HEADER OXIDOREDUCTASE 16-MAR-04 1SP9 TITLE 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4HPPD, HPD, HPPDASE; COMPND 5 EC: 1.13.11.27; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: HPD, AT1G06570, F12K11.9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET14B KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.M.FRITZE,L.LINDEN,J.FREIGANG,G.AUERBACH,R.HUBER, AUTHOR 2 S.STEINBACHER REVDAT 2 24-FEB-09 1SP9 1 VERSN REVDAT 1 21-SEP-04 1SP9 0 JRNL AUTH I.M.FRITZE,L.LINDEN,J.FREIGANG,G.AUERBACH,R.HUBER, JRNL AUTH 2 S.STEINBACHER JRNL TITL THE CRYSTAL STRUCTURES OF ZEA MAYS AND ARABIDOPSIS JRNL TITL 2 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE JRNL REF PLANT PHYSIOL. V. 134 1388 2004 JRNL REFN ISSN 0032-0889 JRNL PMID 15084729 JRNL DOI 10.1104/PP.103.034082 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 16577 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.312 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5743 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SP9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB021895. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16577 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 16.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.14 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.85000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.60000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.42500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.60000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 139.27500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.60000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.42500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.60000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.60000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 139.27500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 92.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 HIS A 3 REMARK 465 GLN A 4 REMARK 465 ASN A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 VAL A 8 REMARK 465 SER A 9 REMARK 465 GLU A 10 REMARK 465 ASN A 11 REMARK 465 GLN A 12 REMARK 465 ASN A 13 REMARK 465 HIS A 14 REMARK 465 ASP A 15 REMARK 465 ASP A 16 REMARK 465 GLY A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 PRO A 22 REMARK 465 GLY A 23 REMARK 465 PHE A 24 REMARK 465 LYS A 25 REMARK 465 LEU A 26 REMARK 465 VAL A 27 REMARK 465 GLY A 28 REMARK 465 PHE A 29 REMARK 465 SER A 30 REMARK 465 LYS A 31 REMARK 465 PHE A 32 REMARK 465 LEU A 107 REMARK 465 SER A 108 REMARK 465 ALA A 109 REMARK 465 