HEADER OXIDOREDUCTASE 17-MAR-04 1SPX TITLE CRYSTAL STRUCTURE OF GLUCOSE DEHYDROGENASE OF CAENORHABDITIS ELEGANS TITLE 2 IN THE APO-FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHORT-CHAIN REDUCTASE FAMILY MEMBER (5L265); COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLUCOSE DEHYDROGENASE; COMPND 5 EC: 1.1.1.47; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: D1054.8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS PARALLEL BETA-SHEET OF SEVEN STRANDS IN THE ORDER 3214567; THREE KEYWDS 2 ALPHA-HELICES ON EITHER SIDE OF BETA-SHEET; SEVENTH ALPHA-HELIX ON KEYWDS 3 TOP OF BETA-SHEET, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 4 INITIATIVE, SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS, SECSG, KEYWDS 5 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.SCHORMANN,J.ZHOU,D.MCCOMBS,T.BRAY,J.SYMERSKY,W.-Y.HUANG,C.-H.LUAN, AUTHOR 2 R.GRAY,D.LUO,A.ARABASHI,B.BUNZEL,L.NAGY,S.LU,S.LI,G.LIN,Y.ZHANG, AUTHOR 3 S.QIU,J.TSAO,M.LUO,M.CARSON,SOUTHEAST COLLABORATORY FOR STRUCTURAL AUTHOR 4 GENOMICS (SECSG) REVDAT 6 23-AUG-23 1SPX 1 REMARK REVDAT 5 11-OCT-17 1SPX 1 REMARK REVDAT 4 13-JUL-11 1SPX 1 VERSN REVDAT 3 24-FEB-09 1SPX 1 VERSN REVDAT 2 01-FEB-05 1SPX 1 AUTHOR KEYWDS REMARK REVDAT 1 23-MAR-04 1SPX 0 JRNL AUTH N.SCHORMANN,J.ZHOU,D.MCCOMBS,T.BRAY,J.SYMERSKY,W.-Y.HUANG, JRNL AUTH 2 C.-H.LUAN,R.GRAY,D.LUO,A.ARABASHI,B.BUNZEL,L.NAGY,S.LU,S.LI, JRNL AUTH 3 G.LIN,Y.ZHANG,S.QIU,J.TSAO,M.LUO,M.CARSON JRNL TITL CRYSTAL STRUCTURE OF GLUCOSE DEHYDROGENASE OF CAENORHABDITIS JRNL TITL 2 ELEGANS IN THE APO-FORM: A MEMBER OF THE SDR-FAMILY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 316099.250 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 17064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 834 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2149 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 105 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1759 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 145 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.76000 REMARK 3 B22 (A**2) : 7.51000 REMARK 3 B33 (A**2) : -5.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.06 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.13 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.650 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.280 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.940 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.270 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.140 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 62.52 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE FOLLOWING RESIDUES ARE DISORDERED AND NOT VISIBLE IN THE REMARK 3 ELECTRON DENSITY: REMARK 3 1; 96-108; 199-212; 266-278 REMARK 4 REMARK 4 1SPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000021901. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17897 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : 0.08600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.23900 REMARK 200 R SYM FOR SHELL (I) : 0.23900 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: STARTING MODEL WAS A HOMOLOGY MODEL FROM SWISS REMARK 200 -MODEL BASED ON PDB ENTRIES 1RWB AND 1G6K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 5% ISOPROPANOL, REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.34100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.64350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.07650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.34100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.64350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.07650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.34100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.64350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.07650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.34100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.64350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.07650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A TETRAMER (POINT GROUP SYMMETRY 222) REMARK 300 GENERATED BY THE FOLLOWING 4 OPERATORS: X,Y,Z; -X+1,-Y+1,Z; X,-Y+1, REMARK 300 -Z+1; -X+1,Y,-Z+1 