HEADER OXIDOREDUCTASE 21-JUL-93 1SPD TITLE AMYOTROPHIC LATERAL SCLEROSIS AND STRUCTURAL DEFECTS IN CU,ZN TITLE 2 SUPEROXIDE DISMUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS OXIDOREDUCTASE, SUPEROXIDE ACCEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR H.E.PARGE,J.A.TAINER REVDAT 8 30-OCT-24 1SPD 1 REMARK LINK REVDAT 7 14-AUG-19 1SPD 1 REMARK REVDAT 6 17-JUL-19 1SPD 1 REMARK LINK REVDAT 5 29-NOV-17 1SPD 1 HELIX REVDAT 4 29-FEB-12 1SPD 1 JRNL VERSN REVDAT 3 24-FEB-09 1SPD 1 VERSN REVDAT 2 01-APR-03 1SPD 1 JRNL REVDAT 1 30-APR-94 1SPD 0 JRNL AUTH H.X.DENG,A.HENTATI,J.A.TAINER,Z.IQBAL,A.CAYABYAB,W.Y.HUNG, JRNL AUTH 2 E.D.GETZOFF,P.HU,B.HERZFELDT,R.P.ROOS,C.WARNER,G.DENG, JRNL AUTH 3 E.SORIANO,C.SMYTH,H.E.PARGE,A.AHMED,A.D.ROSES,R.A.HALLEWELL, JRNL AUTH 4 M.A.PERICAK-VANCE,T.SIDDIQUE JRNL TITL AMYOTROPHIC LATERAL SCLEROSIS AND STRUCTURAL DEFECTS IN JRNL TITL 2 CU,ZN SUPEROXIDE DISMUTASE. JRNL REF SCIENCE V. 261 1047 1993 JRNL REFN ISSN 0036-8075 JRNL PMID 8351519 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 5.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2226 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.77500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.77500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.77500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR CHAIN *A* WHEN APPLIED TO REMARK 300 CHAIN *B*. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL B 14 N GLN B 15 1.74 REMARK 500 O ASP A 125 NZ LYS A 128 2.05 REMARK 500 ND1 HIS A 80 OD2 ASP A 83 2.09 REMARK 500 ND1 HIS B 46 NE2 HIS B 63 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR A 2 CB THR A 2 OG1 0.125 REMARK 500 GLU A 24 CD GLU A 24 OE2 0.071 REMARK 500 GLY A 27 CA GLY A 27 C 0.101 REMARK 500 GLY A 41 CA GLY A 41 C 0.106 REMARK 500 GLY A 44 N GLY A 44 CA 0.093 REMARK 500 GLY A 56 CA GLY A 56 C 0.111 REMARK 500 GLY A 72 N GLY A 72 CA -0.095 REMARK 500 HIS A 80 CG HIS A 80 CD2 0.087 REMARK 500 HIS A 80 CE1 HIS A 80 NE2 -0.093 REMARK 500 SER A 98 CB SER A 98 OG 0.079 REMARK 500 HIS A 120 NE2 HIS A 120 CD2 -0.072 REMARK 500 GLY B 12 CA GLY B 12 C 0.116 REMARK 500 VAL B 14 C GLN B 15 N -0.210 REMARK 500 ILE B 17 N ILE B 17 CA 0.122 REMARK 500 GLY B 27 N GLY B 27 CA 0.095 REMARK 500 GLY B 33 N GLY B 33 CA 0.178 REMARK 500 GLY B 41 N GLY B 41 CA 0.125 REMARK 500 HIS B 63 CE1 HIS B 63 NE2 -0.067 REMARK 500 HIS B 71 CG HIS B 71 CD2 0.073 REMARK 500 HIS B 80 CE1 HIS B 80 NE2 -0.085 REMARK 500 GLU B 132 CD GLU B 132 OE2 0.080 REMARK 500 GLY B 150 N GLY B 150 CA 0.133 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 1 CB - CA - C ANGL. DEV. = -9.3 DEGREES REMARK 500 ALA A 1 CA - C - O ANGL. DEV. = 17.7 DEGREES REMARK 500 ALA A 1 CA - C - N ANGL. DEV. = -17.6 DEGREES REMARK 500 THR A 2 N - CA - CB ANGL. DEV. = -15.8 DEGREES REMARK 500 THR A 2 OG1 - CB - CG2 ANGL. DEV. = 15.0 DEGREES REMARK 500 THR A 2 CA - CB - OG1 ANGL. DEV. = -13.1 DEGREES REMARK 500 THR A 2 N - CA - C ANGL. DEV. = 17.4 DEGREES REMARK 500 LYS A 3 CD - CE - NZ ANGL. DEV. = -15.2 DEGREES REMARK 500 ALA A 4 CA - C - N ANGL. DEV. = -13.8 DEGREES REMARK 500 ALA A 4 O - C - N ANGL. DEV. = 19.6 DEGREES REMARK 500 VAL A 5 C - N - CA ANGL. DEV. = -23.5 DEGREES REMARK 500 CYS A 6 O - C - N ANGL. DEV. = 10.3 DEGREES REMARK 500 LEU A 8 CA - CB - CG ANGL. DEV. = 16.7 DEGREES REMARK 500 LEU A 8 