) ; _refine.pdbx_starting_model 2ACE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1SOM _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.32 _refine_analyze.Luzzati_sigma_a_free 0.27 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4174 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 184 _refine_hist.number_atoms_total 4400 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 29.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.9 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.22 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 7455 _refine_ls_shell.R_factor_R_work 0.264 _refine_ls_shell.percent_reflns_obs 94.5 _refine_ls_shell.R_factor_R_free 0.292 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free 5.1 _refine_ls_shell.number_reflns_R_free 398 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 CARBOHYDRATE.PARAM CARBOHYDRATE.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 CIS_PEPTIDE.PARAM SOMAN.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1SOM _struct.title 'TORPEDO CALIFORNICA ACETYLCHOLINESTERASE INHIBITED BY NERVE AGENT GD (SOMAN).' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SOM _struct_keywords.pdbx_keywords 'SERINE HYDROLASE' _struct_keywords.text 'SERINE HYDROLASE, CHOLINESTERASE, NERVE AGENT, ORGANOPHOSPHOROUS ACID ANHYDRIDE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 4 ? O N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1A SER A 79 ? ASN A 85 ? SER A 79 ASN A 85 1 ? 7 HELX_P HELX_P2 2A GLY A 132 ? GLU A 139 ? GLY A 132 GLU A 139 1 ? 8 HELX_P HELX_P3 3A VAL A 168 ? ASN A 183 ? VAL A 168 ASN A 183 1 ? 16 HELX_P HELX_P4 4A SER A 200 ? LEU A 211 ? SER A 200 LEU A 211 1 ? 12 HELX_P HELX_P5 5A VAL A 238 ? LEU A 252 ? VAL A 238 LEU A 252 1 ? 15 HELX_P HELX_P6 6A ASP A 259 ? GLU A 268 ? ASP A 259 GLU A 268 1 ? 10 HELX_P HELX_P7 7A PRO A 271 ? GLU A 278 ? PRO A 271 GLU A 278 1 ? 8 HELX_P HELX_P8 8A LEU A 305 ? SER A 311 ? LEU A 305 SER A 311 1 ? 7 HELX_P HELX_P9 9A SER A 329 ? GLY A 335 ? SER A 329 GLY A 335 1 ? 7 HELX_P HELX_P10 10A ARG A 349 ? VAL A 360 ? ARG A 349 VAL A 360 1 ? 12 HELX_P HELX_P11 11A ASP A 365 ? THR A 376 ? ASP A 365 THR A 376 1 ? 12 HELX_P HELX_P12 12A GLY A 384 ? TYR A 411 ? GLY A 384 TYR A 411 1 ? 28 HELX_P HELX_P13 13A GLU A 443 ? PHE A 448 ? GLU A 443 PHE A 448 1 ? 6 HELX_P HELX_P14 14A ALA A 460 ? THR A 479 ? ALA A 460 THR A 479 1 ? 20 HELX_P HELX_P15 15A VAL A 518 ? THR A 535 ? VAL A 518 THR A 535 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 67 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 67 A CYS 94 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf2 disulf ? ? A CYS 254 SG ? ? ? 1_555 A CYS 265 SG ? ? A CYS 254 A CYS 265 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? A CYS 402 SG ? ? ? 1_555 A CYS 521 SG ? ? A CYS 402 A CYS 521 1_555 ? ? ? ? ? ? ? 2.026 ? ? covale1 covale one ? A ASN 59 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 59 A NAG 545 1_555 ? ? ? ? ? ? ? 1.463 ? N-Glycosylation covale2 covale none ? A SER 200 OG ? ? ? 1_555 N VXA . P1 ? ? A SER 200 A VXA 1010 1_555 ? ? ? ? ? ? ? 1.528 ? ? covale3 covale one ? A ASN 416 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 416 A NAG 544 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 103 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 103 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 104 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 104 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.35 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 11 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel B 8 9 ? parallel B 9 10 ? parallel B 10 11 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 6 ? THR A 10 ? LEU A 6 THR A 10 A 2 GLY A 13 ? MET A 16 ? GLY A 13 MET A 16 A 3 VAL A 57 ? ALA A 60 ? VAL A 57 ALA A 60 B 1 MET A 16 ? PRO A 21 ? MET A 16 PRO A 21 B 2 HIS A 26 ? PRO A 34 ? HIS A 26 PRO A 34 B 3 TYR A 96 ? PRO A 102 ? TYR A 96 PRO A 102 B 4 VAL A 142 ? SER A 