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 64.68200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 89.28700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 64.68200 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 108.15300 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 89.28700 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 108.15300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 96 REMARK 465 ALA A 97 REMARK 465 ILE A 98 REMARK 465 PRO A 99 REMARK 465 ASP A 100 REMARK 465 SER A 101 REMARK 465 GLN A 102 REMARK 465 SER A 103 REMARK 465 LYS A 104 REMARK 465 THR A 105 REMARK 465 GLY A 106 REMARK 465 THR A 107 REMARK 465 ALA A 108 REMARK 465 PHE A 199 REMARK 465 GLY A 200 REMARK 465 SER A 201 REMARK 465 ALA A 202 REMARK 465 MET A 203 REMARK 465 GLY A 204 REMARK 465 MET A 205 REMARK 465 PRO A 206 REMARK 465 GLU A 207 REMARK 465 GLU A 208 REMARK 465 THR A 209 REMARK 465 SER A 210 REMARK 465 LYS A 211 REMARK 465 LYS A 212 REMARK 465 MET A 266 REMARK 465 GLY A 267 REMARK 465 LEU A 268 REMARK 465 HIS A 269 REMARK 465 CYS A 270 REMARK 465 GLN A 271 REMARK 465 ASP A 272 REMARK 465 PHE A 273 REMARK 465 ALA A 274 REMARK 465 LYS A 275 REMARK 465 LEU A 276 REMARK 465 LEU A 277 REMARK 465 HIS A 278 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 32 CB LYS A 32 CG -0.257 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 32 CA - CB - CG ANGL. DEV. = 19.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 4 7.13 82.57 REMARK 500 LEU A 122 -61.80 -122.50 REMARK 500 SER A 147 -134.11 -104.87 REMARK 500 ALA A 196 -155.77 -120.40 REMARK 500 THR A 197 45.50 39.44 REMARK 500 SER A 248 22.73 -142.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: D1054.8 RELATED DB: TARGETDB DBREF 1SPX A 1 278 UNP Q18946 Q18946_CAEEL 1 278 SEQRES 1 A 278 MET THR ARG PHE ALA GLU LYS VAL ALA ILE ILE THR GLY SEQRES 2 A 278 SER SER ASN GLY ILE GLY ARG ALA THR ALA VAL LEU PHE SEQRES 3 A 278 ALA ARG GLU GLY ALA LYS VAL THR ILE THR GLY ARG HIS SEQRES 4 A 278 ALA GLU ARG LEU GLU GLU THR ARG GLN GLN ILE LEU ALA SEQRES 5 A 278 ALA GLY VAL SER GLU GLN ASN VAL ASN SER VAL VAL ALA SEQRES 6 A 278 ASP VAL THR THR ASP ALA GLY GLN ASP GLU ILE LEU SER SEQRES 7 A 278 THR THR LEU GLY LYS PHE GLY LYS LEU ASP ILE LEU VAL SEQRES 8 A 278 ASN ASN ALA GLY ALA ALA ILE PRO ASP SER GLN SER LYS SEQRES 9 A 278 THR GLY THR ALA GLN SER ILE GLU SER TYR ASP ALA THR SEQRES 10 A 278 LEU ASN LEU ASN LEU ARG SER VAL ILE ALA LEU THR LYS SEQRES 11 A 278 LYS ALA VAL PRO HIS LEU SER SER THR LYS GLY GLU ILE SEQRES 12 A 278 VAL ASN ILE SER SER ILE ALA SER GLY LEU HIS ALA THR SEQRES 13 A 278 PRO ASP PHE PRO TYR TYR SER ILE ALA LYS ALA ALA ILE SEQRES 14 A 278 ASP GLN TYR THR ARG ASN THR ALA ILE ASP LEU ILE GLN SEQRES 15 A 278 HIS GLY ILE ARG VAL ASN SER ILE SER PRO GLY LEU VAL SEQRES 16 A 278 ALA THR GLY PHE GLY SER ALA MET GLY MET PRO GLU GLU SEQRES 17 A 278 THR SER LYS LYS PHE TYR SER THR MET ALA THR MET LYS SEQRES 18 A 278 GLU CYS VAL PRO ALA GLY VAL MET GLY GLN PRO GLN ASP SEQRES 19 A 278 ILE ALA GLU VAL ILE ALA PHE LEU ALA ASP ARG LYS THR SEQRES 20 A 278 SER SER TYR ILE ILE GLY HIS GLN LEU VAL VAL ASP GLY SEQRES 21 A 278 GLY SER SER LEU ILE MET GLY LEU HIS CYS GLN ASP PHE SEQRES 22 A 278 ALA LYS LEU LEU HIS FORMUL 2 HOH *145(H2 O) HELIX 1 1 ASN A 16 GLU A 29 1 14 HELIX 2 2 HIS A 39 ALA A 53 1 15 HELIX 3 3 SER A 56 GLN A 58 5 3 HELIX 4 4 THR A 69 GLY A 85 1 17 HELIX 5 5 SER A 110 LEU A 122 1 13 HELIX 6 6 LEU A 122 LYS A 140 1 19 HELIX 7 7 PHE A 159 ILE A 181 1 23 HELIX 8 8 GLN A 182 GLY A 184 5 3 HELIX 9 9 PHE A 213 VAL A 224 1 12 HELIX 10 10 GLN A 231 ASP A 244 1 14 HELIX 11 11 ASP A 244 SER A 249 1 6 HELIX 12 12 GLY A 261 ILE A 265 5 5 SHEET 1 A 7 VAL A 60 VAL A 64 0 SHEET 2 A 7 LYS A 32 GLY A 37 1 N VAL A 33 O ASN A 61 SHEET 3 A 7 VAL A 8 ILE A 11 1 N ALA A 9 O THR A 34 SHEET 4 A 7 ILE A 89 ASN A 92 1 O VAL A 91 N ILE A 10 SHEET 5 A 7 GLU A 142 ILE A 146 1 O ILE A 146 N ASN A 92 SHEET 6 A 7 ARG A 186 PRO A 192 1 O ARG A 186 N ILE A 143 SHEET 7 A 7 GLN A 255 VAL A 258 1 O LEU A 256 N SER A 189 CRYST1 64.682 89.287 108.153 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015460 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009246 0.00000