O - C - N ANGL. DEV. = 14.8 DEGREES REMARK 500 LYS A 9 CA - CB - CG ANGL. DEV. = 13.6 DEGREES REMARK 500 LYS A 9 CA - C - N ANGL. DEV. = 12.7 DEGREES REMARK 500 VAL A 14 N - CA - CB ANGL. DEV. = -13.6 DEGREES REMARK 500 VAL A 14 CA - CB - CG1 ANGL. DEV. = -14.3 DEGREES REMARK 500 VAL A 14 CA - CB - CG2 ANGL. DEV. = 13.7 DEGREES REMARK 500 GLN A 15 C - N - CA ANGL. DEV. = -17.4 DEGREES REMARK 500 GLN A 15 CA - CB - CG ANGL. DEV. = 17.2 DEGREES REMARK 500 ASN A 19 O - C - N ANGL. DEV. = 10.6 DEGREES REMARK 500 PHE A 20 C - N - CA ANGL. DEV. = -16.8 DEGREES REMARK 500 PHE A 20 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 GLU A 24 CA - C - O ANGL. DEV. = 12.9 DEGREES REMARK 500 GLY A 27 C - N - CA ANGL. DEV. = -26.6 DEGREES REMARK 500 PRO A 28 N - CA - C ANGL. DEV. = 24.9 DEGREES REMARK 500 PRO A 28 CA - C - O ANGL. DEV. = 16.0 DEGREES REMARK 500 PRO A 28 CA - C - N ANGL. DEV. = -15.8 DEGREES REMARK 500 VAL A 29 CA - C - N ANGL. DEV. = -13.4 DEGREES REMARK 500 VAL A 29 O - C - N ANGL. DEV. = 12.2 DEGREES REMARK 500 VAL A 31 CA - C - N ANGL. DEV. = -14.0 DEGREES REMARK 500 TRP A 32 O - C - N ANGL. DEV. = 11.5 DEGREES REMARK 500 SER A 34 O - C - N ANGL. DEV. = 11.6 DEGREES REMARK 500 LEU A 38 CA - C - N ANGL. DEV. = -13.4 DEGREES REMARK 500 THR A 39 C - N - CA ANGL. DEV. = 23.9 DEGREES REMARK 500 LEU A 42 O - C - N ANGL. DEV. = 10.2 DEGREES REMARK 500 HIS A 43 CA - CB - CG ANGL. DEV. = -12.0 DEGREES REMARK 500 PHE A 45 CA - C - N ANGL. DEV. = -16.0 DEGREES REMARK 500 HIS A 48 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 GLU A 49 OE1 - CD - OE2 ANGL. DEV. = -8.6 DEGREES REMARK 500 PHE A 50 O - C - N ANGL. DEV. = 13.9 DEGREES REMARK 500 ASP A 52 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 ASP A 52 CB - CG - OD2 ANGL. DEV. = 8.9 DEGREES REMARK 500 CYS A 57 C - N - CA ANGL. DEV. = 21.9 DEGREES REMARK 500 SER A 59 N - CA - CB ANGL. DEV. = -10.8 DEGREES REMARK 500 ALA A 60 N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 PRO A 62 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 PRO A 62 O - C - N ANGL. DEV. = -9.6 DEGREES REMARK 500 ASN A 65 N - CA - C ANGL. DEV. = 17.5 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 253 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 157.68 69.04 REMARK 500 LYS A 3 104.25 -24.21 REMARK 500 CYS A 6 136.36 176.94 REMARK 500 LYS A 23 -142.23 -82.16 REMARK 500 GLU A 24 115.52 -3.67 REMARK 500 SER A 25 -81.97 14.62 REMARK 500 PRO A 28 96.50 -58.39 REMARK 500 GLU A 40 178.19 -59.77 REMARK 500 PHE A 45 88.49 -158.93 REMARK 500 ALA A 55 80.06 -155.39 REMARK 500 PRO A 62 -163.47 -72.45 REMARK 500 PHE A 64 104.95 -40.50 REMARK 500 PRO A 66 -45.93 6.22 REMARK 500 SER A 68 97.73 -54.56 REMARK 500 ASP A 76 -159.98 -93.06 REMARK 500 LEU A 84 -106.68 -83.29 REMARK 500 ASP A 90 -144.35 -97.07 REMARK 500 ASP A 92 48.82 35.12 REMARK 500 GLU A 100 57.18 -150.68 REMARK 500 SER A 105 -164.30 -107.56 REMARK 500 LEU A 106 13.42 -143.30 REMARK 500 SER A 107 88.19 171.20 REMARK 500 ASP A 109 -112.15 51.72 REMARK 500 HIS A 110 64.87 -65.70 REMARK 500 LEU A 126 19.45 44.02 REMARK 500 LYS A 128 -4.63 -56.95 REMARK 500 SER A 134 -69.94 -92.21 REMARK 500 THR A 135 -31.86 -30.34 REMARK 500 LYS A 136 -78.00 -72.20 REMARK 500 ASN A 139 4.38 59.21 REMARK 500 ALA A 140 46.36 -62.60 REMARK 500 ALA A 152 -137.07 -81.29 REMARK 500 GLN B 