147 ? VAL A 142 SER A 147 B 5 THR A 109 ? TYR A 116 ? THR A 109 TYR A 116 B 6 THR A 193 ? GLU A 199 ? THR A 193 GLU A 199 B 7 ARG A 220 ? SER A 226 ? ARG A 220 SER A 226 B 8 GLN A 318 ? ASN A 324 ? GLN A 318 ASN A 324 B 9 GLY A 417 ? PHE A 423 ? GLY A 417 PHE A 423 B 10 PHE A 502 ? LEU A 505 ? PHE A 502 LEU A 505 B 11 MET A 510 ? GLN A 514 ? MET A 510 GLN A 514 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 8 ? O VAL A 8 N VAL A 15 ? N VAL A 15 A 2 3 O LYS A 14 ? O LYS A 14 N TRP A 58 ? N TRP A 58 B 1 2 N THR A 18 ? N THR A 18 O ALA A 29 ? O ALA A 29 B 2 3 O PHE A 30 ? O PHE A 30 N ILE A 99 ? N ILE A 99 B 3 4 O TRP A 100 ? O TRP A 100 N LEU A 143 ? N LEU A 143 B 4 5 O VAL A 142 ? O VAL A 142 N MET A 112 ? N MET A 112 B 5 6 N VAL A 113 ? N VAL A 113 O THR A 195 ? O THR A 195 B 6 7 O ILE A 196 ? O ILE A 196 N ILE A 223 ? N ILE A 223 B 7 8 O LEU A 224 ? O LEU A 224 N GLY A 322 ? N GLY A 322 B 8 9 O LEU A 321 ? O LEU A 321 N TYR A 421 ? N TYR A 421 B 9 10 O LEU A 420 ? O LEU A 420 N ILE A 503 ? N ILE A 503 B 10 11 O PHE A 502 ? O PHE A 502 N HIS A 513 ? N HIS A 513 # _struct_site.id CAT _struct_site.pdbx_evidence_code Author _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'CATALYTIC TRIAD' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CAT 3 SER A 200 ? SER A 200 . ? 1_555 ? 2 CAT 3 GLU A 327 ? GLU A 327 . ? 1_555 ? 3 CAT 3 HIS A 440 ? HIS A 440 . ? 1_555 ? # _database_PDB_matrix.entry_id 1SOM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1SOM _atom_sites.fract_transf_matrix[1][1] 0.008964 _atom_sites.fract_transf_matrix[1][2] 0.005175 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010350 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007299 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 HIS 3 3 ? ? ? A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 HIS 26 26 26 HIS HIS A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 MET 43 43 43 MET MET A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 TRP 54 54 54 TRP TRP A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 TRP 84 84 84 TRP TRP A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 MET 90 90 90 MET MET A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 TRP 100 100 100 TRP TRP A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 PRO 106 106 106 PRO PRO A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 MET 112 112 112 MET MET A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 TRP 114 114 114 TRP TRP A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 TYR 121 121 121 TYR TYR A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 TYR 134 134 134 TYR TYR A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 TYR 148 148 148 TYR TYR A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 PHE 155 155 155 PHE PHE A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 HIS 159 159 159 HIS HIS A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ASN 167 167 167 ASN ASN A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 GLN 173 173 173 GLN GLN A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 MET 175 175 175 MET MET A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 TRP 179 179 179 TRP TRP A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 HIS 181 181 181 HIS HIS A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 ASN 183 183 183 ASN ASN A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 GLN 185 185 185 GLN GLN A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 THR 195 195 195 THR THR A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 SER 205 205 205 SER SER A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 MET 208 208 208 MET MET A . n A 1 209 HIS 209 209 209 HIS HIS A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 ARG 216 216 216 ARG ARG A . n A 1 217 ASP 217 217 217 ASP ASP A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 ARG 221 221 221 ARG ARG A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 GLN 225 225 225 GLN GLN