GLY A 110 REMARK 465 GLU A 111 REMARK 465 ILE A 112 REMARK 465 LYS A 113 REMARK 465 PRO A 114 REMARK 465 THR A 115 REMARK 465 THR A 116 REMARK 465 ALA A 194 REMARK 465 GLU A 195 REMARK 465 ASP A 196 REMARK 465 THR A 197 REMARK 465 GLU A 198 REMARK 465 LYS A 199 REMARK 465 SER A 200 REMARK 465 GLU A 201 REMARK 465 ASP A 211 REMARK 465 ALA A 212 REMARK 465 SER A 213 REMARK 465 SER A 214 REMARK 465 PHE A 215 REMARK 465 GLU A 252 REMARK 465 PHE A 253 REMARK 465 THR A 254 REMARK 465 ALA A 255 REMARK 465 ASP A 256 REMARK 465 ASP A 257 REMARK 465 VAL A 258 REMARK 465 GLY A 259 REMARK 465 THR A 260 REMARK 465 ALA A 261 REMARK 465 GLU A 262 REMARK 465 LYS A 429 REMARK 465 SER A 430 REMARK 465 ILE A 431 REMARK 465 GLU A 432 REMARK 465 GLU A 433 REMARK 465 TYR A 434 REMARK 465 GLU A 435 REMARK 465 LYS A 436 REMARK 465 THR A 437 REMARK 465 LEU A 438 REMARK 465 GLU A 439 REMARK 465 ALA A 440 REMARK 465 LYS A 441 REMARK 465 GLN A 442 REMARK 465 LEU A 443 REMARK 465 VAL A 444 REMARK 465 GLY A 445 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 HIS B 3 REMARK 465 GLN B 4 REMARK 465 ASN B 5 REMARK 465 ALA B 6 REMARK 465 ALA B 7 REMARK 465 VAL B 8 REMARK 465 SER B 9 REMARK 465 GLU B 10 REMARK 465 ASN B 11 REMARK 465 GLN B 12 REMARK 465 ASN B 13 REMARK 465 HIS B 14 REMARK 465 ASP B 15 REMARK 465 ASP B 16 REMARK 465 GLY B 17 REMARK 465 ALA B 18 REMARK 465 ALA B 19 REMARK 465 SER B 20 REMARK 465 SER B 21 REMARK 465 PRO B 22 REMARK 465 GLY B 23 REMARK 465 PHE B 24 REMARK 465 LYS B 25 REMARK 465 LEU B 26 REMARK 465 VAL B 27 REMARK 465 GLY B 28 REMARK 465 PHE B 29 REMARK 465 SER B 30 REMARK 465 LYS B 31 REMARK 465 PHE B 32 REMARK 465 LEU B 107 REMARK 465 SER B 108 REMARK 465 ALA B 109 REMARK 465 GLY B 110 REMARK 465 GLU B 111 REMARK 465 ILE B 112 REMARK 465 LYS B 113 REMARK 465 PRO B 114 REMARK 465 THR B 115 REMARK 465 THR B 116 REMARK 465 ALA B 194 REMARK 465 GLU B 195 REMARK 465 ASP B 196 REMARK 465 THR B 197 REMARK 465 GLU B 198 REMARK 465 LYS B 199 REMARK 465 SER B 200 REMARK 465 GLU B 201 REMARK 465 ASP B 211 REMARK 465 ALA B 212 REMARK 465 SER B 213 REMARK 465 SER B 214 REMARK 465 PHE B 215 REMARK 465 ALA B 255 REMARK 465 ASP B 256 REMARK 465 ASP B 257 REMARK 465 VAL B 258 REMARK 465 GLY B 259 REMARK 465 THR B 260 REMARK 465 ALA B 261 REMARK 465 GLU B 262 REMARK 465 LEU B 438 REMARK 465 GLU B 439 REMARK 465 ALA B 440 REMARK 465 LYS B 441 REMARK 465 GLN B 442 REMARK 465 LEU B 443 REMARK 465 VAL B 444 REMARK 465 GLY B 445 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 THR A 288 REMARK 475 LYS A 289 REMARK 475 LYS A 404 REMARK 475 ASP A 405 REMARK 