HEADER LYASE 17-MAR-04 1SQ1 TITLE CRYSTAL STRUCTURE OF THE CHORISMATE SYNTHASE FROM CAMPYLOBACTER TITLE 2 JEJUNI, NORTHEAST STRUCTURAL GENOMICS TARGET BR19 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHORISMATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PHOSPHOLYASE; COMPND 5 EC: 4.2.3.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 STRAIN: NCTC 11168; SOURCE 5 GENE: AROC OR CJ1634; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS STRUCTURAL GENOMICS, BIFUNCTIONAL ALPHA/BETA TETRAMERIC PROTEIN, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, NESG, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR F.FOROUHAR,I.LEE,S.M.VOROBIEV,R.XIAO,T.B.ACTON,G.T.MONTELIONE,L.TONG, AUTHOR 2 J.F.HUNT,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 6 11-OCT-17 1SQ1 1 REMARK REVDAT 5 13-JUL-11 1SQ1 1 VERSN REVDAT 4 24-FEB-09 1SQ1 1 VERSN REVDAT 3 25-JAN-05 1SQ1 1 AUTHOR KEYWDS REMARK SOURCE REVDAT 2 18-MAY-04 1SQ1 1 SOURCE REVDAT 1 06-APR-04 1SQ1 0 JRNL AUTH F.FOROUHAR,I.LEE,S.M.VOROBIEV,R.XIAO,T.B.ACTON, JRNL AUTH 2 G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL CRYSTAL STRUCTURE OF THE CHORISMATE SYNTHASE FROM JRNL TITL 2 CAMPYLOBACTER JEJUNI, NORTHEAST STRUCTURAL GENOMICS TARGET JRNL TITL 3 BR19 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 9.5 REMARK 3 NUMBER OF REFLECTIONS : 18999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1802 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 9.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE : 0.3510 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 222 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.024 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2151 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : -1.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 21.00000 REMARK 3 B22 (A**2) : 21.99000 REMARK 3 B33 (A**2) : -43.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.41 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.730 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED WEIGHTED FULL MATRIX LEAST SQUARES REMARK 3 PROCEDURE. REMARK 4 REMARK 4 1SQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-04. REMARK 100 THE DEPOSITION ID IS D_1000021903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97914 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21612 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.18800 REMARK 200 R SYM FOR SHELL (I) : 0.19000 REMARK 200 FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 10MM TRIS (PH 7.5), REMARK 280 5MM DTT, 100MM NACL. WELL SOLUTION: 50MM NAACETATE (PH 4.6), 1M REMARK 280 AMMONIUM SULFATE, 10MM DTT, 25MM OCTANOYLSUCROSE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 36.80000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 169.27950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.63975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.80000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 253.91925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 253.91925 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.63975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 