A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 SER 228 228 228 SER SER A . n A 1 229 PRO 229 229 229 PRO PRO A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 CYS 231 231 231 CYS CYS A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 TRP 233 233 233 TRP TRP A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 SER 235 235 235 SER SER A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 SER 237 237 237 SER SER A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 ARG 242 242 242 ARG ARG A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 ARG 244 244 244 ARG ARG A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 VAL 246 246 246 VAL VAL A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 GLY 249 249 249 GLY GLY A . n A 1 250 ARG 250 250 250 ARG ARG A . n A 1 251 ASN 251 251 251 ASN ASN A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 ASN 253 253 253 ASN ASN A . n A 1 254 CYS 254 254 254 CYS CYS A . n A 1 255 ASN 255 255 255 ASN ASN A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 SER 258 258 258 SER SER A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 GLU 260 260 260 GLU GLU A . n A 1 261 GLU 261 261 261 GLU GLU A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 ILE 263 263 263 ILE ILE A . n A 1 264 HIS 264 264 264 HIS HIS A . n A 1 265 CYS 265 265 265 CYS CYS A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 ARG 267 267 267 ARG ARG A . n A 1 268 GLU 268 268 268 GLU GLU A . n A 1 269 LYS 269 269 269 LYS LYS A . n A 1 270 LYS 270 270 270 LYS LYS A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 GLN 272 272 272 GLN GLN A . n A 1 273 GLU 273 273 273 GLU GLU A . n A 1 274 LEU 274 274 274 LEU LEU A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 TRP 279 279 279 TRP TRP A . n A 1 280 ASN 280 280 280 ASN ASN A . n A 1 281 VAL 281 281 281 VAL VAL A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 PRO 283 283 283 PRO PRO A . n A 1 284 PHE 284 284 284 PHE PHE A . n A 1 285 ASP 285 285 285 ASP ASP A . n A 1 286 SER 286 286 286 SER SER A . n A 1 287 ILE 287 287 287 ILE ILE A . n A 1 288 PHE 288 288 288 PHE PHE A . n A 1 289 ARG 289 289 289 ARG ARG A . n A 1 290 PHE 290 290 290 PHE PHE A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 PHE 292 292 292 PHE PHE A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 VAL 295 295 295 VAL VAL A . n A 1 296 ILE 296 296 296 ILE ILE A . n A 1 297 ASP 297 297 297 ASP ASP A . n A 1 298 GLY 298 298 298 GLY GLY A . n A 1 299 GLU 299 299 299 GLU GLU A . n A 1 300 PHE 300 300 300 PHE PHE A . n A 1 301 PHE 301 301 301 PHE PHE A . n A 1 302 PRO 302 302 302 PRO PRO A . n A 1 303 THR 303 303 303 THR THR A . n A 1 304 SER 304 304 304 SER SER A . n A 1 305 LEU 305 305 305 LEU LEU A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 MET 308 308 308 MET MET A . n A 1 309 LEU 309 309 309 LEU LEU A . n A 1 310 ASN 310 310 310 ASN ASN A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 GLY 312 312 312 GLY GLY A . n A 1 313 ASN 313 313 313 ASN ASN A . n A 1 314 PHE 314 314 314 PHE PHE A . n A 1 315 LYS 315 315 315 LYS LYS A . n A 1 316 LYS 316 316 316 LYS LYS A . n A 1 317 THR 317 317 317 THR THR A . n A 1 318 GLN 318 318 318 GLN GLN A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 LEU 320 320 320 LEU LEU A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 VAL 323 323 323 VAL VAL A . n A 1 324 ASN 324 324 324 ASN ASN A . n A 1 325 LYS 325 325 325 LYS LYS A . n A 1 326 ASP 326 326 326 ASP ASP A . n A 1 327 GLU 327 327 327 GLU GLU A . n A 1 328 GLY 328 328 328 GLY GLY A . n A 1 329 SER 329 329 329 SER SER A . n A 1 330 PHE 330 330 330 PHE PHE A . n A 1 331 PHE 331 331 331 PHE PHE A . n A 1 332 LEU 332 332 332 LEU LEU A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 TYR 334 334 334 TYR TYR A . n A 1 335 GLY 335 335 335 GLY GLY A . n A 1 336 ALA 336 336 336 ALA ALA A . n A 1 337 PRO 337 337 337 PRO PRO A . n A 1 338 GLY 338 338 338 GLY GLY A . n A 1 339 PHE 339 339 339 PHE PHE A . n A 1 340 SER 340 340 340 SER SER A . n A 1 