475 GLU A 406 REMARK 475 GLU A 407 REMARK 475 GLY A 408 REMARK 475 LYS A 409 REMARK 475 GLY B 287 REMARK 475 THR B 288 REMARK 475 LYS B 289 REMARK 475 LYS B 404 REMARK 475 ASP B 405 REMARK 475 GLU B 406 REMARK 475 GLU B 407 REMARK 475 GLY B 408 REMARK 475 LYS B 409 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 VAL A 33 CB CG1 CG2 REMARK 480 ARG A 34 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS A 45 CG CD CE NZ REMARK 480 ARG A 46 CZ NH1 NH2 REMARK 480 ASP A 148 CG OD1 OD2 REMARK 480 ASN A 171 CB CG OD1 ND2 REMARK 480 GLU A 172 CB CG CD OE1 OE2 REMARK 480 LYS A 193 CB CG CD CE NZ REMARK 480 ARG A 208 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 210 CB CG CD OE1 OE2 REMARK 480 HIS A 286 CB CG ND1 CD2 CE1 NE2 REMARK 480 ARG A 290 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS A 291 CD CE NZ REMARK 480 GLN A 293 CD OE1 NE2 REMARK 480 LYS A 347 CB CG CD CE NZ REMARK 480 LYS A 348 CB CG CD CE NZ REMARK 480 ASP A 373 CG OD1 OD2 REMARK 480 GLN A 374 CB CG CD OE1 NE2 REMARK 480 LYS A 421 CB CG CD CE NZ REMARK 480 PHE A 424 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 GLU A 426 CB CG CD OE1 OE2 REMARK 480 PHE A 428 C REMARK 480 VAL B 33 CB CG1 CG2 REMARK 480 ARG B 34 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS B 45 CB CG CD CE NZ REMARK 480 ARG B 46 CZ NH1 NH2 REMARK 480 ASP B 148 CB CG OD1 OD2 REMARK 480 ASN B 171 CB CG OD1 ND2 REMARK 480 GLU B 172 CB CG CD OE1 OE2 REMARK 480 ARG B 208 CG CD NE CZ NH1 NH2 REMARK 480 GLU B 210 CB CG CD OE1 OE2 REMARK 480 PHE B 253 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 HIS B 286 CB CG ND1 CD2 CE1 NE2 REMARK 480 ARG B 290 CB CG CD NE CZ NH1 NH2 REMARK 480 GLN B 293 CD OE1 NE2 REMARK 480 GLN B 374 CB CG CD OE1 NE2 REMARK 480 LYS B 421 CB CG CD CE NZ REMARK 480 PHE B 428 C O REMARK 480 LYS B 429 N CB CG CD CE NZ REMARK 480 GLU B 432 CB CG CD OE1 OE2 REMARK 480 GLU B 433 CB CG CD OE1 OE2 REMARK 480 TYR B 434 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR B 434 OH REMARK 480 GLU B 435 CB CG CD OE1 OE2 REMARK 480 LYS B 436 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 322 OE2 GLU A 322 7555 1.99 REMARK 500 OD1 ASP A 315 OD1 ASP A 315 7555 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 38 74.09 29.48 REMARK 500 LYS A 45 -70.28 -50.23 REMARK 500 HIS A 48 -79.66 -104.01 REMARK 500 CYS A 54 -161.80 -103.16 REMARK 500 SER A 76 75.21 -150.94 REMARK 500 ASP A 77 -159.04 -112.08 REMARK 500 SER A 92 98.89 -169.03 REMARK 500 HIS A 125 -82.28 -36.86 REMARK 500 GLU A 172 39.66 29.22 REMARK 500 ALA A 173 -63.59 -127.13 REMARK 500 LEU A 181 -69.89 -90.16 REMARK 500 ASP A 218 103.38 -176.26 REMARK 500 LEU A 279 76.67 -109.99 REMARK 500 LYS A 289 77.31 -178.15 REMARK 500 ARG A 290 -177.35 60.46 REMARK 500 ASP A 315 99.64 -162.19 REMARK 500 MET A 335 150.36 -48.14 REMARK 500 LYS A 348 42.78 -101.20 REMARK 500 ARG A 349 -26.92 -150.31 REMARK 500 ASP A 352 -16.46 -41.16 REMARK 500 ASP A 372 -158.01 -142.37 REMARK 500 PRO A 389 41.99 -71.24 REMARK 500 THR A 390 -92.96 -94.14 REMARK 500 CYS A 401 0.80 57.98 REMARK 500 ASN A 423 -74.34 -106.63 REMARK 500 GLU A 426 -6.89 -51.82 REMARK 500 LEU A 427 30.92 -86.26 REMARK 500 SER B 39 33.26 -92.44 REMARK 500 LYS B 45 -96.48 -96.70 REMARK 500 ASP B 77 -155.90 -169.02 REMARK 500 SER B 79 -1.82 -48.33 REMARK 500 PRO B 121 -36.21 -37.88 REMARK 500 ASP B 124 118.16 -168.35 REMARK 500 ASN B 159 34.46 -85.20 REMARK 500 ALA B 173 -57.04 -135.80 REMARK 500 TYR B 182 147.67 -175.02 REMARK 500 ASP B 218 94.86 -161.64 REMARK 500 PHE B 247 117.61 -39.48 REMARK 500 HIS B 286 55.52 -111.30 REMARK 500 ARG B 290 179.08 59.13 REMARK 500 GLN B 307 -73.24 -84.88 REMARK 500 ASP B 315 89.81 -151.57 REMARK 500 VAL B 350 27.83 -152.03 REMARK 500 GLU B 364 45.52 -85.36 REMARK 500 LEU B 365 -8.65 -172.26 REMARK 500 ASP B 372 -159.12 -125.88 REMARK 500 PRO B 389 68.27 -68.72 REMARK 500 THR B 390 -99.49 -127.82 REMARK 500 CYS B 401 55.43 39.73 REMARK 500 LEU B 427 43.24 -84.20 REMARK 500 ILE B 431 31.21 -76.45 REMARK 500 GLU B 432 -26.89 -140.31 REMARK 500 LYS B 436 -93.65 -68.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 446 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 394 OE2 REMARK 620 2 HIS A 226 NE2 95.9 REMARK 620 3 HIS A 308 NE2 80.1 110.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B 446 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 394 OE2 REMARK 620 2 HIS B 226 NE2 90.2 REMARK 620 3 HIS B 308 NE2 88.6 113.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 446 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 B 446 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SP8 RELATED DB: PDB REMARK 900 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE DBREF 1SP9 A 1 445 UNP P93836 HPPD_ARATH 1 445 DBREF 1SP9 B 1 445 UNP P93836 HPPD_ARATH 1 445 SEQRES 1 A 445 MET GLY HIS GLN ASN ALA ALA VAL SER GLU ASN GLN ASN SEQRES 2 A 445 HIS ASP ASP GLY ALA ALA SER SER PRO GLY PHE LYS LEU SEQRES 3 A 445 VAL GLY PHE SER LYS PHE VAL ARG LYS ASN PRO LYS SER SEQRES 4 A 445 ASP LYS PHE LYS VAL LYS ARG PHE HIS HIS ILE GLU PHE SEQRES 5 A 445 TRP CYS GLY ASP ALA THR ASN VAL ALA ARG ARG PHE SER SEQRES 6 A 445 TRP GLY LEU GLY MET ARG PHE SER ALA LYS