36.80000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 169.27950 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 36.80000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 169.27950 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 36.80000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 253.91925 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 84.63975 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 36.80000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 84.63975 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 253.91925 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 36.80000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 36.80000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 169.27950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 19080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -227.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 73.60000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 73.60000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 338.55900 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 73.60000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 73.60000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 338.55900 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 49 REMARK 465 SER A 50 REMARK 465 LYS A 51 REMARK 465 PHE A 52 REMARK 465 ALA A 53 REMARK 465 THR A 54 REMARK 465 PRO A 55 REMARK 465 ARG A 56 REMARK 465 LYS A 57 REMARK 465 GLU A 58 REMARK 465 SER A 59 REMARK 465 ASN A 84 REMARK 465 GLU A 85 REMARK 465 ASN A 86 REMARK 465 ALA A 87 REMARK 465 HIS A 88 REMARK 465 SER A 89 REMARK 465 LYS A 90 REMARK 465 ASP A 91 REMARK 465 TYR A 92 REMARK 465 ASP A 93 REMARK 465 ASN A 94 REMARK 465 LEU A 95 REMARK 465 LYS A 96 REMARK 465 ASP A 97 REMARK 465 LEU A 98 REMARK 465 PHE A 99 REMARK 465 ARG A 100 REMARK 465 PRO A 101 REMARK 465 ALA A 102 REMARK 465 HIS A 103 REMARK 465 ALA A 104 REMARK 465 ASP A 105 REMARK 465 PHE A 106 REMARK 465 THR A 107 REMARK 465 TYR A 108 REMARK 465 PHE A 109 REMARK 465 TYR A 110 REMARK 465 LYS A 111 REMARK 465 TYR A 112 REMARK 465 GLY A 113 REMARK 465 ILE A 114 REMARK 465 ARG A 115 REMARK 465 ASP A 116 REMARK 465 HIS A 117 REMARK 465 ARG A 118 REMARK 465 GLY A 119 REMARK 465 GLY A 120 REMARK 465 GLY A 121 REMARK 465 ARG A 122 REMARK 465 SER A 123 REMARK 465 SER A 297 REMARK 465 ILE A 298 REMARK 465 PHE A 299 REMARK 465 ALA A 300 REMARK 465 LYS A 301 REMARK 465 GLN A 302 REMARK 465 GLU A 303 REMARK 465 SER A 304 REMARK 465 ILE A 305 REMARK 465 ASP A 306 REMARK 465 LYS A 307 REMARK 465 PHE A 308 REMARK 465 GLY A 309 REMARK 465 ASN A 310 REMARK 465 ASN A 311 REMARK 465 LEU A 312 REMARK 465 LYS A 313 REMARK 465 PHE A 314 REMARK 465 GLU A 315 REMARK 465 LEU A 316 REMARK 465 LYS A 317 REMARK 465 LEU A 361 REMARK 465 LYS A 362 REMARK 465 LEU A 363 REMARK 465 GLU A 364 REMARK 465 HIS A 365 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 78.33 -103.52 REMARK 500 SER A 16 164.63 -49.25 REMARK 500 HIS A 17 -5.13 71.38 REMARK 500 LYS A 33 109.63 -57.74 REMARK 500 SER A 66 -170.14 -170.08 REMARK 500 ALA A 125 172.97 57.58 REMARK 500 ARG A 126 70.90 -107.04 REMARK 500 GLU A 127 -37.05 -34.08 REMARK 500 ASN A 162 49.04 -109.04 REMARK 500 GLU A 166 31.25 -80.11 REMARK 500 LEU A 222 -81.49 98.50 REMARK 500 ASP A 224 39.44 -161.66 REMARK 500 ALA A 239 -7.52 76.00 REMARK 500 LEU A 263 -63.81 -146.35 REMARK 500 LYS A 264 -19.56 59.73 REMARK 500 ASP A 265 -108.17 -122.26 REMARK 500 LEU A 269 -74.52 -75.25 REMARK 500 HIS A 320 -166.55 54.35 REMARK 500 CYS A 323 86.17 -161.57 REMARK 500 SER A 349 32.88 -86.