341 LYS 341 341 341 LYS LYS A . n A 1 342 ASP 342 342 342 ASP ASP A . n A 1 343 SER 343 343 343 SER SER A . n A 1 344 GLU 344 344 344 GLU GLU A . n A 1 345 SER 345 345 345 SER SER A . n A 1 346 LYS 346 346 346 LYS LYS A . n A 1 347 ILE 347 347 347 ILE ILE A . n A 1 348 SER 348 348 348 SER SER A . n A 1 349 ARG 349 349 349 ARG ARG A . n A 1 350 GLU 350 350 350 GLU GLU A . n A 1 351 ASP 351 351 351 ASP ASP A . n A 1 352 PHE 352 352 352 PHE PHE A . n A 1 353 MET 353 353 353 MET MET A . n A 1 354 SER 354 354 354 SER SER A . n A 1 355 GLY 355 355 355 GLY GLY A . n A 1 356 VAL 356 356 356 VAL VAL A . n A 1 357 LYS 357 357 357 LYS LYS A . n A 1 358 LEU 358 358 358 LEU LEU A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 VAL 360 360 360 VAL VAL A . n A 1 361 PRO 361 361 361 PRO PRO A . n A 1 362 HIS 362 362 362 HIS HIS A . n A 1 363 ALA 363 363 363 ALA ALA A . n A 1 364 ASN 364 364 364 ASN ASN A . n A 1 365 ASP 365 365 365 ASP ASP A . n A 1 366 LEU 366 366 366 LEU LEU A . n A 1 367 GLY 367 367 367 GLY GLY A . n A 1 368 LEU 368 368 368 LEU LEU A . n A 1 369 ASP 369 369 369 ASP ASP A . n A 1 370 ALA 370 370 370 ALA ALA A . n A 1 371 VAL 371 371 371 VAL VAL A . n A 1 372 THR 372 372 372 THR THR A . n A 1 373 LEU 373 373 373 LEU LEU A . n A 1 374 GLN 374 374 374 GLN GLN A . n A 1 375 TYR 375 375 375 TYR TYR A . n A 1 376 THR 376 376 376 THR THR A . n A 1 377 ASP 377 377 377 ASP ASP A . n A 1 378 TRP 378 378 378 TRP TRP A . n A 1 379 MET 379 379 379 MET MET A . n A 1 380 ASP 380 380 380 ASP ASP A . n A 1 381 ASP 381 381 381 ASP ASP A . n A 1 382 ASN 382 382 382 ASN ASN A . n A 1 383 ASN 383 383 383 ASN ASN A . n A 1 384 GLY 384 384 384 GLY GLY A . n A 1 385 ILE 385 385 385 ILE ILE A . n A 1 386 LYS 386 386 386 LYS LYS A . n A 1 387 ASN 387 387 387 ASN ASN A . n A 1 388 ARG 388 388 388 ARG ARG A . n A 1 389 ASP 389 389 389 ASP ASP A . n A 1 390 GLY 390 390 390 GLY GLY A . n A 1 391 LEU 391 391 391 LEU LEU A . n A 1 392 ASP 392 392 392 ASP ASP A . n A 1 393 ASP 393 393 393 ASP ASP A . n A 1 394 ILE 394 394 394 ILE ILE A . n A 1 395 VAL 395 395 395 VAL VAL A . n A 1 396 GLY 396 396 396 GLY GLY A . n A 1 397 ASP 397 397 397 ASP ASP A . n A 1 398 HIS 398 398 398 HIS HIS A . n A 1 399 ASN 399 399 399 ASN ASN A . n A 1 400 VAL 400 400 400 VAL VAL A . n A 1 401 ILE 401 401 401 ILE ILE A . n A 1 402 CYS 402 402 402 CYS CYS A . n A 1 403 PRO 403 403 403 PRO PRO A . n A 1 404 LEU 404 404 404 LEU LEU A . n A 1 405 MET 405 405 405 MET MET A . n A 1 406 HIS 406 406 406 HIS HIS A . n A 1 407 PHE 407 407 407 PHE PHE A . n A 1 408 VAL 408 408 408 VAL VAL A . n A 1 409 ASN 409 409 409 ASN ASN A . n A 1 410 LYS 410 410 410 LYS LYS A . n A 1 411 TYR 411 411 411 TYR TYR A . n A 1 412 THR 412 412 412 THR THR A . n A 1 413 LYS 413 413 413 LYS LYS A . n A 1 414 PHE 414 414 414 PHE PHE A . n A 1 415 GLY 415 415 415 GLY GLY A . n A 1 416 ASN 416 416 416 ASN ASN A . n A 1 417 GLY 417 417 417 GLY GLY A . n A 1 418 THR 418 418 418 THR THR A . n A 1 419 TYR 419 419 419 TYR TYR A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 TYR 421 421 421 TYR TYR A . n A 1 422 PHE 422 422 422 PHE PHE A . n A 1 423 PHE 423 423 423 PHE PHE A . n A 1 424 ASN 424 424 424 ASN ASN A . n A 1 425 HIS 425 425 425 HIS HIS A . n A 1 426 ARG 426 426 426 ARG ARG A . n A 1 427 ALA 427 427 427 ALA ALA A . n A 1 428 SER 428 428 428 SER SER A . n A 1 429 ASN 429 429 429 ASN ASN A . n A 1 430 LEU 430 430 430 LEU LEU A . n A 1 431 VAL 431 431 431 VAL VAL A . n A 1 432 TRP 432 432 432 TRP TRP A . n A 1 433 PRO 433 433 433 PRO PRO A . n A 1 434 GLU 434 434 434 GLU GLU A . n A 1 435 TRP 435 435 435 TRP TRP A . n A 1 436 MET 436 436 436 MET MET A . n A 1 437 GLY 437 437 437 GLY GLY A . n A 1 438 VAL 438 438 438 VAL VAL A . n A 1 439 ILE 439 439 439 ILE ILE A . n A 1 440 HIS 440 440 440 HIS HIS A . n A 1 441 GLY 441 441 441 GLY GLY A . n A 1 442 TYR 442 442 442 TYR TYR A . n A 1 443 GLU 443 443 443 GLU GLU A . n A 1 444 ILE 444 444 444 ILE ILE A . n A 1 445 GLU 445 445 445 GLU