SER ASP LEU SEQRES 7 A 445 SER THR GLY ASN MET VAL HIS ALA SER TYR LEU LEU THR SEQRES 8 A 445 SER GLY ASP LEU ARG PHE LEU PHE THR ALA PRO TYR SER SEQRES 9 A 445 PRO SER LEU SER ALA GLY GLU ILE LYS PRO THR THR THR SEQRES 10 A 445 ALA SER ILE PRO SER PHE ASP HIS GLY SER CYS ARG SER SEQRES 11 A 445 PHE PHE SER SER HIS GLY LEU GLY VAL ARG ALA VAL ALA SEQRES 12 A 445 ILE GLU VAL GLU ASP ALA GLU SER ALA PHE SER ILE SER SEQRES 13 A 445 VAL ALA ASN GLY ALA ILE PRO SER SER PRO PRO ILE VAL SEQRES 14 A 445 LEU ASN GLU ALA VAL THR ILE ALA GLU VAL LYS LEU TYR SEQRES 15 A 445 GLY ASP VAL VAL LEU ARG TYR VAL SER TYR LYS ALA GLU SEQRES 16 A 445 ASP THR GLU LYS SER GLU PHE LEU PRO GLY PHE GLU ARG SEQRES 17 A 445 VAL GLU ASP ALA SER SER PHE PRO LEU ASP TYR GLY ILE SEQRES 18 A 445 ARG ARG LEU ASP HIS ALA VAL GLY ASN VAL PRO GLU LEU SEQRES 19 A 445 GLY PRO ALA LEU THR TYR VAL ALA GLY PHE THR GLY PHE SEQRES 20 A 445 HIS GLN PHE ALA GLU PHE THR ALA ASP ASP VAL GLY THR SEQRES 21 A 445 ALA GLU SER GLY LEU ASN SER ALA VAL LEU ALA SER ASN SEQRES 22 A 445 ASP GLU MET VAL LEU LEU PRO ILE ASN GLU PRO VAL HIS SEQRES 23 A 445 GLY THR LYS ARG LYS SER GLN ILE GLN THR TYR LEU GLU SEQRES 24 A 445 HIS ASN GLU GLY ALA GLY LEU GLN HIS LEU ALA LEU MET SEQRES 25 A 445 SER GLU ASP ILE PHE ARG THR LEU ARG GLU MET ARG LYS SEQRES 26 A 445 ARG SER SER ILE GLY GLY PHE ASP PHE MET PRO SER PRO SEQRES 27 A 445 PRO PRO THR TYR TYR GLN ASN LEU LYS LYS ARG VAL GLY SEQRES 28 A 445 ASP VAL LEU SER ASP ASP GLN ILE LYS GLU CYS GLU GLU SEQRES 29 A 445 LEU GLY ILE LEU VAL ASP ARG ASP ASP GLN GLY THR LEU SEQRES 30 A 445 LEU GLN ILE PHE THR LYS PRO LEU GLY ASP ARG PRO THR SEQRES 31 A 445 ILE PHE ILE GLU ILE ILE GLN ARG VAL GLY CYS MET MET SEQRES 32 A 445 LYS ASP GLU GLU GLY LYS ALA TYR GLN SER GLY GLY CYS SEQRES 33 A 445 GLY GLY PHE GLY LYS GLY ASN PHE SER GLU LEU PHE LYS SEQRES 34 A 445 SER ILE GLU GLU TYR GLU LYS THR LEU GLU ALA LYS GLN SEQRES 35 A 445 LEU VAL GLY SEQRES 1 B 445 MET GLY HIS GLN ASN ALA ALA VAL SER GLU ASN GLN ASN SEQRES 2 B 445 HIS ASP ASP GLY ALA ALA SER SER PRO GLY PHE LYS LEU SEQRES 3 B 445 VAL GLY PHE SER LYS PHE VAL ARG LYS ASN PRO LYS SER SEQRES 4 B 445 ASP LYS PHE LYS VAL LYS ARG PHE HIS HIS ILE GLU PHE SEQRES 5 B 445 TRP CYS GLY ASP ALA THR ASN VAL ALA ARG ARG PHE SER SEQRES 6 B 445 TRP GLY LEU GLY MET ARG PHE SER ALA LYS SER ASP LEU SEQRES 7 B 445 SER THR GLY ASN MET VAL HIS ALA SER TYR LEU LEU THR SEQRES 8 B 445 SER GLY ASP LEU ARG PHE LEU PHE THR ALA PRO TYR SER SEQRES 9 B 445 PRO SER LEU SER ALA GLY GLU ILE LYS PRO THR THR THR SEQRES 10 B 445 ALA SER ILE PRO SER PHE ASP