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BR19 RELATED DB: TARGETDB DBREF 1SQ1 A 1 362 UNP Q9PM41 AROC_CAMJE 1 362 SEQADV 1SQ1 MSE A 1 UNP Q9PM41 MET 1 MODIFIED RESIDUE SEQADV 1SQ1 MSE A 28 UNP Q9PM41 MET 28 MODIFIED RESIDUE SEQADV 1SQ1 MSE A 140 UNP Q9PM41 MET 140 MODIFIED RESIDUE SEQADV 1SQ1 MSE A 214 UNP Q9PM41 MET 214 MODIFIED RESIDUE SEQADV 1SQ1 MSE A 235 UNP Q9PM41 MET 235 MODIFIED RESIDUE SEQADV 1SQ1 MSE A 254 UNP Q9PM41 MET 254 MODIFIED RESIDUE SEQADV 1SQ1 MSE A 335 UNP Q9PM41 MET 335 MODIFIED RESIDUE SEQADV 1SQ1 LEU A 363 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 GLU A 364 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 HIS A 365 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 HIS A 366 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 HIS A 367 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 HIS A 368 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 HIS A 369 UNP Q9PM41 CLONING ARTIFACT SEQADV 1SQ1 HIS A 370 UNP Q9PM41 CLONING ARTIFACT SEQRES 1 A 370 MSE ASN THR PHE GLY THR ARG LEU LYS PHE THR SER PHE SEQRES 2 A 370 GLY GLU SER HIS GLY VAL ALA VAL GLY CYS ILE ILE ASP SEQRES 3 A 370 GLY MSE PRO ALA GLY VAL LYS PHE ASP GLU GLU PHE LEU SEQRES 4 A 370 GLN ASN GLU LEU ASP LYS ARG LYS GLY GLY SER LYS PHE SEQRES 5 A 370 ALA THR PRO ARG LYS GLU SER ASP LYS ALA GLN VAL LEU SEQRES 6 A 370 SER GLY VAL PHE GLU GLY TYR THR THR GLY HIS PRO ILE SEQRES 7 A 370 ALA ILE VAL VAL PHE ASN GLU ASN ALA HIS SER LYS ASP SEQRES 8 A 370 TYR ASP ASN LEU LYS ASP LEU PHE ARG PRO ALA HIS ALA SEQRES 9 A 370 ASP PHE THR TYR PHE TYR LYS TYR GLY ILE ARG ASP HIS SEQRES 10 A 370 ARG GLY GLY GLY ARG SER SER ALA ARG GLU SER VAL ALA SEQRES 11 A 370 ARG VAL ALA GLY GLY ALA VAL ALA ALA MSE LEU LEU ARG SEQRES 12 A 370 GLU PHE ASP ILE CYS VAL GLN SER GLY VAL PHE GLY VAL SEQRES 13 A 370 GLY THR PHE VAL SER ASN LEU LYS GLU GLU GLU PHE ASP SEQRES 14 A 370 PHE GLU PHE ALA LYS LYS SER GLU ILE PHE CYS LEU ASP SEQRES 15 A 370 PRO LYS LEU GLU SER ASP PHE LYS ASN GLU ILE LEU ASN SEQRES 16 A 370 ALA ARG ASN SER LYS ASP SER VAL GLY ALA ALA VAL PHE SEQRES 17 A 370 THR LYS VAL SER GLY MSE LEU ILE GLY LEU GLY GLU VAL SEQRES 18 A 370 LEU TYR ASP LYS LEU ASP SER LYS LEU ALA HIS ALA LEU SEQRES 19 A 370 MSE GLY ILE ASN ALA VAL LYS ALA VAL GLU ILE GLY GLU SEQRES 20 A 370 GLY ILE ASN ALA SER LYS MSE ARG GLY SER CYS ASN ASN SEQRES 21 A 370 ASP ALA LEU LYS ASP GLY LYS PHE LEU SER ASN HIS SER SEQRES 22 A 370 GLY GLY ILE LEU GLY GLY ILE SER ASN GLY GLU ASN LEU SEQRES 23 A 370 ILE LEU LYS THR TYR PHE LYS PRO THR PRO SER ILE PHE SEQRES 24 A 370 ALA LYS GLN GLU SER ILE ASP LYS PHE GLY ASN ASN LEU SEQRES 25 A 370 LYS PHE GLU LEU LYS GLY ARG HIS ASP PRO CYS VAL GLY SEQRES 26 A 370 VAL ARG GLY SER VAL VAL ALA SER ALA MSE VAL ARG LEU SEQRES 