GLU A . n A 1 446 PHE 446 446 446 PHE PHE A . n A 1 447 VAL 447 447 447 VAL VAL A . n A 1 448 PHE 448 448 448 PHE PHE A . n A 1 449 GLY 449 449 449 GLY GLY A . n A 1 450 LEU 450 450 450 LEU LEU A . n A 1 451 PRO 451 451 451 PRO PRO A . n A 1 452 LEU 452 452 452 LEU LEU A . n A 1 453 VAL 453 453 453 VAL VAL A . n A 1 454 LYS 454 454 454 LYS LYS A . n A 1 455 GLU 455 455 455 GLU GLU A . n A 1 456 LEU 456 456 456 LEU LEU A . n A 1 457 ASN 457 457 457 ASN ASN A . n A 1 458 TYR 458 458 458 TYR TYR A . n A 1 459 THR 459 459 459 THR THR A . n A 1 460 ALA 460 460 460 ALA ALA A . n A 1 461 GLU 461 461 461 GLU GLU A . n A 1 462 GLU 462 462 462 GLU GLU A . n A 1 463 GLU 463 463 463 GLU GLU A . n A 1 464 ALA 464 464 464 ALA ALA A . n A 1 465 LEU 465 465 465 LEU LEU A . n A 1 466 SER 466 466 466 SER SER A . n A 1 467 ARG 467 467 467 ARG ARG A . n A 1 468 ARG 468 468 468 ARG ARG A . n A 1 469 ILE 469 469 469 ILE ILE A . n A 1 470 MET 470 470 470 MET MET A . n A 1 471 HIS 471 471 471 HIS HIS A . n A 1 472 TYR 472 472 472 TYR TYR A . n A 1 473 TRP 473 473 473 TRP TRP A . n A 1 474 ALA 474 474 474 ALA ALA A . n A 1 475 THR 475 475 475 THR THR A . n A 1 476 PHE 476 476 476 PHE PHE A . n A 1 477 ALA 477 477 477 ALA ALA A . n A 1 478 LYS 478 478 478 LYS LYS A . n A 1 479 THR 479 479 479 THR THR A . n A 1 480 GLY 480 480 480 GLY GLY A . n A 1 481 ASN 481 481 481 ASN ASN A . n A 1 482 PRO 482 482 482 PRO PRO A . n A 1 483 ASN 483 483 483 ASN ASN A . n A 1 484 GLU 484 484 484 GLU GLU A . n A 1 485 PRO 485 485 485 PRO PRO A . n A 1 486 HIS 486 486 ? ? ? A . n A 1 487 SER 487 487 ? ? ? A . n A 1 488 GLN 488 488 ? ? ? A . n A 1 489 GLU 489 489 ? ? ? A . n A 1 490 SER 490 490 490 SER SER A . n A 1 491 LYS 491 491 491 LYS LYS A . n A 1 492 TRP 492 492 492 TRP TRP A . n A 1 493 PRO 493 493 493 PRO PRO A . n A 1 494 LEU 494 494 494 LEU LEU A . n A 1 495 PHE 495 495 495 PHE PHE A . n A 1 496 THR 496 496 496 THR THR A . n A 1 497 THR 497 497 497 THR THR A . n A 1 498 LYS 498 498 498 LYS LYS A . n A 1 499 GLU 499 499 499 GLU GLU A . n A 1 500 GLN 500 500 500 GLN GLN A . n A 1 501 LYS 501 501 501 LYS LYS A . n A 1 502 PHE 502 502 502 PHE PHE A . n A 1 503 ILE 503 503 503 ILE ILE A . n A 1 504 ASP 504 504 504 ASP ASP A . n A 1 505 LEU 505 505 505 LEU LEU A . n A 1 506 ASN 506 506 506 ASN ASN A . n A 1 507 THR 507 507 507 THR THR A . n A 1 508 GLU 508 508 508 GLU GLU A . n A 1 509 PRO 509 509 509 PRO PRO A . n A 1 510 MET 510 510 510 MET MET A . n A 1 511 LYS 511 511 511 LYS LYS A . n A 1 512 VAL 512 512 512 VAL VAL A . n A 1 513 HIS 513 513 513 HIS HIS A . n A 1 514 GLN 514 514 514 GLN GLN A . n A 1 515 ARG 515 515 515 ARG ARG A . n A 1 516 LEU 516 516 516 LEU LEU A . n A 1 517 ARG 517 517 517 ARG ARG A . n A 1 518 VAL 518 518 518 VAL VAL A . n A 1 519 GLN 519 519 519 GLN GLN A . n A 1 520 MET 520 520 520 MET MET A . n A 1 521 CYS 521 521 521 CYS CYS A . n A 1 522 VAL 522 522 522 VAL VAL A . n A 1 523 PHE 523 523 523 PHE PHE A . n A 1 524 TRP 524 524 524 TRP TRP A . n A 1 525 ASN 525 525 525 ASN ASN A . n A 1 526 GLN 526 526 526 GLN GLN A . n A 1 527 PHE 527 527 527 PHE PHE A . n A 1 528 LEU 528 528 528 LEU LEU A . n A 1 529 PRO 529 529 529 PRO PRO A . n A 1 530 LYS 530 530 530 LYS LYS A . n A 1 531 LEU 531 531 531 LEU LEU A . n A 1 532 LEU 532 532 532 LEU LEU A . n A 1 533 ASN 533 533 533 ASN ASN A . n A 1 534 ALA 534 534 534 ALA ALA A . n A 1 535 THR 535 535 535 THR THR A . n A 1 536 ALA 536 536 ? ? ? A . n A 1 537 CYS 537 537 ? ? ? A . n A 1 538 ASP 538 538 ? ? ? A . n A 1 539 GLY 539 539 ? ? ? A . n A 1 540 GLU 540 540 ? ? ? A . n A 1 541 LEU 541 541 ? ? ? A . n A 1 542 SER 542 542 ? ? ? A . n A 1 543 SER 543 543 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 544 416 NAG NAG A . C 2 NAG 1 545 59 NAG NAG A . D 3 UNX 1 1000 1000 UNX DEN A . E 3 UNX 1 1001 1001 UNX DEN A . F 3 UNX 1 1002 1002 UNX DEN A . G 3 UNX 1 1003 1002 UNX DEN A . H 3 UNX 1 1004 1002 UNX DEN A . I 3 UNX 1 1005 1002 UNX DEN A . J 3 UNX 1 1006 1002 UNX DEN A . K 