HIS GLY SER CYS ARG SER SEQRES 11 B 445 PHE PHE SER SER HIS GLY LEU GLY VAL ARG ALA VAL ALA SEQRES 12 B 445 ILE GLU VAL GLU ASP ALA GLU SER ALA PHE SER ILE SER SEQRES 13 B 445 VAL ALA ASN GLY ALA ILE PRO SER SER PRO PRO ILE VAL SEQRES 14 B 445 LEU ASN GLU ALA VAL THR ILE ALA GLU VAL LYS LEU TYR SEQRES 15 B 445 GLY ASP VAL VAL LEU ARG TYR VAL SER TYR LYS ALA GLU SEQRES 16 B 445 ASP THR GLU LYS SER GLU PHE LEU PRO GLY PHE GLU ARG SEQRES 17 B 445 VAL GLU ASP ALA SER SER PHE PRO LEU ASP TYR GLY ILE SEQRES 18 B 445 ARG ARG LEU ASP HIS ALA VAL GLY ASN VAL PRO GLU LEU SEQRES 19 B 445 GLY PRO ALA LEU THR TYR VAL ALA GLY PHE THR GLY PHE SEQRES 20 B 445 HIS GLN PHE ALA GLU PHE THR ALA ASP ASP VAL GLY THR SEQRES 21 B 445 ALA GLU SER GLY LEU ASN SER ALA VAL LEU ALA SER ASN SEQRES 22 B 445 ASP GLU MET VAL LEU LEU PRO ILE ASN GLU PRO VAL HIS SEQRES 23 B 445 GLY THR LYS ARG LYS SER GLN ILE GLN THR TYR LEU GLU SEQRES 24 B 445 HIS ASN GLU GLY ALA GLY LEU GLN HIS LEU ALA LEU MET SEQRES 25 B 445 SER GLU ASP ILE PHE ARG THR LEU ARG GLU MET ARG LYS SEQRES 26 B 445 ARG SER SER ILE GLY GLY PHE ASP PHE MET PRO SER PRO SEQRES 27 B 445 PRO PRO THR TYR TYR GLN ASN LEU LYS LYS ARG VAL GLY SEQRES 28 B 445 ASP VAL LEU SER ASP ASP GLN ILE LYS GLU CYS GLU GLU SEQRES 29 B 445 LEU GLY ILE LEU VAL ASP ARG ASP ASP GLN GLY THR LEU SEQRES 30 B 445 LEU GLN ILE PHE THR LYS PRO LEU GLY ASP ARG PRO THR SEQRES 31 B 445 ILE PHE ILE GLU ILE ILE GLN ARG VAL GLY CYS MET MET SEQRES 32 B 445 LYS ASP GLU GLU GLY LYS ALA TYR GLN SER GLY GLY CYS SEQRES 33 B 445 GLY GLY PHE GLY LYS GLY ASN PHE SER GLU LEU PHE LYS SEQRES 34 B 445 SER ILE GLU GLU TYR GLU LYS THR LEU GLU ALA LYS GLN SEQRES 35 B 445 LEU VAL GLY HET FE2 A 446 1 HET FE2 B 446 1 HETNAM FE2 FE (II) ION FORMUL 3 FE2 2(FE 2+) HELIX 1 1 ASP A 56 LEU A 68 1 13 HELIX 2 2 ASP A 124 GLY A 136 1 13 HELIX 3 3 ASP A 148 ASN A 159 1 12 HELIX 4 4 GLU A 233 GLY A 246 1 14 HELIX 5 5 SER A 292 ASN A 301 1 10 HELIX 6 6 ASP A 315 LYS A 325 1 11 HELIX 7 7 ARG A 326 GLY A 330 5 5 HELIX 8 8 PRO A 339 LYS A 348 1 10 HELIX 9 9 SER A 355 GLY A 366 1 12 HELIX 10 10 ASP B 56 GLY B 69 1 14 HELIX 11 11 ASP B 77 GLY B 81 5 5 HELIX 12 12 ASP B 124 GLY B 136 1 13 HELIX 13 13 ASP B 148 ASN B 159 1 12 HELIX 14 14 GLU B 233 GLY B 246 1 14 HELIX 15 15 SER B 292 ASN B 301 1 10 HELIX 16 16 ASP B 315 ARG B 324 1 10 HELIX 17 17 PRO B 339 ASN B 345 1 7 HELIX 18 18 ASN B 345 GLY B 351 1 7 HELIX 19 19 SER B 355 GLU B 364 1 10 HELIX 20 20 GLY B 422 LEU B 427 1 6 HELIX 21 21 LYS B 429 THR B 437 1 9 SHEET 1 A 9 PRO A 163 LEU A 170 0 SHEET 2 A 9 VAL A 174 TYR A 182 -1 O VAL A 