15 111.34 -34.04 REMARK 500 GLN B 22 125.21 174.59 REMARK 500 LYS B 23 -153.28 -126.54 REMARK 500 GLU B 24 54.47 24.01 REMARK 500 SER B 25 -30.83 59.92 REMARK 500 ASN B 26 54.27 -161.13 REMARK 500 ASN B 53 33.46 -149.15 REMARK 500 SER B 68 40.80 82.65 REMARK 500 LYS B 70 -159.36 -104.78 REMARK 500 HIS B 80 -72.77 -8.58 REMARK 500 VAL B 81 -38.65 143.96 REMARK 500 ASP B 90 127.10 -36.71 REMARK 500 LYS B 91 -67.88 14.63 REMARK 500 ILE B 104 50.81 -93.10 REMARK 500 SER B 107 -116.06 -158.69 REMARK 500 ASP B 109 162.94 81.57 REMARK 500 HIS B 110 16.79 55.73 REMARK 500 ASP B 125 42.88 -91.92 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 154 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 ND1 REMARK 620 2 HIS A 48 NE2 139.6 REMARK 620 3 HIS A 63 NE2 89.6 95.9 REMARK 620 4 HIS A 120 NE2 78.2 91.8 167.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 155 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 63 ND1 REMARK 620 2 HIS A 71 ND1 143.8 REMARK 620 3 HIS A 80 ND1 102.3 113.0 REMARK 620 4 ASP A 83 OD2 116.3 75.8 62.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 154 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 46 ND1 REMARK 620 2 HIS B 48 NE2 125.0 REMARK 620 3 HIS B 63 NE2 59.5 83.0 REMARK 620 4 HIS B 120 NE2 95.4 98.4 147.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 155 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 63 ND1 REMARK 620 2 HIS B 71 ND1 128.8 REMARK 620 3 HIS B 80 ND1 124.7 85.2 REMARK 620 4 ASP B 83 OD2 146.3 77.4 71.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CUA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CUB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: ZNB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 155 DBREF 1SPD A 1 153 UNP P00441 SODC_HUMAN 1 153 DBREF 1SPD B 1 153 UNP P00441 SODC_HUMAN 1 153 SEQRES 1 A 154 ACE ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY SEQRES 2 A 154 PRO VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER SEQRES 3 A 154 ASN GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU SEQRES 4 A 154 THR GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY SEQRES 5 A 154 ASP ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE SEQRES 6 A 154 ASN PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU SEQRES 7 A 154 GLU ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP SEQRES 8 A 154 LYS ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL SEQRES 9 A 154 ILE SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR SEQRES 10 A 154 LEU VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY SEQRES 11 A 154 GLY ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER SEQRES 12 A 154 ARG LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 B 154 ACE ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY SEQRES 2 B 154 PRO VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER SEQRES 3 B 154 ASN GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU SEQRES 4 B 154 THR GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY SEQRES 5 B 154 ASP ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE SEQRES 6 B 154 ASN PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU SEQRES 7 B 154 GLU ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP SEQRES 8 B 154 LYS ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL SEQRES 9 B 154 ILE SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR SEQRES 10 B 154 LEU VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY SEQRES 11 B 154 GLY ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER SEQRES 12 B 154 ARG LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN HET ACE A 0 3 HET ACE B 0 3 HET CU A 154 1 HET ZN A 155 1 HET CU B 154 1 HET ZN B 155 1 HETNAM ACE ACETYL GROUP HETNAM CU COPPER (II) ION HETNAM ZN ZINC ION FORMUL 1 ACE 2(C2 H4 O) FORMUL 3 CU 2(CU 2+) FORMUL 4 ZN 2(ZN 2+) HELIX 1 HA GLU A 133 THR A 137 1 5 HELIX 2 HB GLU B 133 THR B 137 1 5 SHEET 1 SA 9 ALA A 4 LYS A 9 0 SHEET 2 SA 9 GLN A 15 GLU A 21 -1 N PHE A 20 O ALA A 4 SHEET 3 SA 9 VAL A 29 LYS A 30 1 N LYS A 30 O GLU A 21 SHEET 4 SA 9 VAL A 94 ASP A 101 -1 SHEET 5 SA 9 GLY A 85 ALA A 89 1 SHEET 6 SA 9 GLY A 41 HIS A 48 -1 N HIS A 43 O VAL A 87 SHEET 7 SA 9 ARG A 115 HIS A 120 1 N VAL A 118 O HIS A 46 SHEET 8 SA 9 CYS A 146 GLY A 150 -1 N GLY A 147 O LEU A 117 SHEET 9 SA 9 ALA A 4 LYS A 9 1 N VAL A 7 O VAL A 148 SHEET 1 SB 9 ALA B 4 LYS B 9 0 SHEET 2 SB 9 GLN B 15 GLU B 21 -1 N PHE B 20 O ALA B 4 SHEET 3 SB 9 VAL B 29 LYS B 30 1 N LYS B 30 O GLU B 21 SHEET 4 SB 9 VAL B 94 ASP B 101 -1 SHEET 5 SB 9 GLY B 85 ALA B 89 1 SHEET 6 SB 9 GLY B 41 HIS B 48 -1 N HIS B 43 O VAL B 87 SHEET 7 SB 9 ARG B 115 HIS B 120 1 N VAL B 118 O HIS B 46 SHEET 8 SB 9 CYS B 146 GLY B 150 -1 N GLY B 147 O LEU B 117 SHEET 9 SB 9 ALA B 4 LYS B 9 1 N VAL B 7 O VAL B 148 SSBOND 1 CYS A 57 CYS A 146 1555 1555 2.10 SSBOND 2 CYS B 57 CYS B 146 1555 1555 2.06 LINK CH3 ACE A 0 N ALA A 1 1555 1555 1.49 LINK C ACE A 0 N ALA A 1 1555 1555 1.85 LINK CH3 ACE B 0 N ALA B 1 1555 1555 1.58 LINK C ACE B 0 N ALA B 1 1555 1555 1.80 LINK ND1 HIS A 46 CU CU A 154 1555 1555 2.05 LINK NE2 HIS A 48 CU CU A 154 1555 1555 2.13 LINK NE2 HIS A 63 CU CU A 154 1555 1555 2.09 LINK ND1 HIS A 63 ZN ZN A 155 1555 1555 2.05 LINK ND1 HIS A 71 ZN ZN A 155 1555 1555 2.13 LINK ND1 HIS A 80 ZN ZN A 155 1555 1555 2.08 LINK OD2 ASP A 83 ZN ZN A 155 1555 1555 1.95 LINK NE2 HIS A 120 CU CU A 154 1555 1555 2.08 LINK ND1 HIS B 46 CU CU B 154 1555 1555 2.15 LINK NE2 HIS B 48 CU CU B 154 1555 1555 2.13 LINK NE2 HIS B 63 CU CU B 154 1555 1555 2.15 LINK ND1 HIS B 63 ZN ZN B 155 1555 1555 2.20 LINK ND1 HIS B 71 ZN ZN B 155 1555 1555 2.16 LINK ND1 HIS B 80 ZN ZN B 155 1555 1555 2.08 LINK OD2 ASP B 83 ZN ZN B 155 1555 1555 2.00 LINK NE2 HIS B 120 CU CU B 154 1555 1555 2.02 SITE 1 CUA 4 HIS A 46 HIS A 48 HIS A 63 HIS A 120 SITE 1 ZNA 4 HIS A 63 HIS A 71 HIS A 80 ASP A 83 SITE 1 CUB 4 HIS B 46 HIS B 48 HIS B 63 HIS B 120 SITE 1 ZNB 4 HIS B 63 HIS B 71 HIS B 80 ASP B 83 SITE 1 AC1 4 HIS A 46 HIS A 48 HIS A 63 HIS A 120 SITE 1 AC2 4 HIS A 63 HIS A 71 HIS A 80 ASP A 83 SITE 1 AC3 4 HIS B 46 HIS B 48 HIS B 63 HIS B 120 SITE 1 AC4 4 HIS B 63 HIS B 71 HIS B 80 ASP B 83 CRYST1 113.570 113.570 71.550 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008805 0.005084 0.000000 0.00000 SCALE2 0.000000 0.010167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013976 0.00000 MTRIX1 1 -0.998800 0.009900 -0.048600 57.20400 1 MTRIX2 1 -0.005600 -0.996200 -0.087200 -32.03400 1 MTRIX3 1 -0.049300 -0.086800 0.995000 0.28400 1 HETATM 1 C ACE A 0 33.042 -11.070 24.499 1.00 8.74 C HETATM 2 O ACE A 0 33.828 -10.864 24.277 1.00 9.48 O HETATM 3 CH3 ACE A 0 32.117 -11.386 24.809 1.00 8.49 C