3 UNX 1 1007 1002 UNX DEN A . L 3 UNX 1 1008 1002 UNX DEN A . M 3 UNX 1 1009 1002 UNX DEN A . N 4 VXA 1 1010 200 VXA SOM A . O 5 HOH 1 600 600 HOH HOH A . O 5 HOH 2 601 601 HOH HOH A . O 5 HOH 3 602 602 HOH HOH A . O 5 HOH 4 603 603 HOH HOH A . O 5 HOH 5 604 604 HOH HOH A . O 5 HOH 6 605 605 HOH HOH A . O 5 HOH 7 606 606 HOH HOH A . O 5 HOH 8 607 607 HOH HOH A . O 5 HOH 9 608 608 HOH HOH A . O 5 HOH 10 609 609 HOH HOH A . O 5 HOH 11 610 610 HOH HOH A . O 5 HOH 12 611 611 HOH HOH A . O 5 HOH 13 612 612 HOH HOH A . O 5 HOH 14 613 613 HOH HOH A . O 5 HOH 15 614 614 HOH HOH A . O 5 HOH 16 615 615 HOH HOH A . O 5 HOH 17 616 616 HOH HOH A . O 5 HOH 18 617 617 HOH HOH A . O 5 HOH 19 618 618 HOH HOH A . O 5 HOH 20 619 619 HOH HOH A . O 5 HOH 21 620 620 HOH HOH A . O 5 HOH 22 621 621 HOH HOH A . O 5 HOH 23 622 622 HOH HOH A . O 5 HOH 24 623 623 HOH HOH A . O 5 HOH 25 624 624 HOH HOH A . O 5 HOH 26 625 625 HOH HOH A . O 5 HOH 27 626 626 HOH HOH A . O 5 HOH 28 627 627 HOH HOH A . O 5 HOH 29 628 628 HOH HOH A . O 5 HOH 30 629 629 HOH HOH A . O 5 HOH 31 630 630 HOH HOH A . O 5 HOH 32 631 631 HOH HOH A . O 5 HOH 33 632 632 HOH HOH A . O 5 HOH 34 633 633 HOH HOH A . O 5 HOH 35 634 634 HOH HOH A . O 5 HOH 36 635 635 HOH HOH A . O 5 HOH 37 636 636 HOH HOH A . O 5 HOH 38 637 637 HOH HOH A . O 5 HOH 39 638 638 HOH HOH A . O 5 HOH 40 639 639 HOH HOH A . O 5 HOH 41 640 640 HOH HOH A . O 5 HOH 42 641 641 HOH HOH A . O 5 HOH 43 642 642 HOH HOH A . O 5 HOH 44 643 643 HOH HOH A . O 5 HOH 45 644 644 HOH HOH A . O 5 HOH 46 645 645 HOH HOH A . O 5 HOH 47 646 646 HOH HOH A . O 5 HOH 48 647 647 HOH HOH A . O 5 HOH 49 648 648 HOH HOH A . O 5 HOH 50 649 649 HOH HOH A . O 5 HOH 51 650 650 HOH HOH A . O 5 HOH 52 651 651 HOH HOH A . O 5 HOH 53 652 652 HOH HOH A . O 5 HOH 54 653 653 HOH HOH A . O 5 HOH 55 654 654 HOH HOH A . O 5 HOH 56 655 655 HOH HOH A . O 5 HOH 57 656 656 HOH HOH A . O 5 HOH 58 657 657 HOH HOH A . O 5 HOH 59 658 658 HOH HOH A . O 5 HOH 60 659 659 HOH HOH A . O 5 HOH 61 660 660 HOH HOH A . O 5 HOH 62 661 661 HOH HOH A . O 5 HOH 63 662 662 HOH HOH A . O 5 HOH 64 663 663 HOH HOH A . O 5 HOH 65 664 664 HOH HOH A . O 5 HOH 66 665 665 HOH HOH A . O 5 HOH 67 666 666 HOH HOH A . O 5 HOH 68 667 667 HOH HOH A . O 5 HOH 69 668 668 HOH HOH A . O 5 HOH 70 669 669 HOH HOH A . O 5 HOH 71 670 670 HOH HOH A . O 5 HOH 72 671 671 HOH HOH A . O 5 HOH 73 672 672 HOH HOH A . O 5 HOH 74 673 673 HOH HOH A . O 5 HOH 75 674 674 HOH HOH A . O 5 HOH 76 675 675 HOH HOH A . O 5 HOH 77 676 676 HOH HOH A . O 5 HOH 78 677 677 HOH HOH A . O 5 HOH 79 678 678 HOH HOH A . O 5 HOH 80 679 679 HOH HOH A . O 5 HOH 81 680 680 HOH HOH A . O 5 HOH 82 681 681 HOH HOH A . O 5 HOH 83 682 682 HOH HOH A . O 5 HOH 84 683 683 HOH HOH A . O 5 HOH 85 684 684 HOH HOH A . O 5 HOH 86 685 685 HOH HOH A . O 5 HOH 87 686 686 HOH HOH A . O 5 HOH 88 687 687 HOH HOH A . O 5 HOH 89 688 688 HOH HOH A . O 5 HOH 90 689 689 HOH HOH A . O 5 HOH 91 690 690 HOH HOH A . O 5 HOH 92 691 691 HOH HOH A . O 5 HOH 93 692 692 HOH HOH A . O 5 HOH 94 693 693 HOH HOH A . O 5 HOH 95 694 694 HOH HOH A . O 5 HOH 96 695 695 HOH HOH A . O 5 HOH 97 696 696 HOH HOH A . O 5 HOH 98 697 697 HOH HOH A . O 5 HOH 99 698 698 HOH HOH A . O 5 HOH 100 699 699 HOH HOH A . O 5 HOH 101 700 700 HOH HOH A . O 5 HOH 102 701 701 HOH HOH A . O 5 HOH 103 702 702 HOH HOH A . O 5 HOH 104 703 703 HOH HOH A . O 5 HOH 105 704 704 HOH HOH A . O 5 HOH 106 705 705 HOH HOH A . O 5 HOH 107 706 706 HOH HOH A . O 5 HOH 108 707 707 HOH HOH A . O 5 HOH 109 708 708 HOH HOH A . O 5 HOH 110 709 709 HOH HOH A . O 5 HOH 111 710 710 HOH HOH A . O 5 HOH 112 711 711 HOH HOH A . O 5 HOH 113 712 712 HOH HOH A . O 5 HOH 114 713 713 HOH HOH A . O 5 HOH 115 714 714 HOH HOH A . O 5 HOH 116 715 715 HOH HOH A . O 5 HOH 117 716 716 HOH HOH A . O 5 HOH 118 717 717 HOH HOH A . O 5 HOH 119 718 718 HOH HOH A . O 5 HOH 120 719 719 HOH HOH A . O 5 HOH 121 720 720 HOH HOH A . O 5 HOH 122 721 721 HOH HOH A . O 5 HOH 123 722 722 HOH HOH A . O 5 HOH 124 723 723 HOH HOH