174 N LEU A 170 SHEET 3 A 9 VAL A 185 SER A 191 -1 O TYR A 189 N ALA A 177 SHEET 4 A 9 VAL A 139 GLU A 145 1 N ARG A 140 O VAL A 186 SHEET 5 A 9 PHE A 47 TRP A 53 -1 N GLU A 51 O ARG A 140 SHEET 6 A 9 LEU A 95 PRO A 102 1 O LEU A 98 N PHE A 52 SHEET 7 A 9 HIS A 85 SER A 92 -1 N LEU A 90 O PHE A 97 SHEET 8 A 9 ARG A 71 LYS A 75 -1 N ARG A 71 O THR A 91 SHEET 9 A 9 GLU A 207 ARG A 208 -1 O GLU A 207 N LYS A 75 SHEET 1 B 8 HIS A 248 GLN A 249 0 SHEET 2 B 8 LEU A 265 ALA A 271 -1 O ALA A 271 N HIS A 248 SHEET 3 B 8 LEU A 278 PRO A 284 -1 O GLU A 283 N ASN A 266 SHEET 4 B 8 ILE A 221 ASN A 230 1 N GLY A 229 O PRO A 280 SHEET 5 B 8 GLY A 305 SER A 313 -1 O MET A 312 N ARG A 222 SHEET 6 B 8 PHE A 392 GLY A 400 1 O ILE A 396 N LEU A 311 SHEET 7 B 8 GLY A 375 PRO A 384 -1 N THR A 376 O VAL A 399 SHEET 8 B 8 LEU A 368 ARG A 371 -1 N LEU A 368 O GLN A 379 SHEET 1 C 2 MET A 402 MET A 403 0 SHEET 2 C 2 TYR A 411 GLN A 412 -1 O TYR A 411 N MET A 403 SHEET 1 D 9 PRO B 163 LEU B 170 0 SHEET 2 D 9 VAL B 174 LYS B 180 -1 O VAL B 174 N LEU B 170 SHEET 3 D 9 VAL B 186 SER B 191 -1 O TYR B 189 N ALA B 177 SHEET 4 D 9 GLY B 138 VAL B 146 1 N VAL B 142 O VAL B 186 SHEET 5 D 9 VAL B 44 TRP B 53 -1 N GLU B 51 O ALA B 141 SHEET 6 D 9 LEU B 95 PRO B 102 1 O LEU B 98 N ILE B 50 SHEET 7 D 9 HIS B 85 SER B 92 -1 N TYR B 88 O PHE B 99 SHEET 8 D 9 ARG B 71 SER B 76 -1 N ARG B 71 O THR B 91 SHEET 9 D 9 GLU B 207 ARG B 208 -1 O GLU B 207 N LYS B 75 SHEET 1 E 8 HIS B 248 PHE B 250 0 SHEET 2 E 8 LEU B 265 ALA B 271 -1 O ALA B 271 N HIS B 248 SHEET 3 E 8 LEU B 278 PRO B 284 -1 O LEU B 279 N LEU B 270 SHEET 4 E 8 ILE B 221 ASN B 230 1 N GLY B 229 O ASN B 282 SHEET 5 E 8 GLY B 305 SER B 313 -1 O ALA B 310 N HIS B 226 SHEET 6 E 8 PHE B 392 VAL B 399 1 O GLU B 394 N LEU B 311 SHEET 7 E 8 THR B 376 THR B 382 -1 N THR B 376 O VAL B 399 SHEET 8 E 8 LEU B 368 ARG B 371 -1 N ASP B 370 O LEU B 377 SHEET 1 F 2 MET B 402 LYS B 404 0 SHEET 2 F 2 ALA B 410 GLN B 412 -1 O TYR B 411 N MET B 403 SSBOND 1 CYS A 401 CYS A 416 1555 1555 2.03 SSBOND 2 CYS B 401 CYS B 416 1555 1555 2.03 LINK FE FE2 A 446 OE2 GLU A 394 1555 1555 2.42 LINK FE FE2 A 446 NE2 HIS A 226 1555 1555 2.71 LINK FE FE2 A 446 NE2 HIS A 308 1555 1555 2.21 LINK FE FE2 B 446 OE2 GLU B 394 1555 1555 2.32 LINK FE FE2 B 446 NE2 HIS B 226 1555 1555 2.50 LINK FE FE2 B 446 NE2 HIS B 308 1555 1555 2.44 SITE 1 AC1 3 HIS A 226 HIS A 308 GLU A 394 SITE 1 AC2 3 HIS B 226 HIS B 308 GLU B 394 CRYST1 95.200 95.200 185.700 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010504 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005385 0.00000