HEADER ELECTRON TRANSPORT 17-MAR-04 1SPW TITLE SOLUTION STRUCTURE OF A LOOP TRUNCATED MUTANT FROM D. GIGAS TITLE 2 RUBREDOXIN, NMR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUBREDOXIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RD; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO GIGAS; SOURCE 3 ORGANISM_TAXID: 879; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21DE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS TRUNCATED LOOP, ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.M.PAIS,P.LAMOSA,W.DOS SANTOS,J.LEGALL,D.L.TURNER,H.SANTOS REVDAT 4 02-MAR-22 1SPW 1 REMARK REVDAT 3 24-FEB-09 1SPW 1 VERSN REVDAT 2 21-JUN-05 1SPW 1 DBREF REVDAT 1 29-MAR-05 1SPW 0 JRNL AUTH T.M.PAIS,P.LAMOSA,W.DOS SANTOS,J.LEGALL,D.L.TURNER,H.SANTOS JRNL TITL STRUCTURAL DETERMINANTS OF PROTEIN STABILIZATION BY SOLUTES: JRNL TITL 2 THE IMPORTANCE OF THE HAIRPIN LOOP IN RUBREDOXINS JRNL REF FEBS J. V. 272 999 2005 JRNL REFN ISSN 1742-464X JRNL PMID 15691333 JRNL DOI 10.1111/J.1742-4658.2004.04534.X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GLOMSA REMARK 3 AUTHORS : GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SPW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000021900. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303; 313 REMARK 210 PH : 7.6; 7.6 REMARK 210 IONIC STRENGTH : 20 MM NACL; 20 MM NACL REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 4 MM MUTANT PROTEIN; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.1, DYANA 1.4 WITH REMARK 210 MODIFICATIONS, XEASY 1.3.10, REMARK 210 PROCHECK-NMR 3.4.4 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 56.64 164.80 REMARK 500 1 GLU A 18 -45.34 -135.37 REMARK 500 1 PRO A 21 174.87 -47.23 REMARK 500 1 ASP A 22 57.45 -104.97 REMARK 500 1 ASP A 23 71.61 173.54 REMARK 500 1 VAL A 28 -73.13 -133.48 REMARK 500 1 LYS A 33 46.25 -86.52 REMARK 500 2 ASP A 2 98.74 51.54 REMARK 500 2 PRO A 15 131.98 -34.48 REMARK 500 2 ALA A 16 73.52 83.05 REMARK 500 2 PHE A 17 -64.62 -93.28 REMARK 500 2 GLU A 18 -71.19 -178.99 REMARK 500 2 LEU A 20 83.42 38.40 REMARK 500 2 ASP A 22 35.95 -93.73 REMARK 500 2 ASP A 23 43.38 -162.59 REMARK 500 2 VAL A 28 -73.55 -139.60 REMARK 500 2 LYS A 33 49.42 -85.20 REMARK 500 2 LYS A 38 139.11 -39.91 REMARK 500 3 ASP A 2 91.73 44.12 REMARK 500 3 TYR A 11 157.28 -39.93 REMARK 500 3 PRO A 15 107.14 -34.53 REMARK 500 3 ALA A 16 68.21 173.19 REMARK 500 3 ASP A 19 94.79 176.43 REMARK 500 3 PRO A 21 -175.61 -67.71 REMARK 500 3 ASP A 22 55.78 -98.18 REMARK 500 3 ASP A 23 62.93 178.24 REMARK 500 3 VAL A 28 -91.05 -109.11 REMARK 500 3 LYS A 33 40.69 -90.24 REMARK 500 4 TYR A 11 161.29 -41.89 REMARK 500 4 PRO A 15 127.11 -36.29 REMARK 500 4 ALA A 16 -29.25 163.10 REMARK 500 4 PHE A 17 -174.17 -54.41 REMARK 500 4 GLU A 18 -57.23 -127.61 REMARK 500 4 ASP A 19 95.05 -55.95 REMARK 500 4 ASP A 22 53.22 -94.24 REMARK 500 4 ASP A 23 56.36 -179.57 REMARK 500 4 CYS A 26 107.38 -48.65 REMARK 500 4 PRO A 27 -18.97 -48.22 REMARK 500 4 VAL A 28 -90.61 -85.02 REMARK 500 4 ALA A 31 160.97 -47.17 REMARK 500 5 ASP A 2 -59.59 -122.95 REMARK 500 5 PRO A 15 94.99 -36.11 REMARK 500 5 ALA A 16 70.36 -177.25 REMARK 500 5 ASP A 19 93.97 178.94 REMARK 500 5 ASP A 22 55.84 -93.62 REMARK 500 5 ASP A 23 60.85 -178.25 REMARK 500 5 VAL A 28 -92.69 -113.80 REMARK 500 5 ASP A 34 94.90 -46.37 REMARK 500 5 ALA A 35 -28.34 161.70 REMARK 500 6 TYR A 4 71.17 -114.60 REMARK 500 REMARK 500 THIS ENTRY HAS 188 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 17-29 WERE DELETED DBREF 1SPW A 1 16 UNP P00270 RUBR_DESGI 1 16 DBREF 1SPW A 17 39 UNP P00270 RUBR_DESGI 30 52 SEQRES 1 A 39 MET ASP ILE TYR VAL CYS THR VAL CYS GLY TYR GLU TYR SEQRES 2 A 39 ASP PRO ALA PHE GLU ASP LEU PRO ASP ASP TRP ALA CYS SEQRES 3 A 39 PRO VAL CYS GLY ALA SER LYS ASP ALA PHE GLU LYS GLN CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1