A . O 5 HOH 125 724 724 HOH HOH A . O 5 HOH 126 725 725 HOH HOH A . O 5 HOH 127 726 726 HOH HOH A . O 5 HOH 128 727 727 HOH HOH A . O 5 HOH 129 728 728 HOH HOH A . O 5 HOH 130 729 729 HOH HOH A . O 5 HOH 131 730 730 HOH HOH A . O 5 HOH 132 731 731 HOH HOH A . O 5 HOH 133 732 732 HOH HOH A . O 5 HOH 134 733 733 HOH HOH A . O 5 HOH 135 734 734 HOH HOH A . O 5 HOH 136 735 735 HOH HOH A . O 5 HOH 137 736 736 HOH HOH A . O 5 HOH 138 737 737 HOH HOH A . O 5 HOH 139 738 738 HOH HOH A . O 5 HOH 140 739 739 HOH HOH A . O 5 HOH 141 740 740 HOH HOH A . O 5 HOH 142 741 741 HOH HOH A . O 5 HOH 143 742 742 HOH HOH A . O 5 HOH 144 743 743 HOH HOH A . O 5 HOH 145 744 744 HOH HOH A . O 5 HOH 146 745 745 HOH HOH A . O 5 HOH 147 746 746 HOH HOH A . O 5 HOH 148 747 747 HOH HOH A . O 5 HOH 149 748 748 HOH HOH A . O 5 HOH 150 749 749 HOH HOH A . O 5 HOH 151 750 750 HOH HOH A . O 5 HOH 152 751 751 HOH HOH A . O 5 HOH 153 752 752 HOH HOH A . O 5 HOH 154 753 753 HOH HOH A . O 5 HOH 155 754 754 HOH HOH A . O 5 HOH 156 755 755 HOH HOH A . O 5 HOH 157 756 756 HOH HOH A . O 5 HOH 158 757 757 HOH HOH A . O 5 HOH 159 758 758 HOH HOH A . O 5 HOH 160 759 759 HOH HOH A . O 5 HOH 161 760 760 HOH HOH A . O 5 HOH 162 761 761 HOH HOH A . O 5 HOH 163 762 762 HOH HOH A . O 5 HOH 164 763 763 HOH HOH A . O 5 HOH 165 764 764 HOH HOH A . O 5 HOH 166 765 765 HOH HOH A . O 5 HOH 167 766 766 HOH HOH A . O 5 HOH 168 767 767 HOH HOH A . O 5 HOH 169 768 768 HOH HOH A . O 5 HOH 170 769 769 HOH HOH A . O 5 HOH 171 770 770 HOH HOH A . O 5 HOH 172 771 771 HOH HOH A . O 5 HOH 173 772 772 HOH HOH A . O 5 HOH 174 773 773 HOH HOH A . O 5 HOH 175 774 774 HOH HOH A . O 5 HOH 176 775 775 HOH HOH A . O 5 HOH 177 776 776 HOH HOH A . O 5 HOH 178 777 777 HOH HOH A . O 5 HOH 179 778 778 HOH HOH A . O 5 HOH 180 779 779 HOH HOH A . O 5 HOH 181 780 780 HOH HOH A . O 5 HOH 182 781 781 HOH HOH A . O 5 HOH 183 782 782 HOH HOH A . O 5 HOH 184 783 783 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 59 A ASN 59 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 416 A ASN 416 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3080 ? 1 MORE 2 ? 1 'SSA (A^2)' 37560 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 137.0020000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-06-25 2 'Structure model' 1 1 2007-10-16 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2021-06-02 6 'Structure model' 1 5 2023-08-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Structure summary' 10 6 'Structure model' Advisory 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' pdbx_unobs_or_zero_occ_residues 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen 9 5 'Structure model' chem_comp 10 5 'Structure model' pdbx_struct_assembly 11 5 'Structure model' pdbx_struct_assembly_prop 12 5 'Structure model' pdbx_struct_oper_list 13 6 'Structure model' chem_comp_atom 14 6 'Structure model' chem_comp_bond 15 6 'Structure model' database_2 16 6 'Structure model' pdbx_initial_refinement_model 17 6 'Structure model' pdbx_unobs_or_zero_occ_residues # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.pdbx_role' 8 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 5 'Structure model' '_chem_comp.pdbx_synonyms' 19 5 'Structure model' '_pdbx_struct_assembly.details' 20 5 'Structure model' '_pdbx_struct_assembly.method_details' 21 5 'Structure model' '_pdbx_struct_oper_list.matrix[2][1]' 22 5 'Structure model' '_pdbx_struct_oper_list.matrix[2][2]' 23 5 'Structure model' '_pdbx_struct_oper_list.matrix[3][3]' 24 5 'Structure model' '_pdbx_struct_oper_list.name' 25 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 26 5 'Structure model' '_pdbx_struct_oper_list.vector[1]' 27 5 'Structure model' '_pdbx_struct_oper_list.vector[2]' 28 5 'Structure model' '_pdbx_struct_oper_list.vector[3]' 29 6 'Structure model' '_database_2.pdbx_DOI' 30 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _pdbx_entry_details.entry_id 1SOM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;GD (SOMAN) HAS UNDERGONE DEALKYLATION AND THE PINACOLYL GROUP IS NOT VISIBLE IN THE ELECTRON DENSITY MAPS. DUMMY ATOMS NOT USED IN REFINEMENT TO SHOW LOCATION OF TWO DENSITY FEATURES NEAR THE INDOLE RINGS OF TRP84 AND TRP279 ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 UNK _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 UNX _pdbx_validate_close_contact.auth_seq_id_1 1008 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 728 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 494 ? ? CB A LEU 494 ? ? CG A LEU 494 ? ? 