27 A 370 VAL LEU ALA ASP CYS LEU LEU LEU ASN ALA SER ALA ASN SEQRES 28 A 370 LEU ASN ASN LEU LYS ASN ALA TYR GLY LEU LYS LEU GLU SEQRES 29 A 370 HIS HIS HIS HIS HIS HIS MODRES 1SQ1 MSE A 1 MET SELENOMETHIONINE MODRES 1SQ1 MSE A 28 MET SELENOMETHIONINE MODRES 1SQ1 MSE A 140 MET SELENOMETHIONINE MODRES 1SQ1 MSE A 214 MET SELENOMETHIONINE MODRES 1SQ1 MSE A 235 MET SELENOMETHIONINE MODRES 1SQ1 MSE A 254 MET SELENOMETHIONINE MODRES 1SQ1 MSE A 335 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 28 8 HET MSE A 140 8 HET MSE A 214 8 HET MSE A 235 8 HET MSE A 254 8 HET MSE A 335 8 HET SO4 A 401 5 HET SO4 A 402 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *7(H2 O) HELIX 1 1 GLU A 15 VAL A 19 5 5 HELIX 2 2 ASP A 35 ARG A 46 1 12 HELIX 3 3 GLU A 127 GLU A 144 1 18 HELIX 4 4 LYS A 164 PHE A 168 5 5 HELIX 5 5 ASP A 169 SER A 176 1 8 HELIX 6 6 LEU A 185 SER A 199 1 15 HELIX 7 7 LYS A 225 GLY A 236 1 12 HELIX 8 8 GLU A 247 MSE A 254 5 8 HELIX 9 9 ARG A 255 ASN A 260 1 6 HELIX 10 10 VAL A 324 ASN A 347 1 24 HELIX 11 11 ALA A 348 ALA A 350 5 3 HELIX 12 12 ASN A 351 TYR A 359 1 9 SHEET 1 A 5 THR A 3 PHE A 4 0 SHEET 2 A 5 LYS A 9 PHE A 13 -1 O PHE A 10 N PHE A 4 SHEET 3 A 5 VAL A 21 ASP A 26 -1 O ILE A 24 N THR A 11 SHEET 4 A 5 ILE A 78 VAL A 82 -1 O ILE A 78 N ILE A 25 SHEET 5 A 5 ALA A 62 VAL A 64 -1 N GLN A 63 O VAL A 81 SHEET 1 B 2 VAL A 68 PHE A 69 0 SHEET 2 B 2 TYR A 72 THR A 73 -1 O TYR A 72 N PHE A 69 SHEET 1 C 5 PHE A 159 VAL A 160 0 SHEET 2 C 5 CYS A 148 VAL A 156 -1 N VAL A 156 O PHE A 159 SHEET 3 C 5 ALA A 205 SER A 212 -1 O LYS A 210 N GLN A 150 SHEET 4 C 5 LEU A 286 PHE A 292 -1 O THR A 290 N VAL A 207 SHEET 5 C 5 VAL A 240 ILE A 245 -1 N GLU A 244 O LYS A 289 SHEET 1 D 2 ILE A 276 LEU A 277 0 SHEET 2 D 2 ILE A 280 SER A 281 -1 O ILE A 280 N LEU A 277 LINK C MSE A 1 N ASN A 2 1555 1555 1.32 LINK C GLY A 27 N MSE A 28 1555 1555 1.33 LINK C MSE A 28 N PRO A 29 1555 1555 1.34 LINK C ALA A 139 N MSE A 140 1555 1555 1.33 LINK C MSE A 140 N LEU A 141 1555 1555 1.33 LINK C GLY A 213 N MSE A 214 1555 1555 1.33 LINK C MSE A 214 N LEU A 215 1555 1555 1.33 LINK C LEU A 234 N MSE A 235 1555 1555 1.34 LINK C MSE A 235 N GLY A 236 1555 1555 1.33 LINK C LYS A 253 N MSE A 254 1555 1555 1.33 LINK C MSE A 254 N ARG A 255 1555 1555 1.32 LINK C ALA A 334 N MSE A 335 1555 1555 1.33 LINK C MSE A 335 N VAL A 336 1555 1555 1.33 SITE 1 AC1 5 ASN A 238 ALA A 239 LEU A 277 GLY A 278 SITE 2 AC1 5 LYS A 293 SITE 1 AC2 7 SER A 16 SER A 66 GLY A 67 VAL A 68 SITE 2 AC2 7 THR A 74 HIS A 76 SER A 124 CRYST1 73.600 73.600 338.559 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013587 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013587 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002954 0.00000 HETATM 1 N MSE A 1 48.024 35.946 163.875 1.00 88.66 N HETATM 2 CA MSE A 1 47.023 34.988 164.424 1.00 90.16 C HETATM 3 C MSE A 1 47.178 33.698 163.689 1.00 86.45 C HETATM 4 O MSE A 1 47.228 33.678 162.466 1.00 87.52 O HETATM 5 CB MSE A 1 45.590 35.466 164.208 1.00 97.25 C HETATM 6 CG MSE A 1 45.218 36.685 164.994 1.00108.92 C HETATM 7 SE MSE A 1 46.268 38.204 164.427 1.00126.05 SE HETATM 8 CE MSE A 1 47.517 38.277 165.946 1.00122.44 C