129.30 115.30 14.00 2.30 N 2 1 CB A VAL 518 ? ? CA A VAL 518 ? ? C A VAL 518 ? ? 99.50 111.40 -11.90 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 45 ? ? 83.52 -17.27 2 1 PRO A 76 ? ? -38.60 126.49 3 1 SER A 108 ? ? -158.71 76.42 4 1 SER A 200 ? ? 56.28 -123.70 5 1 GLU A 299 ? ? -124.04 -76.58 6 1 THR A 317 ? ? -164.56 -161.75 7 1 ASP A 380 ? ? -156.03 49.88 8 1 VAL A 400 ? ? -127.17 -60.21 9 1 GLN A 526 ? ? -120.86 -60.64 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 442 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.073 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 42 ? CG ? A ASN 42 CG 2 1 Y 1 A ASN 42 ? OD1 ? A ASN 42 OD1 3 1 Y 1 A ASN 42 ? ND2 ? A ASN 42 ND2 4 1 Y 1 A ARG 46 ? CZ ? A ARG 46 CZ 5 1 Y 1 A ARG 46 ? NH1 ? A ARG 46 NH1 6 1 Y 1 A ARG 46 ? NH2 ? A ARG 46 NH2 7 1 Y 1 A ARG 250 ? CZ ? A ARG 250 CZ 8 1 Y 1 A ARG 250 ? NH1 ? A ARG 250 NH1 9 1 Y 1 A ARG 250 ? NH2 ? A ARG 250 NH2 10 1 Y 1 A ASN 257 ? CG ? A ASN 257 CG 11 1 Y 1 A ASN 257 ? OD1 ? A ASN 257 OD1 12 1 Y 1 A ASN 257 ? ND2 ? A ASN 257 ND2 13 1 Y 1 A GLU 260 ? OE1 ? A GLU 260 OE1 14 1 Y 1 A GLU 260 ? OE2 ? A GLU 260 OE2 15 1 Y 1 A GLU 268 ? OE1 ? A GLU 268 OE1 16 1 Y 1 A GLU 268 ? OE2 ? A GLU 268 OE2 17 1 Y 1 A GLU 344 ? OE1 ? A GLU 344 OE1 18 1 Y 1 A GLU 344 ? OE2 ? A GLU 344 OE2 19 1 Y 1 A GLU 350 ? OE1 ? A GLU 350 OE1 20 1 Y 1 A GLU 350 ? OE2 ? A GLU 350 OE2 21 1 Y 1 A LYS 357 ? NZ ? A LYS 357 NZ 22 1 Y 1 A LYS 413 ? CD ? A LYS 413 CD 23 1 Y 1 A LYS 413 ? CE ? A LYS 413 CE 24 1 Y 1 A LYS 413 ? NZ ? A LYS 413 NZ 25 1 Y 1 A LYS 498 ? CG ? A LYS 498 CG 26 1 Y 1 A LYS 498 ? CD ? A LYS 498 CD 27 1 Y 1 A LYS 498 ? CE ? A LYS 498 CE 28 1 Y 1 A LYS 498 ? NZ ? A LYS 498 NZ 29 1 Y 1 A GLU 508 ? CD ? A GLU 508 CD 30 1 Y 1 A GLU 508 ? OE1 ? A GLU 508 OE1 31 1 Y 1 A GLU 508 ? OE2 ? A GLU 508 OE2 32 1 Y 1 A ARG 515 ? CZ ? A ARG 515 CZ 33 1 Y 1 A ARG 515 ? NH1 ? A ARG 515 NH1 34 1 Y 1 A ARG 515 ? NH2 ? A ARG 515 NH2 35 1 Y 1 A GLN 526 ? OE1 ? A GLN 526 OE1 36 1 Y 1 A GLN 526 ? NE2 ? A GLN 526 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 1 ? A ASP 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A HIS 3 ? A HIS 3 4 1 Y 1 A HIS 486 ? A HIS 486 5 1 Y 1 A SER 487 ? A SER 487 6 1 Y 1 A GLN 488 ? A GLN 488 7 1 Y 1 A GLU 489 ? A GLU 489 8 1 Y 1 A ALA 536 ? A ALA 536 9 1 Y 1 A CYS 537 ? A CYS 537 10 1 Y 1 A ASP 538 ? A ASP 538 11 1 Y 1 A GLY 539 ? A GLY 539 12 1 Y 1 A GLU 540 ? A GLU 540 13 1 Y 1 A LEU 541 ? A LEU 541 14 1 Y 1 A SER 542 ? A SER 542 15 1 Y 1 A SER 543 ? A SER 543 16 1 N 0 A UNX 1000 ? D UNX ? 17 1 N 0 A UNX 1001 ? E UNX ? 18 1 N 0 A UNX 1002 ? F UNX ? 19 1 N 0 A UNX 1003 ? G UNX ? 20 1 N 0 A UNX 1004 ? H UNX ? 21 1 N 0 A UNX 1005 ? I UNX ? 22 1 N 0 A UNX 1006 ? J UNX ? 23 1 N 0 A UNX 1007 ? K UNX ? 24 1 N 0 A UNX 1008 ? L UNX ? 25 1 N 0 A UNX 1009 ? M UNX ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 VXA P1 P N N 421 VXA O1 O N N 422 VXA O2 O N N 423 VXA C1 C N N 424 VXA H11 H N N 425 VXA H12 H N N 426 VXA H13 H N N 427 VXA HP1 H N N 428 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 VXA P1 O1 doub N N 406 VXA P1 O2 sing N N 407 VXA P1 C1 sing N N 408 VXA C1 H11 sing N N 409 VXA C1 H12 sing N N 410 VXA C1 H13 sing N N 411 VXA HP1 P1 sing N N 412 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'UNKNOWN ATOM OR ION' UNX 4 'METHYLPHOSPHONIC ACID ESTER GROUP' VXA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ACE _pdbx_initial_refinement_model.details ? #